LOCUS GL379589 652272 bp DNA linear CON 16-AUG-2021 DEFINITION Candidatus Regiella insecticola LSR1 genomic scaffold Scaffold1, whole genome shotgun sequence. ACCESSION GL379589 ACYF01000000 VERSION GL379589.1 DBLINK BioProject: PRJNA39723 BioSample: SAMN02471564 KEYWORDS WGS. SOURCE Candidatus Regiella insecticola LSR1 ORGANISM Candidatus Regiella insecticola LSR1 Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; aphid secondary symbionts; Candidatus Regiella. REFERENCE 1 (bases 1 to 652272) AUTHORS Degnan,P.H., Leonardo,T.E., Cass,B.N., Hurwitz,B., Stern,D., Gibbs,R.A., Richards,S. and Moran,N.A. TITLE Dynamics of genome evolution in facultative symbionts of aphids JOURNAL Environ Microbiol 12 (8), 2060-2069 (2010) PUBMED 21966902 REFERENCE 2 (bases 1 to 652272) AUTHORS Degnan,P.H., Gibbs,R.A., Richards,S. and Moran,N.A. CONSRTM International Aphid Genomics Consortium TITLE Direct Submission JOURNAL Submitted (18-AUG-2009) Department of Ecology and Evolutionary Biology, University of Arizona, 1041 E Lowell St, Tucson, AZ 85721-0088, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Atlas v. 2009; Newbler v. 2.0.0 Genome Coverage :: 10.6x Sequencing Technology :: Sanger; 454 FLX ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..652272 /organism="Candidatus Regiella insecticola LSR1" /mol_type="genomic DNA" /submitter_seqid="Scaffold1" /strain="LSR1" /host="Acyrthosiphon pisum" /db_xref="taxon:663321" /geo_loc_name="USA: Ithaca, NY" misc_feature 1..326740 /note="Region: supercontig 1" gene 35..1108 /gene="asd" /locus_tag="REG_0001" CDS 35..1108 /gene="asd" /locus_tag="REG_0001" /inference="protein motif:PFAM:PF01118,PF02774" /note="COG0136; similar to AA sequence EcoGene EG10088; similar to AA sequence GI 123444192" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase" /protein_id="EFL92269.1" /db_xref="PFAM:PF01118" /db_xref="PFAM:PF02774" /translation="MVGSVLMQRMEEENDFEAIEPVFFSTSQKGDKVSVIKSLADTLL EDANDINKLSNMDIIISCQGGDYTNKIYPQLRDSGWQGYWIDAASALRMKDDAIIILD PVNKMLIQQGIDKGIKTFVGGNCTVSLMLMSLGGLFANDLVEWAFVATYQAASGGGAK HMRELLTQMGALHKEVATELQDPASTILDIERKITEKTNSSNLPTDNFGVPLAGSLIP WIDSALQNGQSREEWKGQAETNKILASKNIIPIDGLCVRIGALRCHSQAFTLKLKKDI PLPEIEQLLAEHNKWVKVIPNNREDTMSKLTPAAVTGTLRTPVGRLRKLNMGSKYLSA FTVGDQLLWGAAEPLRRMLRILL" gene complement(1227..1691) /locus_tag="REG_0002" CDS complement(1227..1691) /locus_tag="REG_0002" /note="COG3787; similar to AA sequence EcoGene EG12785; similar to AA sequence GI 77961887" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92270.1" /translation="MNNAESLAEICHFLREQHVLTLCAKRGDDMWCANCFYFFDQDKM ALYLMTEPTTHHAKLMQINPQVVGTIANQPHQIELIKGIQYCGDIAVLTKERDTSIRK RYCHRFPAAKGATTPLWQLCLREIKMTHNALGFAKKLFWRRGSCELVKMKPA" gene complement(1688..2413) /locus_tag="REG_0003" CDS complement(1688..2413) /locus_tag="REG_0003" /inference="protein motif:PFAM:PF03741" /note="COG0861; similar to AA sequence EcoGene EG13092; similar to AA sequence GI 123443523" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="EFL92271.1" /db_xref="PFAM:PF03741" /translation="MFEWIADPNAWLALGTLTILEIILGIDNIIFLSLVVAKLPKAQQ NKARRIGLSAAMLMRLTLLASITWVIGLTKPLFTLAEHAISTRDLILFFGGLFLIWKS TKEIYDSIVGDENYHSSHVSSFASAIIQIMLLDIIFSLDSVITAVGLSDHLFIMMTAV IVAVGVMMFAARPIGEFVNNYPSVKMLALAFLILVGVTLMLESIQVQVPKGYIYFSLF FSISVESLNWLRGRKRNKEEGNK" gene complement(2512..3195) /gene="mutH" /locus_tag="REG_0004" CDS complement(2512..3195) /gene="mutH" /locus_tag="REG_0004" /inference="protein motif:PFAM:PF02976" /note="COG3066; similar to AA sequence EcoGene EG10624; similar to AA sequence GI 77963209" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein" /protein_id="EFL92272.1" /db_xref="PFAM:PF02976" /translation="MCNLISVPPLRDENQLLLRAQALSGFTLGELAMKAQWRMPANLK RAKGWVGVLLEFHLGAKAGSKPEQDFADIGIELKTIPVNAQGRALETTFVCVAPLTGN SGVIWESCHLRNKLSRVLWIPVEGERHIPLAERRVGTPLLWSPNAEEEKQLRDDWEEL MDLIVLGNVESIRAHHGEILQLRPKAANGQSLTEAVGKQGQRIMTLPRGFYLKKNFTN KLLSRYFFI" gene 3317..3844 /gene="rppH" /locus_tag="REG_0005" CDS 3317..3844 /gene="rppH" /locus_tag="REG_0005" /inference="protein motif:PFAM:PF00293" /note="COG0494; similar to AA sequence EcoGene EG13091; similar to AA sequence GI 146312913" /codon_start=1 /transl_table=11 /product="dinucleoside polyphosphate hydrolase" /protein_id="EFL92273.1" /db_xref="PFAM:PF00293" /translation="MIDDDGYRPNVGIVICNQQGQVLWARRCGQHSWQFPQGGINADE TPEQAMYRELFEEVGLSKKNVRILASTRSWLRYKLPKRLVRWDTKPVCVGQKQKWFLL QLTSDDSNINMQRSNPPEFDGWLWVSYWYPVRQVVSFKRDVYRRVMKEFAATVITTQL MPALSIPTTSLQKKY" gene complement(4235..5146) /gene="rbsB" /locus_tag="REG_0006" CDS complement(4235..5146) /gene="rbsB" /locus_tag="REG_0006" /note="COG1879; similar to AA sequence EcoGene EG10815; similar to AA sequence GI 77961836" /codon_start=1 /transl_table=11 /product="D-ribose transporter subunit RbsB" /protein_id="EFL92274.1" /translation="MKINKWVTFFIFNFALSTQAMAKDTIALVVSTLNNPFFISLIEG AQKEAYQRGYELEVFDSKNNSATELXXXXXXXXXXHSLISRIDVKFLLISTVNSNAVG NSIKLANEANIPIITLDRVAHQVKIKSHITSDNVLGSKMAGDFIARKLGDGAKVIQLE GIAVSSGVRQRAEGFKQSIKQHKFNLLASQPAYYDRTDGMHVTQELLATYPQVQAVFA QNDEMALGALHTLQNLGRTDVLVVGFDGTNDAVKAVENGEMAATIAQQPEKIGAKGVE MADKVLKGEKIPRLILVDLKLVTQKTP" assembly_gap 4910..4938 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(5358..7226) /gene="kup" /locus_tag="REG_0007" CDS complement(5358..7226) /gene="kup" /locus_tag="REG_0007" /inference="protein motif:PFAM:PF02705" /note="corrected polynucleotide track (1), low coverage; COG3158; similar to AA sequence EcoGene EG11541; similar to AA sequence GI 51594365" /codon_start=1 /transl_table=11 /product="potassium transporter" /protein_id="EFL92275.1" /db_xref="PFAM:PF02705" /translation="MNTERKQSLLAITLSTIGIVFGDIGTSSLYTLRECFSSHYALDV CPDVVFGFLSLIFWLFVLSVSLKYLTFVMRADNAGEGGILTLMLLSGRNTSERITAKL VTIGLIGASFFYGEVVITPAMSVMSAIEGLEIIAPSLQHYILPCSIAVLTLLFAIQKK GTAKVGKLFAPVMLIWFLTLGVLGLRSIIANPEVLNALHPKWAVTFFINYKIVSFFAL GSVVLAVTGVEALYTDMGHFGKRSILLGWFILVFPSLVLNYFGQGALLLKNPEAVRNP FFLLAPDWAMIPLLILATLATVIASQAVISGVFSLTRQAVHLGYLPPMRIINTSEIEA GQIYIPIINWLLYIAVVFVILGFGHSSNLANAYGIAVTGTMVITSVLFCTVIFKNWHW HRLVVIVLLLLLLSIDIPLFAANALKFFSGGWLPLMLGLVMFTIMTTWKNGQVCLLRR MHEHGNSLNAMITSLEKSPPMSVPGTAVYMSRAANVIPCALLCNLKHNKVLHERIILL TLHTEDTPYIHNIRRVTIKKLSPTFFQICARYGFKETPNVEEIFYLCGLEDLSCQVIE TSFFMSYESIFLTKRPWYLSFRSKLFILLKRNALRASDQFEIPPNRVIELSIQVRI" gene 7731..8171 /gene="mioC" /locus_tag="REG_0008" CDS 7731..8171 /gene="mioC" /locus_tag="REG_0008" /inference="protein motif:PFAM:PF00258" /note="COG0716; similar to AA sequence EcoGene EG11199; similar to AA sequence GI 123440404" /codon_start=1 /transl_table=11 /product="FMN-binding protein" /protein_id="EFL92276.1" /db_xref="PFAM:PF00258" /translation="MPNITLITGSTLGNAEDFAEYLTEKLQLAGFSTTLLHGPNLDEL HLSGQWLVITSTHGAGELPDNLQLLSTQIKQQKPDLSQVYFGAIGLGDSSYDQFCGAI KKLEQQLIARGAIQMGEKLEIDVAKYPIPEIAAEKWLIDWMAKF" gene 8587..10380 /gene="gidA" /locus_tag="REG_0009" CDS 8587..10380 /gene="gidA" /locus_tag="REG_0009" /inference="protein motif:PFAM:PF01134" /note="glucose-inhibited cell-division protein; COG0445; similar to AA sequence EcoGene EG10375; similar to AA sequence GI 77961825" /codon_start=1 /transl_table=11 /product="tRNA uridine 5-carboxymethylaminomethyl modification enzyme" /protein_id="EFL92277.1" /db_xref="PFAM:PF01134" /translation="MFCPEQFDVIIIGGGHAGTEAAMASARMGCQTLLLTHNIETLGE MSCNPAIGGIGKGHLVKEIDALGGLMGKAIXXXXXXXXXXEDLIIENNSVAGAVTKTG QRFRAKTVILTVGTFLDGKIHIGLENHSGGRAGDPASITLSHRLKELPLRVNRLKTGT PPRIDAKTIDFSQLTVQLGDTPIPNFSFLDHLTQRPKQIACHITHTNKKTHEIIRNNL DRSPMYTGEIEGIGPRYCPSIEDKVVRFADRDTHQIFLEPEGLNSNEIYPNGISTSLP LDTQINLIHSIKGMENARIIRPGYAIEYDYFDPRDLKNTLESKHLHGLFFAGQINGTT GYEEAAAQGLLAGLNAARLAKGKESWSPRRDEAYLGVLVDDLSTLGTKEPYRMFTSRA EYRLMLREDNADLRLTKIGRGLGLVDDDRWKHYCEKVEKIEKERQRLRNTWVSPHSPH ITQLNKLLKTPLSKEANGEELLRRPEINYHNLTALNLFGPALQDYQAAAQVEIQTKYQ GYIERQQEEITKQLRNENTKLSINTNYHEIPGLSNEVIAKLNDHKPHSIGQASRISGI TPAAISILLIWLKNKVYCAAVLNLNTFLYKD" assembly_gap 8810..8836 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 10401..10970 /gene="gidB" /locus_tag="REG_0010" CDS 10401..10970 /gene="gidB" /locus_tag="REG_0010" /note="COG0357; similar to AA sequence EcoGene EG10376; similar to AA sequence GI 157373140" /codon_start=1 /transl_table=11 /product="glucose-inhibited cell-division protein B" /protein_id="EFL92278.1" /translation="MLKKLEYLLATAKITLSDKQKQQLIHYVLLLDKWNKTYNLTSVR DPQQILIRHIMDSIVVKPYLKGEQFIDVGTGAGLPGIPLAIVCPDIHFTLLDSLGKRV RFXXXXXXXXXXHGVISRAFASITDMLSCCHHLVDKNKGHFYALKGKKPNEELMNISK RMATVLSINKLSVPELAEERHLIILQLQA" assembly_gap 10713..10742 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 11676..12494 /gene="atpB" /locus_tag="REG_0011" CDS 11676..12494 /gene="atpB" /locus_tag="REG_0011" /note="important for FO assembly; COG0356; similar to AA sequence EcoGene EG10099; similar to AA sequence GI 22128009" /codon_start=1 /transl_table=11 /product="membrane-bound ATP synthase, F0 complex, subunit a" /protein_id="EFL92279.1" /translation="MSGETPSQQAYISHHLNHLQLDLRNFELINPHSVDPVSFWTLNI DSLFFSLVLGILFLLVFRKIAVNATSGVPGKLQTVIELIVGFVDSNVKDMYQGKSKVI APLALTVFVWVVLMNTMDLLPIDFLPYIAEHIFGLPSLRVVPSADVSITLSMALGVFA LILFYSIKMKGSCGFIKELTLQPFNHPLFIPVNIILEGVSLLSKPISLGLRLFGNMYA GELIFILIAGLLPWWSQWLLSVPWAIFHILIIALQAFIFMVLTIVYLAMASEEH" gene 12660..12899 /gene="atpE" /locus_tag="REG_0012" CDS 12660..12899 /gene="atpE" /locus_tag="REG_0012" /note="COG0636; similar to AA sequence EcoGene EG10102; similar to AA sequence GI 213620859" /codon_start=1 /transl_table=11 /product="membrane-bound ATP synthase, F0 complex, subunit c" /protein_id="EFL92280.1" /translation="MENLNMDMLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA" gene 12960..13436 /gene="atpF" /locus_tag="REG_0013" CDS 12960..13436 /gene="atpF" /locus_tag="REG_0013" /note="COG0711; similar to AA sequence EcoGene EG10103; similar to AA sequence GI 188535587" /codon_start=1 /transl_table=11 /product="membrane-bound ATP synthase, F0 complex, subunit b" /protein_id="EFL92281.1" /translation="MNLNATIVGQAIAFFLFVIFCMKYVWPPLIEAIEKRQKEIADSI ASAERAKKDLDLAQANMTEQLQKAKEQAQVIIEQANKRKVQILENAKVEAEQERKKII MQAQAEIDADRKRAYEELRKQIAGLAIAGAERIINCSVNETINRTLVDTMVAELEQ" gene 13445..13978 /gene="atpH" /locus_tag="REG_0014" CDS 13445..13978 /gene="atpH" /locus_tag="REG_0014" /note="corrected polynucleotide track (1), low coverage; COG0712; similar to AA sequence EcoGene EG10105; similar to AA sequence GI 77961819" /codon_start=1 /transl_table=11 /product="membrane-bound ATP synthase, F1 complex, delta subunit" /protein_id="EFL92282.1" /translation="MFEFTTVARPYAKAAFDFAVEHKTVEYWQDMLTFAAQVTYDESI TSLLSGALAPETMAKIFIAAYGDQLSEPAQNFIRVMAEKNRLLVFPEVLAQFIQLRDS LESTVDVEICSAMPLNDQQKKKIAVVMEKQLSRKVKLNCKIDSSVIAGVIIRAGDMVI DGSVGDRLRRLSDVLQS" gene 13993..15534 /gene="atpA" /locus_tag="REG_0015" CDS 13993..15534 /gene="atpA" /locus_tag="REG_0015" /note="COG0056; similar to AA sequence EcoGene EG10098; similar to AA sequence GI 77977934" /codon_start=1 /transl_table=11 /product="membrane-bound ATP synthase, F1 complex, alpha subunit" /protein_id="EFL92283.1" /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIISVSDGIIRIHGL ADVMQGEMIALPGNSYAMALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGSG LLGRVINTLGEPIDGKGPIENDGFSAVEAIAPGVIDRQSVNESVQTGYKSVDAMVPIG RGQRELIIGDRQTGKTALAIDAIINQRHSDIKCVYVAIGQKASTVANVVRKLEEHDAL ANTIVVVATASESAALQYLAPYSGCAMGEYFRDRGENALIVYDDLSKQAVAYRQISLL LRRPPGREAYPGDVFYLHSRLLERAARVNADYVTAFTKGKVKGKTGSLTALPIIETQA GDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGGAAQTQIIKKLSGG IRTALAQYRELAAFSQFASDLDDTTRKQLNHGQKVTELLKQKQYGPMSVAQQSLVLFA AEEGYLADIDLTMIGNFETALFAFTDREYPQFLQKINQTGEYNDQIKGELKNILDESK TNQSW" gene 15755..16633 /gene="atpG" /locus_tag="REG_0016" CDS 15755..16633 /gene="atpG" /locus_tag="REG_0016" /inference="protein motif:PFAM:PF00231" /note="COG0224; similar to AA sequence EcoGene EG10104; similar to AA sequence GI 77973801" /codon_start=1 /transl_table=11 /product="membrane-bound ATP synthase, F1 complex, gamma subunit" /protein_id="EFL92284.1" /db_xref="PFAM:PF00231" /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQERMASCRP YAEAIRSVIGHLALGNLEYKHPYLEERDVKHLGYLVVSTDRGLCGGLNTNLFKKLLAD MQTWSDKGVKCSLALIGTKAVSFFSSFAGNSLANNIVAEVTGMGDNPSLSELIGPVKV MLQAYDEGRLDKLYIVNNKFINTMSQEPQIVQLLPLVPEKDSELKKKSWDYLYEPDPK VLLDTLLRRYLESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQA SITQELTEIVGGASAV" gene 16908..18296 /gene="atpD" /locus_tag="REG_0017" CDS 16908..18296 /gene="atpD" /locus_tag="REG_0017" /note="COG0055; similar to AA sequence EcoGene EG10101; similar to AA sequence GI 77961816" /codon_start=1 /transl_table=11 /product="membrane-bound ATP synthase, F1 complex, beta subunit" /protein_id="EFL92285.1" /translation="MATGKIIQVIGAVVDVEFDQKRVPKVYSALEVDLKDSAAKLVLE VQQQLGGGVVRCIVMGSSDGLRRGLKVTDLAHPIEVPVGAATLGRIMNVLGDPIDMKG PIGEKERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTV NMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMDSNVLDKVSLVYGQMNEPPGN RLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE EMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIY PAVDPLDSTSRQLDPLVVGQEHYNVARGVQSILQRYQELKDIIAILGMDELSEEDKLV VSRARKIQRFLSQPFFVAEVFTGSPGKFVSLKDTIRGFKGIMNGDYDHLPEQAFYMVG TIEEAVEKAKKL" gene 18312..18740 /gene="atpC" /locus_tag="REG_0018" CDS 18312..18740 /gene="atpC" /locus_tag="REG_0018" /inference="protein motif:PFAM:PF02823" /note="mitochondrial delta subunit; COG0355; similar to AA sequence EcoGene EG10100; similar to AA sequence GI 77958185" /codon_start=1 /transl_table=11 /product="membrane-bound ATP synthase, F1 complex, epsilon subunit" /protein_id="EFL92286.1" /db_xref="PFAM:PF02823" /translation="MAVTTYRLDVVSAEKRMFSGVVQKIQVTGSEGELGIFPGHAPLL TAIKPGMVRIVKQCGDEAFIYLSGGLLEVQPNVVIVLADTAIRGEDLDETKALEAKQK AETHIGHSHSDVDYAQVSAELAKAIAKLRVIELIKKSSMG" gene 18886..19416 /gene="ispZ" /locus_tag="REG_0019" CDS 18886..19416 /gene="ispZ" /locus_tag="REG_0019" /inference="protein motif:PFAM:PF04279" /note="COG2917; similar to AA sequence EcoGene EG11122; similar to AA sequence GI 22125932" /codon_start=1 /transl_table=11 /product="putative membrane protein invovled in intracellular septation" /protein_id="EFL92287.1" /db_xref="PFAM:PF04279" /translation="MKQLVDFLPLVVFFVFYKIYDIFVASAALVVATVFALIFTWMKY RQVEKMALISALMVVIFGSLTFAFQSDLFIKWKVTVIYILFSVILLVSQLILKKSLIQ QILGKELILPNRVWSKLNLSWALFFLICGVINLYVAFWLPQEVWVNFKVFGLTLLTLL FTVISGIYIYRHMPKK" gene complement(19492..19788) /gene="priC" /locus_tag="REG_0020" CDS complement(19492..19788) /gene="priC" /locus_tag="REG_0020" /note="COG3923; similar to AA sequence EcoGene EG10765; similar to AA sequence GI 123443304" /codon_start=1 /transl_table=11 /product="primosomal replication protein N''" /protein_id="EFL92288.1" /translation="MKTEQLLTVLTTQIEALSEKIEPLGNISTQQARFDQVLFNNHGT RLRDYLLEVRKNLAQLKQVVAEQHQQQVAFLAEKLVAQVAALQRELATQVLRKK" gene 19975..20532 /gene="apt" /locus_tag="REG_0021" CDS 19975..20532 /gene="apt" /locus_tag="REG_0021" /inference="protein motif:PFAM:PF00156" /note="COG0503; similar to AA sequence EcoGene EG10051; similar to AA sequence GI 77957233" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="EFL92289.1" /db_xref="PFAM:PF00156" /translation="MMLSPQEKRKLMINNIQNSIKKIPNYPKPGILFRDITSLLANPV AYADSVALLVEPYRDKGITKVVGTEARGFLFSAPVALSLGVGFVPVRKQGKLPRETIR EDYQLEYGTDTLEIHRDSIKPDDKVLVIDYLLATGGTIAATVKLIRRLGGEVNDAAFI IKLSELEGEKNLIDQNICCYSLVSF" gene 20667..20906 /locus_tag="REG_0022" CDS 20667..20906 /locus_tag="REG_0022" /inference="protein motif:PFAM:PF04014" /note="similar to AA sequence EcoGene EG10571" /codon_start=1 /transl_table=11 /product="SpoVT/AbrB domain-containing addiction module" /protein_id="EFL92290.1" /db_xref="PFAM:PF04014" /translation="MSMMFNTRQFCAGNSQAVRIPAEMAFPPKTELVVHREGNRIIVE PREKTLGSIPILLHALNQHVTDSRPEFEETERDWS" gene 20915..21286 /locus_tag="REG_0023" CDS 20915..21286 /locus_tag="REG_0023" /inference="protein motif:PFAM:PF01850" /note="COG1487; similar to AA sequence GI 218663063" /codon_start=1 /transl_table=11 /product="PIN domain-containing addiction module" /protein_id="EFL92291.1" /db_xref="PFAM:PF01850" /translation="MLDTNICIYLIKKFPPEIVSQFDNYRKGEIIISAITWAELCCGI KKDGRDTVEDLISVLDVEPFEIKQATLYGELTSLFPNRKANLDRMIAAHAISLDVTLV TNNVDDFSLYTSAGLRIENWL" gene complement(21570..22280) /gene="phoU" /locus_tag="REG_0024" CDS complement(21570..22280) /gene="phoU" /locus_tag="REG_0024" /note="COG0704; similar to AA sequence EcoGene EG10735; similar to AA sequence GI 123444364" /codon_start=1 /transl_table=11 /product="negative regulator of PhoR/PhoB two-component regulator" /protein_id="EFL92292.1" /translation="MDNFKLNTHISGQFNAELEHIRTEVSKMGGLVEQQLTNAIEAMH NQDSDLANHVIEGDKKVNKMEMDIDEACVRIIAKRQPAASDLRLIMVIIKTISELERI GDMANKICQTALEKFSHQPLLVNLESLGQHTVTMLHDVLDAFARMDLKDALCIYRENK KIDQEYEGIVRQLMTYMMEDPRTIPKVLTALFCARSIERIGDRCQNICEFIFYFVEGQ DLRHQKGEMLEKLLAKDR" gene complement(22298..23067) /gene="pstB" /locus_tag="REG_0025" /note="phosphate transporter subunit B; ATP-binding component; similar to COG1117; similar to GI 77961809; EcoGene EG10783" /pseudo gene complement(23096..23978) /gene="pstA" /locus_tag="REG_0026" /note="phosphate transporter subunit A; membrane component; similar to COG0581; similar to GI 77961810; EcoGene EG10782" /pseudo gene complement(24133..24429) /gene="pstC-2" /locus_tag="REG_0027" /note="phosphate transporter subunit C; membrane component; interrupted by IS element; similar to COG0573; similar to GI 123444367; EcoGene EG10784" /pseudo mobile_element 24455..25397 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene 24599..25354 /locus_tag="REG_0028" /note="ISRin3 putative transposase, pseudogene; similar to COG2801; similar to GI 51596214" /pseudo gene complement(25354..25973) /gene="pstC-1" /locus_tag="REG_0029" /note="phosphate transporter subunit C; membrane compontent; interupted by IS element; similar to COG0573; similar to GI 77973795; EcoGene EG10784" /pseudo gene complement(26187..27254) /gene="pstS" /locus_tag="REG_0030" CDS complement(26187..27254) /gene="pstS" /locus_tag="REG_0030" /inference="protein motif:PFAM:PF01547" /note="COG0226; similar to AA sequence EcoGene EG10734; similar to AA sequence GI 77958181" /codon_start=1 /transl_table=11 /product="phosphate transporter subunit" /protein_id="EFL92293.1" /db_xref="PFAM:PF01547" /translation="MREHMKPLHITVRNLIAVVLSVLILPAFADVNLTGAGATFPSPV YGKWADSYQKETHNKINYQGMGSSAGVKQVIADTVNFGASDAPLSDDKLADKGLFQFP TVIGGVVIVVNLMGIQSNELLLDGTTLADIYLGKVKKWNDPAIVALNPEIKLPNQNIA VVRRADGSGTSFVFTQYLAKVNAEWKEKIGVGSSVNWPTGLGGKGNEGIAAFVQRLSG SIGYVEYAYAKQNNLAYTKLKSADDYPVSPSIESFSAATKTVDWNQSFAQDLTNQPGE NVWPITSTTFILLKKIQKDAVNGLEILKFFDWSYKKGAEQAHALDYATLPTEVVEQIR SAWKTQIKDSKGDVLFKEDFK" gene 27914..28927 /locus_tag="REG_0031" /note="transposase; similar to GI 157371306" /pseudo gene complement(29010..30350) /gene="rhlE" /locus_tag="REG_0032" CDS complement(29010..30350) /gene="rhlE" /locus_tag="REG_0032" /note="COG0513; similar to AA sequence EcoGene EG11235; similar to AA sequence GI 45440809" /codon_start=1 /transl_table=11 /product="RNA helicase" /protein_id="EFL92294.1" /translation="MQLVPIPRGDPSYNILRKLHLTLLLKTGESGASNYMSFDSLGLN ADILRAITEQKYSAPTPIQEKAIPEVLAGRDLMASAQTGTGKTAGFTLPLLQLLSENQ SLIKGRRPVRALILTPTRELAAQIGDNVKNYSEFLKLRSMVVFGGVSINPQMMKLRGG VDILVATPGRLLDLEHQNAVDLAKIEILVLDEADRMLDMGFIHDIRRILAKLPAKRQN LLFSATFSNDIKLLAKKLLNNPAYIEVSPGNTTAKHITQRVHFVDKSRKRQLLSYMIG SQNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVL VATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAECSGEAISLVCVDEHKLL RDIERLLKNEIPRIAIDGYQPDPTIKAEPIQNGRQGRGSSNRGKNKNQTSRSRR" gene complement(30378..30881) /locus_tag="REG_0033" CDS complement(30378..30881) /locus_tag="REG_0033" /inference="protein motif:PFAM:PF01042" /note="COG0251; similar to AA sequence EcoGene EG12524; similar to AA sequence GI 123443949" /codon_start=1 /transl_table=11 /product="endoribonuclease L-PSP domain-containing hypothetical protein" /protein_id="EFL92295.1" /db_xref="PFAM:PF01042" /translation="MRAPGNAGSTSLNRFRKRSIIYRSGINMKHTVKATLNTEEKRTI KTERAPEAIGAYIQGVDLGSLIITSGQLPIDAKTNTIADDIAAQTRQSLENVAAVVEK AGLSVADIVKTTVFVKDLNEFVTMNTAYRLFFEEHQAPFPARSCVEVARLPKDVKIEI EAIAVRR" gene complement(31008..31946) /gene="pyrB" /locus_tag="REG_0034" CDS complement(31008..31946) /gene="pyrB" /locus_tag="REG_0034" /note="COG0540; similar to AA sequence EcoGene EG10805; similar to AA sequence GI 22124081" /codon_start=1 /transl_table=11 /product="catalytic subunit of aspartate carbamoyltransferase" /protein_id="EFL92296.1" /translation="MANPLYQKHIISIKDLSRNELTLVMRMAGSLKQRAQPELLKNKI IASCFFESSTRTRLSFETAIYRLGGSVVGFADSSNISVNKGETLADTIRVISSYVDAI IIRHPQEGSACHAASLSNRVPIINAGDGANQHPSQTLLDLFTIQETQGRLDNLNIAMV GDLKYGRTVHSLTQALAKFCGNHLFFIAPDALAMPADIVKVLDEKAVSYSMHASIEDV LPELDILYMTRIQKERQEGLTDINRKSPFVLSANMLISARQNLKILHPLPRVDEISTE VDETPYAYYFQQASNGIFARQALLALLLNAELVIAD" gene complement(32003..32275) /gene="npr" /locus_tag="REG_0035" CDS complement(32003..32275) /gene="npr" /locus_tag="REG_0035" /inference="protein motif:PFAM:PF00381" /note="COG1925; similar to AA sequence EcoGene EG12147; similar to AA sequence GI 77978710" /codon_start=1 /transl_table=11 /product="phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr)" /protein_id="EFL92297.1" /db_xref="PFAM:PF00381" /translation="MIKKTVEIKNKLGMHARPATRLFELVQKFNAEVILRNESGTTAE ASSVIALLMLDSAQGRQIEVEASGPDEILALRAVIELFDSGFDEDQ" gene complement(32256..33122) /locus_tag="REG_0036" CDS complement(32256..33122) /locus_tag="REG_0036" /inference="protein motif:PFAM:PF03668" /note="COG1660; similar to AA sequence EcoGene EG12146; similar to AA sequence GI 157372603" /codon_start=1 /transl_table=11 /product="P-loop ATPase domain-containing hypothetical protein" /protein_id="EFL92298.1" /db_xref="PFAM:PF03668" /translation="MVLIIVSGRSGSGKSVALHALEDMGFYCVDNLPIVLLPQLVDTL IESNSSAAISIDIRNMPESPETFAQAIKKLPVKFSPKLLFFDADSNTLIRRYSDTRRL HPLSSKDLSLENAIDKENRLLTPLRAVADFIIDTSQISVHELDKKLQTYLGKRKRKLS LNFESFGFKYGLPMNADYVFDVRFLPNPHWDQKLRCMTGLDQPVIDFFEKHIEVRKFI NATGRYLERWLPMLENNNRHYLTVAVGCTGGQHRSVYVTEKLVKHFRSKGKIVQLHHR ALWKNNNDKKNS" gene complement(33536..34036) /gene="ptsN" /locus_tag="REG_0037" CDS complement(33536..34036) /gene="ptsN" /locus_tag="REG_0037" /note="COG1762; similar to AA sequence EcoGene EG11682; similar to AA sequence GI 77973414" /codon_start=1 /transl_table=11 /product="sugar-specific enzyme IIA component of PTS" /protein_id="EFL92299.1" /translation="MKDNMTNDYTMQLHSVLNLECTKILSPEECSSKKRALEIISELA AKQLGLSTQVIFEALLTRERLGSTGIGNGIAIPHGKLKEDTLRAVGVFIRLKQPISFE AIDNQPVDILFALLVSADQCKTHLHMLSLVADKLADKMVCRSLRTVESDEALYRIITE PPLKNT" gene complement(34274..34579) /gene="hpf" /locus_tag="REG_0038" CDS complement(34274..34579) /gene="hpf" /locus_tag="REG_0038" /inference="protein motif:PFAM:PF02482" /note="COG1544; similar to AA sequence EcoGene EG11681; similar to AA sequence GI 50119247" /codon_start=1 /transl_table=11 /product="putative ribosome-associated sigma 54 modulation protein" /protein_id="EFL92300.1" /db_xref="PFAM:PF02482" /translation="MQLNVTGHHHLEITDPLRDFIEKKLSRLERYFDHINQVRVELRV EKTEHIAEATVDVNGGKLHATSEHPKQVHQDMYAAIDCLVDKLACQLKKHKDKLKKR" gene complement(34603..36048) /gene="rpoN" /locus_tag="REG_0039" CDS complement(34603..36048) /gene="rpoN" /locus_tag="REG_0039" /inference="protein motif:PFAM:PF00309" /note="COG1508; similar to AA sequence EcoGene EG10898; similar to AA sequence GI 77957481" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma 54 (sigma N) factor" /protein_id="EFL92301.1" /db_xref="PFAM:PF00309" /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLHLSTAELQQEIQLALVNN PLLEQTNSHVEIDTKETVNPEDFDSLNALEKENIPEELPLDVTWEEMYNTSMSFGMSH YYGNDNDDLPYYQEGNTQSLQDHLMWQVGLTPFSDTAIAISIIDAVDETGYLTVSLED ILATIGDKELTLDEVEAVLKRVQHFDPVGVAARNLRECLLVQLSQCAINTPYLIEARL IVADYLDLLGNHDYRTIIRLSRLKETALKEAIALIQSLDPRPGQSVVSTGTSQYVIPD VILNKKGNDWTVELNTDSLPHLKINQQYAALASAGGGLLNDNDSQYIRSNLQEAKWLI KSLASRHETLLKVARCIVDQQIAFFEQGEESMQPMVLADVASVVQMHESTISRITTQK YLHSPRGIFELKYFFSSHVNTESGGEASSIAIRALIKKLIAGENPIKPLSDSKLTLLL CEQGIIVARRTVAKYRESLSIPPSNQRKRLI" gene complement(36249..37025) /gene="lptB" /locus_tag="REG_0040" CDS complement(36249..37025) /gene="lptB" /locus_tag="REG_0040" /note="COG1137; similar to AA sequence EcoGene EG11680; similar to AA sequence GI 77957480" /codon_start=1 /transl_table=11 /product="putative transporter subunit: ATP-binding component of ABC superfamily" /protein_id="EFL92302.1" /translation="MSNAQISNRLSQPWATTMASLIVTKLAKAYKGRKVVEEVSLTVN SGEIVGLLGPNGAGKTTTFYMIVGIVARDAGCILLDEEDISLLPLHERARRGIGYLPQ EASIFRGLSVYHNLMAVLEIRQDLLAQQRTERAKELMEEFHIAHLHDNLGQSLSGGER RRVEIARALAANPKFILLDEPFAGVDPISVIDIKKIIKHLRGRGLGVLITDHNVRETL DVCERAYIVNRGHLIAQGTPQEILADEQVKRVYLGEEFRL" gene complement(37130..37699) /gene="lptA" /locus_tag="REG_0041" CDS complement(37130..37699) /gene="lptA" /locus_tag="REG_0041" /note="COG1934; similar to AA sequence EcoGene EG12618; similar to AA sequence GI 77978704" /codon_start=1 /transl_table=11 /product="putative transporter subunit: periplasmic-binding component of ABC superfamily" /protein_id="EFL92303.1" /translation="MKISNKIHGILLTGLFLAAFLTVNFPALALSSDSEQPIHITSDT QSLDLPNNVSVFIDNVIIKQGSIEIKANKVVVTRPDGEQKKTVMEGFGTPVTFQQMQD NGKLVTGHGEKLRYQLANQFLVLTGNAYLKQLDSNIEADRITYQVEKQLMEAFSDKNK RVTTVLLPAQLQETKPKPQKNRKTNETKN" gene complement(37683..38273) /locus_tag="REG_0042" CDS complement(37683..38273) /locus_tag="REG_0042" /note="COG3117; similar to AA sequence EcoGene EG12806; similar to AA sequence GI 157372597" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92304.1" /translation="MTKTRIGITLLLIMIALALIGSNFSGFNQQVIQPVDHNLPTYQS QQTVTAVYALDGKLHYRLMAEEVKNYTNSSVNNTALDHSTVTWFTKPVMTLFDENAVG SWEIKADQAKLTDGKMLYLYGHVEVNNLTAISQLQKITTDNAEVNLINQNISSNDDVN LYGVGFTVNGMKMRGNLRNQTVELSEKVKTHYENQQ" gene complement(38283..38819) /gene="kdsC" /locus_tag="REG_0043" CDS complement(38283..38819) /gene="kdsC" /locus_tag="REG_0043" /note="COG1778; similar to AA sequence EcoGene EG12804; similar to AA sequence GI 77957477" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonate 8-phosphate phosphatase" /protein_id="EFL92305.1" /translation="MYTETDYGLVLTKIIECAAKIRLLICDVDGVLSNGLIYMGNQGE ELKAFHVRDGYGIRCLKKSGVEVAIITARNAELVKNRAQTLSIKHLYQGQVDKSLAYK ELLTKLNCQPEQVAYIGDDLIDLPVMNEVGLSVAVADAHPVVRKKVHYITRIAGGQGA VREVCDLILFAQKNATDL" gene complement(38833..39903) /gene="kdsD" /locus_tag="REG_0044" CDS complement(38833..39903) /gene="kdsD" /locus_tag="REG_0044" /note="COG0794; similar to AA sequence EcoGene EG12803; similar to AA sequence GI 22124068" /codon_start=1 /transl_table=11 /product="D-arabinose 5-phosphate isomerase" /protein_id="EFL92306.1" /translation="MLDLTSQPSFITEQGSNMSHVELSSGACFPGNCSEDCCFQQAGK EVLQIERNALAQLDQYINHDFSHACEKIFNCQGKVVVMGIGKSGHIGRKIAATFASTG TPAFFIHPTEASHGDLGMVTSQDIVLAISNSGETGEILSLIPILKRQKILLIAMSGNP KSNMGEVADIHLCIKVPEEACPLGLAPTASTTATLVMGDALAVALLKKRRFTPQHFAL SHPGGLLGRKLLVRVDEIMHIGTEIPQVTLDASLRDALLEITQKKLGLTVICDDQMKI AGVFTDGDLRRVLSDNTFDLNNAKIAEVMTSGGIHISADKLAVEALNLMQSHNITVLL VVEDERLLGVVHMHDLLKAGIV" gene 40108..41088 /gene="mlaF" /locus_tag="REG_0045" CDS 40108..41088 /gene="mlaF" /locus_tag="REG_0045" /note="involved in resistance to organic solvents; COG1127; similar to AA sequence EcoGene EG12801; similar to AA sequence GI 77957474" /codon_start=1 /transl_table=11 /product="ATPase component of phospholipid ABC transporter" /protein_id="EFL92307.1" /translation="MKLRLGGQGVRPMRVDRLRDSANTRRQRRPNLKGEGYNRHQAQQ RRIKMNPLPSNLIEIQNMSFTRRERRIFSDINMTVPRGKITAIMGPSGIGKTTLLRLI GGQLVPDCGMILFNGDNIPTLSRQRLYNARKKMGMLFQSGALFTDLNVFDNVAFPLRE HSSLPDELLHSTVMMKLEAVGLRGAAKMMPSELSGGMARRVALARAIALDPELIMFDE PFGGQDPITMGILVKLIDELNQALGVTCIVVSHDVKEILSIADYAYIIADQRVIAEGT ATQLQNNHNQQVRQFLDGIADGPIPFRFPADDYKIELLKKHKHQYYKNTR" gene 41269..42051 /gene="mlaE" /locus_tag="REG_0046" CDS 41269..42051 /gene="mlaE" /locus_tag="REG_0046" /note="involved in resistance to organic solvents; COG0767; similar to AA sequence EcoGene EG12800; similar to AA sequence GI 22124065" /codon_start=1 /transl_table=11 /product="permease component of phospholipid ABC transporter" /protein_id="EFL92308.1" /translation="MLVKALASLGGKAIDVCTSFGRAGWMLFHALVGKPEPRKQWPLL VKQLHNLGTQSLSIIVVSGLFIGMVLGLQGYLILMTYSAEASLGMMVALSLLRELGPV ITALLFAGRAGSALTAEIGLMKATEQLASLEMMAIDPLRRVIAPRFWAGVISMPLLMA IFIAVGIVGGAIVGVDWKGIDAGFFWSAMQNAIEWRVDLINSLIKSLVFTVAVTWIAL FNGYDALPTSEGISQATTRTVVYSSLAVLGLDFVLTTLMFGN" gene 42055..42570 /gene="mlaD" /locus_tag="REG_0047" CDS 42055..42570 /gene="mlaD" /locus_tag="REG_0047" /note="Cinvolved in resistance to organic solvents; OG1463; similar to AA sequence EcoGene EG12799; similar to AA sequence GI 22124064" /codon_start=1 /transl_table=11 /product="periplasmic component of phospholipid ABC transporter" /protein_id="EFL92309.1" /translation="MQTKKSEIGVGLFVLVAFIAVIFLCLKVADIKSIGNQSTYRIYA IFNNVGGLKINSPVKIGGVVIGRVADISLDKKNYNPRVAIDIQENYNHIPNSSSLAIR TAGLLGEQFLALNVGFEDQEMGTGILKAGDTIEDTKSALILEDLIGQLIYKKDDNNTV ANSATSTQGGF" gene 42533..43210 /gene="mlaC" /locus_tag="REG_0048" CDS 42533..43210 /gene="mlaC" /locus_tag="REG_0048" /note="involved in resistance to organic solvents; COG2854; similar to AA sequence EcoGene EG12798; similar to AA sequence GI 123443932" /codon_start=1 /transl_table=11 /product="auxiliary component of phospholipid ABC transporter" /protein_id="EFL92310.1" /translation="MPIPQHQPRGDFEMIRARMLKYLLMMTLLLVTPLASAVDKTNPY RLMEDVAQRTFDRLKNEQSKIKQNPNYLRTIVREELIPAVQIKYAGALVLGPYYKEAT KAELDDYFGAFEKYLEQSYAQALTMYQGQTYKISPEQPLDREIIPIRVEIVDPNGRPP IRLDFQWRRNTQTGYWQAFDMIVEGVSMIQTKKSGWDSILQQTGIQGLTKALNASSKQ EIKLNKK" gene 43231..43527 /gene="mlaB" /locus_tag="REG_0049" CDS 43231..43527 /gene="mlaB" /locus_tag="REG_0049" /note="COG3113; similar to AA sequence EcoGene EG12797; similar to AA sequence GI 77973401" /codon_start=1 /transl_table=11 /product="cytoplasmic protein with a STAS domain" /protein_id="EFL92311.1" /translation="MIGKLNWQLQTNSLLLQGDLDRDTLLPLWQQRNKLLTDIDCIDV TQLHRVDSAGLALLVHLIHFKSQQQNIKLAISGISDQLATLIKLYNLPGRDLTH" gene 43843..44115 /gene="bolA_2" /locus_tag="REG_0050" CDS 43843..44115 /gene="bolA_2" /locus_tag="REG_0050" /inference="protein motif:PFAM:PF01722" /note="COG5007; similar to AA sequence EcoGene EG12796; similar to AA sequence GI 22124061" /codon_start=1 /transl_table=11 /product="putative transcriptional regulatorin BolA superfamily" /protein_id="EFL92312.1" /db_xref="PFAM:PF01722" /translation="MNIIIDAAKVKELLMQAEALSLQEAHVSVEGSHFQVTVISEVFT DMNLRQKHQAVYTVLAEYIAKGSMHAVSIKAYTPQEWQRDRKLNGF" gene 44285..45625 /gene="murA" /locus_tag="REG_0051" CDS 44285..45625 /gene="murA" /locus_tag="REG_0051" /inference="protein motif:PFAM:PF00275" /note="COG0766; similar to AA sequence EcoGene EG11358; similar to AA sequence GI 77977076" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine enolpyruvyl transferase" /protein_id="EFL92313.1" /db_xref="PFAM:PF00275" /translation="MEKFQVEGVACLTGEVTISGAKNAALPILFASLLAEKPVELQNI PHLKDIDTTIKLLRRLGVKIERNGSVFVDASQVNKFRAPYELVKTMRASIWALGPLVA RFGKGEVSLPGGCAIGARPVDLHIDGLKSLGVEIKLEDGYVKASVDGRLKGAHIKMKA VSVGATVTIMSAATLAEGITKIENAAREPEIVDTANFLNMLGAKISGAGTDSITIEGV NSLSRGGVYSILPDRIETGTFLVAAAISRGKIVCHNTCADTLEAVLAKLSDAGASIEI DKDKKQISLDMHGKRPKAVTLCTAPHPGFPTDMQAQFSLLNLVAEGRGVITETIFENR FMHVPELVRMGAKAEIKHNSVICCGVEKLSGAQVMATDLRASASLVLAACIAEGETTI DRIYHIDRGYEKIEDKLSKLGANIKRIKDVKLPAIPFASEVAARQPGRETDERR" gene complement(46172..46378) /gene="csrA" /locus_tag="REG_0052" CDS complement(46172..46378) /gene="csrA" /locus_tag="REG_0052" /inference="protein motif:PFAM:PF02599" /note="possibly regulates swarming and quorum sensing; COG1551; similar to AA sequence EcoGene EG11447; similar to AA sequence GI 157881049" /codon_start=1 /transl_table=11 /product="Carbon storage regulator" /protein_id="EFL92314.1" /db_xref="PFAM:PF02599" /translation="MLILTRRVGERIVIGNEPVEEDNIIVTVLGTKGGQIRIGVNAPK NVPVHREEIYQRIQAEKSQQDVSE" gene 46498..46845 /locus_tag="REG_0053" CDS 46498..46845 /locus_tag="REG_0053" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92315.1" /translation="MLLTDTSLVELNNFALKFILARICEKTLPWNFFQSIDTASISTL LAFEFGRIAKEKLSIQRLISGNISPLRAYSKSLVLADTSSTTNSKCSFTLCKMCFFRS FFSQLIIAKEDCE" gene complement(47214..47290) /locus_tag="REG_0054" /note="tRNA-Arg2" tRNA complement(47214..47290) /locus_tag="REG_0054" /product="tRNA-Arg" gene complement(47300..47392) /locus_tag="REG_0055" /note="tRNA-Ser1" tRNA complement(47300..47392) /locus_tag="REG_0055" /product="tRNA-Ser" gene 47695..48273 /gene="spr" /locus_tag="REG_0056" CDS 47695..48273 /gene="spr" /locus_tag="REG_0056" /inference="protein motif:PFAM:PF00877" /note="COG0791; similar to AA sequence EcoGene EG14076; similar to AA sequence GI 123441757" /codon_start=1 /transl_table=11 /product="putative outer membrane lipoprotein" /protein_id="EFL92316.1" /db_xref="PFAM:PF00877" /translation="MIVPGDSSTMVKSQILTKYILQIIPLIVATIMLSACSTPQKSNS HASWKNTRYVPYNSQNTFETRFIKSKILKQYTGWKAVRYRFGGSSKKGIDCSAFVQLT FREQFGINLPRSTSAQQTVGKKIQRIKLKAGDLVLFRAGPTGRHIGIYLDNNKFVHVS ATTGVTISSLNDQYWKKRYHTGRRVLHNSNRD" gene 48445..48744 /gene="rplY" /locus_tag="REG_0057" CDS 48445..48744 /gene="rplY" /locus_tag="REG_0057" /inference="protein motif:PFAM:PF01386" /note="COG1825; similar to AA sequence EcoGene EG10885; similar to AA sequence GI 77962646" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L25 (general stress protein Ctc)" /protein_id="EFL92317.1" /db_xref="PFAM:PF01386" /translation="MITINATVRDVKDQVKGASRRLRAKNKFPAVVYGGTEQAISIVL EQDVITNLESKPGFYGEPLTLMIDDKANNVKVQAVQRHPFKPKFTHIDFMRVYTQ" gene 49161..49850 /gene="phoB" /locus_tag="REG_0058" CDS 49161..49850 /gene="phoB" /locus_tag="REG_0058" /inference="protein motif:PFAM:PF00072" /note="COG0745; similar to AA sequence EcoGene EG10728; similar to AA sequence GI 22124885" /codon_start=1 /transl_table=11 /product="Response regulator with a CheY-like receiver domain and a winged-helix DNA-binding domain" /protein_id="EFL92318.1" /db_xref="PFAM:PF00072" /translation="MTKRILVVEDEVAIREMLCLLLQQNGYQPLAAENYGNAVASLTG LLPDLVLLDWMLPGGSGIQFIQHIRREMLTRSIPVIMLTARGEEEDRVCGLELGADDY ITKPFSPKEVVARVRAMIRRIVPTTTKEIIEIQGLILDPSSHRVIANEQVLAMGPTEF KLLHFFMARPERVYNREQLLNYVWGTNVYVEDRTVDVHIRRLRKVLEKNGHDKMIQTV RGAGYRFSTCY" gene 50115..51395 /gene="phoR" /locus_tag="REG_0059" CDS 50115..51395 /gene="phoR" /locus_tag="REG_0059" /note="COG0642; similar to AA sequence EcoGene EG10733; similar to AA sequence GI 77976368" /codon_start=1 /transl_table=11 /product="Signal transduction histidine kinase" /protein_id="EFL92319.1" /translation="MLKRLSWKRLALELIFFCLPALLIGIFVGYLPWCLLISVLTALT WNFYNQLRLSDWLWLERSMTPPRGYGNWESLFYGLHQMQLRNRKRRRELALLIKRFRS GAGSLPDAVVIITVDGHILWCNQLAQQLLEFRWPEDNGQHILNLLRYPEFNDYISQQE FLWPLTLQLNNSHHVEFRVMPYSAGQWLLVARDVTQMIQLESTRRIFFANVNHELRTP LTVLQGYLEMMHDQPLERAIQNKILVTMQEQTKRMDVLVKQLLMLSRIEAAPTTINMN EVVDIPIILQELQHEIAAIKTATNNRHHQITFHVDPQLKILGNKDQLSSAISNLVYNA INHTPAGTKIEIHWQLTSQGAQFQINDNGRGIAAEHLPRLTERFYRVDDARSRETGGN GLGLAIVKHTLNHHDSYLDILALARISPLFCPNG" gene 52061..52927 /locus_tag="REG_0060" CDS 52061..52927 /locus_tag="REG_0060" /inference="protein motif:PFAM:PF00126" /note="COG0583; similar to AA sequence GI 22126040" /codon_start=1 /transl_table=11 /product="lysR domain-containing putative transcriptional regulator" /protein_id="EFL92320.1" /db_xref="PFAM:PF00126" /translation="MFLSRKFEAFMTVVENGSLSKAAKVMNRTTPPIAKSIKDFECTI GKKLFKREKFGMRLTNEGTALYHDLKNLYQQEKEITKKYLTSHITNTINIYYDWGKEK ILSEIFKVAETNNIHTNIFRLNSESINDIPDYYGNILILTSEKIICERFSLLKEVQDF DFGIYARKDIINKSEDVMSLLHENIWLCNPALFKSQFIRSLEERVTNNVSKVNIRQID NTTCCLKSIHTGRYICITNSMMDDFDGDSKIAFLHFTKEIFGKNNLYFYKSKSHSSVL NKIINYIENLNQ" gene complement(53053..53457) /locus_tag="REG_0061" CDS complement(53053..53457) /locus_tag="REG_0061" /note="COG3012; similar to AA sequence EcoGene EG12119; similar to AA sequence GI 77972687" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92321.1" /translation="MENVLSICCPCGSTLEYNICCEPYITGKKIASEPGILMRSRYSA YVKCNVDYLIISWHSDCHPENFRNTLIQKERKWHGLTVIEESVGSHIDEGFVEFSACF TDKNTAKKITIHERSRFLRVNKCWYYIDGIFK" gene 53901..54914 /gene="rssB" /locus_tag="REG_0062" CDS 53901..54914 /gene="rssB" /locus_tag="REG_0062" /inference="protein motif:PFAM:PF00072" /note="similar to AA sequence EcoGene EG12121; similar to AA sequence GI 123442499" /codon_start=1 /transl_table=11 /product="response regulator of RpoS" /protein_id="EFL92322.1" /db_xref="PFAM:PF00072" /translation="MEKPLASKKILIVEDEIVFRSVLTGYLSSLGASIYQAVNGREAL GLLDLHSLDLILCDISMPEMGGIEFVECLSIQSIKIPVLIISATNKMTDIAQVLRMGA KDVLLKPIVDLARLREAVLECLYADLFTSPALERREFNQDWDELRKNPQKAAQLLLQL QPPVQQKIAQCNINYQQLTMVEQPGLVLDIATLSTDELAFYCLDITKAKENGVLAALL LRVLFNGILQEHLVQKKQRLPQMTALLQQLNQLLRCTHLDGQFPLLLGYYHSKHKNLS LISAGLRANITVDKNKIQLSNGMPLGTLNAAYLNQISQHCCAWECKISGGGSRLRLML STE" gene 55680..57083 /gene="ugd" /locus_tag="REG_0063" CDS 55680..57083 /gene="ugd" /locus_tag="REG_0063" /note="COG1004; similar to AA sequence EcoGene EG13407; similar to AA sequence GI 51596426" /codon_start=1 /transl_table=11 /product="putative UDP-glucose 6-dehydrogenase" /protein_id="EFL92323.1" /translation="MKIMNVTVFGIGYVGLVLAAVMAEVGHDVYCIDIDKEKIENLKK GEIPIYEPGLAVLVDDRLKKGKLHFSTDAAAGVAHGCLLFIAVGTPPDEDGAADLKYV IEVAETIAHHMKTPKTVINKSTVPVGTADKVHDAMQAILQQREEQEKWEKREKISFDV VSNPEFLKEGAAVADCRRPERIVIGADNQNAFKLLRELYAPFNRNRNRIIEMDIRSAE LTKYAANCMLATKISFMNEMASLAESLGADIENVRQGIGSDSRIGHHFIYAGCGYGGS CFPKDIRALIRTASNVDYPAQLLQSVEQINNQQKYKLTELIFKHFGGQQEEKPLKGKI FAVWGLAFKANTDDMREAPSRTVIETLWEAGAAIRAYDPKAMNEALRIYKYHEHCKDL TLAKTKEAALENADALIICTEWQDFRAPDFDEIKGKLGQPIIFDGRNLYNPEQVNRHG ITYYAIGRGASIKQTLE" gene complement(57372..57803) /gene="hns" /locus_tag="REG_0064" CDS complement(57372..57803) /gene="hns" /locus_tag="REG_0064" /inference="protein motif:PFAM:PF00816" /note="COG2916; similar to AA sequence EcoGene EG10457; similar to AA sequence GI 77957073" /codon_start=1 /transl_table=11 /product="global DNA-binding transcriptional dual regulator H-NS" /protein_id="EFL92324.1" /db_xref="PFAM:PF00816" /translation="MNESLKILNNIRTLRAQGRECTLETLQEMLEKLETVVKERREEE DKAKVVQEERARKLSQYREMLISDGIDPNELLASPTPRPSKVKAKEAISKIQKKRAPR PAKYKYIENGEEKTWTGQGRTPAAIKRAIEKEGESLDSFLI" gene complement(58318..59808) /gene="cls" /locus_tag="REG_0065" CDS complement(58318..59808) /gene="cls" /locus_tag="REG_0065" /note="COG1502; similar to AA sequence EcoGene EG11608; similar to AA sequence GI 22125925" /codon_start=1 /transl_table=11 /product="cardiolipin synthase 1" /protein_id="EFL92325.1" /translation="MPAFNRNTPLMITFYTVINWLSLFSYWLLIAGVTLRILMKRRTA PSAMAWLLVIYILPLVGIMTYLLFGELHLGKRRAKRAKSMWPSTSNWLKALKDYQHIF TNQNSEVALPLFKLCERRQGISGVKGNQLKLLTTTADTLKTLIRDIKSARCNIEMVFY IWQSGGLVDQVAEALMAAARRGVSCRLMLDSAGSRHFFRGPYPKMMRDAGVEVIEALK VNLFRVFFRRMDLRQHRKMVLIDNAIAYTGSMNMVEPRFFKQNAGVGHWIDLMARTEG PIATTMGIVYACDWEIETGQRMLPPPPNINLMTSEQKTDRIIQVIASGPGFPEELIHQ ALLTAVYAARQQLVMTTPYFVPSDDLLHAICTAAHRGVDVSIIVPHKNDSMMVRWASR SFFAELLEAGVKIYQFEGGLLHSKSVLVDKQLSLLGTANLDMRSLWLNSEITLLIDDD VFGRDLARVQEDYIARSVPIDAAKWTKRSVRQRVTERLFYFFSPLL" gene 60092..60805 /gene="tonB" /locus_tag="REG_0066" CDS 60092..60805 /gene="tonB" /locus_tag="REG_0066" /note="COG0810; similar to AA sequence EcoGene EG11012; similar to AA sequence GI 77972667" /codon_start=1 /transl_table=11 /product="cytoplasmic membrane protein linking inner and outer membranes" /protein_id="EFL92326.1" /translation="MQRKKMISHHHIIGSVIFSIGLHGSLIGLLLYFFTRDNPVLPTT NSAPLAITMVNNSTFITAPQGTTTGAEKSQHEQAETISSAPKNVSKLQHLVKPVQQAL KPTLTQPKVKKSETIKTNPSMNEPAPNSLISKAGSEQLPTASTTLKTPSLLSEPRALI KTKPVYPARAQALGIEGRVRIQYDIDKNGYVINLRILEATPRNIFEREVKKAVKMWRY EAIAVKDYVTEIVFKIPTS" gene 60966..62207 /locus_tag="REG_0067" CDS 60966..62207 /locus_tag="REG_0067" /inference="protein motif:PFAM:PF02638" /note="COG1649; similar to AA sequence EcoGene EG13794; similar to AA sequence GI 17548979" /codon_start=1 /transl_table=11 /product="Tim barrel glycosyl hydrolase superfamily hypothetical protein" /protein_id="EFL92327.1" /db_xref="PFAM:PF02638" /translation="MKYYKFTIVILLSLLISACSKSVKSENTPHLRASWIATVLQLDW PKSTPIFTADRIATQKKELIAILDEAVNMGMNAIIFQVKPNADAFYRSNILPWSTYLT GTLGKDPGYDPLDFIIKEAHKRNLKLHAWLNPYRVSMDTSKETIHMLENTPPEAPKSV YSRHQDWIGIAWDRFVLDPGIPAVRFWIEEVVTELVSNYDIDCIHFDDYFYAESTDSL LNDEKTYLAYGTAFSNKADWRRNNTYLLIKQLSKKIKALKPHVEFGISPAGVWRNKKD DLSVSDTQVGHPNYDAAYADTRRWVQEELIDYIAPQIYWPLARKVASYDVIAKWWANV VRPTKTRLYIGMALYKVGKYDALEPDWSIDGGVPEIKRQLDLNESIPEIQGSILFRQG SLQEPETQKVAEYIKKRWRGL" gene complement(62643..62960) /locus_tag="REG_0068" CDS complement(62643..62960) /locus_tag="REG_0068" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92328.1" /translation="MAYFTTHRQSFLLKMSSSSDDSFIDNHNAVYQRLDELLILKYHQ AETADQQNTVDTFYPLNIDGISRLLIIGSREQKNHQHFTVNIAALNYAVLQIAHRGTG FLQ" gene complement(63143..64978) /locus_tag="REG_0069" CDS complement(63143..64978) /locus_tag="REG_0069" /note="similar to AA sequence GI 70730350" /codon_start=1 /transl_table=11 /product="putative cytotoxin Mcf" /protein_id="EFL92329.1" /translation="MGVNAVFAIMAIQSWLRNDSTVPGNTQLAQILQLHTYLAMTQVT FNTSHDMALLQAALRKGNIGLTRLFQFIATPVGLALTLSDVALSAIELSKAENEGQRI LATTQLSFSVIGLSLFVGSLVACLLGSTLLVSGLFILGITLAVTGYIIQSTVVENLNK LDKAKIIANYFTSMLKGWRQAGFTLNQGILVPCQGAVITQVDLQNATSLAVVFDAKGQ RIKRRRAQGRSPSDYINLYQLRQIVTTRRTLALPVNAAGMKTLVLPTQPRARINPIMN EKFSFSLQNNNGSEFQAMHFFSRKDADFPFMIYPAALSRVPYFSVPSELQLHYFHTKI DILLGNQHYYLIAPGVDEGSPENPLINPPIYSEHLHYHFHAPRQKAAWVVLVLNRAQA NMTIDCVNDQVNWLIDVSHINDIEMTSSHSTEFPAGHLLKFFCRTPTTAGEYMTEVIT TISVKNSEETKITLNLPQGAIEWKPQQTLFCRINFTELNISSNQQESIDEASVLIAIQ NYLRQQRTHHRYAINRVRLDNYRQQGERHIGNAANELENINDYFYPLSQPALLYTANN DQTIFNDSSQRSNVVLIFHNQTSAWYRGDLAIRHLVTDTTVLQGI" mobile_element complement(65343..65793) /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene complement(65368..65772) /locus_tag="REG_0070" /note="ISRin2, transposase orfB, pseudogene; similar to COG3335; similar to GI 30249527" /pseudo gene complement(66187..66966) /gene="hilA" /locus_tag="REG_0071" CDS complement(66187..66966) /gene="hilA" /locus_tag="REG_0071" /note="C terminal truncation; COG3710; similar to AA sequence EcoGene EG13038; similar to AA sequence GI 34498095" /codon_start=1 /transl_table=11 /product="invasion protein transcriptional regulator" /protein_id="EFL92330.1" /translation="MNELLSDVEQYVFGDFILKKDGIIFHNDKKEKLPCKELSVLILL LNSAGLLLSADEIIKKIWRGDLGAEKSLARCIYVLRKILQENKDNRYIDVVYGKGYRF TRPVTRLLPENKKKSKSMLAILPFKMENQVDSLIIHDFLLQALSKYTPLGLSILPSIL TNNCKNYDDIVTLLDKTQPDYYLAGTMIICNSQPCLPIELVHAGEHSIVHRESIILEK DINFSCFILQHILDEFLPNHIPCLQNKKINHQKYNMKNRLL" gene complement(68238..69025) /gene="ybiQ" /locus_tag="REG_0072" /note="putative polysaccharide deacetylase; similar to COG2861; similar to GI 123440475; EcoGene EG12298" /pseudo gene complement(69080..70462) /locus_tag="REG_0073" CDS complement(69080..70462) /locus_tag="REG_0073" /inference="protein motif:PFAM:PF01551" /note="COG4942; similar to AA sequence EcoGene EG12297; similar to AA sequence GI 77977368" /codon_start=1 /transl_table=11 /product="M23 family domain-containing peptidase" /protein_id="EFL92331.1" /db_xref="PFAM:PF01551" /translation="MIKKTLFLITMIVGHIIGRRNTLLIRQQSICFMLCVILYSSLFY SYLLPFSSHAADTLSSEKKTNNKNQVDNKVQLKNLQQGIEEKEKSVKKQKQQHQTLLE RLRQQENNIAQVSRTLREIQSTLTQLNKDMADVSTSISQLEKQQSIQQTLLAKQLNAA FKQGKHSALRLILNGEAGRRDERILAYFNYLNHARTRSINTLKKIRTDLARQKKILVQ KKHRQTTLLNEKKEQQQKWETARTARKQTLTSLEKSLQKDQQSLTELKSNERRLRNKI ANAERRAKARAKKEAQEAARMREQIKAKKQQAEKTGSQYTLSENERSLMARTGGLGPP KGQTIWPVRGEIRHRFGEALQGELRWKGMVIAATEGREVRAIAYGRVLLADWLQGYGL MVVVEHGRGDMSLYGYNQSILVNVGDEVKAGQAIALVGSSGGQGQPSLYFEIRRQGQA MNPQPWLDTP" gene complement(70552..71547) /gene="gapA" /locus_tag="REG_0074" CDS complement(70552..71547) /gene="gapA" /locus_tag="REG_0074" /note="COG0057; similar to AA sequence EcoGene EG10367; similar to AA sequence GI 212710749" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase A" /protein_id="EFL92332.1" /translation="MTIKIGINGFGRIGRIVFRAAQERTDIEVVAINDLLDAEYMAYM LKYDSTHGRFNGTVEVKEGHLVVNGKKVRITAEKDPANLKWNEVNVDVVAEATGLFLT KETAGKHLDAGAKKVVLTGPSKDDTPMFVMGVNHETYAGQKIVSNASCTTNCLAPLAK VINDKFGIVEALMTTVHATTATQKTVDGPSQKDWRGGRGASQNIIPSSTGAAKAVGKV IPELNGKLTGMAFRVPTPNVSVVDLTARLAKSATYPEICQAIKEASERELKGILGYTE DEVVSNDFNGEKLTSIFDAKAGIALNDNFVKLIAWYDNETGYSNKVLDLIAHISK" gene 71792..72051 /gene="yeaC" /locus_tag="REG_0075" /note="hypothetical protein; similar to COG3139; similar to GI 22126051; EcoGene EG13489" /pseudo gene complement(72240..74063) /gene="sppA" /locus_tag="REG_0076" CDS complement(72240..74063) /gene="sppA" /locus_tag="REG_0076" /note="COG0616; similar to AA sequence EcoGene EG10968; similar to AA sequence GI 77977677" /codon_start=1 /transl_table=11 /product="protease IV (signal peptide peptidase)" /protein_id="EFL92333.1" /translation="MRIFLRFITGFFRQTWRLLNFVRELVCNLFFILLIFIAISLYFQ FQNKSEPVKGALLVDLNGIIVDKPVVNNKLRVWGRELLGSSSTRLQENSLFEIVETLR QAKSDNNITGIVLSLNNLAGADQPSLQYIGKALSEFRNSGKPIYAIGESYSQAQYYLA SFANKIYLAPQGSVQLHGFSTNTLYYKSLLDKLKVSTHIFRVGTYKSAVEPMLRDNMS DAAREASSRWVESLWQNYLTTVAANRYLSPQQLFPSAPEMITALQTKEGNLAKYALDN KLVDQIASNPEVETELSKTFGWDEENNNFNFISIYDYQSQEQPQQDNEIAVILINGAI VDGAKTPGNIGGDAAAAQIRQARLDPKIKAVILRVNSPGGSASASEVIRAELVALRRA NKPLVVSMGGMAASGGYWVSTPANYIIASPSTLTGSIGIFGVINTFENSLDNVGVHSD GVATSPLADVAITKALPPEFSQMMKMTIEHGYQTFIELVATARKKTIAQMDEVAQGRV WTGSDAQQRGLVDQLGDFDDAVKKVAELAKLKQYTLQWFSEQPNLKEVILDQINTSMQ AMLPPPFSAMLTAVKEQPHFLNQLKDPQNLYALCLVCSDLQ" gene 74366..76240 /gene="topB" /locus_tag="REG_0077" CDS 74366..76240 /gene="topB" /locus_tag="REG_0077" /inference="protein motif:PFAM:PF01751" /note="COG0550; similar to AA sequence EcoGene EG11014; similar to AA sequence GI 170024322" /codon_start=1 /transl_table=11 /product="DNA topoisomerase III" /protein_id="EFL92334.1" /db_xref="PFAM:PF01751" /translation="MQLFIAEKPSLARAIADILPKPHRRNDGFIVCGNEHIVTWCIGH LLEQAPPDVYDSRYNRWSLTDLPIIPKKWQLQPRSSVIKQLNTIKKLLQQADEVIHAG DPDREGQLLVDEVLDYLALTPSIRQNVRRCLINDLNPQAVERAVKRLRDNRDFIPLCV SALARARSDWLYGINMTRAYTLLGRNAGYNGVLSVGRVQTPVLGLVVRRDEEIENFIP KDFFEVKAHIITPKGERFVALWQPSDACENHQDEEGRILHKPLAEHVINRITWQQAKV TAYHDKKESETAPLPFSLSTLQIEAAKRFGLSAQKVLDICQCLYENYKLITYPRSDCR YLPTEHFLDRHSVFKAISCHQPELLPLSVMNDDRRNRCWDDKKVDAHHAIIPTPRSSS VKMTADENKVYDLIAKQYLMQFCPNAQFRKCAIELEIMGGKFIAKARFLVYAGWRTLL GTKERNEEDEGMPLPVVAPGAELLCEKAELLERQTQPPRPFTDASLLSAMTGISRFVQ DKELKKVLRATDGLGTEATRAGIIELLFKRNFLCKKGRYISASAAGRALIHALPAIAT HPDMTAHWEATLTRISEKKFCYQDFMQPLVATLKHLIYQVKQSHSSSTFNRPLRKPTA " mobile_element 76585..77504 /mobile_element_type="insertion sequence:ISRin1" gene 76655..77092 /locus_tag="REG_0078" CDS 76655..77092 /locus_tag="REG_0078" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92335.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 77101..77478 /locus_tag="REG_0079" CDS 77101..77478 /locus_tag="REG_0079" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92336.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(77546..77716) /locus_tag="REG_0080" /note="transposase" /pseudo gene 77767..78806 /locus_tag="REG_0081" /note="transposase; similar to COG3464; similar to GI 124545269" /pseudo gene complement(79072..79148) /locus_tag="REG_0082" /note="tRNA-Pro2" tRNA complement(79072..79148) /locus_tag="REG_0082" /product="tRNA-Pro" gene complement(79160..79246) /locus_tag="REG_0083" /note="tRNA-Leu2" tRNA complement(79160..79246) /locus_tag="REG_0083" /product="tRNA-Leu" gene complement(79503..79579) /locus_tag="REG_0084" /note="tRNA-Arg1" tRNA complement(79503..79579) /locus_tag="REG_0084" /product="tRNA-Arg" gene complement(80287..81582) /gene="codB_2" /locus_tag="REG_0085" CDS complement(80287..81582) /gene="codB_2" /locus_tag="REG_0085" /inference="protein motif:PFAM:PF02133" /note="COG1457; similar to AA sequence EcoGene EG11327; similar to AA sequence GI 50119874" /codon_start=1 /transl_table=11 /product="cytosine NCS1 transporter" /protein_id="EFL92337.1" /db_xref="PFAM:PF02133" /translation="MNKNIINDDNYTVSRVPTTMRFPFISVTLVYMGMLTALDQFMLG AVLGHSMTLSHAFLSIFFGSLIFGFVTIGLGFAGMREGLSSSLLARWCGFGRLGSVFV GMVIAVSLLGWFGVQNAVFAQGLNYALNDRLGFGWSAALSGTALTVLVTFGFKALKFS AKLAVPLFSIVIGYISVMTLTGHNITHLINAVPIGEPITISAGITIVVGGCIVASLIT PDLSRYCQNRKHVFWMVIASIVVGEFIVNGLAILIARVLNTSDVVAIMAQTAGGIGLL TVIFSTLRINDINLYSSSLGIANALEGMTGKKWRYTWITLAMGLLGTTLSIMGILDQF VDFLTVLGVLFPPIIGVMLVDYYILRTNRALLDATRREGKLPDTLSTPLIGWPAIVSS ILGSAVGLALDWGVPSLNSLLVASIFYWILASLSAFHRR" gene 82671..83563 /locus_tag="REG_0086" /note="hypothetical protein, Ig domain; similar to GI 77971991; EcoGene EG13378" /pseudo gene 84086..84916 /locus_tag="REG_0087" CDS 84086..84916 /locus_tag="REG_0087" /note="similar to AA sequence EcoGene EG11192; similar to AA sequence GI 85059814" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92338.1" /translation="MGVWGKIKDWVCRNKKSKALKKIYDLTHNDHEPDTESALKTITS FYQLKEMIYPGFQDRFQASVTENEDGTYTFAFSIKDAMDERKLVYGNFEKDVHAFSAR KLTNNSEFLDTSNVSREGVDAALAKVAYNVALDKLEGISSPNQDRLYLHLLSERTKQK MGFDQRLAQEWITLQMKCFDYYALQRSSLDSIEGMDLTKTIETENEWIYNFARSMSSI KRNIQKPLAEKFNNKTNRLYDEPIYAEITDLKAVHSERTDKPLRAMTSQSQTIQNFRL " gene 85225..85383 /locus_tag="REG_0088" CDS 85225..85383 /locus_tag="REG_0088" /codon_start=1 /transl_table=11 /product="TM2 domain-containing hypothetical protein" /protein_id="EFL92339.1" /translation="MHLFFFGGIGAHKFYLGKIGQGFLYLLFFWTLIPAIIAFIEFIR PLRKLAFI" mobile_element 85350..86269 /mobile_element_type="insertion sequence:ISRin1" gene 85420..85857 /locus_tag="REG_0089" CDS 85420..85857 /locus_tag="REG_0089" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92340.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 85866..86243 /locus_tag="REG_0090" CDS 85866..86243 /locus_tag="REG_0090" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92341.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(86416..89865) /locus_tag="REG_0091" CDS complement(86416..89865) /locus_tag="REG_0091" /inference="protein motif:PFAM:PF02369,PF09134" /note="similar to AA sequence EcoGene EG13378; similar to AA sequence GI 153949670" /codon_start=1 /transl_table=11 /product="Ig domain-containing hypothetical protein" /protein_id="EFL92342.1" /db_xref="PFAM:PF02369" /db_xref="PFAM:PF09134" /translation="MDVGFGGIKCFFFSKNSNNTEKTVTAEDKIVQGIMTTGSLLSNT DNPIHAAINMARSAVVSEANASIGQWLNQFGTARVQLNIDNDFHLDGSALDFMLPLYD NSKSLLFTQLGARNKSGQNTFNIGAGARIFQNNWMFGVNTFFDHDLTAKNRRIGLGAE VWADYLKLSANSYFSLNNWHQSQDFIGYNARPANGYDLRVEAYLPSYPQLGGKLMFEQ YYGDEVALFATNHRQKNPNAITVGINCTPIPLLTLGVERRKNDTFFNFQMNYRLGESW QAQINPSAVTTMRTRVGNRYDLVERNNHIVLDHQKQQVIRLTLPQKLSNVAGNTFRLT ALVTAKHGLGRIDWDRTSLLAAGGTVTQISQDTVEIKLPSYPADNNNVYTLSAVAPII VDAQNSTFTVSPDSIIANGKITSSLTFTAKDASNQPLRNLNVSFKRDDEAGTRLSAVT ENKGVYSATLTGNDAKAVTITPHVGGQAIDQVRAQTVTLMAPPAAPVAPRHYDFTVSK ERITADGEDEAVLTFTAKDASNQPLCNLKVSFNRDDETGTRLSDITEEKGVYRAKLKA VKGTLAKAVTITPHVEGQAVVGNNMEKVVTITITARTITPDLHFANAQQSTIYTKNFI RSQAIRGMPDNVEQIWSSSDNSVATVDNNGKVTLIKSGEVKITVYTSGNAQYNPAKAS YVLTIDKADPKLQAGDGNPITATWADGKSYSIAATFGNADVGSSLTPVYTSQNTGIVT VNGNGTLNAIKPGRSTVSVSTRETDQFKAASADVLYLLNKGTVNISFDVTEVKTTDEE TFTLQKTKNKVPSDADVHWGSSDSNVVNLSSSESVQGKVGKGRARLTLNVAENDFYSA SSGHYDVLIYSQPIFELEEIRYSSHGNYSNNGDWIPVYADDDIILPLRIDTSNEFNQA GSVTVYLFDDGGQSLGEKEVPKSSGIHEIHFSPQYYFWGRQLYLKVIAKGQYGNLITA NKSKFVSVKAPDINDIGSIKTTATASAIITSTGELDNGCQMSFAGRMHHVIVWPKTEL NIPDNKKLITQLFISHKIVDPTEDSREVNYNDRDWLTSSGVVGYKGKSARYAIKEECW DNHKGSFTLQTMLQFGEKEYNMSHTFSWHGKMAWKVCAALLGEKIALIRLLDSRLFYS LYN" mobile_element 89829..90328 /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene 89903..90151 /locus_tag="REG_0092" /note="ISRin2, transposase orfA, pseudogene" /pseudo gene 90087..90332 /locus_tag="REG_0093" /note="ISRin2, transposase orfB, pseudogene; similar to COG3335; similar to GI 30249527" /pseudo gene complement(90355..90984) /locus_tag="REG_0094" CDS complement(90355..90984) /locus_tag="REG_0094" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92343.1" /translation="MTSHHSLRFPKRSIAKYHQAVDKIVEFYTANVDDQENTTLVSEN FKVFKKKIENSDDQDSHRYYQVKSVLEEIARLLVQPNTPKNPLNNKLAQIYELADRII YCADGATTDILRASSNLFAPSPDLLSNMQKIKEKIAVNTLLEFMVQHAINNNIHTFNA FWDHFHQKLALPGSQDRFRNLDLVTPRLVARYRKKLTEALTPYRIAYAV" gene complement(91054..91308) /locus_tag="REG_0095" CDS complement(91054..91308) /locus_tag="REG_0095" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92344.1" /translation="MRDIQDNGMNLVRMAQQQRERNREKKHAPDAAAPVEGAAAQVAA DDINVVDSVYYTGETSEAVASFKMSEDYAQFIRPLRKPTA" gene complement(91369..91956) /locus_tag="REG_0096" CDS complement(91369..91956) /locus_tag="REG_0096" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92345.1" /translation="MKLPSAARASTRSQQRGGLKDKGYDEGYIDSKSGMIKMAKNPEG ITSEQWAHLIERVRHIEPRYSLAEAEAFLNQFNYANATKVSDYQSMLEGIEESHVELA LVDPGPLNHGYHSPLSWTMIDKSTSEQEVPPPKKVKMTVAGSSQPLPPADLPESDSTS VLAAHINRAGIPPKKWQALITKVKSIQPNYSYAEA" gene complement(91976..93331) /gene="xseA" /locus_tag="REG_0097" CDS complement(91976..93331) /gene="xseA" /locus_tag="REG_0097" /inference="protein motif:PFAM:PF01336" /note="COG1570; similar to AA sequence EcoGene EG11072; similar to AA sequence GI 77957204" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII large subunit" /protein_id="EFL92346.1" /db_xref="PFAM:PF01336" /translation="MPSISVPSIFTVSLLNQHVRQLLEMEMGQIRLSAEISNFSQPSS GHWYFTLKDERAQVRCVMFRNSNRFVTFKPRNGQQVLIRASITLYEARGDYQLIAENM QPAGDGLLQQQFEQLRQQLTAEGLFKQDHKKPLPHSAKQIGVITSIHGAVLHDVLQVL QRRDPSLPVVIYPTSVQGVDAPWQIMKAIEIANQRAECDVLIVCRGGGALEDLWSFND ERVVRAIFNSRLPIVSAVGHETDVTLVDFVADLRAPTPSAAAELLSRDQLELMRQIAV QQQRMAMALDYYLAQCQRQFSQFKHRLQRQHPQLQLANQQTELVRLQNRLEQAISTQM AEQLQQLHFLQQRLIKLRLLEYFYGYHQRIQQQAYGLKQALERQCNQYRQRFSVVCSR LEAVSPLAILARGYNVTHTSAGTVLNSIKQGQRGEKIITRLQDGSIESEITQINAVKI T" gene 93367..93900 /locus_tag="REG_0098" CDS 93367..93900 /locus_tag="REG_0098" /inference="protein motif:PFAM:PF02130" /note="COG0319; similar to AA sequence EcoGene EG13655; similar to AA sequence GI 123443202" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92347.1" /db_xref="PFAM:PF02130" /translation="MIFISNVILLKEVILLLITHLFVDAPVILDLQIVCTHNKKLPTE ANFNSWLEAIQVKFQSLSEAEMTIRLVDEAESRQLNFIYRDKDKPTNVLSFPSTLPEE INLPWLGDLVICRQVVEREAVEQNKTLLAHWAHMVVHGTLHLLGYDHITDEEAQEMES LETDILQTLGYPDAYFL" gene 93986..94894 /gene="corC" /locus_tag="REG_0099" CDS 93986..94894 /gene="corC" /locus_tag="REG_0099" /inference="protein motif:PFAM:PF00571,PF03471" /note="COG4535; similar to AA sequence EcoGene EG13654; similar to AA sequence GI 188534467" /codon_start=1 /transl_table=11 /product="Putative Mg2+ and Co2+ transporter CorC" /protein_id="EFL92348.1" /db_xref="PFAM:PF00571" /db_xref="PFAM:PF03471" /translation="MSDDHPSINDNSPPAKNGFFSAISRKFLNIVLRYFFQCKIKNRT DLVAFIRDSEQKDLIDHDTRDMLEGVMNIAEQRVRDIMIPRSQMVILKYNQTLDECLD VITESAHSRFPVISEDKDHIEGMLLAKDLLPFILTDSTAFSLNKVLRPAVVVPESKRV DRMLKEFRLQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDDDEEDWAVRPLS NDTYAVRALTKIEYFNQIFNTDFSDDEVDTIGGFVMQAFGHLPTRGEVIEIKGYSFKT AMTDSRRIIQVHVKVPPNGLFPTLEN" gene 94895..96457 /gene="lnt" /locus_tag="REG_0100" CDS 94895..96457 /gene="lnt" /locus_tag="REG_0100" /note="COG0815; similar to AA sequence EcoGene EG10168; similar to AA sequence GI 123443204" /codon_start=1 /transl_table=11 /product="Apolipoprotein N-acyltransferase" /protein_id="EFL92349.1" /translation="MLLNRQWIRILLAFSFGACGTLAFSPFDFWPAAILSLAGLLLSI LNRSRKQAAIIGFAWGMGLFGTGINWVYVSIAEFGGMPTVTNIFLVLLLSAYLSCYPL LFAVALTCLYPKTTWYKFAIGAPVLWQLSEFLRGWVLTGFPWLQFGYSQISGPLRDIA PILGVDGITFTLVAISGLLVYACHQRRIMLGMMALLLLLLPWSLRQLNGGTANWFTLN PDRTVNIAMVQGNIAQSMKWDPSTLADTRQIYLDATLPYLGKAPIIIWPETAIPDIEV NQYPFLSMIDETVRAHHSSVITGIVDARQTETGTHFFNNVIVLGDKEHYLYSTTQRYQ KHHLVPFGEFVPLEHLLRPLAPFFDLPMSSFSRGNEIQPQLKVAGFNLTAAICYEIVL GQQIRNNFRPDTDFLLTVSNDAWFGHSIGPWQHFQMARMRALEMGRPLLRSTNNGITA VVAANGDVLAAIPPFTRQVLNVAVTPTSGVTPYARFGSWPLWLISLILAVIPFVFKAA ARQPGGETDECR" gene 96551..97081 /gene="yabI" /locus_tag="REG_0101" CDS 96551..97081 /gene="yabI" /locus_tag="REG_0101" /note="COG0586; similar to AA sequence EcoGene EG11571; similar to AA sequence GI 77973690" /codon_start=1 /transl_table=11 /product="conserved inner membrane protein" /protein_id="EFL92350.1" /translation="MTLNDIVTYTTDFARAHEIWAIPLVFFLALGESLAFISLLLPAT IILLAFGVLIGESGITFWPIWIAAAIGAFFGDWLSYWIGFHYKDRVNTLWPLSHHPHL LTRGRTFFERWGIFGVFIGRFFGPLRAVVPLIAGVCNMPQGYFQLANLISAFFWAFGI LAPGAFGMQWLHEWMD" gene 97149..98480 /gene="rmuC" /locus_tag="REG_0102" CDS 97149..98480 /gene="rmuC" /locus_tag="REG_0102" /note="COG1322; similar to AA sequence EcoGene EG11472; similar to AA sequence GI 77973691" /codon_start=1 /transl_table=11 /product="recombination limiting protein" /protein_id="EFL92351.1" /translation="MEINVWYILIGAGCLLSVLLGWLVAASIEKLKQLAYWRDQCHKL DTALQLQREENSAQKTELREMKVRLEETRTAAEEKQHLLLNSEQRLTSQFENLANRIF EQTGRQVNEQNQQSLDHLLLPLREQLENFRRQIQESYGQEARERHTLTHEIRCLQQLN SKMASETINLTNALKGDNKIQGNWGEVVLSKVLQASGLREGHEYHTQVSVKVDHNSRM QPDVIVRLPQDKDVIIDAKMSLVAYERYFNSEEEAKRESALNEHILSLRNHIKMLGKK DYQQLPGLRSLDYVLMFIPIEPAFLAALDRQPELINEALQHNIMLVSPTTLLVALRTI NNLWRYEHQSENAQKIAERASKLYDKLRLFVDDMECLGQSLNKVQISYSQAMNKLIEG RGNLIKQAESFRTLGVEIKKPISPVLVEKSKTKEERHSVSHEDELPCVVTE" gene 98491..99273 /gene="ubiE" /locus_tag="REG_0103" CDS 98491..99273 /gene="ubiE" /locus_tag="REG_0103" /note="COG2226; similar to AA sequence EcoGene EG11473; similar to AA sequence GI 22124364" /codon_start=1 /transl_table=11 /product="bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase" /protein_id="EFL92352.1" /translation="MIKSRQAKTMTGQEKETTHFGFRTVAKEAKEDMVAAVFHSVAAK YDLMNDVMSFGIHRIWKRFTINCSGVRRGQKILDLAGGTGDLTAKFSRLIGDQGQVVL ADINQSMLQVGREKLRNNGIIANVYYVQANAEALPFPDNYFDCITIAFGLRNVTEKQQ ALNSMFRVLKPGGRLLILEFSKPECEPISKIYDAYSFHILPKMGKIVAQDAESYRYLA ESIRMHPDQETLKGMITDAGFENVTYFNLTGGIVALHRGFKF" gene 99242..99910 /locus_tag="REG_0104" CDS 99242..99910 /locus_tag="REG_0104" /inference="protein motif:PFAM:PF02036" /note="COG3165; similar to AA sequence EcoGene EG11474; similar to AA sequence GI 123440649" /codon_start=1 /transl_table=11 /product="SCP-2 sterol transfer domain-containing hypothetical protein" /protein_id="EFL92353.1" /db_xref="PFAM:PF02036" /translation="MWRYIAALSFEVENMMSLKREFLASTAVAALLELLLNKLLFRDP SMKAIRASLANKVLGIEIKELKTPLLLLFSPYHVDVLTHWEDPIDCTIKTGLSALTKL SDPQQLSSLIRDGQLIVEGNIQIAQQLVTLLDFAQWDPTEYLVPYIGDIAAETVAQML AKSHRFLTTQWKQQQRYWAEAITEEWKIAPPPLAVAWFSKEVDAVSQKIDRLSARLEQ LEER" gene 99907..101529 /gene="ubiB" /locus_tag="REG_0105" CDS 99907..101529 /gene="ubiB" /locus_tag="REG_0105" /note="COG0661; similar to AA sequence EcoGene EG11476; similar to AA sequence GI 77973694" /codon_start=1 /transl_table=11 /product="2-octaprenylphenol hydroxylase" /protein_id="EFL92354.1" /translation="MTLLGEFRRLCLIIRVFFNYGLGELVPNVAVLRIVCRLFFWLPN RHKDKPLGERLRLALQQLGPVWIKFGQMMSTRRDLFSTEIADQLTLLQDRVAPFDGSL ARQCIESAMGAPLATWFDDFDQQALASASIAQVHRARLKSNGQEVVLKVIRPNIRPII KADIRLMYRLAKWIPKLLPDSRRLRPYEVVKEYEKTLFDELNLLREAANAIQLRRNFK NSSTLYIPKVYSDLCRENVLVMERIYGIPVSDITALEQNGTNMKLLAERGVQVFFTQV FRDNFFHADMHPGNIFVSYQHPQDPLYIGIDFGIVGALNKADKRYLAENFVAFFNRDY QRVAELHLHSGWVPDDTNVEDFEFAIRTLCEPIFAKPLAEISFGHLLLNLFNTARRFN MEIQPQLVLLQKTLLYIEGLGRQLYPKLDLWATAKPFLENWLRDQSGLCALLQTLKQK IPLWAEKFPELPELVYDSLQQHKKLRQSLDHLSLQLKKQQQQGKAHYLLNVGVTLLVS GTLLQLIGQHEALSIGLIIVGVWMWIVAWKRV" gene 101496..101909 /gene="tatA" /locus_tag="REG_0106" CDS 101496..101909 /gene="tatA" /locus_tag="REG_0106" /inference="protein motif:PFAM:PF02416" /note="COG1826; similar to AA sequence EcoGene EG11478; similar to AA sequence GI 77961742" /codon_start=1 /transl_table=11 /product="TatABCE protein translocation system subunit A" /protein_id="EFL92355.1" /db_xref="PFAM:PF02416" /translation="MDVDRRLEACLKPYYLMRANVRSQQRGGFKDEGSIDHEKICEVN NMGGISIWQLIIIAVIVALIFGTNKLRSLGSDLGASLKGFKKAIGDDATPSSTDTSPT KADQKSDDADFLKKIVTDEPLDTKTEKTKNNKEQV" gene 101913..102359 /gene="tatB" /locus_tag="REG_0107" CDS 101913..102359 /gene="tatB" /locus_tag="REG_0107" /note="COG1826; similar to AA sequence EcoGene EG14322; similar to AA sequence GI 157144466" /codon_start=1 /transl_table=11 /product="TatABCE protein translocation system subunit B" /protein_id="EFL92356.1" /translation="MFDIGFGELLLVIVIGLIVLGPERLLVAVKTVTGWIRALRSVAT TVQHEVSRELKLQELQESLKKAEQAGLQHMTPELKASIDELKNATEALLHFYHAEVTA NDDHTINHSLPIDDEAIHDEMISTKPPAAPKEVSTATAAHPTKGDR" gene 102363..103109 /gene="tatC" /locus_tag="REG_0108" CDS 102363..103109 /gene="tatC" /locus_tag="REG_0108" /inference="protein motif:PFAM:PF00902" /note="COG0805; similar to AA sequence EcoGene EG11479; similar to AA sequence GI 85058092" /codon_start=1 /transl_table=11 /product="TatABCE protein translocation system subunit C" /protein_id="EFL92357.1" /db_xref="PFAM:PF00902" /translation="MSIDPAKPFISHLIELRKRLLYCLITLLIVFLALVYFANDIYQL VSAPLIKQLPAGASMIATDVASPFLTPIKLTIMVSLLLSAPLILYQIWAFIAPALYQH ERRLMLPLLASSSLLFYMGMAFAYFIVFPLAFGFFTQTAPAGVLIATDINHYLDFVMA LFIAFGVSFEIPVAIILLCWCGVTTPDDLKKKRPYVLVGVFIIGMLLTPPDIFSQTLL AIPMYLLFEVGILSAHFYAKKPRTKQVSKP" gene 103130..104257 /gene="hemB" /locus_tag="REG_0109" CDS 103130..104257 /gene="hemB" /locus_tag="REG_0109" /inference="protein motif:PFAM:PF00490" /note="COG0113; similar to AA sequence EcoGene EG10428; similar to AA sequence GI 22124374" /codon_start=1 /transl_table=11 /product="5-aminolevulinate dehydratase (porphobilinogen synthase)" /protein_id="EFL92358.1" /db_xref="PFAM:PF00490" /translation="MPGARNLHVLMSSAPGALAAYHSLRFHLSEDNMSYLFTGTFPAR RLRRLRRYDFSRRLTAENQLTVNDLIYPLFIIEGEHRQEAIASMPGISRMSIDLLLKE AEVVAKLGIPVIALFPVIDSSIKSINAEEAYNPNGLVQRAVRALKKAVPELGVLTDVA LDPYTLHGHDGIVDKSSGYVINDTTNGILVRQALSHAEAGSDIIAPSDMMDGRIGAIR DALENKKQANTQIMAYSAKYASCYYGPFRDAIGSRVKLKSIDKKNYQMDPANSHEALQ EIAQDLQEGADMVMIKPGMPYLDIVRRVKDTFYVPTFAYQVSGEYAMHMAAINNHWLP EKPAIMESLLCFKRAGADGVLTYFAKKVAQWLSEDQFVVNQ" gene complement(104290..104781) /gene="rfaH" /locus_tag="REG_0110" CDS complement(104290..104781) /gene="rfaH" /locus_tag="REG_0110" /inference="protein motif:PFAM:PF02357" /note="COG0250; similar to AA sequence EcoGene EG10839; similar to AA sequence GI 85058093" /codon_start=1 /transl_table=11 /product="Transcription antiterminator" /protein_id="EFL92359.1" /db_xref="PFAM:PF02357" /translation="MKAWYLLYCKRAQLLRAQEHLERQGVVCLTPIVAIKKMWRGRRV TLHEPLFPNYLFTEFNPENIHTTTIKASRGVSHFVRFGLYPVIIPQMVIDDIKSHTIK TISDSTVAVSGDTVRVTEGIFSGLQAIYTEPDGERRSMILLNILNSQVSKSLDNRHFE KVV" gene complement(104910..105911) /locus_tag="REG_0111" CDS complement(104910..105911) /locus_tag="REG_0111" /inference="protein motif:PFAM:PF04245" /note="COG3081; similar to AA sequence EcoGene EG12048; similar to AA sequence GI 77962645" /codon_start=1 /transl_table=11 /product="nucleoid-associated protein" /protein_id="EFL92360.1" /db_xref="PFAM:PF04245" /translation="MNLDINQIALHQLVKSGDSVLDMVLRDSLLPSNNRVVQEMMVEL HRVYSAKNKAYGQFNEDSEFANAFKRCRKGNDDFLSFTRRATAGLRDELIKYPFAESG VLLFCQYRHLATEYLLIAFLNSCNSMRVDEQLDLSITHHLDINHVDIVARVDVTEWET NNESKRYLTFLKGRVGRKVSDFFMDFLAASEGGDTKKQNRDLLQAVDDYCAEANLDKE QKQAYRQQVYSYCNEQQQADECIELKQLSEALPVFNEKNLQQFSTEQGYDIADSFPAD RPTLRQLTKFSGSGGGLNINFDALLLEKRIFWDAATDTLTIKGTPPNLRDQLKRCLG" gene 106084..107826 /locus_tag="REG_0112" CDS 106084..107826 /locus_tag="REG_0112" /inference="protein motif:PFAM:PF00884" /note="COG3083; similar to AA sequence EcoGene EG12049; similar to AA sequence GI 77975404" /codon_start=1 /transl_table=11 /product="putative sulfatase" /protein_id="EFL92361.1" /db_xref="PFAM:PF00884" /translation="MVINRQSYREKVSHMISWGHWFTLFNILLGLIIGSRYLFVSNWP DSLLGRIYALASWLGHFSFIIFVVYLLIIFPLTFVIMSPRCLRFIATVLATAGLMLLS IDTEVFTRFHLHLNPVTWKLMLNLELGKFTAHWLLVSIYVLIIFFLELFLARWCWKKL RSLDRKHFVKPLVALFICAFFASHLIYSWADANFYRPITMQRANLPLSYPMTARNFLE KQGLLNQQEYQRRLAEQGNPSALVVEYPLNQISFGDHLGDHYNLLLIVVDNIHTNSMA TEMPALAQFAQANIQFNQHYSSGNRENAGLLGLFYGISASYLDGILAARKPSAFITAL GTQGYQFGLFSSDGFKSSLYRQALLTDFSLPPPVPQRDCETTMQWQHWLTHYSPKGKW FSYLHLNAAAAVSNPSDEKSTDQQITTIIETLKQQAQLDKTVVIITASHGVELNESTD VTWHEGSQFNREQFQVPLIIHWPGMPARQINKLTYHEDIMTTLMQQLLSVKTAPQDYS QGEDLFVAQRTKNWLVTGDSDLLVVITPTQTILYQEGKHRIYDQQGREIKENKPSLSL LLQVLTETKRFIAN" gene 107845..108463 /gene="gor-1" /locus_tag="REG_0113" /note="glutathione oxidoreductase; interrupted by IS element; similar to COG1249; similar to GI 123444230; EcoGene EG10412" /pseudo mobile_element 108433..109352 /mobile_element_type="insertion sequence:ISRin1" gene 108503..108940 /locus_tag="REG_0114" CDS 108503..108940 /locus_tag="REG_0114" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92362.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 108949..109326 /locus_tag="REG_0115" CDS 108949..109326 /locus_tag="REG_0115" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92363.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 109427..109720 /gene="gor-2" /locus_tag="REG_0116" /note="glutathione oxidoreductase; interrupted by IS element; similar to COG1249; similar to GI 188535439; EcoGene EG10412" /pseudo gene complement(109681..110166) /gene="zur" /locus_tag="REG_0117" CDS complement(109681..110166) /gene="zur" /locus_tag="REG_0117" /note="COG0735; similar to AA sequence EcoGene EG11929; similar to AA sequence GI 157372690" /codon_start=1 /transl_table=11 /product="Zn(II) DNA-binding transcriptional repressor" /protein_id="EFL92364.1" /translation="MNSTTQQKSLLTQAMNLCKQRKANLTPQRLEVLRLIVQQQRAIS AYDLLDKLRIAKPQAKPPTVYRALDFLLAQGLIHRVESTNSYVLCHHFLEPAHTSVLF ICDCCGSVIEHPTTDIKQILLELAKQDGFVLRHSVVEVDGLCSSCADHRMVTNSSAAV G" gene complement(110194..111257) /gene="yiiD" /locus_tag="REG_0118" /note="predicted acetyltransferase; similar to COG0454; EcoGene EG11853" /pseudo gene complement(111309..113150) /gene="typA" /locus_tag="REG_0119" CDS complement(111309..113150) /gene="typA" /locus_tag="REG_0119" /note="COG1217; similar to AA sequence EcoGene EG11837; similar to AA sequence GI 157373111" /codon_start=1 /transl_table=11 /product="putative membrane GTPase involved in stress response" /protein_id="EFL92365.1" /translation="MLEAKAVTENLRNIAIIAHVDHGKTTLVDKLLQHSGTFDARVEA TERVMDSNDLEKERGITILAKNTAIKWKDYRINIVDTPGHADFGGEVERVLSMVDSVL LVVDALDGPMPQTRFVTQKAFSHGLNPIVVINKVDRPGARPDWVLDQVFDLFDKLGAT DKQLEFPVIYASALLGIAGIEHEKMATDMTPLYQTIVNKVAAPQVEVNGKLQMQISQL DYNSYVGVIGIGRIKRGTVKPNQQVSIIDSEGKTRNGKVGKVLSHLGLERIETDLAEA GDIIAITGLGELHISDTICDVNAVEALPALIVDEPTVNMYFCVNTSPFCGREGKYVTS RQILDRLKKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPK VIYREVDGRVQEPVENVTLDIEEQHQGAVMQALGGRKGDVKDMAPDGKGRVRLDYEIP SRGLIGFRTEFMTLTSGTGLLYSTFSHYDDVKPGEIGQRQNGVLISNGQGKAVAFALF SLQDRGKLCLGHGAEVYEGQIIGINSRSNDLTVNCLTGKKLTNMRASGTDEATTLIPP IKMSLEQALEFIDDDELVEITPLSIRIRKRHLTENDRKRATRGRKEI" gene 113417..114835 /gene="glnA" /locus_tag="REG_0120" CDS 113417..114835 /gene="glnA" /locus_tag="REG_0120" /inference="protein motif:PFAM:PF03951" /note="COG0174; similar to AA sequence EcoGene EG10383; similar to AA sequence GI 22127675" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="EFL92366.1" /db_xref="PFAM:PF03951" /translation="MISMSVEDVMTMLKNHEVKFVDLRFTDTKGKEQHVTLPSSQINA DFFKEGKMFDGSSIAGWKPINQSDMLLMPDTDTAVLDPFFEDTTLLIRCDVLEPDTRQ GYARDPRSIAKQAEAYLKASGVADQVFFGPEPEFFLFDDVRFGSSISGCHVSIDDIEG AWNSSTKYEGGNKGHRPAVKGGYFPVPPIDSSQDLRSTMCLTMEDMGLIIEAHHHEVA TAGQNEVATRFNTLTKKADEIQIYKYVVHNVAHNFGKTATFMPKPMFGDNGSGMHCHM SLLKNGENLFSGDKYGGLSEIALFYIGGIIKHAKAINAFTNPTTNSYKRLVPGYEAPV MLAYSTANRSASIRIPLVSNPKARRIEVRFPDPAANPYLAFTAQLMAGLDGIINKIDP GVAMDKDLYHLPFEETQKIPKVASSLEEALMALDGDRQFLKRGNILDDETIDAYIALH QVEVERIRMTPHPLEFEMYYSV" gene complement(114998..115675) /gene="pyrE" /locus_tag="REG_0121" CDS complement(114998..115675) /gene="pyrE" /locus_tag="REG_0121" /inference="protein motif:PFAM:PF00156" /note="COG0461; similar to AA sequence EcoGene EG10808; similar to AA sequence GI 77959600" /codon_start=1 /transl_table=11 /product="Orotate phosphoribosyltransferase" /protein_id="EFL92367.1" /db_xref="PFAM:PF00156" /translation="MSDAQLRKKPMKDYQRDFIKFAIDKQVLTFGEFTLKSGRVSPYF FNAGRFNTGRDLAKLGRFYAAALMAAGIEFDLLFGPAYKGIPIVTTTAVALANHHDKD IPYCFNRKEAKNHGEKGMLVGSPLQGRVILVDDVITAGTAIRESMGIINAQGALLAGV MIALDRQERGDQPISAVQEVEQCYQCKVFSIVTLSDVIAYLEEEPEWADKLGAMKKYR IAYGIEC" gene complement(115825..116553) /gene="rph" /locus_tag="REG_0122" CDS complement(115825..116553) /gene="rph" /locus_tag="REG_0122" /inference="protein motif:PFAM:PF01138" /note="COG0689; similar to AA sequence EcoGene EG10863; similar to AA sequence GI 77959601" /codon_start=1 /transl_table=11 /product="ribonuclease PH" /protein_id="EFL92368.1" /db_xref="PFAM:PF01138" /translation="MRLAGRAAEQVRPLTLTRHYTKYAEGSVLVEFGDTKVLCTATIE EGIPRFLKGKGQGWITAEYGMLPRSTHSRNAREAAKGKQGGRTLEIQRLIARSLRAAV DLQQLGEHTITIDCDVLQADGGTRTAAISGASVALADALEKAVIKKKLKKNPMRGLVA AISVGIVKNEALGDLEYTEDANAETDMNVVMMEDYQMIEVQGTAEGKPFSHEQLLTLL ALARGGIGTIFQAQKAALAINSCL" gene 116752..118002 /locus_tag="REG_0123" CDS 116752..118002 /locus_tag="REG_0123" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92369.1" /translation="MSTLNRIESNQWLASVCEGVEFSDRLFMNDIIIGIENSPLNTWE HRQESSNTEEEKSQMIFDQYKLAYLHGMGEATSSDIFTRYQNRLMALLAIDSNRDHQQ NPMKLMSDLMEIIDDSLSKKEQKFRVKAPTAAKSPKPQALKREQQSHGFTEIQPRPVP APRHSVIEERAALESFRMWSQTAPKLTESEYQRFKSLLEVKEAYAKTRSSAESIADSL RDNVIKAYEYIDRTGSSNAELDKILSEIINYAEKARSSAEKINKAEKEGLLPDRIQFE PLCIEKYAIAQRVLIEKLEHQLKAPAAASRPLEAPTAAEIQEQRSETAPTLEANKYEL FLNDASEKATEAEAITVSAELNVMKARDHLEKNKDKNTAEQREIVYTAEEFATKIRMA AEIILFHKKQAELAITNREDLFGN" mobile_element 117980..118899 /mobile_element_type="insertion sequence:ISRin1" gene 118050..118487 /locus_tag="REG_0124" CDS 118050..118487 /locus_tag="REG_0124" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92370.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 118496..118873 /locus_tag="REG_0125" CDS 118496..118873 /locus_tag="REG_0125" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92371.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 118912..119004 /locus_tag="REG_0126" CDS 118912..119004 /locus_tag="REG_0126" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92372.1" /translation="MKFYIKKLDERHQAIRKWGEEQRKHLYHLK" gene 119140..120003 /locus_tag="REG_0127" CDS 119140..120003 /locus_tag="REG_0127" /inference="protein motif:PFAM:PF03755,PF08340" /note="COG1561; similar to AA sequence EcoGene EG11192; similar to AA sequence GI 77976753" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92373.1" /db_xref="PFAM:PF03755" /db_xref="PFAM:PF08340" /translation="MIRSMTAYARRDIKGEWGSSFWELRSVNHRYLDTSLRLPESFRG LEPRIRAHLRSRLTRGKVECNLHFQSDGNTQKPLILNKKLAKQLVEAGRWVKRKSDEG EINPLDILRWPGVMVAEEQDIDVISDELMPALELVLDDFIQSRKIEGEALKKMIEHRL EGVDKEIANIRIHMPAILQWQRERLLSKLDEAKIQLENTRLEQELLLIAQRIDVAEEL ERLDSHIKETRHILNKKEAVGRQLDFMMQEFNRESNTLASKSINTDVTNAAIQLKVLI EQMREQIQNIE" gene 119966..120388 /gene="tusC" /locus_tag="REG_0128" CDS 119966..120388 /gene="tusC" /locus_tag="REG_0128" /inference="protein motif:PFAM:PF02635" /note="COG2923; similar to AA sequence EcoGene EG12897; similar to AA sequence GI 22127850" /codon_start=1 /transl_table=11 /product="putative intraceullular sulfur oxidation protein" /protein_id="EFL92374.1" /db_xref="PFAM:PF02635" /translation="MSRCVNRSKILSKPMIKNANKSVAFIFTQAPHGSAVGREGLDAL LATLAFTKNKNIGVFFVADGVLQLLPQQQPEKILARNYIATFNLLTLYEVKKCYLCER SLQQRGLSKTNNWLLTVEILPLADVRDNLKQYDTVLTF" gene 120543..120830 /gene="tusB" /locus_tag="REG_0129" CDS 120543..120830 /gene="tusB" /locus_tag="REG_0129" /note="COG2168; similar to AA sequence EcoGene EG12896; similar to AA sequence GI 77957339" /codon_start=1 /transl_table=11 /product="putative intracellular sulfur oxidation protein" /protein_id="EFL92375.1" /translation="MLYTVSRSPYQSNLSYLLALVTPKDDILFLQDGVTAVIKDSEIF NNLLSQSKNLFALKDDLSARGLNEKISEIVTVIDYAGFVDLTIKHHQHFAW" gene 121372..121746 /gene="rpsL" /locus_tag="REG_0130" CDS 121372..121746 /gene="rpsL" /locus_tag="REG_0130" /inference="protein motif:PFAM:PF00164" /note="COG0048; similar to AA sequence EcoGene EG10911; similar to AA sequence GI 26110368" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S12" /protein_id="EFL92376.1" /db_xref="PFAM:PF00164" /translation="MTTINQLVRKPRRKRVAKSNVPALASCPQKRGVCTRVYTTTPKK PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL DCSGVKDRKQARSKYGVKKPKA" gene 121839..122309 /gene="rpsG" /locus_tag="REG_0131" CDS 121839..122309 /gene="rpsG" /locus_tag="REG_0131" /inference="protein motif:PFAM:PF00177" /note="COG0049; similar to AA sequence EcoGene EG10906; similar to AA sequence GI 183597111" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S7" /protein_id="EFL92377.1" /db_xref="PFAM:PF00177" /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAEAIVY SALEELAKRSAKAPLDAFEISLNNVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR WLVDAARKRSDKSMAVRLAHELFDALENKGSAVKKREDVHRMAEANKAFAHYRW" gene 122406..124511 /gene="fusA" /locus_tag="REG_0132" CDS 122406..124511 /gene="fusA" /locus_tag="REG_0132" /inference="protein motif:PFAM:PF00009" /note="COG0480; similar to AA sequence EcoGene EG10360; similar to AA sequence GI 77957336" /codon_start=1 /transl_table=11 /product="protein chain elongation factor EF-G" /protein_id="EFL92378.1" /db_xref="PFAM:PF00009" /translation="MARQTPIERYRNIGISAHIDAGKTTTTERVLFYTGVNHKIGEVH EGAATMDWMEQEQERGITITSAATTCFWSGMAKQFQPHRINIIDTPGHVDFTIEVERS MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGADFQKVVKQLES RLAARPVEIQLPIGKEENFTGVIDLVKMKAIKWNETDQGVTFEYEDIPENMLAQAEDR RLHVVEEAAEASDELMDKYLSGTELTEEEIKQGLRQRVLNNEIILVTCGSAFKNKGVQ AMLDAVVEYLPAPTDVAAINGILNDGKDTPAERRANDEEPFSALAFKIANDPFVGSLT FFRVYSGKVKSGEEIFNPIKGKKERLGRIVQMHANKREEIKEVYAGDIAAAVGLKDVT TGETLCDKNNQIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAKEDPSFRVSTD EESGQTIMAGMGELHLEILCDRMRREFNVEANVGKPQVAYRETIRSTVEQEGKHVKQS GGRGQFGHVWLRIEPLEPGGAGYEFVDAIKGGVIPKEYIPAVDKGIQEQLKNGVLAGY PIVDIKVTLFDGSFHDVDSSELAFKIAGSIAFKAAFMKAKPVLLEPIMKVENETPEEY MGDVIGDLNRRRGMIEGMEDTATAKTIRSQVPLSEMFGYATDLRSQSQGRASYSMEFL KYQEAPPNVAQVIIEARKK" gene 124582..125766 /gene="tufB" /locus_tag="REG_0133" CDS 124582..125766 /gene="tufB" /locus_tag="REG_0133" /note="COG0050; similar to AA sequence EcoGene EG11037; similar to AA sequence GI 223582951" /codon_start=1 /transl_table=11 /product="protein chain elongation factor EF-Tu" /protein_id="EFL92379.1" /translation="MSKEKFVRTKPHINVGTIGHVDHGKTTLTAAITAVLAKKYGGQA RAFDQIDNAPEEKARGITINTSHVEYDTEKRHYAHVDCPGHADYVKNMITGAAQMDGA ILVVAASDGPMPQTREHILLGRQVGVPYMVVFMNKCDMVDDEELLELVELEIRELLST YDFPGDDVPVIKGSALKALAGEAEWEAKIIELAEALDSYIPEPERDIDKPFLLPIEDV FSISGRGTVVTGRVEKGIIKVGEEVEIVGIKPTTKTTCTGVEMFRKLLDEGRAGENVG VLLRGTKREEIERGQVLCKPKSITPHTTFEAEVYILTKEEGGRHKPFFPGYRPQFYFR TTDVTGNIKLPEGVEMIMPGDNVKIVVTLIAPIAMDESLKFSIREGGKTVGAGVVTKI LE" gene 125998..126396 /gene="rpsJ" /locus_tag="REG_0134" CDS 125998..126396 /gene="rpsJ" /locus_tag="REG_0134" /note="COG0051; similar to AA sequence EcoGene EG10909; similar to AA sequence GI 52308156" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S10" /protein_id="EFL92380.1" /translation="MLNDCTYSYSLKWIKAQSIAFINNWSSGLMQKQRIRIRLKAFDH LLIDRSTSEIVETAKRTGATVRGPIPLPTRKERFTILISPHVNKDARDQYEILTHKRL IDIVEPTENTVDALMRLDLAAGVDVQISLG" gene 126368..127144 /gene="rplC" /locus_tag="REG_0135" CDS 126368..127144 /gene="rplC" /locus_tag="REG_0135" /inference="protein motif:PFAM:PF00297" /note="COG0087; similar to AA sequence EcoGene EG10866; similar to AA sequence GI 77978227" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L3" /protein_id="EFL92381.1" /db_xref="PFAM:PF00297" /translation="MSMCRSAWVNQVIERLGAETMTSKDKMGLIGKKLGMTRVFTEEG VSIPVTVIEIEKNRVTQVKDIKTDGYCAVQVTTGQKKTSRLKKPQRGHFEGTKTIRSK RATLDNPEIIKEVLTSKDPVTAGRGLWEFRIAEDQKFLRGEEITVEIFADVKKVDVTG TSKGKGFAGVVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGDER VTVQSLDVVRVDAKRNLLLVKGAVPGATGGNLIVKPAVKA" gene 127161..127766 /gene="rplD" /locus_tag="REG_0136" CDS 127161..127766 /gene="rplD" /locus_tag="REG_0136" /inference="protein motif:PFAM:PF00573" /note="COG0088; similar to AA sequence EcoGene EG10867; similar to AA sequence GI 37528542" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L4" /protein_id="EFL92382.1" /db_xref="PFAM:PF00573" /translation="MELAIKDTQGVLTVSETTFGRVFNEALVHQVVVAYAAVARQGTR AQKTRAEVTGSGKKPWRQKGTGRARAGSVKSPIWRSGGVTFAAKPQDHSQKVNKKMYR GALKSILSELVRQDRLIVVKEFSVEMPKTKLLLQKLKEMALEDVLIVTKEIADNLLLA SRNLYKVDVCDVAGIDPVSLIAFDKVVMTTDAVQQIEEMLT" gene 127763..128065 /gene="rplW" /locus_tag="REG_0137" CDS 127763..128065 /gene="rplW" /locus_tag="REG_0137" /inference="protein motif:PFAM:PF00276" /note="COG0089; similar to AA sequence EcoGene EG10883; similar to AA sequence GI 22127862" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L23" /protein_id="EFL92383.1" /db_xref="PFAM:PF00276" /translation="MIREERLLKVLRRPQVSEKATLVMEKHNTCVFKVMKDATKAEIK DAVSKLFEVKVKNVNTLLVKGKATRHGQRVGRRSDWKKAYITLEEGHTLDLSGSTE" gene 128084..128911 /gene="rplB" /locus_tag="REG_0138" CDS 128084..128911 /gene="rplB" /locus_tag="REG_0138" /inference="protein motif:PFAM:PF00181" /note="COG0090; similar to AA sequence EcoGene EG10865; similar to AA sequence GI 77962743" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L2" /protein_id="EFL92384.1" /db_xref="PFAM:PF00181" /translation="MVLLVKCKPTSPGRRHVVKVVNSELHKGKPYAPLLKKLSKSGGR NNNGRITTRHIGGGHKQHYRLVDFKRSKDDIPAVVERLEYDPNRSANIALILYRDGER RYILAPKGLKKGDSIQSGVHAPIRNGNCLPMLYIPVGTTVHNIEMKPGKGGQLARSAG ACVQIVAREDAYVTLRLRSGEMRKILSDCRATIGEVGNSEHMLRVLGKAGASRWRGIR PTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRNNKRTDKFIVRHRSKK" gene 128936..129214 /gene="rpsS" /locus_tag="REG_0139" CDS 128936..129214 /gene="rpsS" /locus_tag="REG_0139" /inference="protein motif:PFAM:PF00203" /note="COG0185; similar to AA sequence EcoGene EG10918; similar to AA sequence GI 90581682" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S19" /protein_id="EFL92385.1" /db_xref="PFAM:PF00203" /translation="MPRSLKKGPFLDYHLLKKVEKALESGDKKPIKTWSRRSMIIPQM NNLTIAIHNGRQHVPVFVSEEMVGHKLGEFAPTRTYRGHVADKKVKKR" gene 129229..129606 /gene="rplV" /locus_tag="REG_0140" CDS 129229..129606 /gene="rplV" /locus_tag="REG_0140" /inference="protein motif:PFAM:PF00237" /note="COG0091; similar to AA sequence EcoGene EG10882; similar to AA sequence GI 85060251" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L22" /protein_id="EFL92386.1" /db_xref="PFAM:PF00237" /translation="METIAQHRHARSSAQKVRLVADLVRGKPVAQALNILTYTNKKAS ALVKKVLQSAIANAEHNDGSDIDDLKVAKIFVDSGPSMKRTMPRAKGRADRILKRTSH ITVVVSDKIAETLETSNGSKSKS" gene 129584..130324 /gene="rpsC" /locus_tag="REG_0141" CDS 129584..130324 /gene="rpsC" /locus_tag="REG_0141" /inference="protein motif:PFAM:PF00417" /note="COG0092; similar to AA sequence EcoGene EG10902; similar to AA sequence GI 50122945" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S3" /protein_id="EFL92387.1" /db_xref="PFAM:PF00417" /translation="MGQKVNPNGFRLGIVKDWDSTWYAVNDKEFADNLAGDKKIRQVL MEKLDKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKKVTDIAAVPSQI NIKEIRKPDLEAKLVADSVASQLERRVMFRRAMKRAVQNAMRAGAKGIRINVSGRLGG AEIARTEWYREGRVPLHTLRADIDYSLSEAHTTYGVIGVKVWIFKGEILGLMHEVRTS VDLNTSRPKEERQQEKRQQRKGNKKENR" gene 130324..130734 /gene="rplP" /locus_tag="REG_0142" CDS 130324..130734 /gene="rplP" /locus_tag="REG_0142" /inference="protein motif:PFAM:PF00252" /note="COG0197; similar to AA sequence EcoGene EG10877; similar to AA sequence GI 37528536" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L16" /protein_id="EFL92388.1" /db_xref="PFAM:PF00252" /translation="MLQPKRTKYRKMQKGRNRGLTIGAKVNFGDFGLKAYGRGRLDAR QIEAARRALSRGIKRQGKIWTCVFPDKPITQKPLEVRMGKGKGNVEYWVALVQPGKML FEMNGVSEETARAAFALAKAKLPIKTTFVTKTVM" gene 130734..130928 /gene="rpmC" /locus_tag="REG_0143" CDS 130734..130928 /gene="rpmC" /locus_tag="REG_0143" /note="COG0255; similar to AA sequence EcoGene EG10887; similar to AA sequence GI 37528535" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L29" /protein_id="EFL92389.1" /translation="MKAQELRKKNVEELKEKLLDLLREQFNMRMHAATGQHKQPDLFK KVRREIARVKTLLTEKQVCK" gene 130925..131182 /gene="rpsQ" /locus_tag="REG_0144" CDS 130925..131182 /gene="rpsQ" /locus_tag="REG_0144" /inference="protein motif:PFAM:PF00366" /note="COG0186; similar to AA sequence EcoGene EG10916; similar to AA sequence GI 54778770" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S17" /protein_id="EFL92390.1" /db_xref="PFAM:PF00366" /translation="MNEKKIRTMQGHVVSNKMEKSIVVTMERIVKHPIYGKFIKRTTK LHAHDEENECGIGDIVTIRECRPLSKTKSWTLVAVIKKAIV" gene 131348..131719 /gene="rplN" /locus_tag="REG_0145" CDS 131348..131719 /gene="rplN" /locus_tag="REG_0145" /inference="protein motif:PFAM:PF00238" /note="COG0093; similar to AA sequence EcoGene EG10875; similar to AA sequence GI 22127869" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L14" /protein_id="EFL92391.1" /db_xref="PFAM:PF00238" /translation="MIQGQTMLNVADNSGARRVMCIKVLGGSHRRYAGIGDIIKITIK EAIPRGKVKKGDVLKAVVVRTRRGVRRPDGSMIRFDGNACVILNNTNEQPIGTRIFGP VTRELRNEKFMKIISLAPEVL" gene 131733..132047 /gene="rplX" /locus_tag="REG_0146" CDS 131733..132047 /gene="rplX" /locus_tag="REG_0146" /note="COG0198; similar to AA sequence EcoGene EG10884; similar to AA sequence GI 77974978" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L24" /protein_id="EFL92392.1" /translation="MAAKIRHNDEIIVLTGKDKGKRGKVKSVLSKGKVIVEGINLVTK HQKPVASLNKPGGIVTKEAAIEVSNVALFNATTGKADRVGFRFEDNKKVRYFKSNKET IK" gene 132063..132602 /gene="rplE" /locus_tag="REG_0147" CDS 132063..132602 /gene="rplE" /locus_tag="REG_0147" /inference="protein motif:PFAM:PF00281" /note="COG0094; similar to AA sequence EcoGene EG10868; similar to AA sequence GI 50122939" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L5" /protein_id="EFL92393.1" /db_xref="PFAM:PF00281" /translation="MAKLHDYYKDEVLKQLMGKCGYSSVMQVPRIEKIVLNMGVGEAI TDKKLLDNAVADLTAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGKRMWQFLER LIDIAVPRIRDFRGLSPESFDGRGNYSMGVREQIIFPEIDYDKVDKLRGLDITIATTA KSDDEGRSLLAAFNFPFRK" gene 132611..132937 /gene="rpsN" /locus_tag="REG_0148" CDS 132611..132937 /gene="rpsN" /locus_tag="REG_0148" /inference="protein motif:PFAM:PF00253" /note="COG0199; similar to AA sequence EcoGene EG10913; similar to AA sequence GI 22127872" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S14" /protein_id="EFL92394.1" /db_xref="PFAM:PF00253" /translation="MAKQSCKAREVVRVKMANKYREKRETLKKIISAGVTVSTDEKSS GNAVWDAVLKLQQLPRDSSPCRQRNRCRQTGRPHGVLRKFGLSRMKVREAAMRGEIPG LRKASW" gene 132970..133362 /gene="rpsH" /locus_tag="REG_0149" CDS 132970..133362 /gene="rpsH" /locus_tag="REG_0149" /inference="protein motif:PFAM:PF00410" /note="COG0096; similar to AA sequence EcoGene EG10907; similar to AA sequence GI 50122937" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S8" /protein_id="EFL92395.1" /db_xref="PFAM:PF00410" /translation="MSMQDPVADMLTRIRNGQSSKKIAVTMPSSNLKVAISNLLKEEG YIEDVKIEGNTKPVLELKLKYFEGKAVVETIQRVSRPGLRIYKKKDELPKVMGGLGIA VVSTSKGVMTDRAARKAGLGGEIICYVA" gene 133377..133910 /gene="rplF" /locus_tag="REG_0150" CDS 133377..133910 /gene="rplF" /locus_tag="REG_0150" /inference="protein motif:PFAM:PF00347" /note="COG0097; similar to AA sequence EcoGene EG10869; similar to AA sequence GI 123444083" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L6" /protein_id="EFL92396.1" /db_xref="PFAM:PF00347" /translation="MSRVAKAPVVIPAGVEVKLNDQVISIKGKNGELTYTVHPAVKVE VTEKNTLIFELHQGADNWAQAGTTRSLVNAMIIGVTEGFTKKLLLVGVGYRASVKNNW VELALGFSHPIKHQLPQGITAECPSQTEIVLKGANKQVVGQVAADLRAYRSPEPYKGK GVRYADEVVRIKEAKKK" gene 133920..134273 /gene="rplR" /locus_tag="REG_0151" CDS 133920..134273 /gene="rplR" /locus_tag="REG_0151" /inference="protein motif:PFAM:PF00861" /note="COG0256; similar to AA sequence EcoGene EG10879; similar to AA sequence GI 50122935" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L18" /protein_id="EFL92397.1" /db_xref="PFAM:PF00861" /translation="MDKKTARIRRATRARRKLKELAATRLVVHRTSRHIYAQVIAPNG SETLVATSTLEKDINNQLKSTANKDAAEAVGKAVALRALGKGIEKISFDRSGFKYHGR VKALADAARAAGLQF" gene 134286..134786 /gene="rpsE" /locus_tag="REG_0152" CDS 134286..134786 /gene="rpsE" /locus_tag="REG_0152" /note="COG0098; similar to AA sequence EcoGene EG10904; similar to AA sequence GI 50122934" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S5" /protein_id="EFL92398.1" /translation="MANIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGNGEG RVGFGYGKAREVPAAIQKAMEKARRNMMKVPLHNGTLQHPVKGAHTGSRVFMQPASEG TGIIAGGAMRAVLDVAGVHNVLAKTYGSTNPINVVRATVDALANMKSPEMVAAKRGKS VEEILG" gene 134795..134977 /gene="rpmD" /locus_tag="REG_0153" CDS 134795..134977 /gene="rpmD" /locus_tag="REG_0153" /note="COG1841; similar to AA sequence EcoGene EG10888; similar to AA sequence GI 157372758" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L30" /protein_id="EFL92399.1" /translation="MEKTIKVTQTRSAIGRLPKHKATLRGLGLRRIGHTVEREDTAAI RGMVNLVSYMVKIEGE" gene 134981..135568 /gene="rplO" /locus_tag="REG_0154" CDS 134981..135568 /gene="rplO" /locus_tag="REG_0154" /inference="protein motif:PFAM:PF01305" /note="COG0200; similar to AA sequence EcoGene EG10876; similar to AA sequence GI 157372757" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L15" /protein_id="EFL92400.1" /db_xref="PFAM:PF01305" /translation="MHLNTLSPAKGAKHAPKRVGRGIGSGIGKTCGRGHKGQNSRSGG GVRRGFEGGQMPLYRRLPKFGFTSRKAMVTAEVRLSELIKVTDAAVKTVSAGAAQASN ATESVVTAAKYPSDVIIDLNILKTANIIGVNIEFAKVIFSGEINFPVTLRVSETKGAR GLRVTRGARAAIEAAGGKIEVIDCKHEAVDGTIEG" gene 135576..136907 /gene="secY" /locus_tag="REG_0155" CDS 135576..136907 /gene="secY" /locus_tag="REG_0155" /note="COG0201; similar to AA sequence EcoGene EG10766; similar to AA sequence GI 206580313" /codon_start=1 /transl_table=11 /product="preprotein translocase membrane subunit" /protein_id="EFL92401.1" /translation="MAKQPELDFQSAKGGLSELKRRLLFVIGVLIVFRIGSFIPIPGV DATVIAKLLEQQRGTIIEMFNIFSGGALSRASIFALGIMPYISASIIIQLLTLVHPTL AEIKKEGEAGRRKINQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVLDPNFAFYFNA VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIIAGLPSAIGHTIELARQGDLHFL LLLLVAALVSAVTFLVVFIERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP AIFASSIILFPATIASWFGGGTGWNWLTTISIYLQPGQPLYVLLYASAIIFFCFFYTA LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLIGAIYITFICLIPEFMR DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSNQYESALKKANLKGNKR" gene 137361..137477 /gene="rpmJ" /locus_tag="REG_0156" CDS 137361..137477 /gene="rpmJ" /locus_tag="REG_0156" /inference="protein motif:PFAM:PF00444" /note="COG0257; similar to AA sequence EcoGene EG11232; similar to AA sequence GI 45440088" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L36" /protein_id="EFL92402.1" /db_xref="PFAM:PF00444" /translation="MKVRASVKKLCRNCKIVKRLGVVRVICSAEPKHKQRQG" gene 137628..137984 /gene="rpsM" /locus_tag="REG_0157" CDS 137628..137984 /gene="rpsM" /locus_tag="REG_0157" /inference="protein motif:PFAM:PF00416" /note="COG0099; similar to AA sequence EcoGene EG10912; similar to AA sequence GI 52426081" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S13" /protein_id="EFL92403.1" /db_xref="PFAM:PF00416" /translation="MARIAGINIPDQKHAVIALTAIYGIGKTGAQKICGAAGVAESVK ISELSEEEINKLRDEVAKYPIEGDLRRQVTLNIKRLIDLGCYRGLRHRRGLPVRGQRT KTNARTRKGPRKAIKK" gene 138002..138391 /gene="rpsK" /locus_tag="REG_0158" CDS 138002..138391 /gene="rpsK" /locus_tag="REG_0158" /note="COG0100; similar to AA sequence EcoGene EG10910; similar to AA sequence GI 188535255" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S11" /protein_id="EFL92404.1" /translation="MAKPAARTRKRVKKQISDGVAHIHASFNNTIVTITDRQGNALGW ATSGGSGFRGSRKSTPFAAQVAAERCAESVKDCGIKNLEVMVKGPGPGRESTIRALNA AGFRITNIIDVTPIPHNGCRPPKKRRV" gene 138422..139042 /gene="rpsD" /locus_tag="REG_0159" CDS 138422..139042 /gene="rpsD" /locus_tag="REG_0159" /inference="protein motif:PFAM:PF00163" /note="COG0522; similar to AA sequence EcoGene EG10903; similar to AA sequence GI 85060232" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S4" /protein_id="EFL92405.1" /db_xref="PFAM:PF00163" /translation="MARYLGPKLKLSRREGTDLFLKSGVRTIDSKCKIDQPPGQHGAH KPRLSDYGVQLREKQKVRRMYGVLERQFRNYYKEAARLKGNTGENLLGLLEGRLDNVV YRMGFGATRAESRQLVSHKGILVNGRVVNIASYQVLPNAIISIREKAKKQSRIRAALE LFEQREKPIWLEVDAAKMEGVYKRLPERTDLPADINEHLIVELYSK" gene 139068..140075 /gene="rpoA" /locus_tag="REG_0160" CDS 139068..140075 /gene="rpoA" /locus_tag="REG_0160" /inference="protein motif:PFAM:PF01193" /note="COG0202; similar to AA sequence EcoGene EG10893; similar to AA sequence GI 183600727" /codon_start=1 /transl_table=11 /product="RNA polymerase alpha subunit" /protein_id="EFL92406.1" /db_xref="PFAM:PF01193" /translation="MQGSVKEFLKPSLISEKISQTHAKVILEPLERGFGHTLGNALRR ILLSSMPGCAVTEVEIEGVLHEYSTKEGVKEDILSILLNLKELAVKVQEKENEVILTL EKSGIGPVTAADITSDSKIEIIKPEHVICHLTDKSASINMRIKVQRGRGYVPASTRVH GEEDERPIGRLLVDACYSPIERIAYNVEATRYQDRTDLDKLIIEMETNGTIDPEEAIR HASTILSEQLTAFVDISHNVNTCKTSVEAPDFPPILLRPVDDLELTVRSANCLKAEAI HFIGDLVQRTEVELLKTPNLGKKSLTEIKDVLAVHGLSLGMRLENWPPASIADQCSQN K" gene 140108..140488 /gene="rplQ" /locus_tag="REG_0161" CDS 140108..140488 /gene="rplQ" /locus_tag="REG_0161" /inference="protein motif:PFAM:PF01196" /note="COG0203; similar to AA sequence EcoGene EG10878; similar to AA sequence GI 188535252" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L17" /protein_id="EFL92407.1" /db_xref="PFAM:PF01196" /translation="MRHRKSGRQLNRNSSHRKAMFLNMSGSLVRHEIIKTTLAKAKEL RRVVEPLVTLAKKSDSVANRRLAFARTRDNEVVAKLFTELAPRFSNRTGGYTRILKCG FRAGDNAPMAYIELVDRPAEEFAE" gene 140741..142471 /gene="recJ" /locus_tag="REG_0162" CDS 140741..142471 /gene="recJ" /locus_tag="REG_0162" /note="COG0608; similar to AA sequence EcoGene EG10830; similar to AA sequence GI 22127150" /codon_start=1 /transl_table=11 /product="single-stranded DNA-specific exonuclease" /protein_id="EFL92408.1" /translation="MIMKTQLRRRDVQLREYLPQLQPLLRRLYISRGVKETQELERGV KGLLLWQQLAGIDTAVDLLQQTMETGQCIVIVGDFDADGATSTALAVLALRSMGAKDV KYLVPNRFEEGYGLSPMIVERVARQNAALIVTVDNGISSHAGVELAHQKGIRVLVTDH HLPGETLPNADAIINPNLKHCCFPSKSLAGVGVTFYLMLALRARLKNEGWFAVKTLPI PNLAELLDLVALGTVADVVPLDSNNRILVHQGLSRIRAKRCRPGIQALLDVAKRDAKN LVASDLGFFLGPRLNAAGRLDDMSIGVELLLSDDPLAARILAEELNTLNQERREIEQG MQLEALALCNALEDPDHILPYGIAMYHKKWHQGVVGILASRIKERFHRPVIAFAPAGD GMLKGSGRSIMGLHLRDVLEQLNTQNPGLISKFGGHAMAAGLMLAENKFEEFRQRFAD LVAECLDASQLEGVIWSDGELSIDELSQETAELLREAGPWGQAFPEPIFDGQFRILQQ RLVGEQHLKLILQSVLGGPLLDGIAFNIDTKLWPNSTTVAANLAYKLDINEFKGRRKL QLLVQQLWPV" mobile_element 142701..143799 /note="partial element" /mobile_element_type="insertion sequence:ISRin5" gene 142772..143704 /locus_tag="REG_0163" /note="ISRin5 putative transposase, pseudogene; similar to COG3039; similar to GI 28870376" /pseudo gene complement(143761..144244) /locus_tag="REG_0164" /note="hypothetical protein; similar to GI 157146112" /pseudo mobile_element 144243..144623 /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene 144308..144661 /locus_tag="REG_0165" CDS 144308..144661 /locus_tag="REG_0165" /note="similar to AA sequence GI 30249526" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfA" /protein_id="EFL92409.1" /translation="MTYPLKFRQHVLAFKKKEALTYAETADRFGVGSASLMRWAKRLE PCLTRNKPATKINRAALILDVETYPDASQHERAPRMGVSARGICDALKRAGFSYKKNI LSPPSVSLVVASNFR" mobile_element 144621..145563 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene 144690..145523 /locus_tag="REG_0166" /note="ISRin3 putative transposase, pseudogene; similar to COG2801; similar to GI 51596214" /pseudo mobile_element 145564..146145 /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene 145693..146124 /locus_tag="REG_0167" CDS 145693..146124 /locus_tag="REG_0167" /note="COG3335; similar to AA sequence GI 77163617" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfB" /protein_id="EFL92410.1" /translation="MDESGFAHDMPRLYGYSVKGKRCYGQHDCHAKARTNVIGAQLNG KLTTVCTFDCHINSDIFYAWVTQDLLPKSPPGAVLVMDNVRFHKRQDIQTAIQKAGFI LEYLPTYSPDMNPIEHKWAQAKALRRKRLCDIDTLFSDPLF" gene 146188..146646 /locus_tag="REG_0168" CDS 146188..146646 /locus_tag="REG_0168" /inference="protein motif:PFAM:PF04404" /note="similar to AA sequence GI 218559309" /codon_start=1 /transl_table=11 /product="DNA single-strand annealing protein invovled in recombination" /protein_id="EFL92411.1" /db_xref="PFAM:PF04404" /translation="MSKTFYQQVSALQRQLNAPKNQYNTFGKYRYRSCEDILEGIKLL LGDLFLSISDEIVLIGDRYYVKATATLTDGETSIQASALAPEERDKKGMDAAQLTGAT SSYARKYCLNGLFGIDDAKDADTDAYKQQEERLRQALTPKSDTHPGAIPE" gene 146800..147216 /locus_tag="REG_0169" CDS 146800..147216 /locus_tag="REG_0169" /note="similar to AA sequence GI 156935248" /codon_start=1 /transl_table=11 /product="hypothetical phage protein" /protein_id="EFL92412.1" /translation="MAHTITLKLQQAAREFAATDAIGFSLRGGVKYYDRQLKTQAFTN YQAVVFAKAGKQADFYRETLNEGAIVEIFGDSIKIDIYEGKNGQAIVLELNNAKLGFV ESAKPTQGLQRLPQPVILPRQRSHPSPIPFDDGIPF" gene 147243..147863 /locus_tag="REG_0170" CDS 147243..147863 /locus_tag="REG_0170" /inference="protein motif:PFAM:PF09588" /note="similar to AA sequence GI 223990485" /codon_start=1 /transl_table=11 /product="phage-related exonuclease" /protein_id="EFL92413.1" /db_xref="PFAM:PF09588" /translation="MEQRTEAWFAARCGKVTASKVADVMTKTKTGYAALRQNYKIALI CQRLTGKREETFVTPEMKRGTALEPAAREAYRLREFATEVTEVGLFDHPTIKGFAASP DGLVNDDGLVEIKCPKTWTHLETVRTGKIKNQYVLQMHAQMLCTGRKWCDFVSFDNRQ PPELAYFKTRVQFDKALGKEIETEVRLFLAELEKDIAAIQRYRQVA" mobile_element 148091..149009 /mobile_element_type="insertion sequence:ISRin1" gene 148160..148597 /locus_tag="REG_0171" CDS 148160..148597 /locus_tag="REG_0171" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92414.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 148606..148983 /locus_tag="REG_0172" CDS 148606..148983 /locus_tag="REG_0172" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92415.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 149053..149550 /locus_tag="REG_0173" CDS 149053..149550 /locus_tag="REG_0173" /note="N terminal truncation; similar to AA sequence GI 123442570" /codon_start=1 /transl_table=11 /product="hypothetical phage protein" /protein_id="EFL92416.1" /translation="MVKTAVNHVSAVARNKFAENNAELVDKKQWLSTLDNKTSSPCII RDRLCYTLAGKPIGHTIPYLQGAGRLHFCCRSTETLVTKSWRALGIDRDELEAGTRAS MDGQVPAETTYADWLQQQPYSRQVQVLGKTRANLLREGKRQVDDFFSDKGEWLTLEQL HKTVA" gene complement(149559..150677) /locus_tag="REG_0174" CDS complement(149559..150677) /locus_tag="REG_0174" /inference="protein motif:PFAM:PF02661" /note="COG3177; similar to AA sequence GI 37528688" /codon_start=1 /transl_table=11 /product="Fic/DOC domain-containing hypothetical protein" /protein_id="EFL92417.1" /db_xref="PFAM:PF02661" /translation="MIWQPDVPFNHIPRLPPPTEIVESIALLKACIPARAALAELKQA GELLPNQGLLINLLPLLEAKDSSEIENIVTTSDKLFQYAQGSDQADCATKEALRYRTA LYEGFKQLAKRPLCTNTAIEICSTLKSINMDIRKIPGTVLSNQATGEIIYTPPGGENV IRDLLSNWEHFLHTDDGIDPLIKMAIAHFQFEAIHPFADGNGRTGRILNILYLIEKKL LSLPILYLSRYVVQHKADYYQLLNDVSQYGKWEPWILYMLTAVEQTATWTTHKIAAVR ALVEHTTDYVKRVLPKVYSYELVKMIFEQPYCRISNLVETDIAKRQTASVYLKQMCDI GVLNEIQSGKEKLFVHPKLVQLMTQDSNEFTRYSNVVR" gene 150819..151190 /locus_tag="REG_0175" CDS 150819..151190 /locus_tag="REG_0175" /note="C terminal truncation; similar to AA sequence GI 197747912" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92418.1" /translation="MVFLCTEKIAMKLHIDTEGKAVLENGMPVYLHEDGKAIPFDALA ALNKITALNTEIKSHREAKEALEAKLSQFAGIDDPAKARFKTPAHGSNTWCTGIIKNI ATVPLNLSHLHKDMQALIKPY" mobile_element 151068..151206 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" mobile_element 151203..152122 /mobile_element_type="insertion sequence:ISRin1" gene 151273..151710 /locus_tag="REG_0176" CDS 151273..151710 /locus_tag="REG_0176" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92419.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 151719..152096 /locus_tag="REG_0177" CDS 151719..152096 /locus_tag="REG_0177" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92420.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 152260..153174 /gene="nadC" /locus_tag="REG_0178" CDS 152260..153174 /gene="nadC" /locus_tag="REG_0178" /inference="protein motif:PFAM:PF02749" /note="COG0157; similar to AA sequence EcoGene EG11546; similar to AA sequence GI 77962116" /codon_start=1 /transl_table=11 /product="quinolinate phosphoribosyltransferase" /protein_id="EFL92421.1" /db_xref="PFAM:PF02749" /translation="MLLHKHYSDNRHTKLLEAIEHDIPIIVAFALSEDLGGEVDATCD ITAQLLPADKQAHARIITREAGIFCGSRWLDEVFKQLGSTVKIEWQVEDKKTLKANDT LCDLYGSARTLLTGERTALNFLQTLSGISTHVSHYVAKLDKLNTKLLDTRKTVPGLRT AQKYAVLCGGGENHRLCLADAFLIKENHITAAGSIKQAVEQALLLQKKLPKACGSIEI EVESLDQLKEALATDADIIMLDNFTRSDIIEAVSIRNSIKESALLEVSGNVTLDNLRN YAETGVDYISVGALTKHLHPLDLSLRFQ" gene 153389..153850 /gene="pilA" /locus_tag="REG_0179" CDS 153389..153850 /gene="pilA" /locus_tag="REG_0179" /inference="protein motif:PFAM:PF07963" /note="COG4969; similar to AA sequence EcoGene EG12107; similar to AA sequence GI 22124674" /codon_start=1 /transl_table=11 /product="putative major pilin subunit" /protein_id="EFL92422.1" /db_xref="PFAM:PF07963" /translation="MVRSSEKRVHKMIYRQQGFTLIELMVAVAIIAVLSSIGVPSYQR YIQKAALIDMLQAIMSYKTAIELCVFEKNSITGCNAGSNDIPETKTTRYVKSMKILNG VITLSGQQVLDGLTIVMTPKKNNNDGLSWASTCTTPQVSIADSCKAVFRFL" gene 154366..155892 /gene="hofB" /locus_tag="REG_0180" CDS 154366..155892 /gene="hofB" /locus_tag="REG_0180" /note="COG2804; similar to AA sequence EcoGene EG12106; similar to AA sequence GI 108810827" /codon_start=1 /transl_table=11 /product="conserved protein with nucleoside triphosphate hydrolase domain" /protein_id="EFL92423.1" /translation="MTNYSTSDEIINEELHVLCQRYKAIILTMDKTTLTIATSNGAND ELLSALRFACGCIIKVEHWPEAKIEQILHQWQPQNNLHLSTYSTVATHSEELSNKSLV KNHPLHDFSDEETSLNDDSDTPVIQFINQTLRIAIQKRASDIHFEPYQHRYRVRIRID GVLQEINPPSSELIPRIAACLKVMARLNIAEKRLPQDGQLALQMDNLRYSMRIATLPV QYGEKIVLRILHSHWQPCLEQLGLTDKVLKQLIQVLSAPQGLILVTRPTGSGKTMTLY NSLLQLNHWQKNICSVEDPIEISVEGINQIQTNNKIGLDFSCILRTLLRQDPDVIMIG EIRDNETAEIAVKAAQTGHLVLSTLHTNSTTDTLTRLIQMKVPGYLLASCLKLVIAQR LVRRLCVHCKKPAADAIYYPANIWPKSLRNWLAIGCEYCCAGYYGRIGVYEILMVTPE IQQALINHLDSLKLIDIAQHQGNMTLLTAGLTLVDQGITTITEIKRVIGMISEVEVHQ " gene 155889..157105 /gene="hofC" /locus_tag="REG_0181" /note="assembly protein in type IV pilin biogenesis, transmembrane protein; similar to COG1459; similar to GI 51595055; EcoGene EG11798" /pseudo gene 157249..157324 /locus_tag="REG_0182" /note="tRNA-Asn1" tRNA 157249..157324 /locus_tag="REG_0182" /product="tRNA-Asn" mobile_element 157756..158649 /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene 157821..158177 /locus_tag="REG_0183" CDS 157821..158177 /locus_tag="REG_0183" /inference="protein motif:PFAM:PF01710" /note="similar to AA sequence GI 30249526" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfA" /protein_id="EFL92424.1" /db_xref="PFAM:PF01710" /translation="MTYPLKFRQHVLAFKKKEALTYAETADRFGVGSASLMRWAKRLE PCLTRNKPATKINRAALILDVETYPDASQHERAPRMGVSARGIICDALKRAGFSYKKN ILSPQSRRPSSKRFSD" gene 158192..158624 /locus_tag="REG_0184" /note="ISRin2, transposase orfB, pseudogene; similar to GI 30249527" /pseudo gene 159073..159801 /locus_tag="REG_0185" CDS 159073..159801 /locus_tag="REG_0185" /inference="protein motif:PFAM:PF00196" /note="COG2197; similar to AA sequence GI 123442304" /codon_start=1 /transl_table=11 /product="GerE domain-containing putative transcriptional regulator" /protein_id="EFL92425.1" /db_xref="PFAM:PF00196" /translation="MTDKIKSDKIQNSQNLVVESLNSLPLISITEHSNKPWVIRDCQS RYVYVNQAGLDFLGLPANFNIEGKLDNECPADWAEFAAEYQANDRKAEKTGKRVAIIS TNFYGRKKILEPYYLPRFLIYNKLGECIGTLTNASKLNFISLSQYVNQRTPSVLTLTP PTTLFTEKELRVIFFILQPMTAKMVGDRLCRAKKTIENNLRIIYDKAGVSSLKDFREW CGTIGLDLYIPPEFAKPRVQSQSF" gene complement(160610..161204) /locus_tag="REG_0186" /note="putative transcription regulator containing HTH domain; similar to COG5499; similar to GI 162958025; EcoGene EG12724" /pseudo gene complement(161201..161392) /locus_tag="REG_0187" CDS complement(161201..161392) /locus_tag="REG_0187" /inference="protein motif:PFAM:PF09907" /note="COG4680; similar to AA sequence EcoGene EG12725; similar to AA sequence GI 162958024" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92426.1" /db_xref="PFAM:PF09907" /translation="MKKLIPSLDNFRYRNKWWVIDVSGNTLRLITYIDFRLRKIFVKH ISTHAEYDKLTKYYREHKE" gene complement(161539..161811) /locus_tag="REG_0188" CDS complement(161539..161811) /locus_tag="REG_0188" /note="similar to AA sequence GI 121608110" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92427.1" /translation="MSAITFVELEFGLSVYSNPQRERQNLDAVIEFFEVCLFDAATRE RKSDHLNKLIGVHAIALGVTLVTNNESDFATYKNLTVETCKDFISR" gene 162517..163452 /gene="repA" /locus_tag="REG_0189" CDS 162517..163452 /gene="repA" /locus_tag="REG_0189" /inference="protein motif:PFAM:PF10134" /note="COG5534; similar to AA sequence GI 840656" /codon_start=1 /transl_table=11 /product="plasmid replication initiator protein" /protein_id="EFL92428.1" /db_xref="PFAM:PF10134" /translation="MADYNGKSRVNNLKTLRPRKHQQIDFFIADEVDIVTFRDELASM EHPFFALKGGDTRVREYKNKNVTVTVRPAVEIGIATIFDKDVWIYTISKLQEAINNNH PISRTVCFTPYDYFITTNREIGGRTYKELEKALDRLRGTSITTNIYHSQDKQESRGFG LIDSWRMVEEKKGKLDIGMVEVTLPNWLYQAVTNTKVLQISPDYFRIRKAIDRRLYEI SRKHCGKQHEWVISLELLHLKTGSTAASKAEFKRSIKNLVKTNELPDYEIAYEAEKDY VIFTNRNQDSEAAQKSKLWEGGKKAIYGLKKKYGF" gene 164263..164724 /locus_tag="REG_0190" CDS 164263..164724 /locus_tag="REG_0190" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92429.1" /translation="MSKGQRKIQIRITDDDFLTLEKKSTSLGLKPASLLKKIAVSIIN GNAVSDKIKPYYSTCYNKKLSTKLNDELSEALKKEAAKNGWSLSKEMRFRLASSLVDD PSFYPDEVKELRAARNAIDVLGRNLHYIIRPLRKLAFMRNFGKTLLNKEPP" mobile_element 164652..165570 /mobile_element_type="insertion sequence:ISRin1" gene 164721..165158 /locus_tag="REG_0191" CDS 164721..165158 /locus_tag="REG_0191" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92430.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 165167..165544 /locus_tag="REG_0192" CDS 165167..165544 /locus_tag="REG_0192" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92431.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(165849..166532) /locus_tag="REG_0193" CDS complement(165849..166532) /locus_tag="REG_0193" /note="COG2931; similar to AA sequence GI 153829724" /codon_start=1 /transl_table=11 /product="putative RTX-family protein" /protein_id="EFL92432.1" /translation="MRAYWQHQIAVMTAEERLGILPGKGLRRKYLDSINFSPFSTFSK IGSQHSWEHAHYDSGDGLSTRHPVKRDDVHSWHLPAANAILTSNTPTENRADKKSRII VVLEDDAESLRSAMALAAKHPNDTLVYQRDLQGNMRKVFGDPATLGGDLNLLFVAHGR GGNNDAFNNHTLGGYSAAELAEVTQRVHHYLSEQHVVNGILYPSCRFRPCCYFHHHFF TSIIPYRFT" gene complement(166580..168325) /locus_tag="REG_0194" CDS complement(166580..168325) /locus_tag="REG_0194" /inference="protein motif:PFAM:PF04488" /note="similar to AA sequence GI 28872136" /codon_start=1 /transl_table=11 /product="glycosyltransferase sugar-binding region containing hypothetical protein" /protein_id="EFL92433.1" /db_xref="PFAM:PF04488" /translation="MPQISAPQYGSINPTPVPITIPIELEDVSFTLPMDGVESKYGER FKMDDDPHDQAIAFDLTLNCWRRLKNTIMGNEYGTIGDPIIPVAGSSGRIKWQDVLPE DLPNSLTRRLPVTKTKDIVAVGLLPGQIRQGIYVIWTPHVANEPFRYIVNIEQCQYNV KFDFSRKHWYLYEHNLYVVRTENKSGKMVWETVSSNELHRYPPVLPNPASEETATSGL NRVQPSVPELSDPLHQSGAELTPPIHYSLPIDDIMVNRLGQYMVKMKDVNYQRVVFDL ESGDWRLAHFDEEYFDTSSIQIKERIVRTKNKVGKAVWVVRNKYINVQDILPNTQTRE IFIPDVPEVPAGGTAIPKTIHYIWLGNSKLPDNLVSNIIANAHKSFSAEGNGYRSIIH VDVDNAEIFTQIRDALHQKAPGLEVQDLNQDDFFIQFKASKFGEMFAAARYGPNANFA AAADVLRCRLLHKYGGIYLDTDDPLIKSIIDRDFLAHPNDVLLGALLGGEKNTANMNY IYNNSVFGSHPGNPVLQAVSEESYRRWQEQEPELFSTPRPSIQKDKQGKKVGTPEEQK VSRTQMDLYIKKSQK" mobile_element complement(168873..169444) /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene complement(168884..169315) /locus_tag="REG_0195" CDS complement(168884..169315) /locus_tag="REG_0195" /note="COG3335; similar to AA sequence GI 77163617" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfB" /protein_id="EFL92434.1" /translation="MDESGFAHDMPRLYGYSVKGKRCYGQHDCHAKARTNVIGAQLNG KLTTVCTFDCHINSDIFYAWVTQDLLPKSPPGAVLVMDNVRFHKRQDIQTAIQKAGFI LEYLPTYSPDMNPIEHKWAQAKALRRKRLCDIDTLFSKPLF" mobile_element complement(169445..170774) /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene complement(169488..170705) /locus_tag="REG_0196" /note="ISRin3 putative transposase, pseudogene; similar to COG2801; similar to GI 224588244" /pseudo gene complement(170988..171698) /gene="gntX" /locus_tag="REG_0197" CDS complement(170988..171698) /gene="gntX" /locus_tag="REG_0197" /inference="protein motif:PFAM:PF00156" /note="COG1040; similar to AA sequence EcoGene EG12934; similar to AA sequence GI 77962664" /codon_start=1 /transl_table=11 /product="gluconate periplasmic binding protein with phosphoribosyltransferase domain" /protein_id="EFL92435.1" /db_xref="PFAM:PF00156" /translation="MFSSSRKKIMFTIASQCWLCRQPLYLFHHGICCFCLRNLINQSS CCIGCGLPSTQRYLLCGRCLRDPPCWQSLTFVSHYQPPISTLIKKMKFDGVTQLAPIL ARLLLLRWLQEKHYGSMIKPQRIISTPLHKYRCWRRGFNQSDLLARPLARWLNCDYHP GSLMRLYPTPSQRELSATTRRKNLRGVFHCTDNVRGQHLALLDDVITTGSTMKEMAKL LLAQGATSVQVWCLCRTL" gene 171823..172592 /gene="bioH" /locus_tag="REG_0198" /note="carboxylesterase of pimeloyl-CoA synthesis; similar to COG0596; similar to GI 77962665; EcoGene EG10122" /pseudo gene complement(172619..175057) /gene="rnr" /locus_tag="REG_0199" CDS complement(172619..175057) /gene="rnr" /locus_tag="REG_0199" /note="COG0557; similar to AA sequence EcoGene EG11259; similar to AA sequence GI 22124551" /codon_start=1 /transl_table=11 /product="Exoribonuclease R" /protein_id="EFL92436.1" /translation="MSDRCQRIFNAALHSIHHIRKSQMKTFHADDNGETNLMSQDPFL EREREKYGSPIPSREFILAHLTKRETPARREEIAKELNLSSDESLEALRRRLRAMERD GQLVFTRRQCYALPERLDLLRGTVIGHRDGYGFLRIEGSKDDLYLSAEQMKTAIHGDL VLAQPLVCDRKGRREARIVRILVPKTSQIVGRYFTDAGTGFVGPDDSHLSFDILIPAD DAICGVRMGTVVVVELTQRPTRLTKAVGKIVEILGDKMGTSMAIDIALRRYEIPYIWP SAVEKELAKLQEDVPEEAKKGRVDLRHLPLLTIDGEDARDFDDAVYCEKGCSGGWRLW VAIADVSYYVRPQTALDDEARSRGNSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMV CEMVIDVQGQLCSYQFYEAVMNSHARLTYTKVWKIIEGDPALRAQYQPLVPHLEQLHA MYKILDKARAKRGGIAFEKEEAKFIFNAEQRIERIEHVVRNDAHKLIEECMILANIAA ASFVEKHKEPALFRVHDRPSDDHIEALRSVLNELGITLGGGLKPQSKDYAVLMDEIAD RPDHHRLQTMLLRSMKQAIYDPENRGHFGLALNSYGHFTSPIRRYPDLALHRAIKYQL AQSITAQKECWTAGGGWHSDHNDMLQLGQHCSMAERRADDATRDVADWLKCDFMLDQV GQTFTGIIAAVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRYDNIGQRLTGEASGKAYH LGDTVEIRVEAVHLDERKIDFSLVSSLRKPRREGKTKRDKAKKNNTRMSRDDGLAISN TTVTKKKANKARKK" gene complement(175240..176550) /gene="purA" /locus_tag="REG_0200" CDS complement(175240..176550) /gene="purA" /locus_tag="REG_0200" /inference="protein motif:PFAM:PF00709" /note="COG0104; similar to AA sequence EcoGene EG10790; similar to AA sequence GI 77961300" /codon_start=1 /transl_table=11 /product="Adenylosuccinate synthase" /protein_id="EFL92437.1" /db_xref="PFAM:PF00709" /translation="MIIQMGKNVVVLGTQWGDEGKGKIVDLLTKQAKYVVRYQGGHNA GHTLIVNNEKTVLHLIPSGILCENVTSIIANGVVLDPAALIKEIDGLIERGIPVEERL KISAACPLILPYHAALDNAREKKLGGQAIGTTGRGIGPAYEDKVARRGLRVCDLLNKE TFATKLKEIVDYHNFQLVHYYQTDAIDYQKVLNDVSTVADRLIAMMIDVTQILDEGRK KGEAILFEGAQGTLLDIDHGTYPYVTSSNTTAGGVAAGSGIGPAHIDYILGIVKAYST RVGAGPFPTELNDEIGSYLSETGKELGATTGRKRRTGWLDIVAVRRAVQINSLSGFCL TKLDVLDGLDEIKICTGYKNKKGKEIANTPSSIEIWQTIEPIYETLPGWSEKTHRVTE YEKLPQNARSYIEHIEKLTGIPVDIISTGAERSETIIRRNPFNT" gene 176831..177508 /locus_tag="REG_0201" CDS 176831..177508 /locus_tag="REG_0201" /inference="protein motif:PFAM:PF06693" /note="COG5463; similar to AA sequence EcoGene EG11164; similar to AA sequence GI 152112370" /codon_start=1 /transl_table=11 /product="conserved outer membrane protein" /protein_id="EFL92438.1" /db_xref="PFAM:PF06693" /translation="MKRSKNINREKFRKSWRYYRLAPLALSMSAVFILTGCEQTDETV AMYQNADDCSKANPSGANQCAKAYHDALKEAERTAPKYASRADCVAEFGENQCIQPPT STPAPAQAGGTTATEGSSPWMPLLAGYMMGRLMGGGGSPQPLFTSQAPNSPANGKFVD ASGKSYGAATPGRTMTVPKTAMAPKPTVTNTITRGGFGESVAKQASMQRKNERTSSSS RVRSMGS" gene 177519..178679 /locus_tag="REG_0202" CDS 177519..178679 /locus_tag="REG_0202" /inference="protein motif:PFAM:PF03738" /note="COG0754; similar to AA sequence EcoGene EG11165; similar to AA sequence GI 123443852" /codon_start=1 /transl_table=11 /product="Glutathionylspermidine synthase" /protein_id="EFL92439.1" /db_xref="PFAM:PF03738" /translation="MKRVEISERPDWREKANEYGFDFHTMYDQPYWCEDAYYQFSSAQ IEELEDTSVELHERCLDVVEKVIHSDKLLTKFSIPQHCWSFLRASWHPRQPCLYSRLD LAYDGKNPAKLLENNADTPTSLYETAFFQWMWLEDQIKAGHLPVNADQYNSLQDKLIE RFIELKEKAGFHSLHLTCCQDSAEDRATVKYLEDCAQEAGLSTNFLFINEIGIEEKGQ FIDLDDRVICNFFKLYPWEFMFRDEFSTNLGNAGARWLEPAWKSIISNKALLPLLWEM FPGHLNLLPAYFADDDHPPMDSYVIKPLFSREGANIQIIKNGQQVLQVDGPYGKEGMI VQQFHSSPKFGENYTLIGSWLVNDKPCGIGLREDRSLITQDLSRFYPHIILD" gene complement(178666..179412) /gene="ribB" /locus_tag="REG_0203" CDS complement(178666..179412) /gene="ribB" /locus_tag="REG_0203" /inference="protein motif:PFAM:PF00926" /note="COG0108; similar to AA sequence EcoGene EG10465; similar to AA sequence GI 157372519" /codon_start=1 /transl_table=11 /product="3,4-dihydroxy-2-butanone 4-phosphate synthase" /protein_id="EFL92440.1" /db_xref="PFAM:PF00926" /translation="MRANTLSQQRSGFKGEGYNSVVTTCNGSFNEVFAVNQSPLFEFG DAPKRVKQALDALREGRGVMVLDDENRENEGDIIFAAETMTEEQMALTIRHGSGIVCL CITDERRKQLELPMMVSQNSSQFQTAFTVTIEAAKGVTTGVSAADRLKTIQAAIADNA KPTDLHRPGHVFPLRAEAEGVIKRRGHTEAAIDLAQLAGFNPFGVLCELTNDDGSMAR MPEVIQFAKQHNMPVLTIEDLVGYRLANLK" gene 179656..180027 /locus_tag="REG_0204" CDS 179656..180027 /locus_tag="REG_0204" /inference="protein motif:PFAM:PF04380" /note="N terminal truncations; COG2960; similar to AA sequence EcoGene EG13031; similar to AA sequence GI 209910067" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92441.1" /db_xref="PFAM:PF04380" /translation="MARILYYARSLLYSHYRVVSLREAYMFGLKIVEMITKKVQGSLP ETANRFKDNIEKKVGNALQAQLPRLNLINREEFDVQSKILSDTSEKLALLERKLEALE AKLGSDTPEAQSSSDIEKTIP" gene complement(180193..181147) /gene="yhbE" /locus_tag="REG_0205" /note="Permeases of the drug/metabolite transporter (DMT) superfamily; similar to COG0697; similar to GI 77960210; EcoGene EG11499" /pseudo gene 181499..182620 /gene="pdxB" /locus_tag="REG_0206" CDS 181499..182620 /gene="pdxB" /locus_tag="REG_0206" /inference="protein motif:PFAM:PF00389" /note="COG0111; similar to AA sequence EcoGene EG10692; similar to AA sequence GI 22125492" /codon_start=1 /transl_table=11 /product="erythronate-4-phosphate dehydrogenase" /protein_id="EFL92442.1" /db_xref="PFAM:PF00389" /translation="MKILVDENMPHAKQLFQRIGNFEIVSGRAIPRTALCEASALMVR SVTSVNAELLQDTAIKFVGTATAGTDHVDKAWLRQQGIDFFSAPGCNAIAVVEYVFSA LLAMAERGNFSLSGKTVGIVGVGNVGSRLNARLKALGIKTLLCDPPRADRGDKEQFWP LEKLVREADILTLHTPLHQTGAYQSFHLINDDVLAALPDDRILINTCRGAVVDNAALL QGLKKGKKLGVVLDVWENEPHISQPLLEKVAIGTPHIAGYTLEGKTRGTTQLFEAFSR FCKCPQSVECSSLLPPSKLGHFRLDSPLNEKQLKRLMQLVYDVRLDACNLRCKGTREF DDLRKRYGIRREWSSFCIQCDSMADADLLQKIGFSIEMI" gene 182627..182986 /gene="truA-1" /locus_tag="REG_0207" /note="pseudouridylate synthase I; interrupted by IS element; similar to COG0101; similar to GI 183599662; EcoGene EG10454" /pseudo mobile_element 182984..183902 /mobile_element_type="insertion sequence:ISRin1" gene 183053..183490 /locus_tag="REG_0208" CDS 183053..183490 /locus_tag="REG_0208" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92443.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 183499..183876 /locus_tag="REG_0209" CDS 183499..183876 /locus_tag="REG_0209" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92444.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 184047..184385 /gene="truA-2" /locus_tag="REG_0210" /note="pseudouridylate synthase I; interrupted by IS element; similar to COG0101; similar to GI 123441645; EcoGene EG10454" /pseudo gene 184423..185085 /gene="dedA" /locus_tag="REG_0211" CDS 184423..185085 /gene="dedA" /locus_tag="REG_0211" /inference="protein motif:PFAM:PF09335" /note="SNARE associated Golgi domain; COG0586; similar to AA sequence EcoGene EG10216; similar to AA sequence GI 77957381" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92445.1" /db_xref="PFAM:PF09335" /translation="MDIIVFIIDFILHIDVHLAELVAQYGVWVYGILFLILFCETGLV VTPFLPGDSLLFAAGAFATLPSNDLNVHLMVALMVIAAITGDALNYTLGRRFGKKLFQ DPTSKIFRQVYLDKTHLFYEKYGAKTIILARFAPIIRTFAPFIAGMGKMSYRHFTAYN VIGALVWVVSFTYAGYLFGNLPIVQKNLKLFIVMIIILSILPAILEIYRHRRTVADQK NQ" gene 185183..186154 /gene="accD" /locus_tag="REG_0212" CDS 185183..186154 /gene="accD" /locus_tag="REG_0212" /note="COG0777; similar to AA sequence EcoGene EG10217; similar to AA sequence GI 158834047" /codon_start=1 /transl_table=11 /product="Acetyl-CoA carboxylase beta subunit" /protein_id="EFL92446.1" /translation="MSWIERIINKSTLEACKANIPEGVWTKCDSCEQILYRIELQKNL EVCPKCDHHMRISARERLDLLLDKPCDGSCKKECREEACTTKCKKARIELGAELEPKD PLKFKDNKKYKDRLTAAQKMTKEKDALVVMKGTLFDMLIVTAAFDFSFMGGSMGSVVG ARFVAAVEQALTDHCPLVCFSTSGGARMQEGLISLMQMAKTSAALAKMQERGLPYISV LTNPTMGGVSASLAMLGDINIAEPKALIGFAGPRVILQTVREVLPPGFQSSEFLIEKG AIDMIVRRLDMRQTLASILSKLMHIPTVLQVAASRPGRETDERRHIT" gene 186443..187705 /gene="folC" /locus_tag="REG_0213" CDS 186443..187705 /gene="folC" /locus_tag="REG_0213" /note="COG0285; similar to AA sequence EcoGene EG10327; similar to AA sequence GI 22125497" /codon_start=1 /transl_table=11 /product="bifunctional folylpolyglutamate synthase/ dihydrofolate synthase" /protein_id="EFL92447.1" /translation="MNNYQLPQTPSSLTSWLSYIGSIHYQAIDLSLERIRTVAERLDL LKPAAKILTFAGTNGKGTTCCVLEAILLSAGLRVGVYSSPHLLRYTERIRIQGLELPE TAHCNSFADIEAARGTVSLTYFEFSTLSALHLFKQAALDVLVLEVGLGGRLDATNIID SDVAAITSIGLDHTDRLGADRESIGREKAGIFRRGKPAIVGEPDMPHSVATIAAEIEA KLYHCNDDWQFSRQTDDWCWQSGSRVLTHLPLPKVPLQNAATALAILHYLALPLNDSA IYQGLQTAFLPGRFQILTEQPLLILDVAHNSHAARYLIERFDQLPKRSGKIRAVVGML ADKDIASTLTCLSERVDEWYCVSLTEPRGASAELLAQHVSKPRLFADVESGWYQAMKD ADSQDVVIVCGSFHTVAQVMTAYYSLRL" gene 187824..188381 /locus_tag="REG_0214" CDS 187824..188381 /locus_tag="REG_0214" /inference="protein motif:PFAM:PF05036" /note="COG3147; similar to AA sequence EcoGene EG10218; similar to AA sequence GI 218548231" /codon_start=1 /transl_table=11 /product="sporulation related domain-containing protein" /protein_id="EFL92448.1" /db_xref="PFAM:PF05036" /translation="MPLNKISDKLVARESPVANQFKNRLVGTIILVVLGVTVLPMLFD GKKKHYEDQFIAIPLVSTVDFLEEHDVVMPVNQFFPAQQPEEIVAELNPQLPPLKENA LTKPSYVVQLGALKNAAKVNEIVAKLRLSGYNAYTLPAIPLQGQITRIMVGPSVSKQK LQLTLPELNSLSGLDGQVKEYGVGF" gene 188402..188893 /locus_tag="REG_0215" CDS 188402..188893 /locus_tag="REG_0215" /inference="protein motif:PFAM:PF02674" /note="COG1286; similar to AA sequence EcoGene EG10169; similar to AA sequence GI 22125499" /codon_start=1 /transl_table=11 /product="colicin V production domain-containing hypothetical protein" /protein_id="EFL92449.1" /db_xref="PFAM:PF02674" /translation="MIMTWIDYVIVSIIGFSALISLKRGFVREALSLVIWGCAFYIAS HFYQYLAVYLTGFENELIRQGIAIGILFIATLVVGAIVNSVISSLVMSTGLSGTDRVL GVFFGVLRGVFIVSVVLFFLDTFTGFAQSMDWKNSLLIPKFSEIIKWLFNYLQSTSSF LPN" gene 188931..190460 /gene="purF" /locus_tag="REG_0216" CDS 188931..190460 /gene="purF" /locus_tag="REG_0216" /inference="protein motif:PFAM:PF00310" /note="COG0034; similar to AA sequence EcoGene EG10794; similar to AA sequence GI 123441651" /codon_start=1 /transl_table=11 /product="glutamine phosphoribosylpyrophosphate amidotransferase" /protein_id="EFL92450.1" /db_xref="PFAM:PF00310" /translation="MCGIVGITGFTSVNQSIYDALMVLQHRGQDAAGIVTLDENNRFR LRKANGLVKDVFETRHMLRLQGTCGIGHVRYPTAGSASVSEAQPFYVNSPFGITLAHN GNLTNASELKDYLFKQKRRHINTTSDSEILLNIFASELETEEKKEEEAIFSAVKRTHE LVKGAYACVAMIIGHGMLAFRDPNGIRPLVMGKRKHILEDGNVKYEYMVASESVALDT LGFELCRHVAPGEAVYITEKGELFYRQCAKNPQYRPCLFEYVYFARPDSCIDKISVYS ARISMGKKLGNKIKNSEEWNNLAIDVVIPIPETSCDIALEIAHILGKPYRQGFVKNRY VGRTFIMPGQQERSKSVRRKLNVNRAEFYDKNVLLVDDSIVRGTTSKQIVQMAREAGA KNVYFASAAPEISFPNVYGIDMPSANELVANNRTPDDLKKFIGADALIFQDLEDLKAA VTEGNPDITEFECSVFDGNYVTKDVNKEYLKYLQSLRSDDAQALSQQHEAENLEMYNE G" gene 190540..191118 /gene="ubiX" /locus_tag="REG_0217" CDS 190540..191118 /gene="ubiX" /locus_tag="REG_0217" /inference="protein motif:PFAM:PF02441" /note="COG0163; similar to AA sequence EcoGene EG11044; similar to AA sequence GI 77975504" /codon_start=1 /transl_table=11 /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase" /protein_id="EFL92451.1" /db_xref="PFAM:PF02441" /translation="MMKRLIVGISGASGTIYGVRLLEVLKDVDEVETHLIMSNGAEQT LAAEMKDITVKEVQGLANVVHKVGDLAASVSSGSYKTLGMVILPCSIKTLSGIVHSYT DNLLTRAADVVLKERRCLLLCVRETPLHLGHLRLMSQAAELGAVIMPPSPAFYHVPQT IKDIVDQSVNRIIDQFDIPLPKDLFKRWQGNN" gene 191352..192059 /gene="hmp_1" /locus_tag="REG_0218" CDS 191352..192059 /gene="hmp_1" /locus_tag="REG_0218" /inference="protein motif:PFAM:PF00042" /note="fused with hmp_2 in E. coli; COG1017; similar to AA sequence EcoGene EG10456; similar to AA sequence GI 123441393" /codon_start=1 /transl_table=11 /product="hemoglobin-like flavoprotein" /protein_id="EFL92452.1" /db_xref="PFAM:PF00042" /translation="MLDSQTIAVVKSTIPLLVATGSKLATHFYERMFTNNPEFKNIFN MSNQFNGNQSEALFNAICAYANNIENIKALLPAVERVAQKHTSLNIQPEYYQVVGEHL IATLDEMFHPGAEVLDAWAKAYGVLAEIFIQREEQIYQKGETSTGGWRSLRRFRIIKK VRESEIICSFEFMPLDGDCVADFKPGQYLSIYIEDDSLAFQKIRQYSLTTAANGKSYR IAVKREAGGNCLKLFAP" gene 192007..192543 /gene="hmp_2" /locus_tag="REG_0219" CDS 192007..192543 /gene="hmp_2" /locus_tag="REG_0219" /note="fused with hmp_1 in E. coli; COG1018; similar to AA sequence EcoGene EG10456; similar to AA sequence GI 77963400" /codon_start=1 /transl_table=11 /product="family 1 flavodoxin reductase" /protein_id="EFL92453.1" /translation="MLLNARRGGTVSNYLHHKLQEGDIIRVSPPRGDFFLDVESNTPV ALISAGVGQTPMLSMLNTLYLSQHKASVYWLHASENGRVHAFSNEVATIAEKMPNLNS HIWYREPTEQDVRGIDYHTQGLMDLANHQSMIFDNDMHYYFCGPVQFMQYLSRQLITM GVKTEKMHYECFGPHKII" gene 193074..194616 /locus_tag="REG_0220" /note="16S ribosomal RNA, operon 4" rRNA 193074..194616 /locus_tag="REG_0220" /product="16S ribosomal RNA" gene 194721..194797 /locus_tag="REG_0221" /note="tRNA-Ile3" tRNA 194721..194797 /locus_tag="REG_0221" /product="tRNA-Ile" gene 194889..194964 /locus_tag="REG_0222" /note="tRNA-Ala3" tRNA 194889..194964 /locus_tag="REG_0222" /product="tRNA-Ala" gene 195069..197981 /locus_tag="REG_0223" /note="23S ribosomal RNA, operon 4" rRNA 195069..197981 /locus_tag="REG_0223" /product="23S ribosomal RNA" gene 198051..198170 /locus_tag="REG_0224" /note="5S ribosomal RNA, operon 4" rRNA 198051..198170 /locus_tag="REG_0224" /product="5S ribosomal RNA" gene 198771..200078 /gene="tig" /locus_tag="REG_0225" CDS 198771..200078 /gene="tig" /locus_tag="REG_0225" /inference="protein motif:PFAM:PF05697" /note="COG0544; similar to AA sequence EcoGene EG11003; similar to AA sequence GI 77956938" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis/trans isomerase (trigger factor)" /protein_id="EFL92454.1" /db_xref="PFAM:PF05697" /translation="MQVSIETTQGLGRRATITLIADPIEAAVKNRLIKKAQNVRIDGF RKGKAPMDIVKRHYSVEVLQYVLGDMMERNFFDVIEKENINLASPPSYFPGEYKTGEN FSYSVEFEVYPDIELKNLEDIEIETPVVEINDADVDTMLETLRKQQASWQENNDVVKA EDHRVTIDFTGSIDGVEFEGGSETDSILVMGENKMIPGFEEGILDHKTGDKFVIEANF PEDYQVEKLRGKLASFAIVLKKIEVRQLPELTEELIKKLGIVDGSLVNLRGEVRKNME RELKNTVRNSIKTKLIEELLKSNEIDVPKALVEKEIDALHGQVIRRFSDNKTLMSGLP RKLFEEKARQRVVVGLLFAEIISKNDLKVDKVLLGKRLSEIASAYENPQQVIDYYNNN EELLNNIRSAILEEQAVEYILDKVKVIDKKMNFTELMSQALTM" gene complement(200273..201004) /gene="coaE" /locus_tag="REG_0226" CDS complement(200273..201004) /gene="coaE" /locus_tag="REG_0226" /note="COG0237; similar to AA sequence EcoGene EG12312; similar to AA sequence GI 22124670" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase" /protein_id="EFL92455.1" /translation="MVIKKEETISIKIYRVNISVILTIMLTCNEKPKDILLMTYVVAL TGGIGSGKSTVADAFANLGVPLIDADVIARQVVQLGTDALSQIVTRYGNNILLADGSL NRAVLRQKIFSEQQEREWLNSLLHPLIQQETQRRITATKEPYLIWVIPLLIENNLFSQ ADRVLLVDVDKEIQLTRITSRDNITRQQAKQILSAQTTQKERLACADDVINNNGNFVE LSSMVSILHQQYLDFLLLPNLTKKF" gene 201079..203073 /gene="htpG" /locus_tag="REG_0227" CDS 201079..203073 /gene="htpG" /locus_tag="REG_0227" /note="COG0326; similar to AA sequence EcoGene EG10461; similar to AA sequence GI 211639193" /codon_start=1 /transl_table=11 /product="HSP90 molecular chaperone" /protein_id="EFL92456.1" /translation="MSTKNQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDA ADKLRFRALSKPELYEGDTDLRVRVSVNKEKRTLTISDNGIGMSRDEVIDNLGTIAKS GTKAFLESMGSDQSKDSQLIGQFGVGFYSAFIVADKVTVCTRAAGEPVDAGVLWESSG EGDYTIATITKEARGTEITLHLREGEDAYLDNWGIRSIISKYSDHIALPVEIENRTKV EKAVEAKKDENAEADQESVIDAEATDDAAQDPATPTETEETVTWEQINKAKALWLRSK NEIKEAEYNELYKHISHDFVDPLLCSHNRVEGEQEYTSLLYIPAQAPWDMWNREHKHG LKLYVQRVFIMDDAEQFLPNYLRFVRGLIDSNDLPLNVSRELLQDNKITQSLRSALTK RVLKMLAKLAKDDSEKYQKFWLQFGKVLKEGPAEDYANKESIAKLLRFASTHNDSSEQ TVSLEEYIARMSSEQDKIYFITADSYDAAKSSPHLELFRKKGIEVLLLSDRVDEWMMG YFTEFERKKLHSVSKADDSINKLADEEKKPEQKEAEKALEPFVKRVKELLGDKVKEVR LTHRLTETPAIVTTDSNEMGTQMAKLLAAAGQKAPEVKYIFELNPDHLLVKRVADMSD DKQFAEWINLFLDQALLAERGTLDDPNCFARRINQLLLSL" gene 203181..203996 /gene="dapD" /locus_tag="REG_0228" CDS 203181..203996 /gene="dapD" /locus_tag="REG_0228" /note="COG2171; similar to AA sequence EcoGene EG10207; similar to AA sequence GI 82775556" /codon_start=1 /transl_table=11 /product="2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" /protein_id="EFL92457.1" /translation="MQQLQTVIEQAFDLRTEPDKIDSSARIVINQMINELDTGLLRVA EKINGQWITHQWLKKAVLLSFLINENQLISGAETHYYDKIPLKFSNHDTARFQLEGVR VVPPASVRKGAFVAPGAILMPSYVNIGAFIDEGSMVDTWATVGSCAQIGKNVHLSGGV GIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEENTVISMGVYLGQSTRIYDRETK KISYGRIPAGSVVVSGTLPSQEGDHSLYCAIIVKKVDAKTRAKTSINELLRIT" gene 204162..204237 /locus_tag="REG_0229" /note="tRNA-Lys1" tRNA 204162..204237 /locus_tag="REG_0229" /product="tRNA-Lys" gene complement(204650..205071) /gene="slyA" /locus_tag="REG_0230" /note="DNA-binding transcriptional activator; similar to COG1846; similar to GI 77979553; EcoGene EG13408" /pseudo gene complement(206128..207883) /locus_tag="REG_0231" /note="ISRin5 putative transposase, pseudogene; similar to COG3039; similar to GI 157411373" /pseudo mobile_element complement(206801..207954) /mobile_element_type="insertion sequence:ISRin5" gene 208197..208640 /gene="codB_1b" /locus_tag="REG_0232" /note="cytosine permease, pseudogene; similar to GI 123442229; EcoGene EG11327" /pseudo mobile_element 209113..209186 /note="partial element" /mobile_element_type="insertion sequence:ISRin2" mobile_element complement(209184..209397) /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene complement(209209..209421) /locus_tag="REG_0233" /note="ISRin2, transposase orfB, pseudogene; similar to GI 30249527" /pseudo mobile_element 209388..211440 /mobile_element_type="insertion sequence:ISRin6" gene 209531..210157 /locus_tag="REG_0234" CDS 209531..210157 /locus_tag="REG_0234" /note="COG4584; similar to AA sequence GI 183598505" /codon_start=1 /transl_table=11 /product="ISRin6, transposase orfA" /protein_id="EFL92458.1" /translation="MSSVGVFLPLSCRFIDEQITMSAFRISMRKLKEILRLKYRCQLS HRQIAKSLSVSPSVVSRYLNQAAQLGIRDYPLSPEWNELNLRAAFKQTPVKKKKSSLP DWSLICQELKHKIMTLQLLYEEYQQQNPANHYRYAHFAASTKAGSKCNPRRCDKPTKR EKSCSSIIVAPPSTSLTPKRVNSAQLRCLWRFSGRQITPMPKLPGVNA" gene 210219..211361 /locus_tag="REG_0235" CDS 210219..211361 /locus_tag="REG_0235" /note="COG4584; similar to AA sequence GI 114562730" /codon_start=1 /transl_table=11 /product="ISRin6, transposase orfB" /protein_id="EFL92459.1" /translation="MPDNLKSGIDKACRYEPDLNPTYQQLAYHYDTVVVAARPYKPKD KAKVEVAVQIVERWIMAKLRRETFYSLKALNQRIQELLIELNNKPMKKRPGSRLSQFQ QIDKPVLKPLPRLPYRYTQVTQVRVQMDYHVEVDKHYYSVPHTLLKQKLEAHVSGELV NLFHRGELVAVHPRSHDVGGHSTLENHMPEAHKQQGRWTASRVDYSASRQLDKATIRS LTQGEWLKHHQNILITGATGCGKTWLACALGHHYCQQGMSVFYFRLKQLLAQMYLAQA QGSYRKLLDTLANCSLLLLDDWGLEPLNSQQRGDLLELIDARYDRTSTLITSQLPVAN WYQMIGESTHADAILDRLLHNAIKLELKGESMRKSMNKLTQGDHSG" mobile_element 211441..211690 /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene 211488..211679 /locus_tag="REG_0236" /note="ISRin2, transposase orfB, pseudogene; similar to GI 30249527" /pseudo gene complement(211721..212713) /gene="poxA" /locus_tag="REG_0237" CDS complement(211721..212713) /gene="poxA" /locus_tag="REG_0237" /inference="protein motif:PFAM:PF00152" /note="COG2269; similar to AA sequence EcoGene EG11211; similar to AA sequence GI 77973371" /codon_start=1 /transl_table=11 /product="putative lysyl-tRNA synthetase" /protein_id="EFL92460.1" /db_xref="PFAM:PF00152" /translation="MNNNKDLRWRPSASIDHLKKRARILAKIRQFFAENNVMEVETPA LSQATVTDIHLFPFQTQFIGPGAAAGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFR NEEAGCHHNPEFTMLEWYRPGYDMQKLIDEVDKLLQLILCCKPAEQLSYQQAFIRYLE IDPLTANNQALRAVARRPALSHIADIADNEESRDTLLQLLFVSGIEPRIGHDKPVFVY HYPASQSALARINPDDPRVAERFEVYYKGIELANGFDELTDSAEQRQRFENENNQRVN LGLAPASIDENLIAALQHGLPACSGVALGVDRLIMLALNAKKISEVMAFTVESA" gene complement(212851..213840) /gene="talB" /locus_tag="REG_0238" CDS complement(212851..213840) /gene="talB" /locus_tag="REG_0238" /note="COG0176; similar to AA sequence EcoGene EG11556; similar to AA sequence GI 165927350" /codon_start=1 /transl_table=11 /product="Transaldolase" /protein_id="EFL92461.1" /translation="MMRSHNMIDKLTSLRQLTTVVADTGDIAMIRRYQPQDATTNPSL ILQAIQLPEYRQLIEQTLHWARDNSLDPCQQVIDASDKLVVNIGLAILSLIPGRISTE VDARLSYDTQACVTKAKRLIAFYNEAGISNDRILIKLAATWQGIRAAEILEKEGINCN LTLLFSFAQARACAEAGVYLISPFVGRILDWYKSHTDKKEFTPQNDPGVVSVTKIYQY YKQHNYKTVVMGASFRNIGEIIELAGCDRLTISSSLLQELAMSEGSLERKLFYQGEIK TRPAPLTETEFYFQHNQDPMAVDKLAEGIRNFAIDQEKLEQIITDQLSIPTAL" gene complement(213812..215605) /gene="proS" /locus_tag="REG_0239" CDS complement(213812..215605) /gene="proS" /locus_tag="REG_0239" /note="COG0442; similar to AA sequence EcoGene EG10770; similar to AA sequence GI 22126985" /codon_start=1 /transl_table=11 /product="Prolyl-tRNA synthetase" /protein_id="EFL92462.1" /translation="MRTSQYLLATQKEIPADAESISHKLMLRAGMIQQVTSGLYTWLP TGLRVLKKVENIVREEMNNAGAIEVSMPMVQPADLWQESGRWDKYGLELLRFVDRHER HFVLGPTHEEVITALVRNQIKSYKQLPLNLFQIQTKFRDEVRPRFGVMRAREFLMKDA YSFHTTQESLQKTYDTMHATYSKIFSRIGLDFRAVQADTGSIGGSRSHEFQVLADSGE DDIVFSTTSNFAANIELAKAVAPTQSRAEATEALRIIDTPHVKTIADLVTQFKMPIEK TVKTLLVRAAKGSGHKLIALLLRGDHDLNKTKIEKLSAKKLSQVAVPLAFADKEEIRA ALGAGSGSLGPMNLNLPIIADHSVAVMNDFSAGANIDGKHYFGINWERDLPLPQVADI RNVVVGDASPDGQGTLLLKRGIEVGHIFQLGTQYSKIMNATIENKEGKKQAITMGCYG IGVSRIVAAAIEQNYDEDGILWPEAIAPFQVAILPMNMHKSFRVQEQAEALYKALSDH GVEVILDDRCERPGVMFTDMELIGVPNSIVISERNHDNQEVEYKNRRSGETQMIKSDK IIDFLIAQITKHRVPCQPSSAIHDEKSQHDR" gene complement(215807..216751) /gene="metQ" /locus_tag="REG_0240" CDS complement(215807..216751) /gene="metQ" /locus_tag="REG_0240" /note="COG1464; similar to AA sequence EcoGene EG11504; similar to AA sequence GI 22126982" /codon_start=1 /transl_table=11 /product="DL-methionine transporter substrate-binding subunit" /protein_id="EFL92463.1" /translation="MFIKSIAVISALLGSLIIAGCDSKEPSDVKEPNDIKVGIVVGAE KQLAEVAKKVAKEKYNLDVTLVDFNDYVLPNEALNKGEIDVNAFQHKPYLEQQIKDRG YKLAPVGKTFIYPIAAYSKKIKSPDESQIAGATNDSTNAVESPDESQSESQIAEANDS TNKKPLDELLQPGSQIAVANDPTNLGRSLLLLQKEGLIKLKEGVGLLPTVLDIVENPK ELKLVELDAPQLPHSLDDQQITLAIINNTYASQIELRPAKDGLFVEDTSSPYVNLIVA REDNKDADNVKKFVQAYQSEEVIEAANQIFNGGAVKGW" gene complement(216817..217470) /gene="metI" /locus_tag="REG_0241" CDS complement(216817..217470) /gene="metI" /locus_tag="REG_0241" /note="COG2011; similar to AA sequence EcoGene EG11737; similar to AA sequence GI 157371989" /codon_start=1 /transl_table=11 /product="DL-methionine transporter permease subunit" /protein_id="EFL92464.1" /translation="MSEAMIWLMCRSIWETVIMTSVSGFFGFVIGLPIGVLLYVTRPG QIIANNMLHKLLSTLVNVFRSIPFIILLVWMIPFTRLMVGTSIGLQAAIVPLTVSAAP FIARMVENALLEIPMGLIEAARAMGATPLQIISKVLLPEALPSLVNAATITLITLVGY SAMGGAIGAGGLGQIGYQYGYIGYNATVMNSVLVLLVLLVCLIQYVGNHMVKRLNHK" gene complement(217463..218683) /gene="metN" /locus_tag="REG_0242" CDS complement(217463..218683) /gene="metN" /locus_tag="REG_0242" /note="COG1135; similar to AA sequence EcoGene EG11621; similar to AA sequence GI 77972742" /codon_start=1 /transl_table=11 /product="DL-methionine transporter ATP-binding subunit" /protein_id="EFL92465.1" /translation="MKPPRCWLRGSPESRSLSTLIGLTPWPPSGNFKGKGYICQLAAD FIFHRTIYSAIEAYNSKNNMIRFLHISKVFQQGSRVINALSDVNFHVPAGQIYGVIGS SGAGKSTLIRCANMLERPTSGQVLIDRQDLTKLSDWQLMKNRRQIGMIFQHFNLLSSR NVFDNIALPLELNNLPKAEIKKRVSELLALVGLIDKQYTYPINLSGGQKQRVAIARAL ANNPKILLCDEATSALDPATTRSILKLLKDINRRLGLTILLITHEMDVVKCICDQVAI IDAGKLIEQNSVSEIFSHPQTPLAQQFIQSTLHLDIPDDYTQRIQMQPTTDNVLLLKL AFTGQSVNAPLISQAVRKFDIDISILSSQIDYAGGVKFGVMLAEIHGLEQNRSAAIAF LQHHHVKIEVLGYV" gene 219156..220698 /locus_tag="REG_0243" /note="16S ribosomal RNA, operon 3" rRNA 219156..220698 /locus_tag="REG_0243" /product="16S ribosomal RNA" gene 220801..220876 /locus_tag="REG_0244" /note="tRNA-Glu2" tRNA 220801..220876 /locus_tag="REG_0244" /product="tRNA-Glu" gene 220983..223895 /locus_tag="REG_0245" /note="23S ribosomal RNA, operon 3" rRNA 220983..223895 /locus_tag="REG_0245" /product="23S ribosomal RNA RN" gene 223965..224084 /locus_tag="REG_0246" /note="5S ribosomal RNA, operon 3" rRNA 223965..224084 /locus_tag="REG_0246" /product="5S ribosomal RNA" gene 224147..224223 /locus_tag="REG_0247" /note="tRNA-Asp2" tRNA 224147..224223 /locus_tag="REG_0247" /product="tRNA-Asp" mobile_element complement(224342..225261) /mobile_element_type="insertion sequence:ISRin1" gene complement(224368..224745) /locus_tag="REG_0248" CDS complement(224368..224745) /locus_tag="REG_0248" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92466.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(224754..225191) /locus_tag="REG_0249" CDS complement(224754..225191) /locus_tag="REG_0249" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92467.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene complement(225351..227012) /gene="pgi" /locus_tag="REG_0250" CDS complement(225351..227012) /gene="pgi" /locus_tag="REG_0250" /note="COG0166; similar to AA sequence EcoGene EG10702; similar to AA sequence GI 123444047" /codon_start=1 /transl_table=11 /product="Glucose-6-phosphate isomerase" /protein_id="EFL92468.1" /translation="MKNINPSETKAWKALQQHFAEMKKIHIRDLFKENAERFSQFSIT IEDEMLVDYSKNRINAETMKKLQALATETHLKDAIDSMFSGEKINRTEDRAVLHTALR NRDNHPVLLDGKDVMPEVNKVLARMEEFCKCVIEGEWKGYSGKAITDVVNIGIGGSDL GPYMVTEALAHNKNHLHMHFVSNIDGTHIIETLKKLNPETTLFLIASKTFTTQETMTN AHSAREWLLKTVKEKSDIAKHFVALSTNSEAVSKFGIDTRNMFEFWDWVGGRYSLWSA VGLSIALSIGFENFKNLLEGAHAMDKHFKEAPAEKNAPVLLALIGIWYNNFFGAETEA ILPYDQYMHRFPAYCQQGNMESNGKCVDRDGKRVTYQTGSIIWGEPGTNGQHAFYQLI HQGTKMIPCDFIAPAISHNPLNNHHDILLSNFFAQTEALAFGKTCPEEIEVEKKTTAT DKKPEQITEVIPCKEFEGNKPTNSILLREINPFNLGMLIALYEHKIFTQGAILNIFSF DQWGVELGKQLANNILPVLRNNEKISTNDGSTNALINQFKKWRKN" gene 227287..228021 /gene="gmk" /locus_tag="REG_0251" CDS 227287..228021 /gene="gmk" /locus_tag="REG_0251" /note="COG0194; similar to AA sequence EcoGene EG10965; similar to AA sequence GI 77962007" /codon_start=1 /transl_table=11 /product="Guanylate kinase" /protein_id="EFL92469.1" /translation="MTQGTLYIVSAPSGAGKSSLVQALLQTQSLDTFARDLGVAQSDD EQQKAQTSAKIVVGGSRPLCNMKVSISHTTRAKRAEEKHGEHYFFISEKDFCQMIDND AFLEWAKVFGNYYGTAAAVVEQNLSNGIDVFLDIDWQGARNVRLKKPEARSIFILPPS EEELYRRLRQRAQDSEEIIAKRMAQAVSEMSHCVEYDYLIVNDKFDVALSDLRAIICA DKLHLNRQKEHYATLIEKLTGREPRQ" gene 228294..228485 /locus_tag="REG_0252" CDS 228294..228485 /locus_tag="REG_0252" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92470.1" /translation="MNFELRQGGKGDRSMSVDMLPDEASTRSQRRRNLKGEGYIMSCY LITFIWSNTLWHELLFKTL" gene 228440..228721 /gene="rpoZ" /locus_tag="REG_0253" CDS 228440..228721 /gene="rpoZ" /locus_tag="REG_0253" /note="COG1758; similar to AA sequence EcoGene EG10899; similar to AA sequence GI 145601106" /codon_start=1 /transl_table=11 /product="RNA polymerase omega subunit" /protein_id="EFL92471.1" /translation="MEQYIMARVTVQDAVEKIGNRFDLVLVAARRARQLQQARGKGSL VPEENDKVTVTALREIEAGLITNAILDGLECQEREGNQMVSFNENYTNL" gene 228699..230843 /gene="spoT" /locus_tag="REG_0254" CDS 228699..230843 /gene="spoT" /locus_tag="REG_0254" /note="COG0317; similar to AA sequence EcoGene EG10966; similar to AA sequence GI 77976741" /codon_start=1 /transl_table=11 /product="bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase" /protein_id="EFL92472.1" /translation="MKIIPTFKCESVLYLFASLAPLIQCYLPKEQIKRLEQAYCVARD AHQGQARSSGEPYITHPVAVACILAEMRLDYETLMAAFLHDVIEDTSVTYHDMEQLFG KSVAELVEGVSKLDKLTFRDRREAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLH SLRPDKRRRIARETLEIYSPLAHRLGIHHLKIELEELGFEALYPNRYRVIKEVVKAAR GNRKEMIQKILSEIKGRLTEVNIPCRVIGREKHLYSIYCKMNLKEQRFHSIMDIYAFR ITVKEIDTCYRVLGQMHSLYKPRPGRIKDYIAIPKANGYQSLHSSLIGPHGVPVEVQI RTEDMDQMAEMGVAAHWAYKARTQNGLGTTAQIRAQRWMQSLLELQQSAGSSFEFIES VKSDLFPDEIYVFTPEGKIVELPANATPVDFAYAVHTDIGNACVGSRVDRQPYPLSQS LNSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRDESICLGRRLLHHAL GCGRKLVDIPAKNIQKELDRMKLASIDDLLAEIGLGNAISVVIAKNLEGGAVNIGTSG NRKLPIKDANGVLVTFAKCCRPIPGDPIIAHISPGKGLVIHHESCRNIRGYQKEPEKF MAVEWDKYSEQEFITEIKVEMFNQQGVWANLTSVINAAQSNIQGLNTEEKDGRIYSAF IRLTIRNRVHLANIMRKIRIMPDVVKVSRNRN" gene 231143..233236 /gene="recG" /locus_tag="REG_0255" CDS 231143..233236 /gene="recG" /locus_tag="REG_0255" /note="COG1200; similar to AA sequence EcoGene EG10829; similar to AA sequence GI 153947523" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase" /protein_id="EFL92473.1" /translation="MKGRLLDTVPLSSLTGVGASQAAKLTKIGLETVQDLLLHLPLRY EDRTHLYHITDLLPGLTATIAGKILSSEISSGRRAMLTSRLDDGSGVVILRFFNFNTS MKNSLSAGKHIVAYGEVKQGRNGLEIIHPEYRTYDEDKGIRLQYSLTPIYTSTEGLRQ STLRNLINQALNLLDTFTVAELLPVEVCDSFVSLSTAIHTLHRPSADISLIDLEKGQH PAQRRLILEELVAHNLSMLAARAGTKDYQAQPLPPSTVSHDTLKARFLAALAFHPTHA QQRVVDEIEQDLLRTFPMMRLIQGDVGSGKTLVAALAALRAIAQGKQVALMAPTELLA EQHLETFRQWFEPLSISVGWLAGKQKGKIRLIQQEAVAKGQVSMVVGTHAIFQQQVRF SKLALVIIDEQHRFGVHQRLALWEKGKQQGFHPHQLIMTATPIPRTLAMTAYADLDIS IIDELPPGRTPISTVAIPDTRRDDVIQRIKHACLEEGRQVYWVCTLIEESELLEAQAA AVTYAELQATLVDVKLGLIHGRMTAQEKQAVMQVFKQGELQLLIATTVIEVGVDVPNA SLMIIDNPERLGLAQLHQLRGRVGRGSTASHCVLLYKTPLTKTVQMRLQVLRESNDGF VIAQRDLEIRGPGELLGTRQTGGTEFKIADLLRDQNILPEVQRIARHLHQKYPEQAAA LIERWLPEKRRYTNA" gene complement(233359..234561) /gene="gltS" /locus_tag="REG_0256" CDS complement(233359..234561) /gene="gltS" /locus_tag="REG_0256" /note="COG0786; similar to AA sequence EcoGene EG10406; similar to AA sequence GI 22124026" /codon_start=1 /transl_table=11 /product="Na+/glutamate symporter" /protein_id="EFL92474.1" /translation="MFHLDIYGTLVSATLVLLLGRKLVKSVPLLQRYTIPEPVAGGLL IALLLLMIQQVWGWEIRFDMSLKDPLMLTFFATIGLNANLASLRHGGSSLIYFIFIVI GLLFMQNAIGIALAKMMGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFENAPEV AMACATFGLILGGLVGGPVARYLVKNSSTPEGSPDDSQLPSAFEKPYTGRLITPLVML ETIAMIAICLTAGNFIADLLKQSAFELPTFVCVLFVGVILSNSLAVLGFYKVFDRAVS VLGNVSLSLFLAMALMSLKLWELVSLALPMLTILIVQTLAMALYAIFVTYRVMGKNYD AAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHLAFLVVPMVGAFFIDIANALVIKL YLLLPLFP" gene complement(234631..235970) /gene="envZ" /locus_tag="REG_0257" /note="Signal transduction histidine kinase; similar to COG0642; similar to GI 77975054; EcoGene EG10269" /pseudo gene complement(235925..236644) /gene="ompR" /locus_tag="REG_0258" CDS complement(235925..236644) /gene="ompR" /locus_tag="REG_0258" /note="COG0745; similar to AA sequence EcoGene EG10672; similar to AA sequence GI 22127786" /codon_start=1 /transl_table=11 /product="Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /protein_id="EFL92475.1" /translation="MQENHKILVVDDDVRLRALLDRYLTEQGFQVRSVANAEQMDRLL ARESFHLLVLDLMLPGEDGLSICRRLHNQNNPIPIIIVTAKSEDVDRVVGLEIGADDY MSKPFNPRELLARIRAVLRRQMNELPGAPSQEEAIISFGQFKLNLGTREMFRDDDLMS LTSGEFAVLKALVSHPRDPLSRDKLMNLARGREYSAMERSIDVQISRLRRMIEVEPAR PRYLQTVWGLGYVFVPDGNSV" gene 237054..239237 /locus_tag="REG_0259" /note="Transcriptional accessory protein, S1 RNA binding domain; similar to COG2183; similar to GI 77962670; EcoGene EG12932" /pseudo gene complement(239503..240006) /gene="sspB" /locus_tag="REG_0260" CDS complement(239503..240006) /gene="sspB" /locus_tag="REG_0260" /inference="protein motif:PFAM:PF04386" /note="COG2969; similar to AA sequence EcoGene EG10978; similar to AA sequence GI 123443921" /codon_start=1 /transl_table=11 /product="Stringent starvation protein B" /protein_id="EFL92476.1" /db_xref="PFAM:PF04386" /translation="METPEISPRRPYLLRAFYDELINSQLTPYLLVDSTDPNVTLPSE QGCDGRIVLNLSPYAVENLQLGNHEVSFNASFNYIPYHVIVPMKAVLAIYAKENGEGM VFEKEAAYDVESKTISDNEDPVTTSSNLTLVANKDEGQQDDKSPPDDDNPRPPPRGNR PTLRIVK" gene complement(240012..240683) /gene="sspA" /locus_tag="REG_0261" CDS complement(240012..240683) /gene="sspA" /locus_tag="REG_0261" /note="COG0625; similar to AA sequence EcoGene EG10977; similar to AA sequence GI 50119268" /codon_start=1 /transl_table=11 /product="stringent starvation protein A" /protein_id="EFL92477.1" /translation="MEVFMAIAASKRSVMTLFSCSTDMLSHQVRIVLAEKGVSVEIES INPENPPQELKELGTPCSVPTLIDRDLTLYLPHVITEYLDERFPHPPLMPVYPVARAQ SRLMMHHIENNWYSLLKKIKEGNEQEADTTRKNLRAQLLEGTSLIKPNGYFMGDDFSL VDCQLAPLLWRLAELKIVLNGEDAKQIRGYMGRVFQRDGFLASLSEAERDMYPTENKI HTVVG" gene complement(240934..241209) /locus_tag="REG_0262" CDS complement(240934..241209) /locus_tag="REG_0262" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92478.1" /translation="MAKPGCIPFVFEVAARRGQGDRPMSVDILGDSMSTRSQQRGGFK DEGYISGFFLFLIKFLAPVPNFLEQHSIDEVLANIRDSEQALTKHTM" gene complement(241392..241790) /gene="rpsI" /locus_tag="REG_0263" CDS complement(241392..241790) /gene="rpsI" /locus_tag="REG_0263" /inference="protein motif:PFAM:PF00380" /note="COG0103; similar to AA sequence EcoGene EG10908; similar to AA sequence GI 156935746" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S9" /protein_id="EFL92479.1" /db_xref="PFAM:PF00380" /translation="MAMAENQYYGTGRRKSSAARVFIKPGCGKILINQRSLEEYFGRE TARMVVLQPLKLLDMTERFDLYITVKGGGISGQAGAIRHGMTRALMQYDESLRPNLRK AGFVTRDSRKVERKKVGLRKARRRPQFSKR" gene complement(241802..242245) /gene="rplM" /locus_tag="REG_0264" CDS complement(241802..242245) /gene="rplM" /locus_tag="REG_0264" /inference="protein motif:PFAM:PF00572" /note="COG0102; similar to AA sequence EcoGene EG10874; similar to AA sequence GI 21956801" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L13" /protein_id="EFL92480.1" /db_xref="PFAM:PF00572" /translation="MGKRLMKTFTATPESIKRDWYVVDASGKTLGRLATELAHRLRGK HKAEYTPHIDTGDYIIVLNAEKIAVTGKKRTDKIYYRYTGYIGGLKQTTFEEMIARHP ERVIENAVKGMLPKGPLGRAMYRKLKVYAGNEHNHVAQQPQVLDI" gene complement(242322..242459) /locus_tag="REG_0265" CDS complement(242322..242459) /locus_tag="REG_0265" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92481.1" /translation="MPLGGQGVRPMSVDILRDSANTRSQQRGGFKGEGYIKCWQGYSK G" gene complement(242540..242668) /locus_tag="REG_0266" CDS complement(242540..242668) /locus_tag="REG_0266" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92482.1" /translation="MQLGGQGVRPMSVDRLSDSANTRSQQHGGFKGEGYIKKQFDL" gene complement(242749..243900) /gene="yhcM" /locus_tag="REG_0267" CDS complement(242749..243900) /gene="yhcM" /locus_tag="REG_0267" /inference="protein motif:PFAM:PF03969" /note="COG1485; similar to AA sequence EcoGene EG12819; similar to AA sequence GI 22124055" /codon_start=1 /transl_table=11 /product="AFG1-like ATPase domain-containing hypothetical protein" /protein_id="EFL92483.1" /db_xref="PFAM:PF03969" /translation="MRKIQPNTFTSLYQRALNENGFQADDAQRTAVSRLEEVYQEMSQ PRSLPQESITLCQYWRQFLGKKKPMLPTNPVKGLYMWGGVGRGKTWLLDLFFQALPSE RKLRLHFHHFMLRVHQELAELQGNENPLEIVADRFKIQTDVLCFDEFFVSDITDAMLL ATTLEALFTRGITLVATSNIPPDDLYHNGLQRARFLPAISLIKQYCDVIKIDAGIDYR LSTLTQTGLYLTPLNQQTENTITQMFVKLAGTEGEIAPVLKINCRALVTIRVAKEILA VDFHVLCEQARSHLDYIVLAKQYNTVLLHNVRSMGIDYSSGADESTARRFLALIDEFY ERKVKLIISAQVPMAELYQGEQLKFEYQRCLSRLQEMQSKTYLQLLHLP" gene 244115..244474 /gene="yhcB" /locus_tag="REG_0268" CDS 244115..244474 /gene="yhcB" /locus_tag="REG_0268" /note="COG3105; similar to AA sequence EcoGene EG12614; similar to AA sequence GI 77957465" /codon_start=1 /transl_table=11 /product="cytochrome d ubiquinol oxidase subunit III" /protein_id="EFL92484.1" /translation="MAWEYGLIGLIVGMLIGALAMRFGNRDLRQQQKLKNELDRKSID FEEYRQELVGHFVRNAELLDNMARDYRQLYQHIAKNSNNLLPDLPLQDNSLHSHNRNN ESDGDKPQVKVAPLDYF" gene 244648..245166 /gene="slyD" /locus_tag="REG_0269" CDS 244648..245166 /gene="slyD" /locus_tag="REG_0269" /note="COG1047; similar to AA sequence EcoGene EG11663; similar to AA sequence GI 82778630" /codon_start=1 /transl_table=11 /product="FKBP-type peptidyl-prolyl cis-trans isomerases 2" /protein_id="EFL92485.1" /translation="MMKVAKHRVVSLVYQVRTEENRLLEEYDLDSPLQYLHGHDTFIP ALEKALESREVGERFELHLDADDAYGCCRDENLIQRVEKALFVDDDPTLEVGMCFLVD TDQGQMPVTITAVEDQHVVIDGNHLLSGQNLHFNIEVVAIRQATEQELQHSDVHCDHH HHHQQTDNCCVH" mobile_element complement(245216..246134) /mobile_element_type="insertion sequence:ISRin1" gene complement(245242..245619) /locus_tag="REG_0270" CDS complement(245242..245619) /locus_tag="REG_0270" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92486.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(245628..246065) /locus_tag="REG_0271" CDS complement(245628..246065) /locus_tag="REG_0271" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92487.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene complement(246249..247853) /gene="gshA" /locus_tag="REG_0272" CDS complement(246249..247853) /gene="gshA" /locus_tag="REG_0272" /inference="protein motif:PFAM:PF04262" /note="COG2918; similar to AA sequence EcoGene EG10418; similar to AA sequence GI 77956707" /codon_start=1 /transl_table=11 /product="gamma-glutamylcysteine synthetase" /protein_id="EFL92488.1" /db_xref="PFAM:PF04262" /translation="MLTHYCFSEREVNLIPDVSQMLSWLEANPNVLQGIRRGIERETL RITADGGLAMTDHPKSLGAALTHQWITTDFAEAMLEFITPVNTSIDHLLDFLRDLHRY STRQLGEETLWPLSMPSDLQTQHNIEPAKYGASNLGRFKNIYRAGLKNRYGALMQIIS GVHYNFSLPTAFWQHRTDYIDEKNSNAEISAGYFRLIRNYHRFGWLIPYLFGASPAIC SSFLNDKKTSLVFERKNGSCYLPYATSLRLSDLGYSNKSQHNLAISFNDLTSYVDSIK WAVCLPSKEFSALGLKKGEDYLQLNTNLLQTENELYAPIRPKRVSKAGEAPSDALLRG GVEYIEVRSLDINPFSPIGIDATQVRFLDLFLIWCALADAPTMNNNQLVYTGKNWQRV ILAGRKPGQTLFVGWDSDTKEAPLSEIGKALFNDLRRIASLFDHKQRQEYQQVCDELV SYFDDPTLTFSARVLQEIQQKGINEFALSLAERHRHTLKNESFRVMSEKQLSDEREAS WQRQYELERTDTLSFAQYLSLHGGGR" gene 248149..248877 /locus_tag="REG_0273" CDS 248149..248877 /locus_tag="REG_0273" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92489.1" /translation="MPGSSSIALNSSFIAEVSPPVTDSKSGNSFSFCDQLVGTSNVSV CCEFVSTLYEECKETSRRLAEYYLTTKMVQSLLAGELGYHSVMAVIPDSIAQLGARFH IACLIKGALFTFATDAFGHGIDKVKNATLFSSLEEYLSKPSLYEEFRETSRRLAEHYL TTKMVQSLLAGELGYHAVMAVIPNWLAQLGARFHIACLIKGAFFTFATDAFNHGIDKV KNTALFSNLEEYLSKPLSEKKDEL" gene 249024..249977 /gene="coaA" /locus_tag="REG_0274" CDS 249024..249977 /gene="coaA" /locus_tag="REG_0274" /note="COG1072; similar to AA sequence EcoGene EG10922; similar to AA sequence GI 77971981" /codon_start=1 /transl_table=11 /product="panthothenate kinase" /protein_id="EFL92490.1" /translation="MKKKHRPLSTPYLAFNRLQWAALRDCVPMTLTEEEIVKLKGINE SLSVEEVAQIYLPLSRLLNFYISSDLRRQTILKQFLGNNNRQNIPYVIGIAGSVAVGK STTARLLQALLSRWPEHRQVELITTDSFLYPNRVLEERGLMKKKGFPESYDMRSLVNF IAEIKSGASQVCAPVYSHLKYDIVPNEKKIIEQPDILILEGLNVLQSSMDYLHDPRHV FVSDFVDFSIYVDAAENLLQEWYIDRFLKFRAGAFSNPDSYFSHYAQLPETEACITAS QLWNEINGLNLKQNILPTRERASLIMTKSANHAVQSVRLRK" gene complement(250007..250975) /gene="birA" /locus_tag="REG_0275" CDS complement(250007..250975) /gene="birA" /locus_tag="REG_0275" /note="COG0340; similar to AA sequence EcoGene EG10123; similar to AA sequence GI 77976219" /codon_start=1 /transl_table=11 /product="biotin-(acetyl-CoA carboxylase) ligase" /protein_id="EFL92491.1" /translation="MKKSKVPLRLINILADGMFHSGEQLGEIMGISRTAINKHIRTIK SWGLDVFSLSGRGYCLTCPLQLLDEKKIRSYMPSDSGNIEVLSVIDSTNQYLLERMNE LQSGDACVAEHQYSGRGRRGRQWVSPFGSNIYFSMFWRLEQGPESVTGLSLVIGTAIA EVLKQMGVEDIRVKWPNDLYLHGKKLAGILVELTGKMGDAVQLVMGVGINILMPITAQ KESINQDWTTLQEAGITIDRNKLTAEVFAALKRDMTQFEKEGLTAFIDRWRQLDNYCG CPVKLIVGKKEIRGIARGIDSQGALLLEQNGTVKAYSGGEISLRGG" gene complement(250972..252009) /gene="murB" /locus_tag="REG_0276" CDS complement(250972..252009) /gene="murB" /locus_tag="REG_0276" /inference="protein motif:PFAM:PF01565" /note="COG0812; similar to AA sequence EcoGene EG11205; similar to AA sequence GI 77956143" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate dehydrogenase" /protein_id="EFL92492.1" /db_xref="PFAM:PF01565" /translation="MLNQGTSLKNLNTFALSMYATKVLYADSISTLTNAWHEAKKAHQ PVLLLGAGSNVLFVEDFSGTVLLNRIKGISHTDDSTTWYLHVGAGENWHQLVCYSLQN NMAGLENLALIPGCVGAAPIQNIGAYGVELENVCEYVDVLDLNTGINQRITAKDCRFG YRDSIFKHRYREGFAVVAVGIKLAKVWRPILNYGELNRLDPLTVTAKEIFNLVCTLRR NNLPDPTVNGNAGSFFKNPLVSKKRAIQLLKHYPNMPYYQQSDNSVKLAAGWLIDQCS LKGHRIGGAAVHQQQALVLINIDCAVAQDILALANYVRKQVASKFAVWLEPEVRYIAA NGEINPKEYFS" gene 252754..253434 /gene="yqjA" /locus_tag="REG_0277" CDS 252754..253434 /gene="yqjA" /locus_tag="REG_0277" /inference="protein motif:PFAM:PF09335" /note="COG0586; similar to AA sequence EcoGene EG12740; similar to AA sequence GI 77972159" /codon_start=1 /transl_table=11 /product="SNARE associated Golgi domain-containing hypothetical protein" /protein_id="EFL92493.1" /db_xref="PFAM:PF09335" /translation="MDIMLKIIDALWQQDYETLANPSLVWAIYILLFVIIFLENGLLP AAFLPGDSLLLLVGVLISKEAMNFSITLIVLTTAASLGCWLSYLQGRWLGNTKIVQKW LAYLPAHYHQRSHQLFHRHGLSALLVGRFLAFIRTLLPTIAGITGLNNARFQFFNWMS GLLWVLILTSLGFFLGRTPVFIRYEDELMFVLILLPLALLVIGLFGSIYFLWRKKYVN PVKEDNQS" gene 253431..253727 /locus_tag="REG_0278" CDS 253431..253727 /locus_tag="REG_0278" /note="similar to AA sequence EcoGene EG12741" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92494.1" /translation="MIHRKIGFRLATRQHWWLTAPALAALVVFFIFIMLPTKNTLQII ANKPGFKIPDGFAVYQYLDEQKIRIKSITYENDALVISFESPPSVSLVVASNFR" mobile_element 253687..254538 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene 253756..254498 /locus_tag="REG_0279" /note="ISRin3 putative transposase, pseudogene; similar to COG2801; similar to GI 51596214" /pseudo gene complement(254533..255084) /locus_tag="REG_0280" CDS complement(254533..255084) /locus_tag="REG_0280" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92495.1" /translation="MQQIEISNEGEYLLKAGNHVLMLSSRYQGRQHRYALYDSYVGEI SVTGSDATKNGDTLNATLQTYLAEPYHPQSSQTRGEYYGMLFQEGQYGFEATYQVNIA EARKYYPTLEVFQASLKDFKSERQRLAEASNITLNGATLPARTLSRMGATLAGKPVSA KQLADATLISTLQFNPEQLCRYR" gene complement(255364..256641) /locus_tag="REG_0281" CDS complement(255364..256641) /locus_tag="REG_0281" /note="COG2931; similar to AA sequence GI 211638882" /codon_start=1 /transl_table=11 /product="putative RTX-family protein" /protein_id="EFL92496.1" /translation="MCRCYVYTQFVTKSEELIFSEMTREDTKQTIRYATNLLDDRVTS PPISQSNKLAVSGANYSANTRFDSQLILQLEDDLAVVIAAEKLTSKHPDRSVQFKFDS EGRLHLVYGNVLSGQLRWQVVGHGSGGENEINHQTLGGYSPTKLAEKIKQLSTILYST YQVNSTPHYVSLVGCSLTDYDLQTGGYAYQFGIALDKQGIRADIAARRTQMAVNELGH KITLSDDGFLYHKISEDKLVLTWNIQGQLVSASDLTMRLVRAITLVDQLSSGEVKYSA LDVQQRRDLADSFHRAEGILDVEKLILTAFEHRYYQAWRNDMHQLLQLQDSYAQLRGM TGQTARQYSNYWSACQSNSIVSWRRAGMENRTQGVEIDIRIAPQGLFIGDSSTYAFVT ATGMGTGRYSTLYFLSSIRSIFKHFADEIFSYV" gene complement(256590..257375) /gene="znuB" /locus_tag="REG_0282" CDS complement(256590..257375) /gene="znuB" /locus_tag="REG_0282" /inference="protein motif:PFAM:PF00950" /note="COG1108; similar to AA sequence EcoGene EG12368; similar to AA sequence GI 77979742" /codon_start=1 /transl_table=11 /product="membrane component of Zn2+ ABC transporter" /protein_id="EFL92497.1" /db_xref="PFAM:PF00950" /translation="MIELLLPGWLAGMLLATLAGPLGSFIVWRRMSYFGDTLAHASLL GVACGLLLHIDPFYTVIAITLMLALILVLMERKPQLAVDTLLGILAHSALSLGLVVVS LMHNVRVDLMAYLFGDLLSVRLSDIWLIASGAALVLLILCWQWRPFLLMTISPELAHV DGVNLQRSRMLLMLITAITIGLSMKFVGALIITSLLIIPAAAARRFARTPEQMAGIAV VIGMLAVSGGLILSACYDTPAGPSVVLCAAVMFILSLSRKARS" gene complement(257379..258104) /gene="znuC" /locus_tag="REG_0283" CDS complement(257379..258104) /gene="znuC" /locus_tag="REG_0283" /note="COG1121; similar to AA sequence EcoGene EG13132; similar to AA sequence GI 108807439" /codon_start=1 /transl_table=11 /product="ATPase component of Zn2+ ABC transporter" /protein_id="EFL92498.1" /translation="MIIMSTLIMLNSISVTLGERRVLNDISLCLQPRQLLTLLGPNGA GKSTLVRVVLGLLAPTSGTLIRKPALRIGYVPQKLYLEASLPLTVNRFMGLQAKSQSA DILSALNRVQALHLLESPMQKLSGGESQRVLLARALLNKPQLLVLDEPTQGVDINGQL ALYDLIEQLRMELGCALLMVSHDLHLVMAKTDEVLCLNQHICCSGTPEAVSMHPEFIA MFGKSGAEQLAIYRHNHRYEVER" gene 258107..259111 /gene="znuA" /locus_tag="REG_0284" CDS 258107..259111 /gene="znuA" /locus_tag="REG_0284" /note="COG4531; similar to AA sequence EcoGene EG12678; similar to AA sequence GI 77973533" /codon_start=1 /transl_table=11 /product="periplasmic component/surface adhesin of Zn2+ ABC transporter" /protein_id="EFL92499.1" /translation="MQNQFNVIILHLIDSHDEKIYFMFKKKRWRQYAALTVVCLTFNT FNLAFATVVTSIRPLGFIAAAITEGVTPTKVLLPNGASPHDYALRPSDLTLLRDADLV IWIGPDMEIFLSKPLTRFATNKQIAIAQLPKVEALLIRDTEHDHPVSEQVTTEKDDHH HHHGDYNMHLWLSPSIAKLAAIAIHDKLLELMPQNRDKLDENLRQFKDQLAQREEKIA KMLKPIQNKGYFVFHDAYGYFEERFGLTPLGHFTFNPAIQPGVQRLDQIKTQLLDKKA TCIFAEPQFRPAVINAIAEGTDVHIGMLDPLGGSIELHKDSYVEFLSQLSDQYLSCLK " gene 259349..260668 /locus_tag="REG_0285" CDS 259349..260668 /locus_tag="REG_0285" /inference="protein motif:PFAM:PF01551" /note="COG0739; similar to AA sequence EcoGene EG10013; similar to AA sequence GI 22126134" /codon_start=1 /transl_table=11 /product="putative M23 peptidase family protein" /protein_id="EFL92500.1" /db_xref="PFAM:PF01551" /translation="MQQVVRTITLTYNSLSRPHRIMLGSLILVTLAVFIWQPAVHLPE NDPISKDITLNLTQPRSLPLDVNEPLEQTIPEPDEILQDELDTKSPNGSSTNEYVISS GDTLGNILTQYGIDKADIALLASQHRALRHLKVGQQISWSINANGDLQRLLWEVSARE SRIYDRIGNHFKEKKILQQGEWHDSVLKGRFGGNFIKSAKNAGLNTTEIRAVTKALQW QLNVNKLQSGDQFSVLMSREKFEGRHEQSRLLGVHILSNGKDYYAIRASDGKFYDRHG SGLARGFMRFPTMRHFRISSGFNLRRVNPVSGRITPHKGVDFAMPIGTPVLSIGDGEV LIAKRSGAAGNYVVIRHGRQYITRYMHLKKLLVEPGQKVKRGDRIALSGNTGRSTGPH LHYELWINQQAVNPVTAKLPRSEGLTGQSRRKYMATAKQVVSQLRFN" gene 260684..261646 /gene="lpxM" /locus_tag="REG_0286" CDS 260684..261646 /gene="lpxM" /locus_tag="REG_0286" /inference="protein motif:PFAM:PF03279" /note="COG1560; similar to AA sequence EcoGene EG10614; similar to AA sequence GI 77959253" /codon_start=1 /transl_table=11 /product="Lauroyl/myristoyl acyltransferase" /protein_id="EFL92501.1" /db_xref="PFAM:PF03279" /translation="MHQEKNKNEGFIPRFQKSFLYPRYWLIWFSIMLLIVSAYIPARI RDPFWASLGRLVGKFAKGARRRARINLCYCMPQLDEKKREKLIDDMFAAAAQPMVMLA ELYLRGTKSLCSRVHWHGREIWDDVQKQERNIILLVPHGWMIDIPFMLLAAEGKPVAG MFHHQRNSLIDYLWNRTRLRFGGRIHSREEGIKPFISSVRQGFWGGYLPDEDYGTDQS EFVDFFATYKATLPTLGRLMKICNAAIVPMFSVYDYNKHRFDIYIRPPMDDLTGADDA YVARRVNEEIETLITPNPEHYAWILKFIKTRKHGEIQPYLRKDL" gene 261773..263242 /gene="zwf" /locus_tag="REG_0287" CDS 261773..263242 /gene="zwf" /locus_tag="REG_0287" /inference="protein motif:PFAM:PF00479" /note="COG0364; similar to AA sequence EcoGene EG11221; similar to AA sequence GI 123442625" /codon_start=1 /transl_table=11 /product="Glucose-6-phosphate 1-dehydrogenase" /protein_id="EFL92502.1" /db_xref="PFAM:PF00479" /translation="MAASDPTPACDLVIFGARGDLARRKLLPSLYQLEKAGHLHPDTR IIGMARADWNKEQYSKQVKESLNKFIKEKLDNLLWSKLQARLNFCKLDVEDNEHFKKL KELLDQKDHPAIHYFAMPPSTFGSICKGLAQAKLNSPPNRVVMEKPLGKDFASSQVIN NQVAKYFNESQVYRIDHYLGKETVLNLLALRFANNLFISNWDNRTIDHIQITVAEEVG IEGRWGYFDEAGQMRDMVQSHLLQILTMIAMAPPAKLNADDIRDEKVKILRSLRRIDH RNVRNTTVRGQYIAGKLQGHQVPGYLEEDGANKNSITETFVSIRLDIDDWRWAGVPFY LRTGKRLTTKCSEVVVYFKNQVLNLFTGSYLELPQNKLTIRLQPDEGIEIQILNKVPG LEHKHRLQTTKLDLSFSETFHQEHLADAYERLLLEVMRGIQALFVRRDEVEEAWKWVD SIMAAWKTENQAPEPYESGSWGPKASADMLTNDSRSWNE" gene 263478..265424 /gene="yoaA" /locus_tag="REG_0288" CDS 263478..265424 /gene="yoaA" /locus_tag="REG_0288" /inference="protein motif:PFAM:PF00270" /note="COG1199; similar to AA sequence EcoGene EG13513; similar to AA sequence GI 77977711" /codon_start=1 /transl_table=11 /product="DEAD/DEAH box helicase domain-containing hypothetical protein" /protein_id="EFL92503.1" /db_xref="PFAM:PF00270" /translation="MTNDFAIEGVLARAITGFNPRESQQKMAQAVREAIKAKQQLVVE AGTGTGKTFAYLVPALRAKCKIIISTGSKALQDQLYGRDLPTIVQAIDFKGQLALLKG RSNYLCLERLAQQLLVGNQQTDNILKEFTYLRRWSSTTEDGDINTCVKIAEDSLIWPL VTSTHDNCLGADCPKYQDCFVVKARRRAMDADIVVVNHHLFMADRVVKESGFAELIPY ADAVIFDEAHQIPDIASQYFGQQLTSRQLMNLAKDIIVIYRTELQDTSQLQTSADQLI KCIQDLRLAFGSLTPQSHFLGNFRGDLADLLQKNLRRTAPLQQALVLLKEALEFCHDT VKSSLGRSATLDTLYERVMMYLNRFKRLKEVTIPGFSYWYECNPRHFILALTPLSIAE RFHELMIEKPSSWIFTSATLSVNEGFEHFTQRLGLTESKTLLLPSPFDYANQALLCVP RHLPSPNQFDVAQKLADMLKPVIEANHGRCFFLCTSNQMMRELAEAFRASMTLPVLVQ GETSKEALLNQFITAGNALLVATNSFWEGVDVRGNTLSCVIIDKLPFTTPDDPLLKAR MEDCRLRGGNPFNDVQLPDAIIMLKQGVGRLIRDISDRGLLVICDHRLVTRPYGATFL NSLPPTPRTRDLITAIEFVKPQRL" gene complement(265891..266523) /gene="pilT_2" /locus_tag="REG_0289" /note="pilus retraction ATPase PilT; interrupted by IS element; similar to COG2805; similar to GI 77956179" /pseudo mobile_element 266532..267451 /mobile_element_type="insertion sequence:ISRin1" gene 266602..267039 /locus_tag="REG_0290" CDS 266602..267039 /locus_tag="REG_0290" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92504.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 267048..267425 /locus_tag="REG_0291" CDS 267048..267425 /locus_tag="REG_0291" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92505.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(267418..267795) /gene="pilT_1" /locus_tag="REG_0292" /note="pilus retraction ATPase PilT; interrupted by IS element; similar to COG2805; similar to GI 211639084; EcoGene EG12978" /pseudo gene 268164..268856 /locus_tag="REG_0293" CDS 268164..268856 /locus_tag="REG_0293" /inference="protein motif:PFAM:PF01168" /note="COG0325; similar to AA sequence EcoGene EG12979; similar to AA sequence GI 51597523" /codon_start=1 /transl_table=11 /product="alanine racemase N-terminal domain-containing hypothetical protein" /protein_id="EFL92506.1" /db_xref="PFAM:PF01168" /translation="MITIQQNIHDVKKQIASAAEHCGRSPKEVSLLAVSKTQSVSAIK KAINAGQYAFGENYVQEAIDKIAYFAHHSKLEWHFIGLLQSNKSRLVAEYFTWCHTVD SLKIAQRLSHQRPGNMPALNILIQINISGEKSKSGISLNELPQLAENIYTLPNLQLRG LMAIPAADNDYPRQLAIFQQMHQAFLLLKENYPQVDTLSLGMTHDMTAAIHAGSTLVR IGTAIFGSRGKT" gene 268879..269700 /gene="proC" /locus_tag="REG_0294" CDS 268879..269700 /gene="proC" /locus_tag="REG_0294" /note="COG0345; similar to AA sequence EcoGene EG10769; similar to AA sequence GI 77956394" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /protein_id="EFL92507.1" /translation="MEHRSIAFIGAGNMARAIIAGLCHQGYPGEKISVYAPSGQNRDT LAREFGVISSADNIVSAQQAEVIVLAVKPQIMATVCESLKEKIDFSKKLVLSITAGIS IARFYALLGDKLNIIRIMPNLPVSVGKGMCGLFAPKNTDQSDLNFAEDFMRSVGEVCW LNAESDINTVIAAAGSSPAYFFLLMDAMQQEAIKQGFDAEKARLLIQQAASGAAALVE AKPQCSLSELCHQVTSKGGTTAAALKIFEENNMANIVSQAMQAAITRAEEMEKSF" gene 269915..270469 /locus_tag="REG_0295" CDS 269915..270469 /locus_tag="REG_0295" /note="COG0762; similar to AA sequence EcoGene EG12980; similar to AA sequence GI 77961501" /codon_start=1 /transl_table=11 /product="YGGT domain-containing hypothetical protein" /protein_id="EFL92508.1" /translation="MLTLIFLTKTVIDLYVMLLLLRIWMRWVNSDFYNPFTQSVAKLT QPIIGSLGRILPSLGPIESASLFFAFLLMTIKYPLLLLIQGGGLVLSPYNLLFGVISL LKAAGYLIFWVMIIRALMSWISQGSSPMDYLLYQLSDPLITKIRRVVPSMGGIDFSPM IVILLLYLINYLGMDLLGELWFVL" gene 270725..270967 /locus_tag="REG_0296" CDS 270725..270967 /locus_tag="REG_0296" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92509.1" /translation="MRKIKTLLKLLAIFLLSPPAFAYSLDEHKMCELLLMPIKSCAQS APPAQQKIAAKIESPFSSQKEAEEFNATMQRIWPWW" gene 271196..271960 /locus_tag="REG_0297" CDS 271196..271960 /locus_tag="REG_0297" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92510.1" /translation="MPNDLLLSGDWPTIIQTTDTTENDPAFINPVCSNLIDVYSSSEK PNFGYFDEEEKEEEDLKLGCVNPNDILSIASVKTIQYSDPTSTHPPPVSQQSSSVNIL TNHKAKVDINPKPKLKKILADPNDKITADFKDTVKETDQDILIKALIWFRKRREVLRG PYPEKCHYIACYMMSDNGFAMREGKLGALTGIKQSTLKGWPTQLKIPISFWAELKRAA NENTETESHKRQKLNTLPLTAEAEIESPTKQNKDNL" gene 272149..272745 /gene="rdgB" /locus_tag="REG_0298" CDS 272149..272745 /gene="rdgB" /locus_tag="REG_0298" /note="COG0127; similar to AA sequence EcoGene EG12982; similar to AA sequence GI 123443631" /codon_start=1 /transl_table=11 /product="dITP/XTP pyrophosphatase" /protein_id="EFL92511.1" /translation="MMKKIVLATSNPGKVRELASLLAAWDLNVVAQNELGVTSVEETG LTFVENAILKARHAAQMTGLPAIADDSGLVVDALGGAPGLYSARYAGCNATDQQNVAK LLAEMAEVPDQQRGAAYHCVLVYFHCATDPTPLVFHGSWRGKITDKPIGQDGFGYDPI FYLPALKRTAAQLSTVEKQKISHRGQALKLLLDALKNA" gene 272738..273868 /gene="hemN" /locus_tag="REG_0299" CDS 272738..273868 /gene="hemN" /locus_tag="REG_0299" /inference="protein motif:PFAM:PF04055" /note="COG0635; similar to AA sequence EcoGene EG12983; similar to AA sequence GI 77961504" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /protein_id="EFL92512.1" /db_xref="PFAM:PF04055" /translation="MLKLPPMSLYIHIPWCIQKCPYCDFNSHALKGDIPHQKYVEHLL ADLDADLPLIDGRKINSIFIGGGTPSLLSAEAMSQLLEGVNARLKLAEHAEITMEANP GAVEAERFRHYQQAGVNRISIGVQSFSASKLKKLGRVHGSDEAKQAAILANLLQFRSV NLDLMHGLPDQSHREALDDLHQAIALAPAHISWYQLTIEPNTAFSSRPHTLPDEDVLW AIFQQGQQILQSAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKITRSNG EILRTVKTKHPRGFMQGKYLDQQYNVVVADRPFEFFMNRFRLFEAAPRADFYHLTGLA ESSIRSPLDQALAKGYLLETKQHWQITEKGKLFLNSLLELFL" gene 274019..274432 /locus_tag="REG_0300" CDS 274019..274432 /locus_tag="REG_0300" /inference="protein motif:PFAM:PF01906" /note="COG0393; similar to AA sequence EcoGene EG13686; similar to AA sequence GI 50121590" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92513.1" /db_xref="PFAM:PF01906" /translation="MKGEGYRIQKYFCDAPRHNLKLLLFSDECPLMQLSTTPTLQGAT IAQYCGIVSSEAMLSVNIFHGFFANIRHLIGKRLCGYEVELHKARQIAFTKLQAQAEK LAADAVVGITIDYHVVGKNGSMLMLSLSGTAVKLG" gene complement(274432..275270) /locus_tag="REG_0301" /note="hypothetical protein; similar to COG4461; similar to GI 209906086" /pseudo gene complement(275732..276265) /locus_tag="REG_0302" CDS complement(275732..276265) /locus_tag="REG_0302" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92514.1" /translation="MRNTMKKKCALFASALCMLSSLWAVNLDAAEDEKGISKYTVALE INVSGPNFYIIPLDGRQDVQQIRYDPIRKKFLPLRIPYRFFNNSAGFSIGVKLKEEAK LTNEKMKGEIQLAVKISNALGDITTNTATTIRGTRAMKQSKVEDIIISVIEPSSLPPA GTYQGTVSLIFESTIDP" gene complement(276305..277106) /locus_tag="REG_0303" /note="hypothetical protein; similar to GI 188026454" /pseudo gene complement(277045..277197) /locus_tag="REG_0304" CDS complement(277045..277197) /locus_tag="REG_0304" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92515.1" /translation="MAHLSIKKICPVCQAATKIKYHRKDYPRKRRESSAFTQNIISLF DGSGHE" mobile_element 277247..278165 /mobile_element_type="insertion sequence:ISRin1" gene 277316..277753 /locus_tag="REG_0305" CDS 277316..277753 /locus_tag="REG_0305" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92516.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 277762..278139 /locus_tag="REG_0306" CDS 277762..278139 /locus_tag="REG_0306" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92517.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(278493..279863) /locus_tag="REG_0307" CDS complement(278493..279863) /locus_tag="REG_0307" /note="similar to AA sequence GI 183600654" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92518.1" /translation="MLWGLVSESRAQEIEIKAEFRPSLLNRGQDGFQNKTESTGICAK TDVNSRNFQEICKTQGLFSIALQGEAIQQEDIPERGDARKALYFKWPRKENILLQNQQ VGTEKKTANFTITNMSATYLERFTGLPSNNYNSHFNTNYTTEWWRAWENGDPENSTAP CKATYKGLGITVSGSYQPVMFMWDIPPDSGICYKKSRLIRPVAEPYDSSNSRHVYSGN PESREPAKIKDISFTYKLKLPDPLSMASGTYTNADTLTSFRIGNDEGVDIDFGNNFIW QGDPNVTLKFILEVAHDLKITPEFGAEKVILVPQDGSQRGWDRYLSGGSKPTKLTGRS KFRLSSSGEFTVYLQCGTPFSDTECALTSEDTKRTVPVRAFLTLASNIVVKDSSQKSV TRQPLRTKKDLPRNVFHTNNPAQNYPGHIDFEVSGEQSIKTLLAKAPDTYKDTVTVIF DANIHA" gene complement(279911..280687) /locus_tag="REG_0308" CDS complement(279911..280687) /locus_tag="REG_0308" /note="N terminal truncation; similar to AA sequence GI 183600653" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92519.1" /translation="MQDRKPYTNLNYNWRPEERGTIEYAGATVTANPDGLAFSGNAGL DNRWLNGDVYLQRGSKSENFYGGANLRNSLVLGGGSIATGQQLRSSQAAVIIDVESDQ PDIKLEVSGGEGSAPRLQPGKNIVGVSTWKQQRLQFHGQGEDGVRIYPEDYSLRMNRG SVNYLKLRAVKTQTVVGMLKDEQGNLLHNQEVASDVGKARINSEGVFTLEVSAAKPQI TVTGDDGKPRLVYSLPPSPEGERDEVRFVDVLTPSASPLS" mobile_element 280734..281676 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene 280803..281481 /locus_tag="REG_0309" /note="ISRin3 putative transposase, pseudogene; similar to COG2801; similar to GI 171322100" /pseudo mobile_element complement(281677..281859) /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene 281908..282186 /locus_tag="REG_0310" CDS 281908..282186 /locus_tag="REG_0310" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92520.1" /translation="MTFSITAVYQHNLSPAATMLNRGQAHDRVILRHPQAIQQSLQVK RKGILSIIENKHRRAVTTAIVHICILSSRRSPNNIDGDRSITFKAITE" mobile_element 282109..284163 /mobile_element_type="insertion sequence:ISRin6" gene 282254..282880 /locus_tag="REG_0311" CDS 282254..282880 /locus_tag="REG_0311" /note="COG4584; similar to AA sequence GI 183598505" /codon_start=1 /transl_table=11 /product="ISRin6, transposase orfA" /protein_id="EFL92521.1" /translation="MSSVGVFLPLSCRFIDEQITMSAFRISMRKLKEILRLKYRCQLS HRQIAKSLSVSPSVVSRYLNQAAQLGIRDYPLSPEWNELNLRAAFKQTPVKKKKSSLP DWSLICQELKHKIMTLQLLYEEYQQQNPANHYRYAHFAASTKAGSKCNPRRCDKPTKR EKSCSSIIVAPPSTSLTPKRVNSAQLRCLWRFSGRQITPMPKLPGVNA" gene 282942..284084 /locus_tag="REG_0312" CDS 282942..284084 /locus_tag="REG_0312" /inference="protein motif:PFAM:PF01695" /note="COG4584; similar to AA sequence GI 114562730" /codon_start=1 /transl_table=11 /product="ISRin6, transposase orfB" /protein_id="EFL92522.1" /db_xref="PFAM:PF01695" /translation="MPDNLKSGIDKACRYEPDLNPTYQQLAYHYDTVVVAARPYKPKD KAKVEVAVQIVERWIMAKLRRETFYSLKALNQRIQELLIELNNKPMKKRPGSRLSQFQ QIDKPVLKPLPRLPYRYTQVTQVRVQMDYHVEVDKHYYSVPHTLLKQKLEAHVSGELV NLFHRGELVAVHPRSHDVGGHSTLENHMPEAHKQQGRWTASRVDYSASRQLDKATIRS LTQGEWLKHHQNILITGATGCGKTWLACALGHHYCQQGMSVFYFRLKQLLAQMYLAQA QGSYRKLLDTLANCSLLLLDDWGLEPLNSQQRGDLLELIDARYDRTSTLITSQLPVAN WYQMIGESTHADAILDRLLHNAIKLELKGESMRKSMNKLTQGDHSG" gene complement(284132..284350) /locus_tag="REG_0313" /note="ISRin2, transposase orfB, pseudogene" /pseudo mobile_element complement(284164..284783) /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene complement(284365..284718) /locus_tag="REG_0314" CDS complement(284365..284718) /locus_tag="REG_0314" /note="similar to AA sequence GI 30249526" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfA" /protein_id="EFL92523.1" /translation="MTYPLKFRQHVLAFKKKEALTYAETADRFGVGSASLMRWAKRLE PCLTRNKPATKINRAALILDVETYPDASQHERAQRMGVSARGICDALKRAGFSYKKNI LSPQSRRPSSKRFSD" gene complement(284828..286501) /locus_tag="REG_0315" CDS complement(284828..286501) /locus_tag="REG_0315" /inference="protein motif:PFAM:PF00413" /note="similar to AA sequence GI 167464170" /codon_start=1 /transl_table=11 /product="Matrixin domain-containing hypothetical protein" /protein_id="EFL92524.1" /db_xref="PFAM:PF00413" /translation="MNTMEEPDRVSDVGLTTSTEQKQTIPQSVVDEALATQLIHYLIA AQVISGLQPDKLVDKEKELTFRYLTPRYHDVVIRQNKQPSVSGLTTFTALQREINQSV LNEIAEKTGLEFRQVEGDEPADLVFGNFHSPTISLVGFVDSTTTVPSKRDEIWVNTKL KARRNPERFKATLVHEIGHALGLDHSFNLEDPCTIMSYSWSSTGLQVADFLALWTLHG RDSHPQSEERIKAGEQARAQMWLRIKKDMPPKNYWKKFLLRAGDRWCAFVSVDKTHSM LRVDVFRKGAQAEGYFRDKTYAEIRMRNHTGKVIFEKEIKGTGMLSSREEIPFTEGYQ LEIYHAEAETRLFSNPNIQREPVPDAKTNRFIMTKTGLKRLIPTHQMTLLDRNNYAFA SLSVDSVARQLEIDISRPPADEDAQDSVYTSIKVINKKGRVVFKKEIKGSDTGMLRTR ILFSEGDKLEIYHAQAEERLKILSSGVKADFAVDAKTMTFIMTSRGLEKCLFSPQPTQ GDTADKMAQAMSGFTPPLLDAVSCQQDNRLTPSEFFSALVSAGSYTLRL" gene 286888..287418 /gene="ruvC" /locus_tag="REG_0316" CDS 286888..287418 /gene="ruvC" /locus_tag="REG_0316" /note="COG0817; similar to AA sequence EcoGene EG10925; similar to AA sequence GI 157371018" /codon_start=1 /transl_table=11 /product="endonuclease subunit of Holliday junction resolvasome" /protein_id="EFL92525.1" /translation="MIIIGIDPGSRITGYGVIALKGRQLSYLASGCIRTGGGPLPTRL KLIYAGVSEIITQFQPDFFAIEQVFMAKNADSALKLGQARGVAIVAAVNQHLTVFEYA ARLVKQSVVGSGAAEKKQVQHMVRCLLNLSAAPPSDAADALAIAITHCHLQQKRIATC RKTGRGHVNYGFKKRN" gene 287420..288028 /gene="ruvA" /locus_tag="REG_0317" CDS 287420..288028 /gene="ruvA" /locus_tag="REG_0317" /inference="protein motif:PFAM:PF01330" /note="COG0632; similar to AA sequence EcoGene EG10923; similar to AA sequence GI 77973528" /codon_start=1 /transl_table=11 /product="DNA-binding subunit of Holliday junction resolvasome" /protein_id="EFL92526.1" /db_xref="PFAM:PF01330" /translation="MIGRLRGIILEKQPPQVLLETHGVGYEIQLPISCFYQLPEAGQE AIIFTQFVVREEAQLLYGFNDKQERALFRELIKVNGVGPKLALAILSGMSAPQFVHAV EQEEISTLIKLPGVGKKTAERLVVEMKDRIKGLNGDLFTNSTAAPLSASLLTTVNNEA EAVSALITLGYKPQEASRLINKIATAEMDCETLIREALRAAL" gene 288052..289056 /gene="ruvB" /locus_tag="REG_0318" CDS 288052..289056 /gene="ruvB" /locus_tag="REG_0318" /note="COG2255; similar to AA sequence EcoGene EG10924; similar to AA sequence GI 77962251" /codon_start=1 /transl_table=11 /product="helicase subunit of Holliday junction resolvasome" /protein_id="EFL92527.1" /translation="MIEADRLISAQIINDEVIIDRAIRPKLLAEYIGQLPVREQMEIF IQAAKQRGEALDHLLIFGPPGLGKTTLANIIANEMGVNLRTTSGPVLEKAGDLAALLT NLESHDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGA TTRAGSLTSPLRDRFGIVQRLEFYQIADLEQIVARSARCLGLTLTLEGAHHLARCSRG TPRITNRLLRRVRDFAEVKAQGVIDGPIAIKALEMLNIDGEGFDYMDRKLLLAIIDKF NGGPVGLDNIAAAIGEERETIEDVLEPYLIQQGFIQRTPRGRIATQHAYQHCGISWKE " gene 289032..289871 /gene="plsC" /locus_tag="REG_0319" CDS 289032..289871 /gene="plsC" /locus_tag="REG_0319" /inference="protein motif:PFAM:PF01553" /note="COG0204; similar to AA sequence EcoGene EG11377; similar to AA sequence GI 45442751" /codon_start=1 /transl_table=11 /product="1-acyl-sn-glycerol-3-phosphate acyltransferase" /protein_id="EFL92528.1" /db_xref="PFAM:PF01553" /translation="MWHQLERIDKTLVRYVNFCVTGARNLRPCQLKEVIMLLVLRVIL AVLYCLLVCIFGGMYCLFNPRDPQHVARFGRLFGRLSTLFGLKVEQRMPTGYQHYGNC IYIANHQNNYDMVTTAKITPPGAVTVGKKSLLWIPLFGPLYWLTGNLLIDRDNKTKAH STITRLVEQIKKRKLSVLMFPEGTRSRGRGLLPFKSGAFRAAMAAGVPIVPICVSTTH GKINLNRFSNGWVIIEMLPPIDTRAYNKEQLHQLTQHCHHLMLEKVKRLDQEVAERVS LVK" gene 290453..293303 /locus_tag="REG_0320" /note="putative extracellular metallopeptidase; similar to GI 58584641" /pseudo gene 293608..294147 /locus_tag="REG_0321" CDS 293608..294147 /locus_tag="REG_0321" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92529.1" /translation="MKKIITKNAPLFATAVLALSTLFTASHANSVENIQKQNLDIPLE LKVPSDDFSVAARNGFSLGQSQEMAYDPIQKKLNPLTIPLLLKSKSGEIKASLNGDIK LINDLDPTKSIEMKASIGNVELKSTKSQDIGEKERNKIGSAVNLVISAKVPGEVAKLT SGYYQGTVSIMFEGDIAKA" gene 294245..294568 /locus_tag="REG_0322" CDS 294245..294568 /locus_tag="REG_0322" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92530.1" /translation="MRLTTLFILLLPLFAGASNHTDSPLALMTDSQAMPDDFKNYFYH SEIPVLVYLNDKLLFEGDITMTEQGQVTLMRVTNFDTTHYQKEEIRRWEKQLTQGIVL GKKTK" gene 294543..294830 /locus_tag="REG_0323" CDS 294543..294830 /locus_tag="REG_0323" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92531.1" /translation="MFWAKKQNNHPLGLMAAEYSLDASALKLYSNNYDKEKIKSRYFD VPTDTAAGLIINNDINYSGGQNSSHSSRFNSSWTSSLSVIVNVVVAQDVKS" mobile_element complement(294787..295834) /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene complement(294830..295620) /locus_tag="REG_0324" /note="ISRin3 putative transposase, pseudogene; similar to COG2801; similar to GI 163854519" /pseudo gene 295865..297133 /locus_tag="REG_0325" CDS 295865..297133 /locus_tag="REG_0325" /note="COG2931; similar to AA sequence GI 77961505" /codon_start=1 /transl_table=11 /product="putative RTX-family protein" /protein_id="EFL92532.1" /translation="MVLSGDEGNNTLGLGRGYAAGGKGTDTYNILRNQSAVAAKIVLK EHAVPQEYSKVLLDYDAIDIASVQLSGEDVYLELRGDNGARTELRLENMYRLHADGQK KSLQHSYVLYTRDGLRITGWPQTVNRAVDGQWPSLTPLVAHYLPDSDQSRRAFLSTAR PEDIQVKFITPSRDGEKQVKVTIKGKPVSRHENNNPTLVPHFLQLAQVGTKFSTQMQG DKRNNTLSTTLLPGDEENNRLWHRHSKDSLKGKGGADRYQVHAGAREVEIDNQDDGSE NDGEIAQDILMLPWDFEDMRIAQQGLDVVLTHASDPHSHPTVRIKRFMQHKNNRHLWL QDKNGVIDELQVTAKHQLLFYGLGEEAKPVHQEAARASSLLLEAMSGFTSSRHSSPDP AIPALLVRIDPSAASLGGIPAKSIRIQMQN" gene 297367..298470 /locus_tag="REG_0326" CDS 297367..298470 /locus_tag="REG_0326" /note="COG2933; similar to AA sequence EcoGene EG11794; similar to AA sequence GI 162420352" /codon_start=1 /transl_table=11 /product="putative methyltransferase" /protein_id="EFL92533.1" /translation="MNKIALYCRAGFEKECAAEISAKAAEYDVFGFARVKEKSGYVLF ECYQPDDADRLIKELPFCELIFARQMMVVGELLRHLPSHDRISSIVGMLIGVIENGGE LRVEVADTNKSKELLKFCRKLTVPLRKCLREHKILLTNYAPSQPVIHVFFIAPGCCYV GYSYSNNNSPFYMGIPRLKLPADAPSRSTLKLEEAFHVFIPIDEWEDRLASGMHAVDL GACPGGWTYQLVQRSMRVQAIDNGMIDQRLIDGGQVAHVRADGFKYEPTSNKIYWLVC DMVEKPAKVTQLISKWLIKGWCREAIFNLKLPMKKRYEEVCKNLARLEGQLGIQGTNA TIRAKQLYHDREEVTIHVRRIWPEMPGRRNERD" gene complement(298675..298938) /locus_tag="REG_0327" CDS complement(298675..298938) /locus_tag="REG_0327" /inference="protein motif:PFAM:PF06005" /note="COG3074; similar to AA sequence EcoGene EG11878; similar to AA sequence GI 37528581" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92534.1" /db_xref="PFAM:PF06005" /translation="MVIIRGRTMSFEVFEKLEAKVQQAIDTITLLQMEIDELKEKNQG LFQKGQEDTNTIEILQRENEQLKQEQSVWKEHLEKILGKMDEV" gene complement(299050..299313) /locus_tag="REG_0328" CDS complement(299050..299313) /locus_tag="REG_0328" /note="similar to AA sequence GI 45441627" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="EFL92535.1" /translation="MKKTVMKKIAIKKVSIIARCLVNTKIFTDMSEAESSIEKIFNDS YSEHSFDEWNTEVSELSANRVIARVAMASKVRVRSLIQELWNH" gene complement(299799..300782) /gene="bioA" /locus_tag="REG_0329" CDS complement(299799..300782) /gene="bioA" /locus_tag="REG_0329" /inference="protein motif:PFAM:PF00202" /note="COG0161; similar to AA sequence EcoGene EG10117; similar to AA sequence GI 77957363" /codon_start=1 /transl_table=11 /product="adenosylmethionine--8-amino-7-oxononanoate transaminase" /protein_id="EFL92536.1" /db_xref="PFAM:PF00202" /translation="MFLADSGSIAVEVALKMALQYWQAKGEKRQRMLALRHSYHGDTL ATISVCDPQNAMHSLYQGYITENLFASVPQCQVNSGQDDKKLFDHWREDDISEFRTLI EQHASEIAAVIFEPIVQGAGGMRFYHPNYLKQVRALCDKYNILLIADEIATGFGRTGQ LFACDHAQITPDILCLGKALTGGYMTLAATLTTRHIAETISKGDAGCFMHGPTFMANP LACALANASLALLEKNRWQNQVKAIEKKLWRALSQLKESPQVADVRVLSAIGVVEMKQ QINVAQLQRQFVEKGVWIRPFGKLIYLMPPYIIQPKQLTQLTDAVTAIVNS" mobile_element complement(300792..302212) /mobile_element_type="insertion sequence:ISRin3" gene complement(300832..301932) /locus_tag="REG_0330" CDS complement(300832..301932) /locus_tag="REG_0330" /note="COG2801; similar to AA sequence GI 224588244" /codon_start=1 /transl_table=11 /product="ISRin3 putative transposase" /protein_id="EFL92537.1" /translation="MTRSEHNAVRGKMIIPEQRQSIMMWITEATQAGARQQQACLLIG LSTRTLQRWQKAIEQVDGRTRRTAPPPHKLSPCERAKLLEITSSAKFAHLPPSQIVPM LADEGLYFASESTFYRVLRDARQLKHRRAERQAKPRFKLRALCATAPNQLYSWDITYL PSRIKGQYFYLYLFLDIFSRKIVGWQVYAEESAQHASDMIKDICQREGILPGQVTLHS DNGSPMKGAILLFTLETLGIATSLSRPSLSNDNPYSESAFKTLKYRPEYPVNPFDNLQ DARAWVEHVVHWYNQEHRHSAIEFVTPAQRHAGLDKALLAQRNTVYEKARAANPTRWA GQIRQWPYVKEVHLNPQKSREKKVKPDAKKAA" mobile_element 302213..302378 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene complement(302451..304442) /gene="tktA" /locus_tag="REG_0331" CDS complement(302451..304442) /gene="tktA" /locus_tag="REG_0331" /inference="protein motif:PFAM:PF00456" /note="COG0021; similar to AA sequence EcoGene EG11427; similar to AA sequence GI 51597508" /codon_start=1 /transl_table=11 /product="transketolase" /protein_id="EFL92538.1" /db_xref="PFAM:PF00456" /translation="MTSRKELANAIRVLSIDAVQKAKSGHPGAPMGMADIAEVLWRDY MQHNPCNPHWINRDRFVLSNGHGSMLIYSLLHLTGYHLSMEELKNFRQFDSKTPGHPE YGYTPGVETTTGPLGQGLANAVGFAIAERTLAAQFNRPDHKIVDHYSYVFIGDGCLME GISHEVCSLAGTLQLGKLIAFYDDNGISIDGDVKGWFTDDTAARFVAYGWHVIENIDG HDAKAIKKAIDEARVTDKPSILICKTIIGQGSPNKAGSHDVHGAPLGDTEIAATRVAL NWHYPPFDIPPAVYTAWDAKETGKEKEAAWNAKWAAYAQAYPQLATEFERRVQGQLPD DWAMESKKFIETLQNTPADIASRKASQNTLEAFGKILPELLGGSADLTPSNLTNWSGS KPLTANHDGNYIHYGVREFGMSAIMNGIALHGGFIPYGATFLMFVEYARNAVRMAALM KIRSIFVYTHDSIGLGEDGPTHQPVEQIASLRLTPNLSTWRPCDQVESAVAWQCALQR QNGPSALLFSRQNLIQQPRTEQQVENISKGGYVLQDCLGQPVLILIATGSEVSLAIDA AKQLTEKGHQVRVVSMPSTDLFDQQEATYRESVLPSAVSARLAIEAGSADYWYKYVGL KGAVIGMNTFGESAPAELLFKEFGFTVENVIEQAEALLQ" gene complement(304745..305389) /locus_tag="REG_0332" CDS complement(304745..305389) /locus_tag="REG_0332" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92539.1" /translation="MPGSTAATSAPQNISRASNNEALQSKKTTPGVHQITGTGQSPAK SFIEQEADLVRAQIYEMEAFLIKFSGEWREAEVKVYDELLTKGKITQKKQSELYRNAD SRSAEAKKEALNVANKAAKEPNISSKFTELKESSESKVISPQESYQNFLHQLVQAGII TKEQSPVLFSMAVDGKAAAQKPSIPAITPSTPLLSKDNLLSLTSDLRKGLEPSK" gene complement(305662..305892) /locus_tag="REG_0333" CDS complement(305662..305892) /locus_tag="REG_0333" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92540.1" /translation="MLIAAKVKPQLKPKPKNIESKVSIDAPITRQKELQNLKTGLRSI PQENPSEKNLKPKEPSQLEEMLAKQRQKIGEL" gene 305927..306833 /locus_tag="REG_0334" /note="conjugal transfer ATP-binding protein TraC; similar to COG3451; similar to GI 145301414" /pseudo gene 306818..307243 /locus_tag="REG_0335" CDS 306818..307243 /locus_tag="REG_0335" /note="similar to AA sequence GI 209916894" /codon_start=1 /transl_table=11 /product="conjugal transfer protein TrbI" /protein_id="EFL92541.1" /translation="MVNNSVTPIKMMLPKKVDKKWSKRRRRCVKPVVIVIACMMALNA AVALLLIQWQSPVIVTFDMKETVDSFMDQSAKTRLSPAQTEQLANRFNRALDSSLAEY RKTQRAIILVAPSVVSGARDITAAVQQDIARRMRTGRDE" gene 307424..307606 /gene="traW" /locus_tag="REG_0336" /note="conjugal transfer pilus assembly protein TraW" /pseudo mobile_element complement(307563..308506) /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene complement(307606..308226) /locus_tag="REG_0337" /note="ISRin3 putative transposase, pseudogene; similar to COG2801; similar to GI 126667305" /pseudo gene 311865..312891 /locus_tag="REG_0338" /note="putative RTX-family protein; similar to COG2931; similar to GI 51597529" /pseudo gene 313273..313770 /gene="ftnA" /locus_tag="REG_0339" CDS 313273..313770 /gene="ftnA" /locus_tag="REG_0339" /inference="protein motif:PFAM:PF00210" /note="COG1528; similar to AA sequence EcoGene EG10921; similar to AA sequence GI 157370184" /codon_start=1 /transl_table=11 /product="ferritin iron storage protein (cytoplasmic)" /protein_id="EFL92542.1" /db_xref="PFAM:PF00210" /translation="MLQDKIKELLTEQLNLEFSSANLYLQMSAWCCRQGFDGAASFLK AHFQEEIQHMQRLVDYLNDHDVSFTIKDITVAPVESKSLAEIFEQAYQHECCNTKKIN ELVWIAMDLKDASTFHFLQWYVAEQREEEKLFKSIRDKLKLIGESNLDLLQVDQNPKT YVKPS" gene 314128..315579 /gene="trkH" /locus_tag="REG_0340" CDS 314128..315579 /gene="trkH" /locus_tag="REG_0340" /inference="protein motif:PFAM:PF02386" /note="COG0168; similar to AA sequence EcoGene EG11021; similar to AA sequence GI 77973707" /codon_start=1 /transl_table=11 /product="potassium transporter" /protein_id="EFL92543.1" /db_xref="PFAM:PF02386" /translation="MHFRAIARIVGFLVILFSVTMFIPGLVALIYHDGAGRAFGETFF VALIIGLLLWLPNKTQKHELKSREGFLIVILFWTVLGSVGALPFIFSERPNLSVSDAF FESFSALTTTGATTLAGLDSLPKAILFYRQMLQWLGGMGIIVLAVAILPILGVGGMQL YRAEMPGPLKDNKMRPRIAETAKTLWLIYLLLTILCAFTLWCAGMSVFDAISHSFSTI AIGGFSNHDASIGYFASPAINTIIAIFLLISACNFSLHFAALSGLNLKAYWRDLEFRV FIFIQLILVTICTAVLWQYNVYPSHSDTLNHAFFQVVSMATTAGFTTDTFAKWPSFLP MLLLSSAFIGGCAGSTGGGLKVIRIILLYLQGTRELKRLVHPNAVYTIKLGRRALPEG ILEAVWGFFSAYALVFIISVLAIIATGVDEFSAFSAVTASLNNLGPGLGVVADNFISM NDTAKWILVITMLFGRLEIFTLLVLFTPTFWRE" gene 315604..316137 /gene="hemG" /locus_tag="REG_0341" CDS 315604..316137 /gene="hemG" /locus_tag="REG_0341" /note="COG4635; similar to AA sequence EcoGene EG11485; similar to AA sequence GI 22124384" /codon_start=1 /transl_table=11 /product="protoporphyrin oxidase" /protein_id="EFL92544.1" /translation="MKVLILYASRDRQTQKIATYIANQLPKMAICEVQALSSSTEIDL AQYQQIMIGASVHYGHFSSVLNTFIKRHIAQLDQLPGAFFAVNLTARKLEKRSPQTNT YVSKFLSRTPWQPKLCAVFAGALRYPQYSWFDRVIIQFIMRITGGETQTDKEVEYTDW QQVSHFAQDFLYLSSKK" gene 316497..318039 /locus_tag="REG_0342" /note="16S ribosomal RNA, operon 2" rRNA 316497..318039 /locus_tag="REG_0342" /product="16S ribosomal RNA" gene 318142..318217 /locus_tag="REG_0343" /note="tRNA-Glu1" tRNA 318142..318217 /locus_tag="REG_0343" /product="tRNA-Glu" gene 318324..321236 /locus_tag="REG_0344" /note="23S ribosomal RNA, operon 2" rRNA 318324..321236 /locus_tag="REG_0344" /product="23S ribosomal RNA" gene 321306..321425 /locus_tag="REG_0345" /note="5S ribosomal RNA, operon 2" rRNA 321306..321425 /locus_tag="REG_0345" /product="5S ribosomal RNA" gene 321488..321564 /locus_tag="REG_0346" /note="tRNA-Asp1" tRNA 321488..321564 /locus_tag="REG_0346" /product="tRNA-Asp" gene 321573..321648 /locus_tag="REG_0347" /note="tRNA-Trp1" tRNA 321573..321648 /locus_tag="REG_0347" /product="tRNA-Trp" gene 321892..322317 /gene="rraB" /locus_tag="REG_0348" CDS 321892..322317 /gene="rraB" /locus_tag="REG_0348" /inference="protein motif:PFAM:PF06877" /note="COG3076; similar to AA sequence EcoGene EG12453; similar to AA sequence GI 157368800" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92545.1" /db_xref="PFAM:PF06877" /translation="MGNSEEWDNQAEHTRQIIEELINDGSDLRALYMIEHHFSAHEAD VLKIAAASAFQLGYEVTDTEELKLEDGSVILCFDAIRETTLDAELIDVQVVQLVNMAN KCNVSYDGWGTYYQDPNGEIDDGNDEIEWLGDDYDGKRH" gene complement(322382..322915) /gene="dsbC" /locus_tag="REG_0349" CDS complement(322382..322915) /gene="dsbC" /locus_tag="REG_0349" /inference="protein motif:PFAM:PF01323" /note="COG1651; similar to AA sequence EcoGene EG11070; similar to AA sequence GI 77963235" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein" /protein_id="EFL92546.1" /db_xref="PFAM:PF01323" /translation="MKKILLLLPILIFLFAKFSYANINNESIDAKLKNLANEMIIYKA PKEKHVVTIFTDISCGFCHKLHNKMKEYNDLGITVQYLAFPRNWKEEAKKREKMGAAK DMESIWCTADRKKSLDNAMKGETISPASCEIDLAKHYNLGIELGVQGTPSILLENGTI LPGYSVPEELNRRLNQN" gene complement(322966..323724) /gene="xerD" /locus_tag="REG_0350" CDS complement(322966..323724) /gene="xerD" /locus_tag="REG_0350" /inference="protein motif:PFAM:PF00589" /note="COG4974; similar to AA sequence EcoGene EG11071; similar to AA sequence GI 77974510" /codon_start=1 /transl_table=11 /product="site-specific tyrosine recombinase" /protein_id="EFL92547.1" /db_xref="PFAM:PF00589" /translation="MLCAQVLDLQRFFAERIDSHYKATSSARLLSAIKRFFQYLYREK LRINDPTALLSSPKLPQRLPKDLSEKQVEALLNAPNVDIPLQLRDKTMLEVLYATGLR VSELVGLIISDISLRQGVLRVIGKGNKERLVPLGEEALYWIEQYIEHGRPWLVNGQAL DAFFPSNRCQKMTRQTFWYRIKHYAILANIDSERLSPHVLRHAFATHLLNHGADLRVV QMLLGHSNLSTTQIYTHVATERLKQLHQRHHPRA" gene complement(323748..324737) /gene="nadA" /locus_tag="REG_0351" CDS complement(323748..324737) /gene="nadA" /locus_tag="REG_0351" /note="COG0379; similar to AA sequence EcoGene EG10630; similar to AA sequence GI 123443143" /codon_start=1 /transl_table=11 /product="Quinolinate synthase" /protein_id="EFL92548.1" /translation="MRRLSIVQKLKIVKKQNAVLVAHYYTDPEIQALVEETGGCVADS LEMARFGNYHPASTLLVAGVRFMGETAKILNPEKRVFMQTLNAECSLDLGCPADEFSA FCNNHPDRTVVVYANTSAAVKARADWVVTSSIALELIEYLDSRGEKIIWAPDRHLGRY IQKKSGADMLCWQASCIVHDEFKIQGLIQMKTLHPDAAILVHPESPEAVIEMADAVGS TSQLIQAAKTLPQKKLVVATDRGIFYKMQQACPDKELYVAPTAGEGATCKVCAHCPWM AMNGFKAIAEGLEQGGLMHEICIDDTLRQQALVPLNRMLNFANRLKLSTSENA" gene complement(324930..325640) /gene="thiQ" /locus_tag="REG_0352" CDS complement(324930..325640) /gene="thiQ" /locus_tag="REG_0352" /inference="protein motif:PFAM:PF00005" /note="COG3840; similar to AA sequence EcoGene EG11572; similar to AA sequence GI 77959766" /codon_start=1 /transl_table=11 /product="putative thiamine transporter ATP-binding subunit" /protein_id="EFL92549.1" /db_xref="PFAM:PF00005" /translation="MITLRKITYLSHNLPIHFNLNIQTGERVAILGPSGAGKSSLLNL IAGFLIPSSGHILLNHQNHTLTPPANRPVSMLFQENNLFSHLTVKQNIALGSHPGLKL NAAQHQRLLQIIEQVGLTAYLNRLPAQLFRRTTPARCMIRSQPILLLDEPFSALDPAL RNEMXXXXXXXXXXQLCTDRQLTLLMVSHNINDAAHIAERTLLIVDGRIYYDGSTKAI IEGSVSEAKVLGIDHHHY" assembly_gap 325120..325148 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(325627..326740) /gene="thiP_2" /locus_tag="REG_0353" /note="fused thiamin transporter subunits of ABC superfamily: membrane components" /pseudo assembly_gap 326741..326840 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="unspecified" misc_feature 326841..550272 /note="Region: supercontig 2" mobile_element complement(326841..327399) /note="partial element" /mobile_element_type="insertion sequence:ISRin1" gene complement(326892..327329) /locus_tag="REG_0354" CDS complement(326892..327329) /locus_tag="REG_0354" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92550.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 327374..328189 /gene="rsmE" /locus_tag="REG_0355" CDS 327374..328189 /gene="rsmE" /locus_tag="REG_0355" /inference="protein motif:PFAM:PF04452" /note="COG1385; similar to AA sequence EcoGene EG12366; similar to AA sequence GI 77961492" /codon_start=1 /transl_table=11 /product="16S rRNA methyltransferase" /protein_id="EFL92551.1" /db_xref="PFAM:PF04452" /translation="MLVSEEVYSTLLSDHSEIVLNDDAVKHVSLVLRMKKGQLLHLFD GSNRLFTAEIIRLDKKKVFVRVDAGCVEDRESPLHLHLGQVISRGERMELTIQKSVEL GVNVLTPLFSERCSIKLSEERLEKKNQQWRKIAIAACEQCGRNVIPEIRAAMSLSDWC QQQDDSLKLTLDPQAKKQMNTLPLSVDKIRLLIGSEGGLSADEIDMTFNNGFEGIRMG PRIFRTETAAIAAITAITAITALQLQFGDLGRGKNDQAWYRDGSYFIDKYKKR" gene 328131..329087 /gene="gshB" /locus_tag="REG_0356" CDS 328131..329087 /gene="gshB" /locus_tag="REG_0356" /inference="protein motif:PFAM:PF02951" /note="COG0189; similar to AA sequence EcoGene EG10419; similar to AA sequence GI 153950930" /codon_start=1 /transl_table=11 /product="Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)" /protein_id="EFL92552.1" /db_xref="PFAM:PF02951" /translation="MIKLGIVMDPISSINIKKDSSFAMLLEAQRRGWELYYMEVVDLY LENGKGKACMRPVEVTDDQKNWYQFGNEQDLPLDELDVILMRKDPPFDTEFIYATYIL ERAEAEGSLVVNKPQSLRDCNEKLFTAWFPELTPHTLVTRQKEKIRAFHQDHEDIILK PLDGMGGASIFRIKKDDPNLSVIIETLTHHGQHFCMAQNFLPAIAEGDKRVLVVDGEP VPYCLARIPAQGETRGNLAAGGRAEAKPLSESDWQIARTVAPRLKEKGLIFVGLDIIG DRLTEINVTSPTCIREIEAAFSISITGMLMNAIENIIAKKQR" gene 329087..329509 /locus_tag="REG_0357" CDS 329087..329509 /locus_tag="REG_0357" /inference="protein motif:PFAM:PF03652" /note="COG0816; similar to AA sequence EcoGene EG13290; similar to AA sequence GI 51597519" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase-like protein" /protein_id="EFL92553.1" /db_xref="PFAM:PF03652" /translation="MINRTIMAFDFGTKSIGVAIGQTITGTATALSALKARDGIPDWL QVEKLLGEWQPELVVVGLPLNMDGTEQPLTSRARKFANRLHSRFNVKIALHDERLSTV AARAHLFNHGGYRALDKGNVDAASAAVILCSWFEQHAQ" gene complement(329595..330656) /locus_tag="REG_0358" CDS complement(329595..330656) /locus_tag="REG_0358" /inference="protein motif:PFAM:PF00933" /note="COG1472; similar to AA sequence EcoGene EG13433; similar to AA sequence GI 54294135" /codon_start=1 /transl_table=11 /product="glycosyl hydrolase domain-containing hypothetical protein" /protein_id="EFL92554.1" /db_xref="PFAM:PF00933" /translation="MPDKVSLKEKIGQMLIVGFHGTTVEENSPIAHLIKNGEIGGVVL YLRNIENPAQVKQLTTDLQRLAAKSGQHLIIAVDHEGGKVNRFKHHYFPTTYSAQQFA QLPIKQKQQLVQSMTETLVDAGVNTNFAPVVDLHRPETFIAGAERSFSALPKEVAENA QLISQAHKNATIDCTYKHFPGHGSAAGDSHKGFVDVTKTWQSEELGPYKSLLNQEDAC SMVMTAHVTHLTFDPSGKPATLSRAIIEGILRQKIRFQGIVVSDCMQMKAIQDNYTLE EALELSINAGVNMLIFGHPSVSNQPAEDWQNPEAIIDLIYRAVVISGKIHPDIIEDNY QRILQLKKKMTSSSPKINS" gene complement(331010..331753) /gene="flhA" /locus_tag="REG_0359" CDS complement(331010..331753) /gene="flhA" /locus_tag="REG_0359" /inference="protein motif:PFAM:PF00771" /note="N terminal truncation; COG1298; similar to AA sequence EcoGene EG14273; similar to AA sequence GI 145597797" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis component" /protein_id="EFL92555.1" /db_xref="PFAM:PF00771" /translation="MDNDPAYGIAIVWIDPEEKPQALGLGYQVVDCASVLATHVNKVV RHHLPELFNYDDITPLHGRLARLSPRLAEDLATTLNFSQLLRIYRQLLAEQVPLKDIV RIAATLIESAAITKDPMLLTADVRYALRHAIVNELNKGKKDLPVYTINNKLENILLEA LNHAQQTSKVALDNFPVDPNILNQLQKDMPIIKEKMKAQGGTQILLVAPQIRPIIARY ARLFAEGLNVLSYNEIPDNIDLDIVGTLE" mobile_element complement(331853..332772) /mobile_element_type="insertion sequence:ISRin1" gene complement(331879..332256) /locus_tag="REG_0360" CDS complement(331879..332256) /locus_tag="REG_0360" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92556.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(332265..332702) /locus_tag="REG_0361" CDS complement(332265..332702) /locus_tag="REG_0361" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92557.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 332853..333575 /gene="flgI" /locus_tag="REG_0362" CDS 332853..333575 /gene="flgI" /locus_tag="REG_0362" /inference="protein motif:PFAM:PF02119" /note="N terminal truncation; COG1706; similar to AA sequence EcoGene EG20265; similar to AA sequence GI 153949286" /codon_start=1 /transl_table=11 /product="Flagellar basal-body P-ring protein" /protein_id="EFL92558.1" /db_xref="PFAM:PF02119" /translation="MVGYSLVVGLDGTGDKNQVKFTGQSMANMLRQFGVQLPAKIDPK VKNVAAVAVSATLPSMYGRGQSIDVTVSSIGDAKSLRGGTLLLTPLRGADGEVYALAQ GNLVVGGVKAEGNSGSSVTVNTATVGRIPNGASIERQAISDFQTNNQVILNLKQPSFK SANNVAGALNRTFGANTAMAQSATNVVVNASQDPGARVAFMSMLEEVQINAGKPTPRI IFNARTGTVVIGDGVAVRAAAV" gene 334185..335597 /gene="flgK" /locus_tag="REG_0363" CDS 334185..335597 /gene="flgK" /locus_tag="REG_0363" /note="COG1256; similar to AA sequence EcoGene EG11967; similar to AA sequence GI 157147096" /codon_start=1 /transl_table=11 /product="flagellar hook-filament junction protein 1" /protein_id="EFL92559.1" /translation="MVNTQENVEMGDLHIITSGLKVAQAGLKTVETNMGNKLNSNYSN QEMTISTTGPGLNSGINPGNGAKIEGIYRRVNESHIKQESQTSSEYHYSETMSDSLTS LEKSVTVNLKNRLQLKLNDFVVQLSEAELHSTDKTTRLSVIEKAKGLASTFNDFNQQI NQQKENLAEKSKSVVNDINQLCAQIAQANQKIIEYQSNGTTNNSLCDQRDATVRELST LLEMDLHRDAKGQYNISLKDGKQLVDGNMARKLELTPLPQGGQTVKLHYSHTSDAINP ACGGQLGAINDLAFETLSDLQKNIQTIAQTLADKFNQQLQAGYDLNGNKGEPLFKFFN NDPQGKILQVEQITPDQLAFSADATLPNDNGNIKELENCLILNKEVRINTMSEMTIRE TLDAVINQFTMGVAGHQEVTKLAKMNLEEIYQIRTSLSGVDENEQYAKFMEFTQHYQS MMELISSYKKIFDSLLAAIR" gene 335618..336541 /gene="flgL" /locus_tag="REG_0364" CDS 335618..336541 /gene="flgL" /locus_tag="REG_0364" /note="COG1344; similar to AA sequence EcoGene EG11545; similar to AA sequence GI 209906122" /codon_start=1 /transl_table=11 /product="flagellar hook-filament junction protein" /protein_id="EFL92560.1" /translation="MNTSVGFIENGMRNPIAVIQKEINRTSKQIENEKQVNCPSENPI ASAYNTLIEREIKQLGSYKKINQHLTSSFSSQKNSMGNIEDTLNRIKDILLLVANDVH STEDRRVFGQKLAGNIERIMSSLNAQNEERNYLFAGTKSNEQAVKESSGSYSDNGNQQ YKEVSVDKNRRMKTNVNITSAFSTNNDTRLDLLDRLKKLSDDMKQDKPLADYQGEIND LLEPTENAINSIIAANAELAIRIESLASLDKNQQTKIELHKNLSQQLVGMNEIEKYQF IDRLLELHLSKEVLSKILSKNSEFSIWQSIR" gene 336552..337571 /locus_tag="REG_0365" CDS 336552..337571 /locus_tag="REG_0365" /note="similar to AA sequence GI 158327326" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92561.1" /translation="MSVKLQTTAAASKGLRKQRAVAKVNHSRVQKSRQLITTFPDYPL ISSTPLRYNVQLNQQLTSVQQAYDYLIKLESQLSHLYSIIDQEKDLNVIQQQANTLFS LLLQRTTLSAGTVDRQLKIVLAGSAKVNFFSDEFDKLLQQSAGETLLFSLTGQKEEMI GLKLPEQSLPKQRLLQLNKGLGRLGIHGRYNDHDQVVFTINESRWRRLNNHLKVKGEG HCYPENEFVLVQLRLESALEQQIQHIISDPSGAKSYLDQIKASLHQITQQLHWLAIHK KNVGNRITAMSTFPEAGTAILASHALFQQLSDDNISYSTLSQAISGQGNVRTATVKNL LLGYA" gene complement(337860..338258) /gene="crl" /locus_tag="REG_0366" CDS complement(337860..338258) /gene="crl" /locus_tag="REG_0366" /inference="protein motif:PFAM:PF07417" /note="similar to AA sequence EcoGene EG11092; similar to AA sequence GI 77974369" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional regulator" /protein_id="EFL92562.1" /db_xref="PFAM:PF07417" /translation="MTLNAHPKSKLMKNFALLGPYLREDQCRNDHFFFDCLAICINVK LSAEKRQFWGWWVELKPKEGGFTYIYQLGLYSKSKGWQAEKIKTLEVQDKLETTLRTF HQRLNDMIVAMELTLEPAQDHSDHGIKLLA" gene complement(338326..339509) /gene="nhaA" /locus_tag="REG_0367" /note="Na+/H+ antiporter; similar to COG3004; EcoGene EG10652" /pseudo gene complement(340240..341379) /gene="dnaJ" /locus_tag="REG_0368" CDS complement(340240..341379) /gene="dnaJ" /locus_tag="REG_0368" /inference="protein motif:PFAM:PF00226" /note="COG0484; similar to AA sequence EcoGene EG10240; similar to AA sequence GI 22127579" /codon_start=1 /transl_table=11 /product="DnaJ-class molecular chaperone with C-terminal Zn finger domain" /protein_id="EFL92563.1" /db_xref="PFAM:PF00226" /translation="MADKDYYQILGVDRNATENEIKKAYKKQAMKCHPDRCPGDKNAE AKFKEVNKANEILSNKEKRAAYDQYGHAAFDQQGGGAHYNTQFEEAFGSVFSHFSDIF DGGARRGRNRSPSKGSDLGYPISLTLEEAVKGVTKEITIPTQEKCGYCHGSGAKPGSS PMTCSTCGGAGQVIMGQGFLKIQQNCPKCHGQGAIIKDPCTQCHGLGRIKKSKTLAVK IPPGVDTGDRIRLTGEGEAGTHGGPAGDLYVEMQIKPHLIFQRDGNNLSCEVPINFTL AALGGEIEVPTLQGPVKLKIPAETQTGKLFRCAGKGVKSVRSDGPGDLHCRVIVETPV KLNEEQKQLLSKLNESFSGSAGEKNSPLSQKFLDRVKKFVDHLTR" gene complement(341724..343673) /gene="dnaK" /locus_tag="REG_0369" CDS complement(341724..343673) /gene="dnaK" /locus_tag="REG_0369" /note="COG0443; similar to AA sequence EcoGene EG10241; similar to AA sequence GI 156935467" /codon_start=1 /transl_table=11 /product="Molecular chaperone" /protein_id="EFL92564.1" /translation="MTEQKKRSGKIIGIDLGTTNSCVAVMEGKTAKVIENQEGDRTTP SIIAYTNDGETLVGQPAKRQAVTNPKNTLHAIKRLIGRKFEDQEVQRDEKIMPYKIVK AANGDAWVDIKDKKKAPPEISAEILKKMKKTAEDYLGEEVTAAVITVPAYFNDAQRQA TKDAGRIAGLEVKRIINEPTAAALAYGLDKGDSTIAVYDLGGGTFDISIIEINDTDGD KVFEVLATNGDTHLGGEDFDNRMINYLVAEFKKDQGIDLTNDPLAMQRLKEAAEKAKI ELSSAQQTDVNLPYITADTSGPKHMNIRVTRAKLESLVEDLVDRSIEPLRKALEDAKL SVSDISDIILVGGQTRMPLVQQKVKKFFGKEPRKDVNPDEAVAVGAAIQGGVLSGDVT DLLLLDVTPLSLGIETMGGVMTPLISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGER KRVSDNKSLGQFNLDGINSAPRGMPQIEVTFDIDANGILHVSAKDKNSGKEQKITIQA SSGLSKEEIEKMVRDAEANAETDRKFEELVKIRNEADQLTHSTEKQLKEVGDKLAAED KTAVEAALQALETAKKGEDKADIEAKSQALIQVSSKLQEIAAQQNTNDPAAGADSNNN TPPKEDIVDAEFEEVKDDEQKKNKK" gene complement(343873..344505) /gene="efp" /locus_tag="REG_0371" CDS complement(343873..344505) /gene="efp" /locus_tag="REG_0371" /inference="protein motif:PFAM:PF08207" /note="COG0231; similar to AA sequence EcoGene EG12099; similar to AA sequence GI 37527975" /codon_start=1 /transl_table=11 /product="Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)" /protein_id="EFL92565.1" /db_xref="PFAM:PF08207" /translation="MAYLRLQWSSFFDLVTHFKRVIMATYSSNEFRSGLKIMLDGEPC SVIESEFVKPGKGQAFARTRIRKLISGKLLEKTFKSTDTVAAADVVDMNLTYLYNDGE FWHFMNNNTFEQLAADAKATGDNAKWLVEQAECILTLWNGQPIAVTPPNFVELEIVET DPGLKGDTAGSGGKPATLSTGAVVKVPLFVQIGEIVKVDTRSGEYVARVK" gene 344475..345491 /gene="yjeK" /locus_tag="REG_0370" CDS 344475..345491 /gene="yjeK" /locus_tag="REG_0370" /note="COG1509; similar to AA sequence EcoGene EG12473; similar to AA sequence GI 123440740" /codon_start=1 /transl_table=11 /product="putative lysine aminomutase" /protein_id="EFL92566.1" /translation="MTTIVTLNKPIIEDWLQQLANVITDPDELLQLLQLDTHPELPQG KSARRLFPLRVPRAFVALMRKGDANDPLLRQVLTSSAEFISPEDFITDPLAEQRTAAP GLLHKYGNRALLLVKGSCAINCRYCFRRHFPYQDNQGNKKNWQLALDYIRQHPELDEI IFSGGDPLMAKDRELSWLIDALEKIAHIKRLRIHTRLPVVIPARITIALCQKFHASRL QIVLVTHINHANEIDNVLCDSMAKLKTKGVTLLNQSVLLRGVNDNVEVLAQLSNALFN AGILPYYLHVLDKVKGAAHFMVNDDEARRLINGLLGCISGYLVPRLVREIAGEKSKTP LTLS" gene 345774..348431 /gene="aceE" /locus_tag="REG_0372" CDS 345774..348431 /gene="aceE" /locus_tag="REG_0372" /note="COG2609; similar to AA sequence EcoGene EG10024; similar to AA sequence GI 77977277" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase (E1 component)" /protein_id="EFL92567.1" /translation="MSDDLKNDVDPVETGDWLQAIESVIREEGVERAYYLLNQVLNAA RKDGVNITLGATDYINTITLEEEPAYPGNLELEQRIRSAIRWNAVMMVLRASKKDLDL GGHIASFQSSATFYEVCFHHFFRARNEKDGGDLVFFQGHISPGIYARAFLEGRLTKEQ LNNFRQEIDGKGLSSYPHPKLMPEFWQFPTVSMGLGPINAIYQAKFLKYLNHRGLKNT LGQRVYAFLGDGEMDEPESKGAITVASREKLDNLVFVINCNLQRLDGPVIGNGKIINE LEGIFAGAGWQVLKVIWGDRWDALLRKDTSGKLIQLMNETLDGDYQTLKSKDGAYVRE HFFGRFPETKALVQDMSDDEIWSLNRGGHDPKKIFAALKKAQDTKGKPTVILAHTVKG YGMGETAEGKNIAHQVKKMNMLGVHHLRNRFEVPVTGADIEKLPYITFDKDSEEYQYL HARREALSGYLPTRLTKFTEKLTLPTQADFSALLEEQSKEISTTIAFVRVLNVLLKNK SIKDRIVPIIADEARTFGMEGLFRQIGIYSPEGQQYTPQDREQVAYYKEDTKGQILQE GINELGAAASWLAAATSYSTNDLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIG GTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAIIMHDGLERMYGSKQE NIYYYITTLNENYHMPAMPKGVEEGICKGIYKLETLEGSKGKVQLMGSGAILRHVRQA AQILSEDYNLGSDVYSVTSFTELARDGQDCERWNRLHPTETPRTPYITQVMHDAPTIA STDYMKLFAEQIRSYLPARQFCVLGTDGYGRSDSRENLRHHFEVDASYVVVAALSEFA KQGDIDSKVVAEAIIKFGIDADKINPRLA" gene 348462..349778 /gene="aceF" /locus_tag="REG_0373" CDS 348462..349778 /gene="aceF" /locus_tag="REG_0373" /inference="protein motif:PFAM:PF00364" /note="COG0508; similar to AA sequence EcoGene EG10025; similar to AA sequence GI 37527490" /codon_start=1 /transl_table=11 /product="lipoate acetyltransferase / dihydrolipoamide acetyltransferase (E2 component)" /protein_id="EFL92568.1" /db_xref="PFAM:PF00364" /translation="MSIEIKVPDIGTDAVEITEIMVKVGDTIEIEQSLLTVEGDKASM EIPSPHAGIIKEIKVALGEKIETGKLIMICEAASDNHTPAPAAGNVEEKTAVETAPIA TDNSHIDKTKIDNNEADHSQIANTDDFTENSAYVHATPVIRRLAREVGINLAKVTATG RKGRILREDLQRYVEKVVNAAESGAVTTGGLPGMLPWPRVDFSKFGEVEEVELGRIQK ISGANLSRNWVVIPHVTQFDETDITELEAFRKQQNSEAEKKKLAVKITPLVFVMKAAA NALEAYPRFNSSLSADAQTLTLKKYINIGVAVDTPNGLVVPVFRDVNKKSVIALSREL ALTSQKAREGKLTAADMQGCCFTISSLGGIGGKAFTPIVNAPEVAILGVSKSSIKPIW NGKEFEPRLMLPLSLSFDHRVIDGAAGARFVSHIGSIMADIRRLIM" gene 349858..351357 /gene="lpd" /locus_tag="REG_0374" CDS 349858..351357 /gene="lpd" /locus_tag="REG_0374" /note="E3 component of three enzyme complexes; COG1249; similar to AA sequence EcoGene EG10543; similar to AA sequence GI 157372243" /codon_start=1 /transl_table=11 /product="lipoamide dehydrogenase" /protein_id="EFL92569.1" /translation="MIRANPRGGFKGEGYTRQKMQEGMMSKKIKTQVVVIGAGPAGYS AAFRCADLGLETVLVERYDTLGGVCLNVGCIPSKALLHVAKVINEAKAIGNHGIAFGE PSIDLDKVRGWKEKVISQLTGGLAGMAKGRKVNVVNGKGKFTDANTLAVENTAGEITA TITFDNAIIAAGSHPTKLPFIPHKDPRIWDSTDALELKSVPKKLLIMGGGIIGLEMAT VYRALGSEIDVVEMFDQVIPAADKDVIKVFTNKISKQFNLMLETKVTKVEAKTDGIYV TMEGKKPTEPQCYDAVLVAVGRVTNGKSLDAGKADVEVSEQGFINVDKQLRTNVPHIL AIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVGVTEKEA KEKGISFETATFPWAASGRAIASDCAEGITKLIFDKETHRIIGGAIVGSNGGELLGEI GLAIEMGCDAEDLALTIHAHPTLHESVGLAAEIFEGSITDLPNPKAKKK" gene complement(351536..352663) /gene="obgE" /locus_tag="REG_0375" CDS complement(351536..352663) /gene="obgE" /locus_tag="REG_0375" /inference="protein motif:PFAM:PF01018" /note="COG0536; similar to AA sequence EcoGene EG12795; similar to AA sequence GI 77974006" /codon_start=1 /transl_table=11 /product="putative GTPase" /protein_id="EFL92570.1" /db_xref="PFAM:PF01018" /translation="MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPNGGDGGDGGD IYLLADENLNTLIDYRFIKTFRAERGQNGQSSDCTGKRGKDITIHVPVGTRIFDQTTG EILGDMLHHQQRLMVAKGGFHGLGNTRFKSSINRAPRQKTLGTAGETRELALELLLLA DVGMLGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVRMDHQQSFVVADIPGLI AGASAGVGLGIRFLKHLERCRVLLHLIDLAPIDGSDPVENAKIIINELQLYNANLVDK PRWLVFNKVDLIDEKEAEVRAKTIAAALGWQEKYYTISAVNRHGVEALCWDVMNFINT QPKMLPVEEKTSEDMAFKWDDNHQQPSTSSDTKTEQIWQDD" gene complement(352982..353239) /gene="rpmA" /locus_tag="REG_0376" CDS complement(352982..353239) /gene="rpmA" /locus_tag="REG_0376" /inference="protein motif:PFAM:PF01016" /note="COG0211; similar to AA sequence EcoGene EG50002; similar to AA sequence GI 77977595" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L27" /protein_id="EFL92571.1" /db_xref="PFAM:PF01016" /translation="MAHKKAGGSTRNGRDSESKRLGVKRFGGETVLAGSIIVRQRGTK FHAGVNVGCGRDHTLYALTDGKIKFNVQGAKNRKFVSIEAE" gene complement(353261..353572) /gene="rplU" /locus_tag="REG_0377" CDS complement(353261..353572) /gene="rplU" /locus_tag="REG_0377" /inference="protein motif:PFAM:PF00829" /note="COG0261; similar to AA sequence EcoGene EG50001; similar to AA sequence GI 77977596" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L21" /protein_id="EFL92572.1" /db_xref="PFAM:PF00829" /translation="MYGVFQSGGKQHRVSEGHIVRLEKLDVQEGEIVEFDQVLMVADG ENIKIGAPWLDGVKITATVMAHGRGEKIKIVKFHRRKHYRKQQGHRQSFTDIKITGIS A" gene 353787..354770 /gene="ispB" /locus_tag="REG_0378" CDS 353787..354770 /gene="ispB" /locus_tag="REG_0378" /note="COG0142; similar to AA sequence EcoGene EG10017; similar to AA sequence GI 77974002" /codon_start=1 /transl_table=11 /product="octaprenyl diphosphate synthase" /protein_id="EFL92573.1" /translation="MLNNASILDEVKELTAKDMATVNDTIEEQMRSDVALITEISHYI INNGGKRIRPMIAILVAQALGYKGNQHITIAVLIEFIHTATLLHDDVVDNSDLRRGKA TVNAQFGNAASVLVGDFIYTRAFQMMTQLGSMRVLEVMSTATNMIAKGEVQQLINCKD PRITEENYLSVIGSKTAKLFEAASQSSAILAGANKEKELALQRYGHHIGIAFQLIDDL LDYSPENSTGKKSGADLAEGKVTLPLLHAIEKGTPEQTALLCNAIQQDNGRHLFTSVQ QVLKEYGSLNYTRQCAKTEANKAIAELQVLPENPYRIALEKLAKFSIMREY" gene complement(354848..355240) /locus_tag="REG_0379" CDS complement(354848..355240) /locus_tag="REG_0379" /inference="protein motif:PFAM:PF02316" /note="similar to AA sequence EcoGene EG12779; similar to AA sequence GI 108806062" /codon_start=1 /transl_table=11 /product="hypothetical phage protein" /protein_id="EFL92574.1" /db_xref="PFAM:PF02316" /translation="MKKEWYAAKELAGIPGFPSSPQGINLRAKRDDWKKRRRSGVQGK ALEYHIDNLPDNILNILKLKEKNVQYHVNKRESSSILIEAIERLTESKREKVISFITS FGTEGLIELIDQRQADNPQEKSPLKQED" gene complement(355545..355679) /gene="nlp" /locus_tag="REG_0380" /note="regulator for maltose metabolism; similar to GI 22124583" /pseudo mobile_element complement(356015..356183) /note="partial element" /mobile_element_type="insertion sequence:ISRin1" gene complement(356041..356183) /locus_tag="REG_0381" /note="ISRin1, transposase orfB, pseudogene; blastx intergenic; similar to GI 189502695" /pseudo mobile_element 356185..356877 /note="partial element" /mobile_element_type="insertion sequence:ISRin5" gene 356308..356926 /locus_tag="REG_0382" /note="ISRin5 putative transposase, pseudogene; similar to GI 28870376" /pseudo gene complement(356978..357679) /locus_tag="REG_0383" CDS complement(356978..357679) /locus_tag="REG_0383" /note="COG2197; similar to AA sequence GI 123442304" /codon_start=1 /transl_table=11 /product="PAS and GerE domain-containing putative transcriptional regulator" /protein_id="EFL92575.1" /translation="MTNINNALKSFPLISIMESSNDIWGIKDCESRFIYTNRAFREFL NIPARFKIEGKRDEHLPTPVSEFASELKKQDLDAISSRQRVTLIKTHFFGREKKLQPY WYEKFPLYNENNECVGTVFYGKKLDFISPQQYVSKITPSGLAVDPPIKLFNQSELRII FFILQSMSAKEVARKLYRSHRTIENNLCRIYQKSKVNSLQEFKKFCHKAGFDRYIPQE FIPIGIQFIENIAES" gene complement(358436..359128) /locus_tag="REG_0384" CDS complement(358436..359128) /locus_tag="REG_0384" /inference="protein motif:PFAM:PF08448,PF00196" /note="similar to AA sequence GI 27479693" /codon_start=1 /transl_table=11 /product="PAS and GerE domain-containing putative transcriptional regulator" /protein_id="EFL92576.1" /db_xref="PFAM:PF00196" /db_xref="PFAM:PF08448" /translation="MIITENTDNERVLSNITRSLDLLPDPYAVRGYDSRHLYANLAVA KLVGLRKVGDIIDRLDYEIPSLLYEDEDSLKAWRLQDQRISETRKPLAMLEVHPDAVN SPYIIRKVPLYNSNNEIIGVFCSMKYLEVFSPNDFVRGKLPGSLLLNRPDKSFSEREY EIIFLKLQGMTSKSIGNILCLSPRTIEHALERLYNKAGVNHIEDFISFCEQHDFHRYL PHKFLQIRTFRI" gene 359689..360618 /locus_tag="REG_0385" CDS 359689..360618 /locus_tag="REG_0385" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92577.1" /translation="MDNIKTELINPMLGEIATFLLQEHKIKPDEVVVSILGTAGMRKV TGVNQKEIYARAKEAVSDNNFKPGEFRTISGQEEGVYAWVDVNYLNGTLEKKKTKGII EIGGSSAQIAFATDKTKHQDDNIMSININDVNYNIYAVSFLGLGSNDFNLSITEKSEK DFCYPKEYNENNISGNFSLEKCSAIVDSILTQFPNLKKLTQNKEFYKSEFFAISGLYQ TLNFFGVKDEDKTGLTNKIKYLCKKDYPDIVIYSENRDRYNTFNKCANALFANELLFN VLNLPNSHIKAVKKINNTNIRWTLGYAILSQNL" gene complement(360940..361662) /gene="glnQ" /locus_tag="REG_0386" CDS complement(360940..361662) /gene="glnQ" /locus_tag="REG_0386" /note="COG1126; similar to AA sequence EcoGene EG10389; similar to AA sequence GI 77961175" /codon_start=1 /transl_table=11 /product="ATPase component of ABC-type polar amino acid transport system" /protein_id="EFL92578.1" /translation="MIKLKNVSKHFGKTQVLHDINLNITKGEVVVIIGPSGSGKSTLL RCINKLEVITEGLLIFDGLDINDPNIDERLIRREAGMVFQQFYLFPHLTALENVAFGP IRVRGIQKTEAKKLSLDLLAKVGLSERAHHYPGELSGGQQQRVAIARALAVKPKLMLF DEPTSALDPELRHEVLTVMKDLAEEGMTMVIVTHEVGFAHQVASRLIFIDQGRIAQDG APNSLMTNPPCERLREFLQHVA" gene complement(361659..362315) /gene="glnP" /locus_tag="REG_0387" CDS complement(361659..362315) /gene="glnP" /locus_tag="REG_0387" /note="COG0765; similar to AA sequence EcoGene EG10388; similar to AA sequence GI 123443061" /codon_start=1 /transl_table=11 /product="permease component of ABC-type amino acid transport system" /protein_id="EFL92579.1" /translation="MQFEWSAIWPALPILLEGAKLTLWISILGLLGGLIIGVVAGFAR AYGGKISSNIALVFIELIRGTPIIVQVMFIYFAMPIMMPIRIDPFTAAVVTIMINSGA YIAEITRGAVLSIHKGFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIKD TSLFMVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLVITLALSFVLRKVEKKLKII " gene complement(362480..363220) /gene="glnH" /locus_tag="REG_0388" CDS complement(362480..363220) /gene="glnH" /locus_tag="REG_0388" /inference="protein motif:PFAM:PF00497" /note="COG0834; similar to AA sequence EcoGene EG10386; similar to AA sequence GI 51596867" /codon_start=1 /transl_table=11 /product="periplasmic component/domain of ABC-type amino acid transport/signal transduction systems" /protein_id="EFL92580.1" /db_xref="PFAM:PF00497" /translation="MKLLVKILLAGLTLAFAVSAYCEQKKLIVATDTAFVPFEFKEGD NYVGFDIDLWQAIAEQLHVDYQLKPMDFSGIIPALQTKNVDVALAGITITDDRKKVID FSDGYYDSGLLIMVKNNNNDIKGEQDLQGKVVAVKMGTGSVDYAKTNIKTKNLRQFPN IDNAYLELATGRADAVLHDAPNILYFIKTAGNDRFKAVGAPIKAQQYGIAFLKGSELR EKVNQALQVLYEKGIYAEIYKKWFGDTQ" gene 363618..364415 /locus_tag="REG_0389" CDS 363618..364415 /locus_tag="REG_0389" /inference="protein motif:PFAM:PF04055" /note="COG0602; similar to AA sequence EcoGene EG13034; similar to AA sequence GI 22124729" /codon_start=1 /transl_table=11 /product="radical SAM superfamily domain-containing hypothetical protein" /protein_id="EFL92581.1" /db_xref="PFAM:PF04055" /translation="MKFALGANKGVSQNMRGQFGEKITICNNHRSFLLLLEILMLYPI NEIFQSLQGEGYFTNVPAIFIRLQGCPVACSWCDTKHTWDIKKDKEIDIQGITVKTVA KDTWSNANEQQLVAICKEKYQARHVVITGGEPCLYDLQPLTSLLEENGYRCQIETSGT HPVRCSTASWVTVSPKIGMKGGLKLLDQALQRADEIKHPVARERDIERLNNLLDKLND GKKPVIALQPIRKTEKESEEATKLCIETCIKHNWRLSVQMHKYLKIR" gene 364575..365033 /locus_tag="REG_0390" CDS 364575..365033 /locus_tag="REG_0390" /inference="protein motif:PFAM:PF04217" /note="COG3092; similar to AA sequence EcoGene EG14106; similar to AA sequence GI 77956854" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92582.1" /db_xref="PFAM:PF04217" /translation="MMTHTPDPIASWFQVLKCGQKYMKTWPLDKRLAPIFLEHHVIKV TRFGIRFMPPLAIFMLTWQIALGGSLGLAVTGALFACSLPLQGLWWLGKRSMMPLPPR LVRWFHDIHQKLAQAGKVVVVAEQCLTYQSLAELLKGAFKQLDKTLFDGL" gene complement(365099..365743) /locus_tag="REG_0391" CDS complement(365099..365743) /locus_tag="REG_0391" /inference="protein motif:PFAM:PF01966" /note="COG1896; similar to AA sequence EcoGene EG14102; similar to AA sequence GI 50121957" /codon_start=1 /transl_table=11 /product="HD domain-containing hypothetical protein" /protein_id="EFL92583.1" /db_xref="PFAM:PF01966" /translation="MTCSKPENKSHFFAHLSRLSLINRWPLMRTVRSENVSEHSLQVA FVAHALAIIQNRLFEANFNAERVALLAMYHDVSEVLTGDMATPVKYHNPQITHEYKQI EKSAQKKLIAMLPTALQKDFRFISDDCDCSKSDDCSCNKEEKLIVKQADTLCAYLKCL EELAAHNNEFICAEKRLRDVLEKYGSPAVDYFMKVFVPSFKLSLHEISDDSPAI" gene complement(365793..367049) /locus_tag="REG_0392" CDS complement(365793..367049) /locus_tag="REG_0392" /inference="protein motif:PFAM:PF00155" /note="COG0436; similar to AA sequence EcoGene EG14101; similar to AA sequence GI 21958421" /codon_start=1 /transl_table=11 /product="predicted aminotransferase" /protein_id="EFL92584.1" /db_xref="PFAM:PF00155" /translation="MMRFTNQGVFFMSQIKKSNKLDNVCYDIRGSVLKEAKRLEEEGH KVLKLNIGNPAPFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQAKGIC DLTIEDIYIGNGVSELILQSMQALLNTGDEMLIPAPDYPLWTAAVSLSGGKAVHYRCD EAAYWFPDIEDIKRNITPRTRGIVIINPNNPTGAVYSEAILKEIVTLARKHNLIIFAD EIYDKILYDDAKHYSIAALAPDLLTVTFSGLSKTYRVAGFRQGWMVLNGPKENAESYI EGLDILASMRLCANVPMQHAIQTALGGYQSINEFIQPGGRLYEQRNLAWELLTQIPGV SCVKPMGALYMFPRIDRKGFNVHDDEKMVLDLLLQQKVLLVQGRAFNWPHPDHVRIVI LPCVDELKGAIAKLGQFLETYHQPPT" gene 367214..367705 /gene="argR" /locus_tag="REG_0393" CDS 367214..367705 /gene="argR" /locus_tag="REG_0393" /inference="protein motif:PFAM:PF01316,PF02863" /note="COG1438; similar to AA sequence EcoGene EG10070; similar to AA sequence GI 50119632" /codon_start=1 /transl_table=11 /product="arginine repressor" /protein_id="EFL92585.1" /db_xref="PFAM:PF01316" /db_xref="PFAM:PF02863" /translation="MGNSVKQANLNKRFKELLTEEKCRSHNEIVLLLQDEGFENINQS KVSRMLTKFGAVRVRNAKMEMVYRLPIEPLLPTVSSQLKNLVLDIKHNHSLVVIHTSA GAAQLIARLLDSLRETEGILGNIAGDDTIFTTPIKEVSTENLYKSMRAWFGIKQAQEI SNI" gene 367743..369674 /locus_tag="REG_0394" CDS 367743..369674 /locus_tag="REG_0394" /inference="protein motif:PFAM:PF01103,PF07244" /note="COG0729; similar to AA sequence EcoGene EG12513; similar to AA sequence GI 77973989" /codon_start=1 /transl_table=11 /product="conserved outer membrane protein" /protein_id="EFL92586.1" /db_xref="PFAM:PF01103" /db_xref="PFAM:PF07244" /translation="MPYYLYCLRSSALNQIKLIRLYPQPFKLPLGGQDVRPMSVDIRP DEANPRSHIASKITLTKGSKQVSRYPIFYFLCVIFFVIPFAHATHIQFQVKGLSGELE KNVNARLSTIKGDNVNFDGRFQAQVNVAVRQGLRALGYYHPVIHFNLQPGSADRSTLI INVIAGKAVLIAGTDIKLQGAAKDDQEYQTLIIKETPKIGSVLHHGKFDDFTGSLSTL ALRKGYFDADMIKKQLGVADKLHQAFWDIDFDSGQRYRFGKVVFQGAQIREDYLQNLI PFEVGNYYHSDDLAEFNRRLAATNWFNSVVVSPNFEDAKINKILPLDAIVTPRTKNTV ELGGGYATDTGPRLKASWRKPWLNNRGHSFTSNANISAPEQSLDFSYRIPLLENPLDH YYLLQSGLKRKRVNDTRSDLTTLNVARFWKMSSGWQPSVNLRWSLDHYTQGQVINTTM LLYPGVSISRTRQRGGMMPTWGDSQRYSFDVSNTRWGSNVDFGIIQAQQVWIRSFGEK NRVILRGHLGWIETNDFDRVPPLLRFFAGGDRSIRGYKYQSISPLDSEGKLSGASKLI TGSLEYQYKVANRWWGAIFVDGGEAVNDIRRSNFKIGAGMGIRWESPLGPLKFDIALP VGDKKENSVQFYIGLGPEL" gene 369671..373432 /locus_tag="REG_0395" CDS 369671..373432 /locus_tag="REG_0395" /inference="protein motif:PFAM:PF04357" /note="COG2911; similar to AA sequence EcoGene EG12514; similar to AA sequence GI 123440787" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92587.1" /db_xref="PFAM:PF04357" /translation="MSWIKKLSLALLLIVLSLVGTTVTLLSTEGGLHFLLNRAVGWVP GLQMASVSGGWQDLRLKGIEYQMPGMIVKTGQLDLSLQFSCLKNKEICINALTAQDVV VMINSKALPVSDPDPADKPLTDLRTPYPIILKLLALNRVKITVDNQTISLEALRTAAR WQQRSLSLMPTQINGLLVSSTLPPVEKPVSPKKHEAPLPEISLVEHLQTFFATPLLPK LPDFSLPLDIQIKEILAQQIRIKGDQDVLITHFLLKGSTQGQQVQLDDLQIKSPQGEL SAKGNLTLAGKWPLDIVANSTLNIAPLKEEKIKLKLAGDLRGQLALALNLSGSVSAQL TAKTQLSEIGLPLSATLQSQQLRWPLTGDKQYQLNNFNMRFDGKMTDYALSLRSDFQG LDLPSAQFTLEGKGDLAQFYLTALNLAALQGNAHLTGRVDWRNAINWHQILTVSGINT EKQWPAWPAKLDGKITTQGSVSRDGHWQMQIPELTLNGNIKQKQLTARGAISGNSAGQ WHVPAINLALGRNSLNIKGDLDKNWALDASLDAPELNGALPGLGGVAKGVVKLRGSLK TPQVLADLSAYGLQWQKLSIKGVKIEGNLYLEERMQSQLMIQIEQLKQENFAISGLTL TAKGSEKQHQLHLTLAGHPMAGQLVLNGRFDRQQQRWWGNLSDTYVDTPVGEWRLNRV ATLEYLNMPQKLTIGSHCWQHANAELCAPGRIEIGESGQAHVLLKRFDLAMMKPLLGS DTLLSGIFTGRGDISWQADDTLPQFDMALVGHGVKVQQRIQSNLVPIAFDTLNLNAGL KKGNAQIDWLIKLTDNGQLDGQLKIEQPQGQRNLSGNITVSDVSLAMLNPILSYGETA SGVLNSKLRLAGNANNPLLYGQLALDKIGFDGSWMPFKINESRLLMNFNGMTSTLEGL IRTAQGQLNLIGEADWRTPDAWHAKIAAKGDKLRVTMPPMLQADVSPDLAFVASPQSL KLEGQVDIPWARVLIEKIPEDVVAVSSDEVMLNNQLQPIAPRNTAMAIQSNLNIVLGS DVRIDAFGLQAQLQGALKVVQDKRGLGLHGQITIPQGSFHAYGQDLIVKKGELLFSGP ADQPLLNIDAIRNPETTENKVTAGVLVTGMANAPRVDVYSDPAMSQQEALSYLLRGQG LTNSGADGGVMTSMLIGIGVAKSGKLVGKIGEAFGVSNLTLDTEGVGNSSKVVVSGNV TKNLQVKYGVGIFDSLAALTLRYQLMPKLYLEAVSGINQTLDMLYRFEF" gene 373435..373611 /locus_tag="REG_0396" /note="hypothetical protein; interrupted by IS element; similar to COG2105; similar to GI 77961843; EcoGene EG12516" /pseudo mobile_element 373589..374508 /mobile_element_type="insertion sequence:ISRin1" gene 373659..374096 /locus_tag="REG_0397" CDS 373659..374096 /locus_tag="REG_0397" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92588.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 374105..374482 /locus_tag="REG_0398" CDS 374105..374482 /locus_tag="REG_0398" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92589.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 374483..374725 /locus_tag="REG_0399" /note="hypothetical protein; interrupted by IS element; similar to COG2105; similar to GI 22124576; EcoGene EG12516" /pseudo gene complement(374817..375368) /gene="ppa" /locus_tag="REG_0400" CDS complement(374817..375368) /gene="ppa" /locus_tag="REG_0400" /inference="protein motif:PFAM:PF00719" /note="COG0221; similar to AA sequence EcoGene EG10755; similar to AA sequence GI 211638403" /codon_start=1 /transl_table=11 /product="inorganic pyrophosphatase" /protein_id="EFL92590.1" /db_xref="PFAM:PF00719" /translation="MSLNLVSAGEELPNDIYVIIEIPANANPIKYEVNKESGALFIDR FISSPMFYPCNYGYINHTLSLDGDPIDVLVPTPYPLQPGSVIRCRPIGMLKMTDDGGE DAKVVAVPHSKLTTEYDKIKEVKDLPELLKNQIVHFFEHYKGLEKGKWVKIGGWESAE AAKQEIIESSERAAKEKEKEKKE" gene complement(375416..376464) /gene="fbp" /locus_tag="REG_0401" /note="Fructose-1,6-bisphosphatase; similar to COG0158; similar to GI 157368711; EcoGene EG10283" /pseudo gene 376847..378208 /locus_tag="REG_0402" CDS 376847..378208 /locus_tag="REG_0402" /inference="protein motif:PFAM:PF01595,PF03471,PF00571" /note="COG1253; similar to AA sequence EcoGene EG12512; similar to AA sequence GI 22124571" /codon_start=1 /transl_table=11 /product="CorC/HlyC transporter containing CBS domain" /protein_id="EFL92591.1" /db_xref="PFAM:PF00571" /db_xref="PFAM:PF01595" /db_xref="PFAM:PF03471" /translation="MAVSSRGFMLNSILLILFLIAVSAFFSLSEISLAASRKIKLKIM ADEGDVNATHVLKMQATPGTFFTVVQIGLNAVAILAGIVGDAAFSPSFTVFLEEIIPS ISSELAVQISSIFSFVLVTSLFILFADLTPKRIGMIAPEAVAVRVVNPMRFCLMVFRP LVWFFNGMANLIFRIFKLPMVRNDDITSDDIYAVVEAGALAGVLRKQEHELIENVFEM ESRTVPSSMTSRENVIYFDLGESEDKIKEKISVHPHSKFLVCDSNIDKIVGYVDSKDL LNRVLSKQSLVLSSGLQIRAALFIPDTLTLSEALESFKTAGEDFAVIINEYALVVGII TLNDVMTTLMGDLVGQGQEEQIVARDENSWLIEGGTPIDDVMRVLHIDDFPQSGNYET IGGFMMCMLRKIPKRTDFFKHAGYKFEVIDIDSYKIDQLLVTKLTDKSTSMVSISKKE KNL" gene complement(378276..378482) /locus_tag="REG_0403" CDS complement(378276..378482) /locus_tag="REG_0403" /inference="protein motif:PFAM:PF06526" /note="similar to AA sequence EcoGene EG12511; similar to AA sequence GI 77958760" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92592.1" /db_xref="PFAM:PF06526" /translation="MRIFPRYNPIKVAMYVKALFRGRLYIRNMGIFEFDKGKILLPKI RDKRHFVVMSEINRQVQRLQTEIS" gene 378700..378776 /locus_tag="REG_0404" /note="tRNA-Met2" tRNA 378700..378776 /locus_tag="REG_0404" /product="tRNA-Met" gene complement(379030..380601) /locus_tag="REG_0405" CDS complement(379030..380601) /locus_tag="REG_0405" /inference="protein motif:PFAM:PF05378,PF01968,PF01869" /note="COG0145; similar to AA sequence GI 85060111" /codon_start=1 /transl_table=11 /product="predicted hydantoinase/oxoprolinase" /protein_id="EFL92593.1" /db_xref="PFAM:PF01869" /db_xref="PFAM:PF01968" /db_xref="PFAM:PF05378" /translation="MTHRIGIDVGGTNTDAVLLNNDKRVIARTKQSTTGDVITGIEKA IASLLSEADIDKSTITQAMLGTTHCTNAIVERKGLNSVAHFRLAAPATLAILPLTDVP DDFRNHLTTYLFIVEGGFNYNGKILSPLDEEKIRQHLRAVKGKVDVFSVCGVFSPVSN VQELRVAELVHEELGSEIPVSLSHKIGSIGLLERENASILNAVLFSTAQNIANGFSQA LQAHHINAEIFFGQNDGTLMPLKHALSFPILTIASGPTNSIRGASYLTGLKNALIVDV GGTTTDVGVLTNGFPRESLIAAEIGGVRTNFRMPDIASIGLGGGTIVTPLANGAFKIG PESVGYKLVEQALVFGGDIITVTDIAVAKGLLHLGDITLVQHLSAEWVEKVFAHYVTM VEKVIDKMKTNNDPTPVVLVGGGAILLPTTLQGASQVIRPENAGVANAIGISVAQASG DVDILVALDRHNDLNAGLKEAQNQAIAQAIAIGAQPDSIETIELEAIPLAYMPGNTVR IRAKVAGILGATPAQ" gene complement(380604..381713) /locus_tag="REG_0406" CDS complement(380604..381713) /locus_tag="REG_0406" /inference="protein motif:PFAM:PF06032" /note="COG3535; similar to AA sequence GI 85060112" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92594.1" /db_xref="PFAM:PF06032" /translation="MRLLDKTHIHHIAAGASVLGSGGGGDPHIGKIMALNAIKQHGRP IELLDLNVDLDKLHPDALIVATGMIGSPSVMIEKLPNDSESIEACRFMERYLGKKIAA IYPIEVGGANSLLPLATAAHLGVPLIDVDAMGRAFPEFHMTTFYLDGINSSPFVLVDS KANICLIQAQDAYETEKKSRALCIEMGGLALFAAYPITPAVAKASGILATISRAQEIG ETLEKARNEKADIVQVLTNLLKGFVLFRGRANKIDLRVTGGFTCGLACFDGVDTDKGK TFNVSFQNEYLLAQCGDLLLCSTPDLIILLDEDTGVPILAERLRYGSRVVALGVPADK KLCTPQGLKVTGPQYFNYDVNFTSVEELVAANRRE" gene complement(381717..383111) /gene="codB_1" /locus_tag="REG_0407" CDS complement(381717..383111) /gene="codB_1" /locus_tag="REG_0407" /inference="protein motif:PFAM:PF02133" /note="COG1457; similar to AA sequence EcoGene EG11327; similar to AA sequence GI 77734519" /codon_start=1 /transl_table=11 /product="cytosine NCS1 transporter" /protein_id="EFL92595.1" /db_xref="PFAM:PF02133" /translation="MRYLFYSIVILYLMPDDTQSLILDLKKYTMNKNNVTSGEDYAFK PVPLNARSNLFTVTLIRIGIMTALAQFMLGAMLGHAMTFGEALLATFLGSLILEFVSL GLGIAGAREGLSTSLLARWCGFGRLGSVLIGLVIAVSLLGWFGVQNAVFANGLNYAFD GQLGFAWSAAISGMVITVLVAFGFRALSWTAKIAVPLFFFVIAWISLILLEGHNIVAL ITSAPAGTPLTLGAAATAVAGGYIVCALTTADISRYCQNERHVFWMVTWSIIVGEFIV NSIAILIAHALNTDDVVSIMTQTAGVLGLLSVILSAVKINDVNLYSSSLAFANTVEGV TGKKWRHTWLTLGLGIIGTTLSIMGILEEFTRFLIILGVVFPPIAGVMLVDYYILRTS RQLFDAARAEQKLPTEASTPQIGWLAVFACVVGTLAGLGIKFGIPSLNSILVAGLVYG GLAKINPSLRSSRI" gene complement(383197..383961) /locus_tag="REG_0408" CDS complement(383197..383961) /locus_tag="REG_0408" /inference="protein motif:PFAM:PF00196, PF08448" /note="COG2197; similar to AA sequence GI 85060113" /codon_start=1 /transl_table=11 /product="PAS and GerE domain-containing putative transcriptional regulator" /protein_id="EFL92596.1" /db_xref="PFAM:PF00196" /db_xref="PFAM:PF08448" /translation="MDKIKQKDFTDPVKSATSPISQQLLSLCESSTDPWGIKDVDSCY MYGNKAYLELLNLPSNFNIEGRLDREMPHPISEFSSESRQQDRQAQESQKKVSVLDIH PYGREKIIQPYIFDKLPFYDSNGNCIGSIFHAKKLQFYSPMNCVHDQLPSSLLLSSPC KTFSIKELDVIFYALQSFSAKEIARELNLSHRTIENKMQEIYRKATVCSLKGLKDYCR ERELDKYIPPKFLRCGSNTINCVSDYNDSEAESFRL" gene 384285..385529 /gene="gltA" /locus_tag="REG_0409" CDS 384285..385529 /gene="gltA" /locus_tag="REG_0409" /inference="protein motif:PFAM:PF00285" /note="COG0372; similar to AA sequence EcoGene EG10402; similar to AA sequence GI 157369505" /codon_start=1 /transl_table=11 /product="Citrate synthase" /protein_id="EFL92597.1" /db_xref="PFAM:PF00285" /translation="MTVAFDVLHPTQGTDVIDVRALGEKGYFTFDPGFTSTASCESKI TFIDGDEGILLHRGFPIEQLAEKSTYLEVCYILLYGEPPTEEALKTFKTTVTMHTMIH DQIWHLFRGFRRDSHPMAVLCGVTGALAAFYHDALDVNNEQHRETTAFRLLSKMPTVA AMCYKYSIGQPFVYPRNNLSYSANFLHMMFSTPCEEYTVNKVLEQAMDQILILHADHE QNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEACLKMLEEIKTVERIPEFI KRAKDKNDPFRLMGFGHRVYKNYDPRSKVMCEMCHKVLKELNIKDDLLEVAIELEKIA LEDPYFLEKKLYPNVDFYSGIILKAMGIPSSMFTVLFAMARTIGWVAHWKEMHDQGIK IARPRQLYTGYSKRDFTKSVDL" gene complement(385600..387231) /gene="guaA" /locus_tag="REG_0410" CDS complement(385600..387231) /gene="guaA" /locus_tag="REG_0410" /inference="protein motif:PFAM:PF00117" /note="COG0519; similar to AA sequence EcoGene EG10420; similar to AA sequence GI 77957206" /codon_start=1 /transl_table=11 /product="GMP synthase" /protein_id="EFL92598.1" /db_xref="PFAM:PF00117" /translation="MGIFSSRQFYFSFWNTSYMKENIHQHRILILDFGSQYTQLIARR VREIGVYCELWVPDVTEAQIREFKPTGIILSGGPMSTTAEGSPRAPDYVFTANVPVLG VCYGMQTMAMQLGGKVEKAGEGEFGHAQVEIKTQCDLITDIKDACSPDGAALLDVWMS HNDKVTVMPPDFVAIASTHSCPFAIIANEKKRFYGVQFHPEVTHTIQGTALLTRFVKN ICHCEQCWTPSNIIKDTLEQLREKIGEDEVILGLSGGVDSSVTALLLQKAIGDKLTCV FVDNGLLRLNEATEVLKMFRDNLGLKIIHVEAADRFLNELAGVEEPEAKRKIIGRVFV EIFDEEAKKLSNAKWLAQGTIYPDVIESAAAVTGKAHAIKSHHNVGGLPKDMKLGLVE PLKELFKDEVRRIGLALGLPEDMLSRHPFPGPGLGVRVLGEVKKEYCDLLRRADDIFI TALRNANLYQTVSQAFAVFLPIKSVGVMGDGRQYQWVVALRAVETVDFMTARWAHLPY DFLARVSNQIINEIKGISRVVYDISGKPPATIEWE" gene complement(387441..388910) /gene="guaB" /locus_tag="REG_0411" CDS complement(387441..388910) /gene="guaB" /locus_tag="REG_0411" /note="COG0516; similar to AA sequence EcoGene EG10421; similar to AA sequence GI 77974662" /codon_start=1 /transl_table=11 /product="IMP dehydrogenase/GMP reductase" /protein_id="EFL92599.1" /translation="MPMPRIIKEALTFDDVLLIPAHSEVLPNTAKLNTQLTATIQLNI PVLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIKEQADAVLRVKRHESGVVSDPQTV TPNTTLREVKELTARNGFAGYPVVTEDRELVGIITGRDVRFVTDLDQPVSAVMTAKKH LVTVKEGEAPEVVLQKMHEKRIEKALVVSDDFHLQGLITVKDFQKAERKPNACKDQQG RLRVGAAVGAGGNNDQRIDALVAAGIDVLLIDSSHGHSEGVLRRIRDTRAKYPDLQII GGNVATGKGAMALVNAGVNAVKVGIGPGSICTTRIVTGVGVPQLTAIFDTVEALKGTN IPIIADGGIRFSGDIAKAIAAGASCVMVGSMLAGTEESPGEIEFYQGRSFKSYRGMGS LDAMSRGSSDRYFQTDNAADKLVPEGIEGRVAYKGLLKEIVHQQMGGLRSCMGLTGCS TIDELRTNTEFVRISGAGIKESHVHDVIITKESPNYRMG" gene 389337..389942 /locus_tag="REG_0412" CDS 389337..389942 /locus_tag="REG_0412" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92600.1" /translation="MSMINNSLSNTLERMPVTFPTISNSTISPATSTITPLARLAQMY DQPLLVTINTAIPAEISTEDLVEKYDIQTNEVYTQYDRKEQQIVTAWRLLTYLLGSDI SFPAPTEIAELNSASTTQENKLLTLYHSDPTKALIAKVLGCSPNAVNSEVAHAFFGRL AWLDTATIPGNCQCSCRPGCKILGCFFGVWFHLFFSGFLWI" mobile_element complement(389843..391172) /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene complement(389886..391103) /locus_tag="REG_0413" /note="ISRin3 putative transposase, pseudogene; similar to COG2801; similar to GI 224588244" /pseudo gene 391190..391426 /locus_tag="REG_0414" CDS 391190..391426 /locus_tag="REG_0414" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92601.1" /translation="MALAGASNMLSGGASSLQAAFHSAQQQMTPSGSMATSENNAPSN ANSGSGGSNSFSSVMNHAVVEASSKPVKPKETVQ" gene complement(391786..392316) /locus_tag="REG_0415" CDS complement(391786..392316) /locus_tag="REG_0415" /inference="protein motif:PFAM:PF04751" /note="COG3028; similar to AA sequence EcoGene EG11410; similar to AA sequence GI 51597833" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92602.1" /db_xref="PFAM:PF04751" /translation="MTMKRQKNNDNNDDDEIILVSKSEIKRDAEILKELGSELVNLSK NVLERIPLDETLLSAIQLAQKINKGAHRRQIQLIGKLLRSREIEPIQTALDKIKNRHN QQVFLFHKLETLRDDLINKGDEAMPSVLALYPEIDRQQLRNLIRNAQKEKTTNKPAKA SQHIFRYLREQAEKNQ" gene complement(392447..395128) /gene="alaS" /locus_tag="REG_0416" CDS complement(392447..395128) /gene="alaS" /locus_tag="REG_0416" /inference="protein motif:PFAM:PF01411" /note="COG0013; similar to AA sequence EcoGene EG10034; similar to AA sequence GI 123441185" /codon_start=1 /transl_table=11 /product="Alanyl-tRNA synthetase" /protein_id="EFL92603.1" /db_xref="PFAM:PF01411" /translation="MFLSLYSRKIMSKSTAEIRQMFLDFFDSKGHRIVASSSLVPHND PTLLFTNAGMNQFKNVFLGLEQSDSVRATSSQRCIRAGGKHNDLENVGYTARHHTFFE MLGNFSFGDYFKREAIHFAWELLTSEQWFHLPKDKLWITVYQTDEETYRIWADEVGIP AERIIRIGDNKGGAFASDNFWQMGDTGPCGPCTEIFYDHGDHLWGGPPGSPEEEGDRY IEIWNIVFMQFNRQLDGTMLALPQPSVDTGMGLERIAAVLQQVNSNYEIDLFRDLIKA IAEITAVSDLSNQSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAIRHGHML GIKRVFFYKLVAPLISVMGSAAEALKQQQSLIEQWLKTEEEQFTRTLERGLALLDEEL SKITGDTLAGETAFSLYDTYGFPLDLTADVCRERHLKVDEAGFERAMAAQRLRARDSN VFATDYNNLIKVEGKSEFSGYEHQHLQQQALIIALIHNGKAVDEIHFSDKAAPDEEIL VILDKTPFYAESGGQVGDSGKLVNDSAHFTVRDTQKHGATIAHVGQLTTGCLRIGESI NAAVDAERRHRIRLNHSATHLLHAALRQTLGQHVAQKGSLVNDHYLRFDFSHSQAMTK AQIQQVENQVNAEIRANLPIETKIMALEEAKKTGAMAFFGEKYSDKVRVLTIGTFSIE LCGGTHTNRTGDIGLFRITAESATAAGIRRIEAVTGEAAMTLLHQESHLLHKISYQLK GDSSNLLDKISKIQEHNKNLEQELQQLKAQQAKQKSISLSDSAQQIKGGKLLVKQVDN IAPEMLKTLIDSLKQELKSAIIVLATKQDNKVNVIVGVTKNLTDKIKAGELVADLAKQ VGGKGGGRAEMAMGGGTNVATLPAALASVRAWVDARL" gene complement(395350..396525) /gene="recA" /locus_tag="REG_0417" CDS complement(395350..396525) /gene="recA" /locus_tag="REG_0417" /note="COG0468; similar to AA sequence EcoGene EG10823; similar to AA sequence GI 77979733" /codon_start=1 /transl_table=11 /product="RecA/RadA recombinase" /protein_id="EFL92604.1" /translation="MFKLRQNEQRVLLSSTQKAILIHPSNEVKMVTTDENKKKALAAA LTQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSG KTTLTLQVIASAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDNGEQALEIC DALTRSGAVDVIIVDSVAALTPKAEIEGEMGDAHMGLAARMMSKAMRKFAGNLNNANT LLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKNGEEVIGSDTRVK VVKNKIAAPFKQAEFQIHYGEGINLNGELIELGVKHKLIEKAGAWYSYKGNKIGQGKA NASQYLKENEAIKSELDKTLRDMLLGGGSNATDADTAHPAVTESFIAEKNNETSEEF" gene 396984..397337 /gene="lrhA" /locus_tag="REG_0418" CDS 396984..397337 /gene="lrhA" /locus_tag="REG_0418" /inference="protein motif:PFAM:PF00126" /note="C terminal truncation; COG0583; similar to AA sequence EcoGene EG12123; similar to AA sequence GI 77961180" /codon_start=1 /transl_table=11 /product="LysR domain-containing putative transcriptional regulator" /protein_id="EFL92605.1" /db_xref="PFAM:PF00126" /translation="MINSNRPIINLDLELLRTFVAVADRKTFSAAAETICRTQSAVSQ QMQRLEQLVGKELFIRHGCNKLLTEYGFQLLRYARKILDFNDEACQTLIFNHCTSLGI AQKIVSCKSTKLSPW" gene 397629..398741 /locus_tag="REG_0419" CDS 397629..398741 /locus_tag="REG_0419" /inference="protein motif:PFAM:PF00388" /note="similar to AA sequence GI 149910699" /codon_start=1 /transl_table=11 /product="putative phospholipase domain-containing hypothetical protein" /protein_id="EFL92606.1" /db_xref="PFAM:PF00388" /translation="MTGFNLVNDSSRKSILTQNILNQPEGNFSKPGFVNHLTHCDNTP ETMLSGKELKANRIEAITNAQMCGTTPINNIAMLGTHDSGTYAMENLTGISRCQKINL IQQAEQGAQYFDLRVRRNDEGVWKFYHGERGAAFGGFNSSNEAIPEVKALFQYAAAHS ENMFIFKFHFDTEGRFAPDNETTVKNFIDEVSSDYRARLIKKTNENDRLGDLTLDQTL KEKNNIAILANHAGTVPQNNEEIWDYKATTRGGWGKMPRAEQLVKHLEKSLKSDKEEI LVSQTNLPAFLPPSAAIFSNPKALMGLEALAKSLHAKVATAFSKLVKENNFNPGIISM DFIGIDHLSSTALYRELCNFHNRQFVPKISELLMAS" gene 398782..399597 /gene="nuoA" /locus_tag="REG_0420" CDS 398782..399597 /gene="nuoA" /locus_tag="REG_0420" /note="COG0838; similar to AA sequence EcoGene EG12082; similar to AA sequence GI 77976302" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit A" /protein_id="EFL92607.1" /translation="MVCSKSLMFADLAITWVRVQPLQTYLPGKNHLMGYHVSFLEPLL AARFIPFALMVCLRSSVSLFDRLAATSRAVGIYPMNFELRQGGQGDRPMSVDRLRDSA STRRQQSRNLKGEGYKQIESCETMSTTTEVIAHHWAFAVFIISAIGLCGFMLLAAFFL GGKARARAKHIPYESGIDSVGSAQMRLSAKFYLVAMFFVIFDVEALYLYAWSVSIREN GWLGFIEASIFIFVLLAGLVYLVRIGALNWTPPRSDRQVKPSVITGAYSKQKQ" gene 399610..400287 /gene="nuoB" /locus_tag="REG_0421" CDS 399610..400287 /gene="nuoB" /locus_tag="REG_0421" /inference="protein motif:PFAM:PF01058" /note="COG0377; similar to AA sequence EcoGene EG12083; similar to AA sequence GI 22125526" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain B" /protein_id="EFL92608.1" /db_xref="PFAM:PF01058" /translation="MDYTLTRAEPSGENDRYPLQSQETVSGDPLEQHVHRSVYMGKLE NALHDMVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMV VAGTCFTKMAPVIQRLYEQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYI PGCPPRPEAYMQALLLLQKSIDKERRPLSWTVGDQGVYRANMPSERERKRAERIAVTH LRTPDDI" gene 400300..402099 /gene="nuoC" /locus_tag="REG_0422" CDS 400300..402099 /gene="nuoC" /locus_tag="REG_0422" /note="COG0649; similar to AA sequence EcoGene EG12084; similar to AA sequence GI 123441678" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain C,D" /protein_id="EFL92609.1" /translation="MTEPTASGSAQPTYPTSDHSDDPIIELLSLFFGAEAFVLQATRT GMPVLWIKKEKLLDVMLWLKKQPQPYVMLFDLHGVDERQRTYRQDLPAADFSVFYHLL SIERNRDIMLKVALSEKALQLPSVQQIFPNANWYERETWEMFGITFEGHPHLTRIMMP QSWQGHPLRKDYPARATEFDPFILTKQKQDLEMESLTFKPEDWGMKRGRENEDFMFLN LGPNHPSSHGAFRIILQLDGEEIIDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY LGGCVNEMPYVLAVEKLAGIVVPDRVKVIRVMLSELFRINSHLLYISTFIQDVGAMSP VFLAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWQHLLHDFLHWMPKRLDS YVKIALKNSILKGRSIGVASYDASAALEWGVTGAALRATGIAFDVRKWRPYSGYENFD FDVPIGDGNSDCYTRVMLKVEEIRQSLRILQQCYKNMPEGSFKADHPLTTPPPKERTL QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRVRTPSFA HLQQIPSVIRGSLVSDLIVYLGSIDFVMSDVDR" gene 402132..402650 /gene="nuoE" /locus_tag="REG_0423" CDS 402132..402650 /gene="nuoE" /locus_tag="REG_0423" /inference="protein motif:PFAM:PF01257" /note="COG1905; similar to AA sequence EcoGene EG12086; similar to AA sequence GI 22125528" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain E" /protein_id="EFL92610.1" /db_xref="PFAM:PF01257" /translation="MNDQKNHLEGMAITPSDFVLSAEEQAAIEQEKQHYEDARAATIE ALKIVQKKRGWVPDGAIYAIAEILAIPASDVEGVATFYSQIFRRPVGRHVIRYCDSVV CYITGYQEIQTVLEKKLSIKPGQTTTDGRFTLLPTCCLGNCDKGPTMMIDEDTHSYLK PEDIEPLLERYP" gene 402647..404014 /gene="nuoF" /locus_tag="REG_0424" CDS 402647..404014 /gene="nuoF" /locus_tag="REG_0424" /inference="protein motif:PFAM:PF01512" /note="COG1894; similar to AA sequence EcoGene EG11774; similar to AA sequence GI 22125529" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain F" /protein_id="EFL92611.1" /db_xref="PFAM:PF01512" /translation="MNPHLTAATHPLTWRLRADKQPLWLEEYRNKNGYQGAKIALTSM APSEVVDVVKNAGLKGRGGAGFPTGLKWSLMPKDDSINIRYLLCNADEMEPGTYKDRL LMEQLPHLLIEGMLIGAFALKAYRGYIFLRGEYIEAAVRLRQAISEAKGAGLLGKNIL GSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRAKPPFPASSGVWGRPTCVNNV ETLCNVPAILEQGVDWYQGITAGKSNDAGTKLMGFSGRVKNPGVWELPFGITAREILE DYAGGMCDGLKLKAWQPGGAGTDFLTADHLDLPMDFEHIGKAGSRLGTALAMAVDHQI NMVSLTRNLEEFFARESCGWCTPCRDGLPWSVKILQALERGEGQPGDIETLEQLCRLL GPGKTFCAHAPGAVEPLQSAIKYFRDEFAAGIAPKYQGHFDIINRGNAASIKGIQANL LNERW" gene 404030..406762 /gene="nuoG" /locus_tag="REG_0425" CDS 404030..406762 /gene="nuoG" /locus_tag="REG_0425" /inference="protein motif:PFAM:PF00111" /note="COG1034; similar to AA sequence EcoGene EG12087; similar to AA sequence GI 77961186" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain G" /protein_id="EFL92612.1" /db_xref="PFAM:PF00111" /translation="MATIHVDGKKYHVNGANNLLQACLSLGLDIPYFCWHPALGSVGA CRQCAVKQYQNAEDTRGRLVMSCMTPASDGSFISIDDDEAKEFRASVVEWLMTNHPHD CPVCEEGGNCHLQDMTVMTGHNARRYRFTKRTHENQQLGPFIAHEMNRCIACYRCVRY YNDYADGTDFGVYGTHDNVYFGRPESGTLESEFSGNLVEICPTGVFTDKTHSERYNRK WDMQFAPSICQQCSVGCNISPGERYGELRRIENRYNGSINHYFICDRGRFGYGYVNLK NRPRQPQQRQGNDWIKLDTDQAIQQTADLLRQAKKIIGIGSARASLENNFALRELVGA ENFYSGIAQGEQNCLQLMLKVLREGGIHTPSLREMESYDAVLVLGEDLTQTAARIALA VRQAVKGKAREMAAAQKVADWQIAAVLNIGQHAKHPLFITNVDDTRLDDIAAWNYRAP VCEQARLGFAIAQGLDPLAPAVSDLADNLQIKVDIIVQALAGAQKPLIISGSSAGSEA IIAAAANVAKALQSRGSEVGISFVASAANSLGLAMMGGGCLDQALDQLNAERVDTLIV LENDLYRHAVADKVDTALAAVKNVVVLDHQHTAIMDRADVILPATSFAESDGTLVNQE VRAQRFFQVYDPTYYDTADNKRFMQASWRWLHSLAASYHCHPIHWIQLDDVIQACATA LPSLQGILAAAPDATFRIDGQKLARSPQRYSGRTAMRADINVHEPRQPQDLDSPFAFS MEGNNSPYADRQQIPFAWAPGWNSPQAWNKFQAEVGGALRFGDPGVRLIDAAVSNLAY FDQVPAAFHSESHHWIIAPYYHLFGSEEMSQRAEVIQQRMPMPYLILNTDDATQLGLT LGAVIEFICAGQRLRLPLRCSATLAPGQVGLPLGLPGIPPILLGERIYHLQETP" gene 406762..407736 /gene="nuoH" /locus_tag="REG_0426" CDS 406762..407736 /gene="nuoH" /locus_tag="REG_0426" /note="COG1005; blastx intergenic;similar to AA sequence EcoGene EG12088; similar to AA sequence GI 156933128" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit H" /protein_id="EFL92613.1" /translation="MSWLSPDLSEILCSILKAWVILLVIVICGAFMSFGERRLLALFQ NRYGPNRVGWGGSLQLLADMIKMFFKEDWVPHFADRFFFTLAPMIAFTSLLLAFAIVP ISPTWVVADLNIGILFFLMMAGLALYAVLFAGWASNNKYSLLGAMRACAQMLSYEVFI GLSLMGVVAQTGSFNMQDIVNQQQQVWNIIPQFFGFITFAIAGVAVCHRHPFDQPEAE QELADGYHIEYSGMKFGLFFVGEYIAIVTVSALIVTLFFGGWQGAFLPPFVWFALKTA FFMVMFILIRAALPRPRYDQMMSFGWKVCLPLTLLNLLATAAVILCNT" gene 407744..408295 /gene="nuoI" /locus_tag="REG_0427" CDS 407744..408295 /gene="nuoI" /locus_tag="REG_0427" /note="COG1143; similar to AA sequence EcoGene EG12089; similar to AA sequence GI 22125532" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain I" /protein_id="EFL92614.1" /translation="MITMTLKELIIGFGTQIRSLWLMALHAFHPRETKMYPEEPVYLP PRYRGRIVLTRDPDGQERCVACNLCAAVCPVDCISLQKAETKDGRWYPEFFRINFSRC IFCGLCEEACPTLAIQLTPDFEMGEFKRQDLVYEKEDLLISGSGKYPEYNFYRMAGMS IEGKQKGEAEHEAKPIDIKSLMP" gene 408304..408879 /gene="nuoJ" /locus_tag="REG_0428" CDS 408304..408879 /gene="nuoJ" /locus_tag="REG_0428" /note="COG0839; similar to AA sequence EcoGene EG12090; similar to AA sequence GI 157371537" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit J" /protein_id="EFL92615.1" /translation="MMEFVFYTAAVIAVLATLRVISHHNPIHALLYLVVSLLAIAAVF FSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGDSIQQQEKAWLKPSVWIGPGLLSL TLLVVLMMALGSVTAEIRGTMVDAKQVGISLFGPYVLAVELASMLLLAGLVVAFHLGR EDRGGKNNCCIPAASNTAASKAKGITMEKQP" gene 408876..409178 /gene="nuoK" /locus_tag="REG_0429" CDS 408876..409178 /gene="nuoK" /locus_tag="REG_0429" /note="COG0713; similar to AA sequence EcoGene EG12091; similar to AA sequence GI 77957610" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit K" /protein_id="EFL92616.1" /translation="MIPLQHGLILAAILFVLGLTGLLIRRNLLFMLISLEIVINAAAL AFVVAGSYWQQADGQVMYILAISLAAAEASIGLALLLQLYRRHHTLNIDSLSEMRG" gene 409175..411010 /gene="nuoL" /locus_tag="REG_0430" CDS 409175..411010 /gene="nuoL" /locus_tag="REG_0430" /note="COG1009; similar to AA sequence EcoGene EG12092; similar to AA sequence GI 45442145" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit L" /protein_id="EFL92617.1" /translation="MNLLFLIVLLPLLSFLLLSFSAGRFSEKISALIGVGMIGLTALV TLYVAVDFLNQPLSQPEKAFPVFHQTLWHWISVGDFSIPVTLTLDKLSLAMLLVVTVV GFFIHLYASWYMRTEEGYSRFFAYTNLFIASMVILVLADNLLLLYLGWEGVGLCSYLL IGFYYRHSANGAAAMKAFIVTRIGDVFLAVALFILYQALGTLNIDELMRLAPEKWAIG SNVISWVTLLLLVGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIVRT QGLFLMAPEVLQLVGMVGAITLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGIQA WDAAIHHLVIHAFFKALLFLAAGSVIQACHHQQNMFKMGGLGKKIPLVYLCFLIGGAS LAALPFTPGFHSKDDILWHAWERGHITLVIMGLLGAFLTALYTFRMIFIVFHGDINTQ PKRVTGISHSLPLVMLMIFSTFFGVWPEGYFSHFFKTDKTLLEIFSGTLVIMGVLLAA ALYLGKRQLVNRVASSRIGKFFTSWWLHAWGFDWLYDRLFVKPYLWIAKVLQSDPLNS LMNFPVLLALFANRALSISENGSVRWYAASMGLGAVTVLLVLLFV" gene 411102..412643 /gene="nuoM" /locus_tag="REG_0431" CDS 411102..412643 /gene="nuoM" /locus_tag="REG_0431" /note="COG1008; similar to AA sequence EcoGene EG11773; similar to AA sequence GI 77961192" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit M" /protein_id="EFL92618.1" /translation="MLLPWLILIPFIGGLLCWQCERFGTNVPRWIALFAMGLTLALTV YLFLQPTAISVFTEGLTDTADIPQWQAEFTLPWIPSFGIEFHLALDGLSWLMVMLTGL LGLLAILCSWCEIQRNLGFFHLNLLWILGAVIGVFLAMDLFLFFLFWEMMLVPMYFLI ALWGHKASSGQSRITTATKFFIYTQASGLIMLIAIIGLVLVHYQTTEVWTFNYNLLLQ TPMSPQIEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYG LLRFGLPLFPQASHDFSPIAMGFGVIGIFYGAWLAFCQTDIKRLIAYTSVSHMGFVLI AIYSGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERLHTRDIRQMGGLWSRIQYLPA LSLFFAMATLGIPGTGNFVGEFMILCGSFQVAPLITVIATFGLVFASVYSLVMIQRAY YGEAKSPHALPSMTMRELSIILLLVTLLILLGIYPQPILDTSDAVMTKIQQRFAASSI LTTGL" gene 412696..414135 /gene="nuoN" /locus_tag="REG_0432" CDS 412696..414135 /gene="nuoN" /locus_tag="REG_0432" /note="COG1007; similar to AA sequence EcoGene EG12093; similar to AA sequence GI 77957613" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit N" /protein_id="EFL92619.1" /translation="MLPLLIIGLMTVVIMLSIAWRRHHFINATLTVIGLAAALMSLCF AWQMEILQYLPQDVTALVRFDGYSMFYTGLVLIASLATTIFAYPWLVGYPDNREEFYV LLLIATLGGILLVSAHHLASLFLGIELISLPLFGLIGYAYRQPRALEASIKYMLLSAV ASSFLLFGMALLYAESGSLSFSELGNSLNESTVHRPLILAGLGMMLVGLCFKLSLVPF QLWTPDIYQGAPAPVVVFLATASKIALFAVVMRLFLYSSATHDEVMDILLSIMAMGSI LFGNLMALTQSNIKRLLGYSSIAHLGYLLITLMLVNPEPSSSIVGIYLTGYLLSSLGA FGVISLMSSPYQGADAESLFVYRGLFWHKPILAAVMTVMMLSLAGIPLTLGFIGKFLL ITLGVSAQLGWLTGAVVLGSAIGLYYYLRVTVSLFLSPSQKFPRHIPRHWALTAAGMV VLICTLLVLFFGIYPQPLMSLIQFAQPML" mobile_element complement(414160..414643) /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene complement(414200..414631) /locus_tag="REG_0433" /note="ISRin3 putative transposase, pseudogene; N terminal truncation; similar to COG2801; similar to GI 148263606; EcoGene EG40011" /pseudo gene 414900..417020 /locus_tag="REG_0434" CDS 414900..417020 /locus_tag="REG_0434" /inference="protein motif:PFAM:PF05925" /note="similar to AA sequence GI 183597653" /codon_start=1 /transl_table=11 /product="putative T3SS secreted effector protein" /protein_id="EFL92620.1" /db_xref="PFAM:PF05925" /translation="MNILRSFINYIKVGLGVSNRINVYREMKPIANHINRFGLLMGAK NSGLHFTPAQKHELCMLRYNLLPRIHALDKFIDISNEKINFNFDNDIEKHNKHIDIIR EVEKFKENITKELMRITKPTKPPRLSKQAGQDLEKTPVSLPCSQSEHDIMDTVGDMQE LRAFLRENIANLEENIKEKEIVNLKNNYNNSSKASSFLFNKLKKSIDSDRKKIETFNV EIDKLDTKFEVYCNKNEAVLDRIYERKNKCQVGNTIKQLREDLLAVAELVSAERGFSL ESMPKAPNLVGSDEDIESLINFKNNIIDFISMDIFSKEEIKTKPTQGPLAVVNANLEK AKDIYESAFNKIKTDKLNRTNNGKNWETIISPFVHKLNTFISKHIPVQALRLSPTEPT DNTFGQNVGSTATKSKHVTNAWLSEFSVAGKVLSRLFRHGALSASGLKLGSKEREEAN IARGKELLTAMLLADPKKLEIARSGKVAKLRITSTSLMTPANVKVPGFKSRERILLEE QNAVWEYLSSEPEITLTIVDANGQSQDVRVDADIAAFSVGVNPLARGWPKLGQNFSDQ CNEKAALKLLGKLEHPGIGGWVEEYLEGSKITNREKVIKLAIELKMALRNKEYHQSNG DPYRIPALIAILSQEIGLAPPCVNCKSGKDRTAFAVSRIAEWRAKEYMNLQPGEEDSD IRGLLMADPGSGKIQEWNTGHRGE" gene 416977..417594 /locus_tag="REG_0435" CDS 416977..417594 /locus_tag="REG_0435" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92621.1" /translation="MGKFRNGTLVTGGNKAVTKNKFTLRRLAELFIGGEGMREYIGNP NVLDVVVGDAEKASKDKKKKSEPLELNPIPLQGSVVSQRLVASMPSLQELMLRGVSSH YDNSIYESFRGSEYGDGEPGQSSSASSASNSLYESFPGSEDEDGKPGDQKVMSRRGFS NGLGGLTKSPHEGPYYETIPDARPIKGEVVASFVENHYMATPRVH" gene complement(417676..418404) /gene="dnaQ" /locus_tag="REG_0437" CDS complement(417676..418404) /gene="dnaQ" /locus_tag="REG_0437" /note="COG0847; similar to AA sequence EcoGene EG10243; similar to AA sequence GI 77977838" /codon_start=1 /transl_table=11 /product="DNA polymerase III epsilon subunit" /protein_id="EFL92622.1" /translation="MNTATRRQIVLDTETTGLNKVGAHYQGHRVIEIGAVEMVNRRLT GNHFHVYLKPDRLVDPEAYAIHGISDEFLADKPTFADTAKTFLDFIRGADLIIHNASF DIGFLDYEFRLLEQNSAKIETFCTITDSLLLARQLFPGKRNNLNALCDRYHIDNSKRT LHGALLDAEILAEVYLAMTGGQTSLSFSMETDQQQQNNKEEIKPIVRPTSALKIIYAN ADELATHQALLEGMVKKGKCLWQA" gene 418381..418938 /gene="rnhA" /locus_tag="REG_0436" CDS 418381..418938 /gene="rnhA" /locus_tag="REG_0436" /inference="protein motif:PFAM:PF00075" /note="COG0328; similar to AA sequence EcoGene EG10860; similar to AA sequence GI 77977837" /codon_start=1 /transl_table=11 /product="ribonuclease H" /protein_id="EFL92623.1" /db_xref="PFAM:PF00075" /translation="MSSCCRVHCVRLCQNWDFNEESIRMHKQVEIFTDGSCLGNPGPG GYGAILRYKQHEKILSDGYYLTTNNRMELMAAIIALEALTSPCQVRLSSDSQYVRQGI SEWIHNWKKRGWKTTQRTPVKNADLWQRLDGVIQNHQVTWLWVKGHAGHLENERCDQL ARIAANNPSQKDVGYEASSLSDQGA" gene complement(418968..419681) /gene="yafS" /locus_tag="REG_0438" CDS complement(418968..419681) /gene="yafS" /locus_tag="REG_0438" /note="COG0500; similar to AA sequence EcoGene EG13331; similar to AA sequence GI 77973126" /codon_start=1 /transl_table=11 /product="SAM-dependent methyltransferase" /protein_id="EFL92624.1" /translation="MKPAQLYLKTHAPTSWSELPWGEYYRAAIEEAMQPWWSKFFGFH LLKIGHLSAEIASDQCSISHQVSAVEQGYNTQVLASPYQLPFAEKSVDVCLLLHTLAY GTDPHRILREVDRILTDDGWLVTTHFNPLSLLGVGKLLPLLRHREPYVSRMFTRIRIL DWLNLLDYQVMHQSHFHVLPWHKRGGGSAMNTHLTALGCISLTIARKRTLPLTLMPIK FATRKPCFNRAVGVTKNYS" gene 419704..420480 /gene="gloB" /locus_tag="REG_0439" CDS 419704..420480 /gene="gloB" /locus_tag="REG_0439" /inference="protein motif:PFAM:PF00753" /note="COG0491; similar to AA sequence EcoGene EG13330; similar to AA sequence GI 123441270" /codon_start=1 /transl_table=11 /product="putative hydroxyacylglutathione hydrolase" /protein_id="EFL92625.1" /db_xref="PFAM:PF00753" /translation="MVEHRYRMNLISIPALQDNYIWLLIDEQDHCIIVDPGEASPVLA ILNKRHLIVDAILLTHHHQDHLDGVPELLKHFPQIPVYGPRETEKKGATKLIEEGDDL IIGRQNFSVIAVPGHTLGHIAYYNAPYLFCGDTLFSAGCGRLFEGTGDQMYRSLQKIM QLPDDTLICGGHEYTLSNLAFARSILAEDKKIEAYQKKVMQLRAEKQPSLPTTLQWER EINIFLRCDEIELQKRVLGGKSLTSLSLVFSALRMMKDRF" gene 420568..421854 /locus_tag="REG_0440" CDS 420568..421854 /locus_tag="REG_0440" /inference="protein motif:PFAM:PF01464,PF01476,PF06474" /note="COG0741; similar to AA sequence EcoGene EG10246; similar to AA sequence GI 123441269" /codon_start=1 /transl_table=11 /product="lytic murein transglycosylase" /protein_id="EFL92626.1" /db_xref="PFAM:PF01464" /db_xref="PFAM:PF01476" /db_xref="PFAM:PF06474" /translation="MKTKAIFLASVLLVGCQTSKLGTQLPIQHAQSLSSASVENEARK YIDSNQEKLGRLTKGKDSLSQPNLWHFVSSELKMKFQDNSLIREQKIKYLKNKSDLHH VIARANPYMYLIVSEIQRRSMPMELILVPIVESAFDPSATSGAGAAGLWQFVPSTGLH YGLKQNRWYDGRLDIVASTKAALDLMENLNRRFDGDWLLTLAAYNSGAGRVNKAISAN RRQGKSTNFWELSLPRETSIYVPKMLALSHIIKNHKQHNFKLPNTDKRHGLARVDIGR QMKLSRVAEMSGLSLAQLKFYNAGYKLDVTAPNGPHYIVLPEDNARHFKNSLAEAKFM VPQPARLVKNNPNAESVLQYKVRQGDTLSTIAKRFNIDPYDLQNWNNLTTSDFLKVGQ TLKTGSRQVGEDNIPNEFRVTARRPSIESQECTNST" gene 421944..422726 /gene="yafD" /locus_tag="REG_0441" CDS 421944..422726 /gene="yafD" /locus_tag="REG_0441" /inference="protein motif:PFAM:PF03372" /note="COG3021; similar to AA sequence EcoGene EG11650; similar to AA sequence GI 123441268" /codon_start=1 /transl_table=11 /product="Endonuclease/Exonuclease/phosphatase domain-containing hypothetical protein" /protein_id="EFL92627.1" /db_xref="PFAM:PF03372" /translation="MPKRTHAMRYVAGKPVEQIFSSSAYFPRQGLPLCKPLQASKFLR VVVWNIFKQQRVSWLAVLKKFGKDSQLMLLQEARTTPEMVRFATSHYLTTDQVPAFTL PHHPSGVMTLAAAHPIYCCPLREREPLLRLSKSALVTVYPIQDGRSLMVVNIHAVNFS LGVNVYSRQFSSIGAKIALHRGPLILAGDFNAWNRQRVNALRLFTRSMELQEVEFFID NRSRVFGFPLDFIFFRDLYVAEASVLVTRASDHNPLRVDFLL" gene 423080..424622 /locus_tag="REG_0442" /note="16S ribosomal RNA, operon 1" rRNA 423080..424622 /locus_tag="REG_0442" /product="16S ribosomal RNA" gene 424727..424803 /locus_tag="REG_0443" /note="tRNA-Ile2" tRNA 424727..424803 /locus_tag="REG_0443" /product="tRNA-Ile" gene 424895..424970 /locus_tag="REG_0444" /note="tRNA-Ala1" tRNA 424895..424970 /locus_tag="REG_0444" /product="tRNA-Ala" gene 425075..427987 /locus_tag="REG_0445" /note="23S ribosomal RNA, operon 1" rRNA 425075..427987 /locus_tag="REG_0445" /product="23S ribosomal RNA" gene 428057..428176 /locus_tag="REG_0446" /note="5S ribosomal RNA, operon 1" rRNA 428057..428176 /locus_tag="REG_0446" /product="5S ribosomal RNA" gene 428187..428262 /locus_tag="REG_0447" /note="tRNA-Ile1" tRNA 428187..428262 /locus_tag="REG_0447" /product="tRNA-Ile" gene complement(428424..430997) /gene="clpB" /locus_tag="REG_0448" CDS complement(428424..430997) /gene="clpB" /locus_tag="REG_0448" /note="COG0542; similar to AA sequence EcoGene EG10157; similar to AA sequence GI 77976237" /codon_start=1 /transl_table=11 /product="ClpB molecular chaperone" /protein_id="EFL92628.1" /translation="MLLERFTQKFQEALGGAHSLALSRDHQFIEPLHLMSTFLCQEGG TVFPLLTSSGIDAQDLKNKIDQALERLARVEGTADVQVSKKLERTLNLCEKLAQKRGD KFIASELFLLAALEESSTLTDLLKAAGASTDKITKAIEELRSGNTIKSASEENQRQAL KQFTIDLTERAAQGKLDPVIGRDEEIRRTMQMLQRRTKNNPVLIGEPGVGKTAIVEGL ALRIINGEVPEGLKGKRVLSLDIGALLAGAKFRGEFEERLKALLNELEKQKGNVILFI DELHTLVVGAGKSDGAMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ TVYVAEPNVEDAIAILRGLKERYELHHHVQITDPAIVEAVTLSHRYISDRRLPDKAID LIDEAGSSIRMQIDSKPELLDRLYRRIIQLKLEQQALNKESDDASKKRLQELNSELEQ KEREYSTLEEKWKAEKAALKGIQKIKTELEQAKITLEQARRVGDLTKMSELQYGKIPE LEKELDTANQLENETMKLLPNRVTEEEIAKVVARWTGIPVSKMLEGERSKLLRIEQEL HNRVIGQDEAIEAVSNAIRRSRAGLADDNRPTGSFLFLGPTGVGKTELCKALAVFLFN TDKAMIRIDMSEFMEKHAVSRLIGAPPGYVGYEEGGYLTEIVRRRPYSVILFDEVEKA HPDVFNILLQVLDEGRLTDGQGRTVDFRNTVVIMTSNLGSELILEHSTETDFSKIKNK VMENVSNHFRPEFINRIDEIIVFHRLEQHHLISIAKIQLQRLQQRLAGRNYQINATEA VLELLSQRGFDPVYGARPLKRVIQKEIEDPMAQQILANKLKTNMPIVIDTKDGSIVIK Q" gene complement(431275..432543) /gene="glyA" /locus_tag="REG_0449" CDS complement(431275..432543) /gene="glyA" /locus_tag="REG_0449" /inference="protein motif:PFAM:PF00464" /note="COG0112; similar to AA sequence EcoGene EG10408; similar to AA sequence GI 77963401" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="EFL92629.1" /db_xref="PFAM:PF00464" /translation="MSENKNNIAHYDLELWKAMQSEVTRQEEHIELIASENYTSQRVM QAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEELAIKRAKALFGADYANVQPHSGSQAN AAVYMALLQPGDTVLGMDLNHGGHLTHGSPVNFSGRLYNIVSYGVDAAGKIDYDALAE LAKSDKPKMIIGGFSAYSGVVDWARMREIADSIGAYLFVDMAHVAGLVAAKVYPDPLP HAHVVTTTTHKTLAGPRGGLILAKNGDEAFYKKLNSAVFPGSQGGPLMHVIAAKAVAF KEALEPEFETYQQQVVKNAKAMVKVFLDRGYKVVSGGTENHLFLLNLVNKNLTGKDAD AALGRANITVNKNSIPNDPKKPFVTSGIRIGTPAITRRGFKEAESEQLAGWICDILDN INDENLIQKTKNQVVEICQRFPVYSNTTKL" gene complement(432583..432759) /locus_tag="REG_0450" CDS complement(432583..432759) /locus_tag="REG_0450" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92630.1" /translation="MRFSGDLSYTLSIKLYPMNFELRQGGQGDRTMSVDILPDSASTR RQQSLNLKGKGYRV" gene complement(432887..434539) /locus_tag="REG_0451" CDS complement(432887..434539) /locus_tag="REG_0451" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92631.1" /translation="MTYIMISLNKRSHRHPPPFCFQDLLEPGNALNNTPVALPSASAA GSSSQSSLQNTSARESDSSSEKHKESGETLDKYLELNLRDTIELPEHVKKSVDSLPAS DLLKKLPHLQKKREPSQSHTRIFKYIVSSLIHLQRPDAVSDLYLRLEHNIGANFIAKC KKECPWHTFEPLAHPITPKLKDNYHPLIPILADMLSKVTPKFEEEVKKLTLDQLKDAI KYFNEYSKKHFAKRSNKDRYPSRMKYLVGYTMVRHNITACKLQSSVEIQYSTLNGWRT MFLKQKDKNVSSEPHVMGNQLSTLMGVDNPSASSNLEPKTSSSELYQDLRGIGSSDAS SLPVQIQSKEQVIPHGKKRLVPPEFGTGASEINHRSTPCTFTLSSSQEEADGILHQQN VQSSSARKLRRLEPRPSFSQGLLPTGNQYLQATLSLPTTQKIINIKKNLQLSTAHITE VNNPPTTPKNGPLSNKQIENYVKYLDEKFPSSAHHVDDDMREEVIIFKQHCAITQENT VKKWAERIIEHEKISRLFGFFIRSLVGSDNEAISKKINELGI" gene 435079..435228 /locus_tag="REG_0452" CDS 435079..435228 /locus_tag="REG_0452" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92632.1" /translation="MQETLILRTKKTLLAGKFFFVTHFYGVKRWPLLAFFMKFYTGDA TPLTG" gene complement(435268..435582) /locus_tag="REG_0453" CDS complement(435268..435582) /locus_tag="REG_0453" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92633.1" /translation="MAMVVITIQTIKIFFRILPVILLPVPVLASPDWGLSSDWLPNGC TARMVPQPLKFSQILVVRCPEKDTAAQQTTIRTENQNGSPTSSARRKEELQRLRKMTL FL" gene complement(435567..435719) /locus_tag="REG_0454" CDS complement(435567..435719) /locus_tag="REG_0454" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92634.1" /translation="MTFVGPIPVCKQQKIIEQQATSFHGENPSSSMQKHEEEFKAKMR KVWPWW" gene 436110..436307 /locus_tag="REG_0455" CDS 436110..436307 /locus_tag="REG_0455" /inference="protein motif:PFAM:PF04971" /note="similar to AA sequence EcoGene EG13634; similar to AA sequence GI 170080902" /codon_start=1 /transl_table=11 /product="putative phage lysis (holin) protein" /protein_id="EFL92635.1" /db_xref="PFAM:PF04971" /translation="MDKLTTGAAYAACAGSIFNGLLSSDSSAQWNAIGVLAGVLLAVL TYLTNLYFKIKEDRRKSRAGK" gene 436304..436824 /locus_tag="REG_0456" /note="putative phage lysozyme; similar to COG3772; similar to GI 85059659; EcoGene EG13829" /pseudo mobile_element 436850..437565 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene 436919..437305 /locus_tag="REG_0457" /note="ISRin3 putative transposase, pseudogene; similar to GI 121604644" /pseudo gene 437566..438685 /locus_tag="REG_0458" /note="phage terminase large subunit; similar to GI 168465704" /pseudo gene complement(438701..439000) /locus_tag="REG_0459" CDS complement(438701..439000) /locus_tag="REG_0459" /note="COG2944; similar to AA sequence EcoGene EG12624; similar to AA sequence GI 37526428" /codon_start=1 /transl_table=11 /product="Cro/CI family phage transcriptional regulator" /protein_id="EFL92636.1" /translation="MVMMDKKLFSRLTDSMKQMNDIIDGDASPSRETIVSNVKVKTIR QTTGLTQIGFARLLAVNVGTLRNWEQGRREPTGPAKALLRAINNDPTHVLKALSA" gene complement(438994..439305) /locus_tag="REG_0460" CDS complement(438994..439305) /locus_tag="REG_0460" /note="COG2026; similar to AA sequence GI 37526429" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92637.1" /translation="MIFIETAIFTEDCRALLSDDEYRALQQALADNPEVADVIAQTGG LRKVRWAAKGKGKRSGVRIIYYHKAAVSHIRLLLIYKKGIKDDLSADEKKVLRMLNER W" gene 439319..440698 /locus_tag="REG_0461" CDS 439319..440698 /locus_tag="REG_0461" /note="similar to AA sequence GI 157146112" /codon_start=1 /transl_table=11 /product="hypothetical phage protein" /protein_id="EFL92638.1" /translation="MLYIKHSVQITITTSRVIDFSRSIIMPDISTPHLDYSKLTEAWD INDALMGGTLFLRQQGERYLPRWPHEDKHRYQQRLSVATLLPAYEETLKNNLGRVFSE PTQLSETTPAVIVDYCHNMDLQGNRLDVWAQAYFSLALQYGVAHALVDYPRVEALKTR AEEKACGARPYAVLINPRQVIGWQSRHSGGQCQLTELRIKEQIVVETAPYHPQKIEQI RKLTPGRVELYRKMTQADGVERWRLHDSWVTSCPVIPLVTLYSKRTGFMCGAPPLLNL ALLNIKHWQSQSEQDNILHVARVPILNVFGLEEGETLAIGAASALHFTDRTRQGNAYT EHSGAAVGAGKAALSDLVEQMRQAGGKLLRCQNSSTKTIDQVSEERLQAHSPLYTLSN SLEDALDNILQLMADWVGEKDGGKVDIRTELETAQQSVNAPAALAIQKPCGKGVIFVR WMRYALYSR" gene 440867..441415 /locus_tag="REG_0462" CDS 440867..441415 /locus_tag="REG_0462" /note="C terminal truncation; similar to AA sequence GI 123442570" /codon_start=1 /transl_table=11 /product="hypothetical phage protein" /protein_id="EFL92639.1" /translation="MSTVNQRLRDEALAHSLFQSRYARGVARKIVAILNKSDAELIAR LRVALDKVNPHYIEVKQLAHLLASVQAVNQQAMTAMFVSLSEELLAFAEHETGYHYRL FDSLLPDVVLARYPLAIITPEQVYAAAMAQPFQGRLLHDWVSHLATDRVSRINHAVKH GSLLGDSVEHITRKVRGSRAKH" mobile_element 441410..442328 /mobile_element_type="insertion sequence:ISRin1" gene 441479..441916 /locus_tag="REG_0463" CDS 441479..441916 /locus_tag="REG_0463" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92640.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 441925..442302 /locus_tag="REG_0464" CDS 441925..442302 /locus_tag="REG_0464" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92641.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" mobile_element 442325..442506 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene 442326..442466 /locus_tag="REG_0465" /note="ISRin3 putative transposase, pseudogene" /pseudo gene 442494..448462 /locus_tag="REG_0466" /note="putative large, repetitive, inner membrane protein; similar to GI 224586029" /pseudo gene 448437..449954 /locus_tag="REG_0467" CDS 448437..449954 /locus_tag="REG_0467" /note="COG2274; similar to AA sequence GI 168231264" /codon_start=1 /transl_table=11 /product="putative type-1 secretion protein" /protein_id="EFL92642.1" /translation="MMIMTMSGEHEMETKHESYYLSADEALSFVAKSININIDINKNE IDSLFKQYDRNNLNDTIKMKNFFLSLGLVLQEVHFHSSEDLLNEALPIILLTAEMHWM VCVGGGNKLKLITAEGHFCEVEMSAESLALLSAFRLQPLQKVVDGIRVANILKQALSA NKIFYTKYFFSSFFMALFALTIPIFSNLYYDKLVPSASTSSLFGIVFIAALFIIFEFI LRSSKDIYQSITSIKDDVDIDISFLEAVIYNKKKNGRSMSSAFVLWNEFQKIKPALLN TIFQRLADIPLFFIFIVVIYVNLGWVVVIPIFMFFFSLAMALINYHYTYSLMNKQKEG QKNRNVFMTEIFYSIKMIHTLNNKNLLLDWVNSSNEQSYLNLKIRKFTLFYQSLLASL SSVSHISIMVIAFFMVINGSVTTGAIVSSVIVSGRISGIISNFSATVVSLLSAEKTAK DLIAFFEDEKKESQPTLQSIASCTGHIALMGVSYQYNPQSPVVISNLWLMRYKLI" mobile_element complement(449926..450828) /mobile_element_type="insertion sequence:ISRin2" gene complement(449964..450395) /locus_tag="REG_0468" CDS complement(449964..450395) /locus_tag="REG_0468" /note="COG3335; similar to AA sequence GI 30249527" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfB" /protein_id="EFL92643.1" /translation="MDESGFAHDMPRLYGYSVKGKRCYGQHDCHAKARTNVIGAQLNG KLTTVCTFDCHINSDIFYAWVTQDLLPKSPPGAVLVMDNVRFHKRQDIQTAIQKAGFI LEYLPTYSPDMNPIEHKWAQAKALRRKRLCDIDTLFSDPFF" gene complement(450410..450763) /locus_tag="REG_0469" CDS complement(450410..450763) /locus_tag="REG_0469" /note="similar to AA sequence GI 30249526" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfA" /protein_id="EFL92644.1" /translation="MTYPLKFRQHVLAFKKKEALTYAETADRFGVGSASLMRWAKRLE PCLTRNKPATKINRAALILDVETYPDASQHERAPRMGVSARGICDALKRAGFSYKKNI LSPQSRRPSSKRFSD" gene complement(451240..451626) /gene="traM" /locus_tag="REG_0470" CDS complement(451240..451626) /gene="traM" /locus_tag="REG_0470" /note="similar to AA sequence GI 152973559" /codon_start=1 /transl_table=11 /product="TraM conjugal transfer protein" /protein_id="EFL92645.1" /translation="MPKIQVFVSKAILENINTIVIDKRNDGAKEHEANTSNTASMLIE LGLKVYELQQKKTDSNFNQTEFNKVILENVVKTSFICQKLLGINSFMSEIQDNEKLDY KLMAYAVRNDTAEVINEFFPKNEENT" gene complement(452145..452453) /locus_tag="REG_0471" CDS complement(452145..452453) /locus_tag="REG_0471" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92646.1" /translation="MFGYKGGTLMKTTLTLEKRGLCAMSLRDLEHKLVCYFNTLPLHQ YAGIDHAFCEEALEVLLNLLDQVEATLPEPLMIENAGCQFSQPQNNDDIACFRSTLFC " gene complement(453311..453997) /locus_tag="REG_0472" CDS complement(453311..453997) /locus_tag="REG_0472" /inference="protein motif:PFAM:PF08448,PF00196" /note="COG2202; similar to AA sequence GI 85060113" /codon_start=1 /transl_table=11 /product="PAS and GerE domain-containing putative transcriptional regulator" /protein_id="EFL92647.1" /db_xref="PFAM:PF00196" /db_xref="PFAM:PF08448" /translation="MVTTDLSGGVSNVLTVALDKFPEPYGIKDLESRIVYANPALIAL FGVKSVSDVVGKFDHEIKSKLVQFDNAAEEFQKQDKQVIDTKCSLVTLEIHPKAIDHP FIVRKVPLLNNEGECIGIIGHNRDLEICTLNDYVRGSMPGSLLLNRPDDTFSERECEI IFFRLQGLKSRVIGNIMYLSCRTIENSLQRMYNKAGVNHIDDFRAFCEEKNYHRYLPR RFINRVCCKF" mobile_element complement(454267..455186) /mobile_element_type="insertion sequence:ISRin1" gene complement(454293..454670) /locus_tag="REG_0473" CDS complement(454293..454670) /locus_tag="REG_0473" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92648.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(454679..455116) /locus_tag="REG_0474" CDS complement(454679..455116) /locus_tag="REG_0474" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92649.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 455846..456109 /locus_tag="REG_0475" CDS 455846..456109 /locus_tag="REG_0475" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92650.1" /translation="MKKINIFLKNHPSYLFPILLFSCSTLAYQKNEQICQFQWGRLFL IETCTKKNSDEQQILPSPAQYQTSEYTPQGRRMGKLRPLPPNL" gene 456350..457270 /gene="lpxC" /locus_tag="REG_0476" CDS 456350..457270 /gene="lpxC" /locus_tag="REG_0476" /inference="protein motif:PFAM:PF03331" /note="COG0774; similar to AA sequence EcoGene EG10265; similar to AA sequence GI 77976094" /codon_start=1 /transl_table=11 /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase" /protein_id="EFL92651.1" /db_xref="PFAM:PF03331" /translation="MIKQRTLKRIVQTTGVGLHTGKKVTLTMRPAAANTGIIYRRTDL TPAVDFQADARSVRDTLLCTCLVNEHNVRISTVEHLNAALAGLGIDNIIIEVDAPEVP IMDGSASPFVFLLLDSGIKELNTAKKFLRLKETVRVEEGDKWAELSPFNGFHLDFTID FNHPAIDASTQSYTLDFSADSFVQQISRARTFGFMRNIEHLQSRGLCLGGSFDCAIVV DDYRVLNEDGLRFGDEFVRHKMLDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVL AKQQAYEYVTFQDKAELPLAFEMPSTLLAC" gene complement(457610..458152) /locus_tag="REG_0477" CDS complement(457610..458152) /locus_tag="REG_0477" /note="COG4701; similar to AA sequence EcoGene EG11088; similar to AA sequence GI 77976093" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92652.1" /translation="MRRSCPQLLNILLDDAMTARKELSYNFQHENSGSYFLHIDNVQQ HAIALLKLNQQVKELLPSQLQPWCRIANYRRNILVLEIANANWMMALRYEQSNLLSAL RKKILPSLASIDIRINPGLMARGDEIVRESAKFAASTEKSVPLRRLSIKSAEELKRLA KCCPKKLRSALERLAALAKN" gene 458638..461388 /gene="secA" /locus_tag="REG_0478" CDS 458638..461388 /gene="secA" /locus_tag="REG_0478" /note="COG0653; similar to AA sequence EcoGene EG10936; similar to AA sequence GI 77976091" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecA" /protein_id="EFL92653.1" /translation="MLTKLLTKIFGCRNDRTLSHMRKKVFLINQMESEIEKLSDSQLR AKTDKFRDQLAQNETLENLICEAFAVVREASKRVFGMRHFDVQLIGGMVLNKRCIAEM RTGEGKTLTATLPAYLNALSGRGVHIVTVNDYLAQRDAENNRPLFEFLGMSVGVNMSG MDAASKRAAYAADITYGTNNEYGFDYLRDNMAFSREERVQRELHYALIDEVDSILIDE ARTPLIISGPAEDSSDMYLKINTLIPKLIRQEKEDSETFQGEGHFSVDEKARQVHLTE RGLMLIEQMLIEANIMQEGESLYSSSNIMLMHHVTAALRAHVLFVRNVDYVVDKGEVN IVDEHTGRTMPGRRWSDGLHQAIEAKEGVEIQNENQTLAAITFQNYFRLYEKLAGMTG TADTEAFEFQSIYKLDTIVVPTNRLMVRKDLPDLIYMSEQEKINAIIEDIRERTANQQ PILVGTISIEKSEIISDHLKKAGIAHQVLNAKFHAKEAEIIAHAGRPGAVTIATNMAG RGTDIVLGGSWQSEIALLDNPSQDQIDAIKTAWQIRHDAVLKSGGLHIIGTERHESRR IDNQLRGRAGRQGDAGSSRFYLSMEDSLMRIFASDRVSGMMRKLGMKPDEAIEHPWVT KAIANAQRKVESRNFDMRKQLLEYDDVANDQRRAIYNQRNELLNVPDVSETINSIRED VFKRTIDNFIPPQSLEEMWDVKGLEQRLKNDFDLDISISQWLPDEKQAKTAPFDEETI RQNILQQAIKVYQHKEDIIGKEMMRNIEKSIMLQTLDSLWKEHLAEMDYLRQGIHLRG YAQKDPKQEYKHESFAMFSSMLELLKYEVMTILSKLQVQQPKEIEALELQRREEAARL EIQQKFSYKNNFQNDKSLLQKTTEVPSSINTENKVSRNDPCPCGSNKKYKQCHGRLYN GR" gene 461410..461814 /gene="mutT" /locus_tag="REG_0479" CDS 461410..461814 /gene="mutT" /locus_tag="REG_0479" /inference="protein motif:PFAM:PF00293" /note="COG0494; similar to AA sequence EcoGene EG10626; similar to AA sequence GI 22127490" /codon_start=1 /transl_table=11 /product="nucleoside triphosphate pyrophosphohydrolase" /protein_id="EFL92654.1" /db_xref="PFAM:PF00293" /translation="MQSLQVSVGIIRNAQHKILITQRAVDSHMAGFWEFPGGKIEPGE TPQSALKRELLEEIGIIIEQMSLFKVLEHRFSDRIVTLHFYLVEQWQGKPFGREGQPM RWVCQHELQASEFPLANLEIIHMLTNAAPFLS" gene complement(461826..462704) /gene="murI" /locus_tag="REG_0480" CDS complement(461826..462704) /gene="murI" /locus_tag="REG_0480" /inference="protein motif:PFAM:PF01177" /note="COG0796; similar to AA sequence EcoGene EG11204; similar to AA sequence GI 77973007" /codon_start=1 /transl_table=11 /product="glutamate racemase" /protein_id="EFL92655.1" /db_xref="PFAM:PF01177" /translation="MRRFMSIRFDEVNTISLQARNAKVDQRFRPTVLIFDSGVGGLSI YQEIRQLLPNIHYIYAFDNQAFPYGEKTEAFIVERVLKIVTRVQQQHPLTLVVIACNT ASTVSLPTLRKYFFFPIVGVVPAIKPAVQLTRNKRIGLLATRATIHCTYIQDLIECFA ADCQIERLWSSELVTLAEKKLHGGSVSVEALRKILTPWLNMDSPPDTVVLGCTHFPLL AEELAKILPYNTQMVDSGAAIAHRVVWLLSLQQKAVSTTARNIAYCTQKNANTALLLP VLQQYGFSTMEELAII" gene 462964..464391 /gene="sbcB" /locus_tag="REG_0481" CDS 462964..464391 /gene="sbcB" /locus_tag="REG_0481" /inference="protein motif:PFAM:PF00929" /note="COG2925; similar to AA sequence EcoGene EG10926; similar to AA sequence GI 153949389" /codon_start=1 /transl_table=11 /product="exonuclease I" /protein_id="EFL92656.1" /db_xref="PFAM:PF00929" /translation="MLEQCKKSTFYVHDYETFGQNPALDRPVQFAGVRTDDDFNIIDD PLVIYCAPANDYLPQPEAVLITGITPQYALKHGVNEAEFCQKIHQQFSVAGTCTLGYN NIRFDDEVSRNIFYRNFYDPYAYNWQNGNSRWDLLDVVRACYALRPEGINWPKNADGL PSFKLEHLAKANGIQHLKAHDAMSDVYATIELAKLVKQAQPRLFKYFYHHRSKHKIKA LIDIENMTPLVHVSGMFGVRRSNISLVAPLAWHPENKNAVIVCDLAADISPLSLDVNT LREHLYTPKDPLNPQQITIPLKLVHINKCPILAPVNTWREKETKRLKIDLQYCLNQLE SLRQNPQIKEKVNALFKQMTARPKVNNVDAQLYCGFFNDTDHNTIKKIQQTSPQNLPA LNFCFQDPRLETLLFRFRARNYHNTLDDTEQRRLLEYRKEVLSPEKIKEYILQLNQLC YQYQNNEEKSSLLKSLLDYVCRLAG" gene 464673..465515 /gene="glpF" /locus_tag="REG_0482" CDS 464673..465515 /gene="glpF" /locus_tag="REG_0482" /note="major intrinsic protein family; COG0580; similar to AA sequence EcoGene EG10396; similar to AA sequence GI 77961043" /codon_start=1 /transl_table=11 /product="glycerol uptake facilitator" /protein_id="EFL92657.1" /translation="MKKITHPPQKKPPLNHYTLKDQCIAEFIGTGLLMFFGVGCVAAL KLTGAGFGQWEISLIWGMGVAMAVYLTAAISGAHLNPAVTITFWLFSSFNIRKVMPYI LAQMLGAFCGAALIYGLYHNLFIDFEQNHHMTRGAANSLELAGVFSTYPHQNISVYQA FIVETVITAILMCLILALTDDGHGIPRGPLAPLLIGILIAVIGASIGPLTGFALNPAR DFGAKIFAYLAGWGTIAFTGGRDIPYFIIPIFAPIIGALLGAFSYRMLIGRRMADIFH IKKT" gene 465533..467077 /gene="glpK" /locus_tag="REG_0483" CDS 465533..467077 /gene="glpK" /locus_tag="REG_0483" /inference="protein motif:PFAM:PF00370" /note="COG0554; similar to AA sequence EcoGene EG10398; similar to AA sequence GI 123440499" /codon_start=1 /transl_table=11 /product="glycerol kinase" /protein_id="EFL92658.1" /db_xref="PFAM:PF00370" /translation="MIMTTTTASEKKYIVALDQGTTSSRAIVLDKHANIIAIAQHAIK QIYPKPGWVEHDPMDIWAAQSSTLIEVLAKADINYNDVAGIGITNQRETTIVWDKNTG RPIYNAIVWQCRRTADSCEKIKKDGKEEFIRQKTGLMVDPYFSGTKLQWILDNVDGAR ERAKKGELLFGTVDTWLIWKMTNRQVHVTDYTNASRTMLFDIHKKAWDPELLKIFDVP ETMLPEVKSSSQIYGKTNIGGEGKIRISIAGIAGDQQAALFGQHCVKSGMAKNTYGTG CFLLMHTGDKAIESKHNLLTTIACSPKGEVNYALEGSVFIGGACIQWLRDELRFFSDS SDSEYLTSKISDSNGVYVVPAFTGLGAPYWDPYARGAIFGITREINRNHITRASLEAI AYQTRDILEAMQNDSGISLESLRVDGGAVTNNFLMQFQANILNINVQRPTINESSALG AAFLAGLATGFWKDVKDLKGKDTTTENATPPKTFIPYMEQTERDRLYDGWKKAVARAQ AWEEHD" gene complement(467138..468316) /gene="emrD" /locus_tag="REG_0484" CDS complement(467138..468316) /gene="emrD" /locus_tag="REG_0484" /note="COG0477; similar to AA sequence EcoGene EG11693; similar to AA sequence GI 123440497" /codon_start=1 /transl_table=11 /product="multidrug resistance protein D" /protein_id="EFL92659.1" /translation="MRKIENFHLLVILIMLIAVGQMAQTIYVPVIAEIAHDFAVPTGS VQRVMSAYLLTYGGSQLIYGPLSDRIGRRPVILTGLLIFIFGALSALLADSLTLLVLA SALQGTGTGVVGVMARTMPRDLYSGTALRYANSLLNMGILVSPLLAPLIGGMLGSYFG WRACHAFLLLLCSLVTYCIFRYLPETRPEQTESQPMFASFYHLLSNTLFSRYLIMLIG ALAGIAVFEASVGVLMRDVLKLNSLTVSILFILPIPAAFLGAWYAGRDNQPFYNLMWY AVMSCLLAGLMMWIPSWFGFMNVWTLLLPAALFFFGAGMLFPLATTGAMEPFPYLAGA SGALVGGLQNMGSGLATGLSAILPQTGQFSLGLLMFTMATLIFLCWWSLSKSLFKISN " gene complement(468474..468680) /gene="sirA" /locus_tag="REG_0486" CDS complement(468474..468680) /gene="sirA" /locus_tag="REG_0486" /inference="protein motif:PFAM:PF01206" /note="COG0425; similar to AA sequence EcoGene EG12216; similar to AA sequence GI 108806199" /codon_start=1 /transl_table=11 /product="cell developmental protein SirA" /protein_id="EFL92660.1" /db_xref="PFAM:PF01206" /translation="MRCPEPVMMVRKAVRHMDKGQTLLIIADDPTTARDIPAFCRFMD HQLLAQNVKQTPYQYLIRKGMDID" gene 468658..469464 /locus_tag="REG_0485" CDS 468658..469464 /locus_tag="REG_0485" /note="COG1738; similar to AA sequence EcoGene EG12217; similar to AA sequence GI 21957097" /codon_start=1 /transl_table=11 /product="conserved inner membrane protein" /protein_id="EFL92661.1" /translation="MTGSGQRIPETLMVMSGLAKGALIFVLCIIKAHYMYSLTYQQQM SALLWLVLFHIVIITSSNYLVRLPLSIFGFHTTWGAFTFPFIFLATDLTVRIFGARLA RKIILLAMLPALLISYMLAVLFYQGNWQGLSALNNFNLIAARIAIASFMAYILGQFLD VQVFNRLRQYRTWWIAPTAAMFFGNISDTFTFFFIAFYKSSDLFMATHWIEIALVDYS FKLFVCLLFFLPIYGAMLTVLLKYFSGQTDHQLSLAASRAHLSIFSRTKL" gene 469742..470508 /gene="glpT-1" /locus_tag="REG_0487" /note="sugar phosphate permease; interrupted by IS element; similar to COG2271; similar to GI 77957877; EcoGene EG10401" /pseudo mobile_element 470436..471354 /mobile_element_type="insertion sequence:ISRin1" gene 470505..470942 /locus_tag="REG_0488" CDS 470505..470942 /locus_tag="REG_0488" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92662.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 470951..471328 /locus_tag="REG_0489" CDS 470951..471328 /locus_tag="REG_0489" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92663.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 471393..472010 /gene="glpT-2" /locus_tag="REG_0490" /note="sugar phosphate permease; interrupted by IS element; similar to COG2271; similar to GI 77957877; EcoGene EG10401" /pseudo gene 472246..473336 /gene="glpQ" /locus_tag="REG_0491" /note="glycerophosphoryl diester phosphodiesterase; similar to COG0584; similar to GI 77973646; EcoGene EG10399" /pseudo gene complement(473410..474771) /gene="sdaC" /locus_tag="REG_0492" CDS complement(473410..474771) /gene="sdaC" /locus_tag="REG_0492" /note="COG0814; similar to AA sequence EcoGene EG12142; similar to AA sequence GI 77976861" /codon_start=1 /transl_table=11 /product="putative serine transport protein (HAAAP family)" /protein_id="EFL92664.1" /translation="MSNLNLNFNLRCLNRRYFMGTTQSGVIASAKANSASRWQTSDTM WVLSLYGTAIGAGVLFLPINAGVGGVLPLIIMAIIAFPMTFFAHRGLCRFVLSGKNPG EDITEVVEEHFGIGVGKLITLLYFFAIYPILLVYGVAMTNTVDSFIVHQMGLPSPPRA LLSLLLIIGMIGIVRFGEGFILKAMSALVFPFIAILMLLALYLIPNWSGAIFQHTSMP ESGSGILMTLWLALPVMVFAFNHSPIISAFAVAKRTECGHDAEKKCSRILAYSHVMMV LTVMFFVFSCVLSLSPAELMEAKLQNITILSYLANHLNTPIIAYVAPIIAFVAISTSF FGHYLGARESFNGIIIKSLRSKGKRINADKLNRITALFILITCWAVATLNPSILGMIE NLGGPIIAMLLFIMPMYAIHKVPAMRKYSGHISNLFVVIIGLTAISAILYSLWTAISS LLG" gene complement(475625..476305) /gene="ybjG" /locus_tag="REG_0493" CDS complement(475625..476305) /gene="ybjG" /locus_tag="REG_0493" /note="COG0671; similar to AA sequence EcoGene EG13676; similar to AA sequence GI 157369877" /codon_start=1 /transl_table=11 /product="putative undecaprenyl-diphosphatase" /protein_id="EFL92665.1" /translation="MLANTSSKKISHRLLNFIDFVNSLTMEQLNHFFFTIINATPSSS VVMIMFASMVAKYVIFIIPLLLVGLWLWGPSDRIVLLRQLLVKTAIALIFALCVAYLI GHLFPSDRPFVENFGYTFLFHAPNNAFPSNHGSAIFTFALAFLFWHRLWSGISLMIVA LTIAWSRIYLGLHWPLDMLGAFFVGLISCFLSQHGWCLWGNSIMRKLLRFYRYCFASL IRKGWVNN" gene complement(476511..478217) /gene="ybjL" /locus_tag="REG_0494" CDS complement(476511..478217) /gene="ybjL" /locus_tag="REG_0494" /note="putative permease; COG2985; similar to AA sequence EcoGene EG13681; similar to AA sequence GI 77976856" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92666.1" /translation="MSPVNINIVHLLNGNYILLLFVLLALGLCLGKVRFGSIQLGSSI GVLVVSLLLGQQHFTMNTEAFNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLILATVM VSSAMILALGLGKLFDWGIGLTAGILAGSMTSTPIFVGAGDALHHSISSVSLLQHAQD NLSLGYAVTYLIGLVSLIFGARYLPKLQHQDLSTSAQQIARERGLDTDSQRKVYLPVI RAYRVGSELVAWADGKNLRELGIYRQTGCYIERIRRNGILANPDGDAILQLGDEISLV GYPDAHSCLDPSFRNGKEVFDRDLLDLRIVTEEIVVKNSNTVGKRLGHLKLTDHGCFL NRVIRSQIEMPIDDNIVLNKGDILQVSGDARRVKSIAEKIGFIAIHSQITDLLAFCVF FILGLMIGLITFQFSSFNFGIGNAAGLLLSGIMLGFLRANHPTFGYIPQGALNMVKEF GLMVFMAGVGLSAGGGISSNFGTIGIQILFSALIVSLVPVVICFLFGAYILRMNRALL FGAIMGARTCAPAMDIISDTARSNIPALGYAGTYAIANVLLTLAGSMIVILWPCLAGI IA" gene complement(478475..479848) /gene="mnmE" /locus_tag="REG_0495" CDS complement(478475..479848) /gene="mnmE" /locus_tag="REG_0495" /inference="protein motif:PFAM:PF10396" /note="COG0486; similar to AA sequence EcoGene EG10997; similar to AA sequence GI 77973775" /codon_start=1 /transl_table=11 /product="putative GTPase" /protein_id="EFL92667.1" /db_xref="PFAM:PF10396" /translation="MKNNKENDTIVAQATPPGRGGVGILRISGALASAVAQAILNKLP PPRYAHYLKFYDEDSNSILDQGIALYFQGPHSFTGEDILELQGHGGPIVLDLLLKRIL ALPLPGLRIARPGEFLERAFLNNKIDLTQAEAVADLINANSEQAARSAVNSLQGVFSD RIKAFSQNLIDLRAYVEAAMDFSEEEINFLSDGKIEGQLNNIINELKKVQAAAHQGSL LREGMKVVIAGRPNAGKSSLLNALAGKESAIVTAVAGTTRDVLREYIHIDGMPLHIID TAGLRETSEIIEKIGIERAWHEIENADSLLFIVDSSSTEATLPDPELIARLPTTLPII VVRNKIDMTDEQCGLTEVKGYPVIRLSAKTGQGIENLQQYLKKSMGFTQHPEGHFLAR RRHLDALEKALKHLNNGHEQLVIMQAGELLAEELRLAQSALEEITGEFSSDDLLGEIF SNFCIGK" gene complement(479865..480785) /gene="rdgC" /locus_tag="REG_0496" CDS complement(479865..480785) /gene="rdgC" /locus_tag="REG_0496" /inference="protein motif:PFAM:PF04381" /note="COG2974; similar to AA sequence EcoGene EG12158; similar to AA sequence GI 162419055" /codon_start=1 /transl_table=11 /product="DNA recombination-dependent growth factor C" /protein_id="EFL92668.1" /db_xref="PFAM:PF04381" /translation="MLWLNNLMIYRLSKNTLPSAEKIEEKLSQFIFSPCPRQNISTMG WVSPMGSQSDALIHNINNQIILCIRKEEKILPTAVIKQELQTQVDRLEREQHRKLKNT DKKALKDDIVASLATRAFSRFSQTLLWIDHINNFIMIDVASAKQAEDALALLRKSLGS LPVVPLRLETPIEFTLTQWIKSGDLPNDFTLMNEAELKAVQEDEGVIRCKQQDLVSDE IASHIEAGKQVTKLALDWRGSLQFVLNNDASLKRLKFADTLRKQNDNIDREDFAQRFD ADFILMTGELSCLISKIIDDLGGEAHSIKS" gene 481263..482015 /locus_tag="REG_0497" CDS 481263..482015 /locus_tag="REG_0497" /inference="protein motif:PFAM:PF08448,PF00196" /note="similar to AA sequence GI 85060113" /codon_start=1 /transl_table=11 /product="PAS and GerE domain-containing putative transcriptional regulator" /protein_id="EFL92669.1" /db_xref="PFAM:PF00196" /db_xref="PFAM:PF08448" /translation="MAEIKQPSPVHGTQCISTQLSRQIISLCDNSSEPWAIKNYESRY LYANAEYIELLNLPTEFNITNQLDSDIPHPSSKSASYFHKYDREVQASEKNVFSLNIY PFGSKEIIQPYICKKAPFYDEKGNCMGIILHTKKLQVFSAIQYLNKASLNAGVDQNIK IQKKKNFFTDKELEVIFFLMQSIKCKLIAEILGLSCRTIENKLQSMYKKANVCCLDDF KAFCIKNGFDKYNKPISKILPHDITTSTLLHP" gene complement(482055..483665) /gene="pck" /locus_tag="REG_0498" CDS complement(482055..483665) /gene="pck" /locus_tag="REG_0498" /inference="protein motif:PFAM:PF01293" /note="COG1866; similar to AA sequence EcoGene EG10688; similar to AA sequence GI 77976428" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxykinase" /protein_id="EFL92670.1" /db_xref="PFAM:PF01293" /translation="MKFEQQFAVYGIKNVSEVIYNPSYECLFKEETKPELERYERGIV TELGAIAVDTGIFTGRSPKDKYIVRDETTSDVLWWSDQNKGKNDNRPLTQETWSQLKQ LVTRQLSNKRLFVIDAFCGANKNSRLKVRFITEVAWQAHFVKNMFIRPSNEELEQFEP DFIVMNGAKCTNPQWQQQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSIMNYLL PLKGIASMHCSSNVGDRGDVAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDEGVFNF EGGCYAKTINLSAAAEPDIYHAIKPNALLENVVVLADGTVDFNDNSKTENTRVSYPID HIKNIVKPISKAGHAKKVIFLTADAFGVLPPVSCLNADQTQYHFLSGFTAKLAGTECG ITEPTPTFSACFGAAFLLLHPTKYAEVLVKRMQAVGAQAYLVNTGWNGTGERISIKNT RAIIDAVLNGEIDKATTFNTLPIFNLKFPTTLPGVDASILDPRNTYSSFNQWQQKAET LAQRFITNFDQYTDTPAGKALISAEPKI" gene complement(483860..484678) /locus_tag="REG_0499" /note="hypothetical protein; putative intracellular growth attenuator, interrupted by IS element; similar to GI 77962679; EcoGene EG12927" /pseudo mobile_element 484727..485616 /mobile_element_type="insertion sequence:ISRin2" gene 484792..485145 /locus_tag="REG_0500" CDS 484792..485145 /locus_tag="REG_0500" /note="similar to AA sequence GI 30249526" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfB" /protein_id="EFL92671.1" /translation="MTYPLKFRQHVLAFKKKEALTYAETADRFGVGSASLMRWAKRLE PCLTRNKPATKINRAALILDVETYPDASQHERAPRMGVSARGICDALKRAGFSYKKNI LSPQSRRPSSKRFSD" gene 485160..485591 /locus_tag="REG_0501" CDS 485160..485591 /locus_tag="REG_0501" /note="COG3335; similar to AA sequence GI 77163617" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfA" /protein_id="EFL92672.1" /translation="MDESGFAHDMPRLYGYSVKGKRCYGQHDCHAKARTNVIGAQLNG KLTTVCTFDCHINSDIFYAWVTQDLLPKSPPGAVLVMDNVRFHKRQDIQTAIQKAGFI LEYLPTYSPDMNPIEHKWAQAKALRRKRLCDIDTLFSDPLF" gene complement(485588..486445) /locus_tag="REG_0502" /note="hypothetical protein; putative intracellular growth attenuator, interrupted by IS element; similar to GI 77976424; EcoGene EG12927" /pseudo gene complement(486629..489223) /gene="mrcA" /locus_tag="REG_0503" CDS complement(486629..489223) /gene="mrcA" /locus_tag="REG_0503" /note="COG5009; similar to AA sequence EcoGene EG10748; similar to AA sequence GI 123444156" /codon_start=1 /transl_table=11 /product="peptidoglycan synthetase" /protein_id="EFL92673.1" /translation="MTLNGKSWVKLVKYFLIFVICCILLGAVSIFCLYKYIDQQLPDV AVLKDIRLQTPMLVYSAEGELIAQYGEKRRIPLSLGQIPQQLIQAVIATEDSRFYKHH GIDPIGILRAIFVVLSSGYASQGASTITQQLARNFFLNRERSIIRKIKEIFLALRIER FLTKDEILELYLNKIYFGYRAYGVGAAAEVYFGKKISQLTLAEMAVIAGLPKAPSIFN PLYSYHRAMSRRNVVLTRMLEVNYITQKQYKQARDEPIIANYHAAQVEFSAPYLSEMV RQEMIKRFGENAYTDGYQVYTTITKKLQLAATKALRANVLAYDMRHGYRGASDVLWKA GEVAWGYEQIMDWLGTLPVYGSLLPAVVTQVNEKNATVLLSDGNYVILSMEGVRWARP FKSDTLQGKIPKQVNDVVHLGQQIWVRKVNNSWWLAQVPAVNSALVSINPNDGSISAL VGGFDFNHSKFNRVTQSLRQVGSNIKPFLYAAILDKGFTLSSIFNDLPISRWDAGAGV EWRPKNSPPTYSGAIRLRQGLGQSKNVVMVRIIRSIGVDYAADYLQRFGFPAQNIVRT ESLALGSPSFTPLQLVRGYSVLVNGGYLVDPYFISKISDNTGNLLFVAQPKIAGECFN PPVIEEKIKSSAVIFNENRTNSEINQINHLPARGAATIELLATKGNKKEKKQKYAPQV ISRQLSFLMRDVLNSNIFGESGWMGTGWRAIGDLKRNDIGGKTGTTNNSKDAWFSGYG PDIVTSVWIGFDDHSRSLGSSSVAGVIENQISGVEGGAKSAQGAWNDFMKVALAGIPE KKTILPEGIVSVMIDKQTGKLSKGGSGSRVEYFIEGTQPTVYAAREVATKVETKLAMD DDQVEELF" gene 489706..490856 /gene="hofQ" /locus_tag="REG_0504" /note="putative fimbrial transporter; similar to COG4796; similar to GI 170022485; EcoGene EG12113" /pseudo gene 491929..492489 /gene="aroK" /locus_tag="REG_0505" CDS 491929..492489 /gene="aroK" /locus_tag="REG_0505" /note="COG0703; similar to AA sequence EcoGene EG10081; similar to AA sequence GI 156936450" /codon_start=1 /transl_table=11 /product="shikimate kinase I" /protein_id="EFL92674.1" /translation="MSSTNNINNTKNMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEF FDSDQQIEQRTGADVAWVFDVEGEDGFRDREEKIINELTEKQGIVLATGGGSVKSRET CNRLSARGVVVYLETTIEKQLARTQRDKKRPLLQQADESARHILETLAAEREPLYQKI ADVTIRTDDQSAKLVASQIINLLEKI" gene 493092..494183 /gene="aroB" /locus_tag="REG_0506" CDS 493092..494183 /gene="aroB" /locus_tag="REG_0506" /note="COG0337; similar to AA sequence EcoGene EG10074; similar to AA sequence GI 77976415" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthetase" /protein_id="EFL92675.1" /translation="MAKIIVKTERYSYPITIETGLIHNLASFLPLKANDQVMLVTNQT LAPLYLKSLLITLEGNGIKVDHVVLPDGEQYKSLTGLEQIFASLSEKFHGRGTTLIAL GGGVIGDLTGFAAACYQRGVRFIQVPTTLLAQVDAAIGGKTAINHAMSKNMIGAFHQP ISVVIDLDFLQTLPKSEFISGLAEVIKYAIALDSDFFVWLENNIEDLLARDTTALRYC IRRCCELKAGIVAIDEREENGQRALLNLGHTYGHAIEVAMGYGTWLHGQAVAAGMVMA AETAKLLGQFATADIERIKVLLLRAGLPTHGPDTMTAECYLPYMQRDKKVLAGELRLI LPTGIGQSEIRSGIPSHIVIKAIKHSQIS" gene 494227..495057 /locus_tag="REG_0507" CDS 494227..495057 /locus_tag="REG_0507" /note="COG3266; similar to AA sequence GI 123444148" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92676.1" /translation="MDDLKPIDGLKPDSNDHRPTPLRTKSLNGSRFAVSHQRIMIGMG ILVLLLIIIAILSAFEAPPPHKIKQRHEDIVTKEVNLSDNLSVTPHPPVLLNVEESEN NRPLQEEKIPQTFAASNEALPQTPLPSPPKDTHSPATTVTPQTLPKSSNNSDTNDAKV IINNKNTKTATKASSTKLESIQANDALRLAPGHHFTLQLSSASQPETLNTYAKQQKLT HYQIYETKRNTQPWYILVSGNYATLTEAKSALAQLPDAIKIKNPWIKPIHQLQQDLKN " gene 495234..496046 /gene="dam" /locus_tag="REG_0508" CDS 495234..496046 /gene="dam" /locus_tag="REG_0508" /inference="protein motif:PFAM:PF02086" /note="COG0338; similar to AA sequence EcoGene EG10204; similar to AA sequence GI 77975038" /codon_start=1 /transl_table=11 /product="Site-specific DNA methylase" /protein_id="EFL92677.1" /db_xref="PFAM:PF02086" /translation="MKKKRAFLKWAGGKYQLVDDVRQHLPAGECLIEPFVGAGSVFLN TEYKSYVLADINSDLINLYNTVKLRTNDFVRDARALFHDEYNCAEQFYTLRQEFNTSK DVYRRTLLFLYLNRHGYNGLCRYNLKGEFNVPFGRYKKPYFPEAELYWFAEKAQCATF VCEHYQQTLLKAQRGAVIYCDPPYAPLSVTANFTSYHSKSFTTADQKNLAHLAYQLFN QNKIPVLISNHDTELTRAWYYQATLHQVKASRTISSNILGRHKVNELLALYS" gene 496182..496919 /gene="rpe" /locus_tag="REG_0509" CDS 496182..496919 /gene="rpe" /locus_tag="REG_0509" /note="COG0036; similar to AA sequence EcoGene EG11960; similar to AA sequence GI 77958286" /codon_start=1 /transl_table=11 /product="D-ribulose-5-phosphate 3-epimerase" /protein_id="EFL92678.1" /translation="MKLPLGEGYMITAKFWSNIMTPFLIAPSILAANFARLGEETATV LAAGADVIHFDVMDNHYVPNLTFGSMVCQSLRNYGITAPIDVHLMVKPVDDLIAAFIK AGASSISFHPEASEHIDRSLQLIKDGGCKAGLAFNPATPLHYLDYVMDKLDVILLMSV NPGFGGQSFIPATLNKLRQARELIDKRGYAEIRLAVDGGINTENIYTVATAGADMFIA GSAIFAQSDYKAVIQTMRCELAKVANN" gene 496938..497957 /gene="trpS" /locus_tag="REG_0510" CDS 496938..497957 /gene="trpS" /locus_tag="REG_0510" /inference="protein motif:PFAM:PF00579" /note="COG0180; similar to AA sequence EcoGene EG11030; similar to AA sequence GI 157372831" /codon_start=1 /transl_table=11 /product="Tryptophanyl-tRNA synthetase" /protein_id="EFL92679.1" /db_xref="PFAM:PF00579" /translation="MSEMKEKKIVFSGAQPSGSLTIGNYIGALRQWKTMQNDYDCFYC IVDLHAITVRQDANKLRENTLDTLALYLACGIDPQKSTIFVQSHVPEHTQLNWILNCY TYFGELSRMTQFKDKSARHNENINAGLFSYPALMAADILLYQTDQVPVGKDQKQHLEL SRDIAQRFNTLYGNIFTVPQPWIPKDGGACVMSLQDPAKKMSKSDEDPKSRIGLLEDA KSVTKKIMGAITDSDNPAQIHYDRVKKPGVANLLTILSTISDKSIDQLVAEFTKKNYG ELKKSLAEELCSKLGDLQQRYKSYRSDEAELQKIMRAGAAKAQIRAQETLKKVYSAIG FVNPT" gene complement(498116..498562) /locus_tag="REG_0511" CDS complement(498116..498562) /locus_tag="REG_0511" /note="similar to AA sequence GI 87120536" /codon_start=1 /transl_table=11 /product="putative RTX-family protein" /protein_id="EFL92680.1" /translation="MFLDTSDVGYQISGGKDDDNLQGGRGDDRYQYALGDGHDILCDR GGQDRLEFSSINKEQLWLQKSGEDLKVLIQGTPEAGSVIIKNYYTDDTASKIETLSVS GYQLVGSNIDALAQAMTGFSSPESSGALPVARFNSQLSSLWLAMPA" mobile_element 498647..499061 /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene complement(498845..499714) /locus_tag="REG_0512" CDS complement(498845..499714) /locus_tag="REG_0512" /inference="protein motif:PFAM:PF00665" /note="C terminal truncation; COG2801; similar to AA sequence GI 224588244" /codon_start=1 /transl_table=11 /product="ISRin3 putative transposase" /protein_id="EFL92681.1" /db_xref="PFAM:PF00665" /translation="MDGRTCRTAPPPHKLSPCERAKLLEITSSAKFAHLPPSQIVPML ADEGLYFASESTFYRVLRDARQLKHRRAERPAKPRFKPRALCATAPNQLYSWDITYLP SRIKGQYFYLYLFLDIFSRKIVGWQVYAEESAQHASDMIKDICQREGILPGQVTLHSD NGSPMKGAILLFTLETLGIATSLSRPSLSNDNPYSESAFKTLKYRPEYPVNPFDNLQD SPIRRQACCCRAPACVDSVIHIIIDWRCSGIIIFPLTALCSLRVTKIRAPLLQVMNKN TLPPAPRGEFTFC" mobile_element complement(499062..499771) /note="partial element" /mobile_element_type="insertion sequence:ISRin3" gene complement(499824..500705) /locus_tag="REG_0513" CDS complement(499824..500705) /locus_tag="REG_0513" /note="COG1484; similar to AA sequence GI 10955428" /codon_start=1 /transl_table=11 /product="putative transposase orfB" /protein_id="EFL92682.1" /translation="MYDQLMETIYRSPLKPPRCWLRVLAESRSLSTLIGLTPWPPSGN FKGERYMNLQLSRIGELTSELQLPGIDANACDLAQQAAQQEWDYLTFLEQALQCEKRS RHQRKQHMFTRMAGFPSLKTLEDFDFTFAAGVPKKQVIELASLSFIERQENVVMLAPS GVGKTHIAIALGYKAVQAGIKTRFISASDLILQLATAQRQDNYKQVMQRSVQAPRLLI IDEIGYLPFTVQKASVILTSNLPFGQWGQVFANDTALTSAMLDRVLHHSHILQIKGES YRIKEKKKAGLMDKSKQ" gene complement(500698..501855) /locus_tag="REG_0514" /note="putative transposase orfA, pseudogene; similar to COG4584; similar to GI 194447102" /pseudo gene complement(502261..502476) /gene="rpmE" /locus_tag="REG_0515" CDS complement(502261..502476) /gene="rpmE" /locus_tag="REG_0515" /note="blastx intergenic; COG0254; similar to AA sequence EcoGene EG10889; similar to AA sequence GI 165936328" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31" /protein_id="EFL92683.1" /translation="MKDNTHPQYHSITASCSCGNVINICSTLNHDLKLDVCGKCHPFY TGKQREVATGGRVDRFNKRFTMPSISR" gene 502923..505121 /gene="priA" /locus_tag="REG_0516" CDS 502923..505121 /gene="priA" /locus_tag="REG_0516" /note="COG1198; similar to AA sequence EcoGene EG10763; similar to AA sequence GI 153948144" /codon_start=1 /transl_table=11 /product="Primosomal protein N' (replication factor Y) - superfamily II helicase" /protein_id="EFL92684.1" /translation="MLVFQIALPVPLARTFDYQLGNTMVSPTVGVRVRVPFGKRTAIG IVTAISTTSELPAEKLKTIDAILDKQSLFPTALWRILLWASDYYHCPIGEVLFHSLPV LLRQGKPTQLPPKYEWIVTEKGRMTPLDSLKRAPKQQQVLAILLKQSLYCDEAQKMAL ATRALHTLHSKELITLREQKPVFNDWRHQSLVVGEPLPLNTEQSAAVTAISNEAHHFV AWLLAGVTGSGKTEVYLSILENILAQGKQALILVPEIALTPQTIVRFRQRFNVPVVTL HSALNDSERLSIWLRARSGEAAVVIGTRSALFTPFLRLGVIIIDEEHDNSYKQHEGWR YHARDLAVCRAKEEDIPIIMGSATPSLETLHNVQIAKYRQLKLLKRAGNAKPEVQHLI DLKGLALTVGLSQPLLARIRTHLQANNQVMLFLNRRGYAPVLLCHECGWIAECQRCDH YYTLHQNLRQLRCHHCDSQRPVLKQCLNCGSTHLITVGVGTEQLENHLLPCFPDIPIT RIDRDTTSRKGALEKYLAEIHQGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSS DFRSAENFAQLYIQVSGRAGRAGKPGEVFLQTHHPEHPLLQILLQQGYNAFAEQALIE RKSVSLPPYSSHIVVRCEDHDNQQSALFLRQLKSLLESSPWKDEALWIMGPVPALQAK RSGRFRWQLLLQHPSRSLLQRLITHAKPLINKLPLARKVKWALDIDPIDH" mobile_element 505203..505507 /note="partial element" /mobile_element_type="insertion sequence:ISRin2" gene 505264..505548 /locus_tag="REG_0517" /note="ISRin2, transposase orfA, pseudogene; similar to GI 30249526" /pseudo mobile_element 505508..506928 /mobile_element_type="insertion sequence:ISRin3" gene 505788..506888 /locus_tag="REG_0518" CDS 505788..506888 /locus_tag="REG_0518" /inference="protein motif:PFAM:PF00665" /note="COG2801; similar to AA sequence GI 224588244" /codon_start=1 /transl_table=11 /product="ISRin3 putative transposase" /protein_id="EFL92685.1" /db_xref="PFAM:PF00665" /translation="MTRSEHNAVRGKMIIPEQRQSIMMWITESTQAGARQQQACLLIG LSTRTLQRWQKAIEQVDGRTRRTAPPPHKLSPCERAKLLEITSSAKFAHLPPSQIVPM LADEGLYFASESTFYRVLRDARQLKHRRAERPAKPRFKPRALCATAPNQLYSWDITYL PSRIKGQYFYLYLFLDIFSRKIVGWQVYAEESAQHASDMIKDICQREGILPGQVTLHS DNGSPMKGAILLFTLETLGIATSLSRPSLSNDNPYSESAFKTLKYRPEYPVNPFDNLQ DARAWVEHVVHWYNQEHRHSAIEFVTPAQRHAGLDKALLAQRNTVYEKARAANPTRWA GQIRQWPYVKEVHLNPQKSREKKVKPDAKKAA" gene 506985..507560 /gene="nfuA" /locus_tag="REG_0519" CDS 506985..507560 /gene="nfuA" /locus_tag="REG_0519" /inference="protein motif:PFAM:PF01521" /note="COG0694; similar to AA sequence EcoGene EG12935; similar to AA sequence GI 37524219" /codon_start=1 /transl_table=11 /product="Fe/S biogenesis protein" /protein_id="EFL92686.1" /db_xref="PFAM:PF01521" /translation="MIKITEQAQNHFSKLLANQETGTQIRVFVINPGTPTAECGVSYC PPDAIEASDTELKFDPFSVFVDQLSAPFLVDAEIDFITDQLGSQLTLKAPNAKMRKVA DDAPLMERVEYVLQSKINPQLASHGGRVTLMEITDDAFAVLQFGGGCNGCSMVDVTLK NGIEKELLQTFPELKGVKDSTEHQRGEHSYY" gene complement(507795..508766) /locus_tag="REG_0520" CDS complement(507795..508766) /locus_tag="REG_0520" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92687.1" /translation="MYMMISNNVSHNSLHFNHHNVLSLCTGVYREDFKPDLTVRDAFV NFFKKIFLLEDKEKRLIKLYKRIHSNCLDDQLNALIELKNNTCPALKNNYKVTVIYGE DYVETNIKSIEVSYDGFLLKKIELPASVIELHENKIDDVRQNKFEEFIEYGGFKIEEK FNGTYFFTALNLGLKKLLVDINDMRKIVKDYQKINNFSADKDKNQICSYVQITMTTSI MKILTDIAKKIPCYLVTISKMFELDSEHSVLSAASKQAFIAQLKNNIISSEMLSDVIK GTSGLLYQDKLGVELNMLSKKVCEVTMLFYESHIEKSCATFCDQDPN" gene 508976..510997 /locus_tag="REG_0521" CDS 508976..510997 /locus_tag="REG_0521" /note="COG1368; similar to AA sequence GI 37524470" /codon_start=1 /transl_table=11 /product="putative phosphoglycerol transferase" /protein_id="EFL92688.1" /translation="MWFYRFRQACLALLFPWLLAVFTQSAGRAYLLFTHGASKTLADF SLDVTRMFWIGGLFDIRIASLLFVPCLLMAGCLAVSNRIFLIWQRFWPWVAAILSVIV LIMTVVNVFYYATYERFIDVFVFGLIEDDTVAVLSTVWQSYPVIGVLFCLGLFSIIVF WFYRRWQRWLGTKPKYKISLPISIIITVVILFICFLGMRGSVGTFPLRQHDVQVSTIK MLNMLTPNGLIAMYWAVNAHQKNNQFVTATNEKGTELLSRFLERPTQASLTPFIAKTD TNRVAKKNPPNVVLAVMESMGYHLQSLDHHQRDLLGALRQHWLTDWHFERFISEGDGT IDSLNRFFVRSPMSSISQSSTQTAAFISNMFTPYLTNGYKIIFVTSGNGAWQNLNQFL PRLGVSEFMEQNGLKKRYPDASIGTWGVPDEYMFRYMKERLAEADKKGEPIFMMSMST THHPPYKTPTGYRKTDVELTETEKQRLRNLATDDELKTVLNTLAYANDQLGLFISWVK SQALGTHTIIAATGDHNIRGIGYPDTHELVLGHAVPFYLYVPQDYRQNSYFDSSRVGS HKDILPTLYQLSLSETTYYRTGCNLLSKTQDNTWCQGYNPEVAITAEGPCILTVHKEF RPWANQKGLFLGDPKDMTPEQEKQCNRWSTFTDLLWWQLNRQVGGQKSH" gene complement(511059..513659) /gene="gyrA" /locus_tag="REG_0522" CDS complement(511059..513659) /gene="gyrA" /locus_tag="REG_0522" /inference="protein motif:PFAM:PF00521" /note="COG0188; similar to AA sequence EcoGene EG10423; similar to AA sequence GI 77956426" /codon_start=1 /transl_table=11 /product="DNA gyrase A subunit" /protein_id="EFL92689.1" /db_xref="PFAM:PF00521" /translation="MSDLAREITPVNIEAELKGSYLDYAMSVIVGRALPDVRDGLKPV HRRVLFAMSVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML IDGQGNFGSVDGDSPAAMRYTEIRMAKIAHELLADLDKETVDFVPNYDGTEQIPAVMP TRIPNLLVNGSSGIAVGMATNIPPHNLTEVIEGCLAYIDDENISVEALMRHIPGPDFP TGAIINGGRGIAEAYRTGRGKIYLRARAEVVIDAKTQRETIIVHEIPYQVNKAKLIEK IAELVKEKRVEGISALRDESDKDGMRVVIEIKRDAVGEVVLNNLYSLTQLQITFGINM VALHAGQPKILPLKEILQSFVSHRREVVTRRTMFELRKARDRAHILEALVVALAHIDT IIELIRHAPTAADAKNGLMENAWPLSDVDEMLKRSSGDQITIGRNEDARPEWLEKEFG IHDESYHLTEQQAQAILDLRLQKLTGMEHDKLLDEYKDLLIKIVELISILKTPERLME IIKDELNAIKEQYKDPRRTNIIVNNLEINNEDLINQEDVVVTLSHQGYVKYQPLTDYE AQRRGGKGKSAARIKGEDFIDQLLVANTHDTILCFSSKGSLYWMKVYQLPEASRGARG RPIINLLPLKENERITAILPVREYDAGHHVFMATACGIVKKTALDCFSRPRKDGIIAI NLNEGDELIGVALTDGSNEVMLFSTDGKAVRFSESKVRSVGRKAAGMRGIKLNDDDRL VSLIIPQKEGEILTITKNGYGKRTLAEEYPTKGRATKGVLSIKTSERNGNVVAAIQVM TSDQIMIITDAGTLVRTRVSEINVQGRNTQGVRLIRTAKNEHVVGLQRVAEQDDDIVN EENVVNDQPE" gene 513865..514988 /gene="rnd" /locus_tag="REG_0523" /note="ribonuclease D; similar to COG0349; similar to GI 37526051; EcoGene EG10858" /pseudo gene complement(515260..515544) /gene="minE" /locus_tag="REG_0524" CDS complement(515260..515544) /gene="minE" /locus_tag="REG_0524" /inference="protein motif:PFAM:PF03776" /note="COG0851; similar to AA sequence EcoGene EG10598; similar to AA sequence GI 22126120" /codon_start=1 /transl_table=11 /product="septum formation topological specificity factor" /protein_id="EFL92690.1" /db_xref="PFAM:PF03776" /translation="MGGDAMALLDFFLSGKKPTANVAKERLQIIVAERRRGEHEPRYL PDLKRDVLAVICKYVQIDPDMLQVQFEQKEDDISVLELNVILPDTEEALK" gene complement(515534..516349) /gene="minD" /locus_tag="REG_0525" CDS complement(515534..516349) /gene="minD" /locus_tag="REG_0525" /note="COG2894; similar to AA sequence EcoGene EG10597; similar to AA sequence GI 77962230" /codon_start=1 /transl_table=11 /product="septum formation inhibitor-activating ATPase" /protein_id="EFL92691.1" /translation="MEALIIVVTSGKGGVGKTTSSAAIATGLAQHNKKTVVIDFDIGL RNLDLIMGCERRVVYDFVNVIQGEASLNQALIKDKRNQNLFILPASQTRDKDALTKEG VEQVLNDLNKMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGI LSSKSRRAEKGEDPIKEHLLLTRYNPGRVSRGDMLSMEDVLDILRIPLVGVIPEDPSV LSASNQGEPVILNTESDAGKAYADTVARLLGETLPFRFIEEDKKSFLKRLFGG" gene complement(516365..517066) /gene="minC" /locus_tag="REG_0526" CDS complement(516365..517066) /gene="minC" /locus_tag="REG_0526" /inference="protein motif:PFAM:PF05209" /note="COG0850; similar to AA sequence EcoGene EG10596; similar to AA sequence GI 77977704" /codon_start=1 /transl_table=11 /product="septum formation inhibitor" /protein_id="EFL92692.1" /db_xref="PFAM:PF05209" /translation="MSSLPSQPIKLKGSNFTLSVLHLYDPRPEVIRQALEKKMREAPG FLENAPIVINVALLPQNTNWLALRWAVRSVGLRIIGVNGYCDAQRMKLIQAGLPLFSE GQHKKDEKKSEAVNFPAESTTKTRVINAPVRSGQQVCAPCDLVVIGNVSAGAEVIADG NIHIYGKLRGRALAGASGNIQTNIFCMVLDAELVSIAGTYWLKEHIDEKYMGKAVRLH LLGDALKIELLNPNL" gene 517362..517784 /locus_tag="REG_0527" CDS 517362..517784 /locus_tag="REG_0527" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92693.1" /translation="MNSKPYIDDILIYSKYGIGNRKIQPRRSIMRKKLLFLLLVSNFV SFSWCLAEFDFSYHAAVPENNQPSLEYLEKRKKLEALEQLQISAQLQKRIAAETEANK IREEKKRKKEREEKIDRMKRKNGEKELGSVDGISYWYD" gene 517895..518281 /locus_tag="REG_0528" CDS 517895..518281 /locus_tag="REG_0528" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92694.1" /translation="MQSNLMRNLKIGVIFFSISIILSLIIFFAKNNSVETDKNELVTF NCITDDETDLAAFLDRKKHELILYDDIYQFIKIKEENDDEVLLFENKKNETTSIASIN ISMMPDATKHEKQILNYHCKVSHKIK" gene complement(518303..518827) /gene="dsbB" /locus_tag="REG_0529" CDS complement(518303..518827) /gene="dsbB" /locus_tag="REG_0529" /inference="protein motif:PFAM:PF02600" /note="COG1495; similar to AA sequence EcoGene EG11393; similar to AA sequence GI 167401422" /codon_start=1 /transl_table=11 /product="disulfide bond formation protein DsbB" /protein_id="EFL92695.1" /db_xref="PFAM:PF02600" /translation="MLHFLNRCSKQRQAWFLIGFSGLIFELIALYFQYIMLLQPCVLC IYERCALFGIIAASFVGAIAPNSSLRYIAIFLWIYSASKGIQLTWQHTMQYLYPSPFN TCDFFVDFPTFLPLDKWLPSVFSASADCSLQQWQLMSLGMPQWLLGIFSLYFIISVLV LLSQGSDRFIKRAI" gene 519438..520574 /gene="dadX" /locus_tag="REG_0530" CDS 519438..520574 /gene="dadX" /locus_tag="REG_0530" /inference="protein motif:PFAM:PF01168" /note="COG0787; similar to AA sequence EcoGene EG11408; similar to AA sequence GI 77956653" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="EFL92696.1" /db_xref="PFAM:PF01168" /translation="MPRPISATVHLSALHHNLVAVRDRVSYANSKIWSVVKANAYGHG LARVWRCLEKTDGFALLDLNDAVLLREQGWQKPILLLEGFFKTEDLALIDHYNLTTVV HSDWQLAALENAKLKKPVEVYLKFNSGMNRLGFPCEEAHEIWQRAKQIANIKHLTLMS HFANAAHNGNIDNEYRFIQQNCQSIPADCSSLANSAVILWHPSVYTSPINNLSNNNLS HFCHWVRPGIMLYGASPNGQVQAIKDLGLRPAMSLHSELLAVQTLKAGDTVGYGSHYR ANEAQRIGIVACGYADGYPRNAPTGTPILVEGVLTKTLGAVSMDMLAVDLKPCPHAQV GSIVELWGNHLPIDDVAMAAGTISYELMCALSARVPVSFITDGE" gene 520577..521011 /locus_tag="REG_0531" CDS 520577..521011 /locus_tag="REG_0531" /note="COG2867; similar to AA sequence EcoGene EG13193; similar to AA sequence GI 153947960" /codon_start=1 /transl_table=11 /product="polyketide cyclase/lipid transport protein" /protein_id="EFL92697.1" /translation="MPQIHRTKSVRFNVEQMYKLVNDISSYPEFLPGCIGGRVISANE SVIIAAVDIAKVGISKTFTTRNTLINNKSINMELVDGPFRKLLGDWQFTPLDDNTCKV ELYLDFEFTNKLVEIMFGNLFKALAENMVQAFSQRAETVYHA" gene complement(521117..521983) /gene="yfeD" /locus_tag="REG_0532" CDS complement(521117..521983) /gene="yfeD" /locus_tag="REG_0532" /note="COG1108; similar to AA sequence EcoGene EG12368; similar to AA sequence GI 22125787" /codon_start=1 /transl_table=11 /product="permease protein of chelated iron ABC transporter" /protein_id="EFL92698.1" /translation="MSSLLSLISEPFYYPFMQRAIFTAIATGVVCAILSCYLVLKGWS LMGDAISHAVLPGIVLAFVLGLPLVIGAFFSGIFCALSTGYLKENSRIKEDTVMGIVF SGMFALGIVLFSQVDTDQHLSHILFGNILGVTLTEFKQTLWITTFTLLVVLLKRKDLM LFCFDANHAQVIGLPIKWLHYGLLCLLALTIVTSLQAVGVILVIAMLIAPGIIASLVC RRFDIMLMIATLVSVVSCVLGTLISFHIDGATGPCIVIVQALFFFIVLIISPKNKKGA KRINVPRRQSAE" gene complement(521988..522845) /gene="yfeC" /locus_tag="REG_0533" CDS complement(521988..522845) /gene="yfeC" /locus_tag="REG_0533" /note="COG1108; similar to AA sequence EcoGene EG12368; similar to AA sequence GI 77962035" /codon_start=1 /transl_table=11 /product="membrane protein of chelated iron ABC transporter" /protein_id="EFL92699.1" /translation="MLEFLLQPFNYNYMLKAMWVSMIVGAVCAFLSAYLMLKGWSLMG DALSHSVVPGVAGAYALGLPYAAGAFFTGMLAALAMALVRHITRLREDAIIGFIFSTF FAVGLLIVSLNPTSINVQSIIFGNVLGIADEDVMQVEIIIFFSFLILCLVWKDLLAVF FDESHALSIGLSPLYLKLLFFTLLSACTVAALQMVGAILVIAMVITPGATAYLLTDRF GRLLIIAIIIGALTSAFGAYLSFYFNGATGSIIVTLQTTVFLLAFFFAPKHGLLSTRY RTRQQVTRR" gene complement(522845..523735) /gene="yfeB" /locus_tag="REG_0534" CDS complement(522845..523735) /gene="yfeB" /locus_tag="REG_0534" /note="COG1121; similar to AA sequence EcoGene EG10290; similar to AA sequence GI 77959144" /codon_start=1 /transl_table=11 /product="ATP-binding protein of chelated iron ABC transporter" /protein_id="EFL92700.1" /translation="MNQAPFIRPELLVKDVSVTYNNGHTAIHNANFSLAGGTICALVG INGSGKSTLFKSIMGLIKPTVGRVRLNNNPVSDALKKNSIAYVPQTEEVDWNFPVLVK DVVMMGRYGKMNFLRIPRASDHAIVNQAIERVGLSALCSRQIGELSGGQKKRVFLARA LAQQGSVLLLDEPFTGVDVKTENAIIDLLRVLRDEGHLVLVSTHNLGSVPEFCDQVIL INQTVLAAGPIDTTFTQKNLEMTFGGVLRYINLSGAALHDDNDARSVTVITDDERPAV FYGHSKNDPPTQMQKKETPR" gene complement(523732..524658) /gene="yfeA" /locus_tag="REG_0535" CDS complement(523732..524658) /gene="yfeA" /locus_tag="REG_0535" /inference="protein motif:PFAM:PF01297" /note="COG0803; similar to AA sequence EcoGene EG12678; similar to AA sequence GI 123442181" /codon_start=1 /transl_table=11 /product="periplasmic iron binding protein of chelated iron ABC transporter" /protein_id="EFL92701.1" /db_xref="PFAM:PF01297" /translation="MKYKKFVIYPYFLIANCVLISMVLCLLVGNLAHAEKKFKVITTF TIIQDMAKNIAGEAAIVESITKPGAEIHGYQPTPGDIVKAQSADLILWNGLHLESWFE RFFDNIKKKVPKAVVTEGITPLPIREALYKGAANPHAWMSPSNALIYIDNILRALVKH DPIHAKIYQHNAKIYAAKITALDGSLRERLARIPADQRYLVTSEGAFSYLAKDYDLKE LYLWPINAEEQGSARQMQAVIDQVRQHKIPVVFSESTISDKSAKQISKETGARYGGVL YVDSLSDAQGPVPTYIDLLNVTVDTIAKGFNQ" gene complement(524675..525535) /locus_tag="REG_0536" CDS complement(524675..525535) /locus_tag="REG_0536" /note="similar to AA sequence GI 123442029" /codon_start=1 /transl_table=11 /product="glycosyltransferase group 2" /protein_id="EFL92702.1" /translation="MIKDVGIVKARHPLDKQHIKLTYVTHFYCNQGDMDSVESLLAEY ESYPNDIKDAVEFVIVDDCSPLEYDVKDYDLNFTWLRITTDIQWNQAGARNLGVTYAK SDKIIITDLDCLLPEDTLRCLVNARNPGRSLYRIYRTDEKTGKAYRGHPNLFFMSRAR FFRLFGYDEEFAGHYGWEDYRFVKMHKDHGTTPRYLPKKFRCIERNVDRKKSYHSLDH NLTHNTPINDRKKSEIALFGSEYSHSRIFLNFKWDLKKVHSRPATIPERKPWWRPLWW FRYLFRSLSV" gene 526044..527210 /gene="arnB" /locus_tag="REG_0537" CDS 526044..527210 /gene="arnB" /locus_tag="REG_0537" /note="COG0399; similar to AA sequence EcoGene EG14089; similar to AA sequence GI 22125810" /codon_start=1 /transl_table=11 /product="UDP-L-Ara4O C-4' transaminase" /protein_id="EFL92703.1" /translation="MANFLPFSRPAIGEEEIAAVVDVLNSGWITTGTKNQQLEEKFCQ RIGCQHAISVCSATAGMHITLMALGIGPGDEVITPSQTWVSTLNIISLLGAKPVMIDV DRETLMINAAAIEEAITPQTKAIIPVHYAGAPCDIDAIRKIAIDKGIALIEDAAHAAG TSYKGQAIGAQGTAIFSFHAIKNITCAEGGMIATDDAKLAERVRRLKFHGLGADAFDR QIQGRCPQAEVIEPGYKYNLSDIHAAIALVQLNRLDKINARRQALAKQYQEAFKLPAL SSLQPLGIPDYEHVHAWHLFIVRVDKECCGVDRDTLTKALKDKHQIGSGLHFRAVHTQ KYYKKYYPELRLPHTEWNSDKLCSLPLFPDMQDGDIARVVNALQQIIGSASVTN" gene 527197..528201 /gene="arnC" /locus_tag="REG_0538" CDS 527197..528201 /gene="arnC" /locus_tag="REG_0538" /inference="protein motif:PFAM:PF00535" /note="COG0463; similar to AA sequence EcoGene EG14090; similar to AA sequence GI 157370395" /codon_start=1 /transl_table=11 /product="undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase" /protein_id="EFL92704.1" /db_xref="PFAM:PF00535" /translation="MSQIESIQKVSIVIPVYNEQESLPILLARTSAACQLLTQPYEII LVDDGSTDDSAAILTRAADAADSAIIAVILNRNYGQHAAIMAGFNQVSGDLVITLDAD LQNPPEEIPRLVKVAEEGYDVVGTIRENRQDSWFRKTGSRLVNMMIQHATGKSMGDYG CMLRAYRRHIVEAMLSCHERSTFIPILANTFARRTKEITVRHAERSFGDSKYSLMKLI NLMYDLVTCLTTTPLRLLSALGSMIAVSGFMLAFLLVILRLIFGSVWAGGGVFTLFAI LFMFIGAQFIGMGLLGEYIGRIYHDVRARPRYFIEKIVRAKSAETIHKKEQPCQEKEQ " gene 528180..530249 /gene="arnA" /locus_tag="REG_0539" CDS 528180..530249 /gene="arnA" /locus_tag="REG_0539" /inference="protein motif:PFAM:PF00551" /note="COG0451; similar to AA sequence EcoGene EG14091; similar to AA sequence GI 157370396" /codon_start=1 /transl_table=11 /product="bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase" /protein_id="EFL92705.1" /db_xref="PFAM:PF00551" /translation="MSGKRTIMKTIVFAYHNIGHAALTELATAGYDIQAVFTHLDDPQ ENNFFNSVAAKATEMGLPVYAPENVNHPLWVDRIKQLQPDIIFSFYYRNLLSPEILSL APKGGFNLHGSLLPRYRGCAPVNWVLVNGESETGVTLHQMLKKVDQGAIAGQRKVMID PEDTAFTLHEKITQAAQRLLRDLLPQIKQGSITLVPQNEEEASYFGRRTAADGKIDWQ QSAVTVNNLVRAVTKPYPGAFSYLGEQKLIIWQSRPLDIKHDEQPGTLLKTDPLIIAC GKGALEVIAAQSDPGLYLSGKQLAQEMGMMEKGCLGIKPNSQQTKPTRVLILGVNGFI GNHLTKRLLSEDNYEIYGLDIGSDAISCFMSHPRFHFVEGDISIHSEWIEYHIKKCDV VLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYKKRIVFPSTSEVYGMCDDKE FNEDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLDSL DAARIGSSRAITQLILDLVEGTPIKLIDGGEQKRCFTDIKDGIEALFRIIENHDNRCD GQIINIGNPADEASIRELAEMLVKHFKQHELYNRFPPFAGYKKIESSSYYGKGYQDVV HRTPCIKNARRLLNWQPKISMEETIKETLDFFLRSTLSHGDIAKNDEAIPTALEVAAR RPGRETR" gene 530246..531223 /gene="arnD" /locus_tag="REG_0540" CDS 530246..531223 /gene="arnD" /locus_tag="REG_0540" /note="COG0726; similar to AA sequence EcoGene EG14092; similar to AA sequence GI 22125813" /codon_start=1 /transl_table=11 /product="putative polysaccharide deacetylase" /protein_id="EFL92706.1" /translation="MSVDKLRDSGEGSQPTTRQLQRRRVYTVKKIGLRIDVDTYQGTQ QGVSTLLHLLQKYDLQASFFFSVGPDNMGRHLWRLLRPRFLWKMLRSNAVSLYGWDIL LAGTAWPGKLIANDLGALMKQTLAQGQEVGLHAWDHQGWQAKVDRWSDQQLTEQIKRG VDTLQQSLGQQVSCSAVPGWRADERVLAAKQSFAFNYNSDCRGTHPFRPQFADGRIGT VQIPVTLPTYDEVVGSEVQQQDFNDYILAAMLRDSGVPVYTIHAEVEGMSQSAMFEQL LQRAQQQGLCFCPLSTLLPTDQQQLPLGKIVRSPFPGREGWLGCQAEVE" gene 531227..533080 /gene="arnT" /locus_tag="REG_0541" CDS 531227..533080 /gene="arnT" /locus_tag="REG_0541" /note="COG1807; similar to AA sequence EcoGene EG14093; similar to AA sequence GI 170024074" /codon_start=1 /transl_table=11 /product="4-amino-4-deoxy-L-arabinose transferase" /protein_id="EFL92707.1" /translation="MMIKLFKNRKLFKNCQFFKNKALALLSIFFIILYLLPLNQRLLW QADETRYAEISREMLQRGDWIVPRLLDVRYFEKPVAGYWINNLSQWLWGENNFAVRFG SAFSIALTALLVFWLATRLWHNRSTAILATLIYLTFFLVFGVGSYAVLDPMISLWLMA AMVSFHLTSSAIPTALEIAARRPGGETDERRQLRDSANARSQQRGSFKGEGYKTSWQK IGAYALLGIACAMGVMTKGFLALVVPVIAIVPIVLLQKRVKELLFFGPIAVLAALLSC LPWALTIAQREPDFWHYFFWIEHIQRFATEDAQHKEPFWYYLPLLCLGVLPWLGLLPG ALLKGWRERVNRPELFFLLSWVLMPLIFFSIAQGKLLTYILPCMAPLALLMTAYATDC VNSQQMNAFKMNGIINLILGILCTLTVLILGMDYFPQWILLNQDENNKILLGMLAFAT WAVLGWWSLRANHRHWKVAAACPLLLATLVGYIIPQHIIDVKQPQHFIRQNSALLQES RYLLTNEVGIATGLAWELKRNDVMMFNSKGELSYGLNYPDSRDHYVNKLDFPTWLTQA RQQGNVVLVLLDNQKAIDDLPHADKIEQFNRLLLLSWLAKTDTPTMNTTSP" gene 533077..533415 /gene="arnE" /locus_tag="REG_0542" CDS 533077..533415 /gene="arnE" /locus_tag="REG_0542" /note="COG0697; similar to AA sequence EcoGene EG14344; similar to AA sequence GI 77980160; overlaps another CDS with the same product name" /codon_start=1 /transl_table=11 /product="subunit of ArnE/ArnF undecaprenyl-phosphate-alpha-L-Ara4N flippase" /protein_id="EFL92708.1" /translation="MIDYLLVLVVSLLTCAGQLCQKKATEGWQSSAKRTAASWLSLAL LLLGLAMLLWLRLLQSMPLSQAYPLLSVNFIFITLAGQYFFHEPVTSRHWCGIATIIL GIFLLNWHGK" gene 533405..533803 /gene="arnF" /locus_tag="REG_0543" CDS 533405..533803 /gene="arnF" /locus_tag="REG_0543" /note="COG0697; similar to AA sequence EcoGene EG14094; similar to AA sequence GI 77962211; overlaps another CDS with the same product name" /codon_start=1 /transl_table=11 /product="subunit of ArnE/ArnF undecaprenyl-phosphate-alpha-L-Ara4N flippase" /protein_id="EFL92709.1" /translation="MENKHNTRGYSWVIGSIVLITLAQLLLKWGMVSIPLMSLSDINF VFLTHHYIQLCTVIFGLLGYALSMLCWLCALRYLPLNQAYPLISISYVLVYLLAVAWF NETATVTKTLGALFILLGVWIIYMKPKKPS" gene 533832..535259 /gene="cpsB" /locus_tag="REG_0544" CDS 533832..535259 /gene="cpsB" /locus_tag="REG_0544" /inference="protein motif:PFAM:PF00483" /note="COG0836; similar to AA sequence EcoGene EG10161; similar to AA sequence GI 167586362" /codon_start=1 /transl_table=11 /product="mannose-1-phosphate guanylyltransferase" /protein_id="EFL92710.1" /db_xref="PFAM:PF00483" /translation="MKLIATILCGGVGSRLWPISRALHPKPFIRLKDGQSLLQKAFLR AAQLSGLTEILTVTNRDLFFKTEDEFREVNLSKIPTSFILEPFGRNTAAAIATASHYV TTKHGHDAIMLVLTADHLIDDQGAFQDAISKAIELATAGKLVTLGIKPKSPETGYGYI EADGNNVLRFVEKPPLKEAQEYFTSDQFLWNSGMFCFMADTMQQQLEQHCPDILAATK NCIEQALTTEGLGITQIILDANEFKNVRDNSIDYAVMEKSNRMAVVPCDIGWSDIGSW SGFGKLSEPDAEGNHVQGDALLHTTRNCTIYSNDGLISTVGVDNLIVIKTPDAVLVVD KSREQDVKHIYAELAARDHTSHKLHCTVHCPWGTYTVLEEGKNFKIKRIEVKPGASLS LQMHHHRSEHWIVVSGTAEVTNGEQVFYVKTNESTYIPAMHKHRLTNPGLIKLVMIEV QSGDYLGEDDIVRFKDNYGRCKQEN" gene 535259..536053 /locus_tag="REG_0545" CDS 535259..536053 /locus_tag="REG_0545" /note="possible lipopolysaccharide/polyol phosphate transport system; COG1682; similar to AA sequence GI 26988509" /codon_start=1 /transl_table=11 /product="permease component pf ABC-type transporter" /protein_id="EFL92711.1" /translation="MFNMLSSAWRYRFFIFSSIKTELRTKFIRSRLGGLWMILNPLAQ VIIFAFVLSAVLSARLPGINNQYAYAIYLMAGTLGWTLFAEIVNRCLTLFIDNGNILK KLAFPKIALPLIVMGSALVNNLLLFIAILAIFGLLGHTPGMALLWLPILMAIMVALAL GIGLTLGILNVFIRDIGQVVPVVMQFVFWLTPIVYMANIIPAQYHSWLVCNPLIPIVT AYQDILLYNRAPQWLDLTNTLIIALVLLLGSLVLFRKASPEMVDQL" gene 536050..537300 /locus_tag="REG_0546" CDS 536050..537300 /locus_tag="REG_0546" /note="possible lipopolysaccharide/polyol phosphate transport system; COG1134; similar to AA sequence GI 114799437" /codon_start=1 /transl_table=11 /product="ATPase component of ABC-type transporter" /protein_id="EFL92712.1" /translation="MNGQLQVQNLGKAYRQYGSELRRIASWFAPTVLPREEQWVLKDI NFSIAPGEAVGIVGQNGAGKSTLLKLITGTVQPTQGKVQLQSRVAAILELGMGFNPEL TGRQNAYHSACLMGYSHEIARVMPEIEAFAEVGEYFDQPMRTYSSGMQMRVAFSVATA FQPDLLIVDEALSVGDSYFQHKSFDRIRQFRAKGVSIMLVTHNMGDVRTLCDRVILLD QGRVLKDGLPDEVVDHYNALIAAKENAKLTIEQRREKNGWLLTKSGTGEARIRTLKLV DAASGDELAVAKVGQAVELLLEADIHADLPRLVLGYMIRDKQGHVVWGTNTWHTRQIQ ENVKTGDTLTFSMTFTCTLGSGSYSVSPALTSSDTHLINNYEWQDNLLVFEVLNADQD TFIGSSWLDAQFLISRNSNGYIAQ" gene 537297..538634 /locus_tag="REG_0547" /note="FkbM family domain-containing methyltransferase; similar to COG0500; similar to GI 221082022" /pseudo gene 538634..542359 /locus_tag="REG_0548" CDS 538634..542359 /locus_tag="REG_0548" /note="COG0438; similar to AA sequence GI 116754379" /codon_start=1 /transl_table=11 /product="glycosyltransferase group 1" /protein_id="EFL92713.1" /translation="MRIVIDLQGAQTHSRQRGIGRFTLSLAQAIVRNRGKHQIFLALN GLFPDTIEPIRAAFDSLLPQENICVWQSPGPVHQLDEANTWRRRSAELVREAFLASLK PDVVLICSLFEGLGDNAIISIGTLNCTVPTAVILYDLIPLIYSQHYLINPQNEAWYQR KLDHLRRADLLLAISEASQQDAINHLGFPVSACINISAAAEPYFQPQNIDSQQEKDIR QRYGLYQQFVMYTGGIDYRKNIEGLIRAYAKLPRLLRSSHQLAIVCSIQPSSRAILEK LAKEQGLDAKELVLTGFVPEEDLLTLYNLCKTFIFPSWYEGCGLPVLEAMACGRAVIG ANTSSLPEVIGKEEALFDPFNDSAIAEKLVQVLTDDSFRLALEQHGLAQAKRFSWDST AQRAITAMETLHIKQSGQSLTYSAPISRPKLAYVSPLPPERSGISDYSAELLPELARH YTIDVIAAQPSMSDPWIQANCQIRSLEWFRTYADRYDRVLYHFGNSSFHQHMFSLIKE IPGIVVLHDFFLGNLLAHMEKVSYQPNAWTQALYQSHGYTAVQQRFYQLDTAIWHYPC NLTALDSAHGVIVHTEYSNSLANQWYGKGAADDWAVIPHLRVPALNADRVTARRQLEL TDNDFVVCHFGMLGPSKQNHRLLTAWLASTLAKSNHCVLVFVGENHGGDYGADLITTI SNSGLKQRIHITGWANKSTFCHYLAAADIAVQLRSLSRGETSGTVLDCMNYALPTIVN ANGSMAALPDDGVWKLPDEFSDAQLIEALETLWRDPFRRQRLGEQAQKIIHTQHVPRH CADKYAQSIENMYRTMHAGVPALTNALAEIQPAPVDPNAWLLLANAIGQSIPPKLRVR QLFVDISELIQRDVGSGIQRVTRSILHELLSNSPAVYRVEPVYAESDGKGYRYARNYT LNMLNCSDSHLGNDDVIDFYNGDLFLGLDLHYHAVLAHQWFYQQMRNYGVQIYFLLYD LLPIQSSHSWPTQSEIKKIYHDWLKVLSETADGAICISQTIANALTEWLKSNAVPLHR RPFKIDWTHLGADIKNSLPSKGIPDTATEVFNALALNKNFLMVGTLEPRKSHTQTLEA FEQLWAQGIAVNLVIVGKQGWMVEALVEKLRHHPQLAKQLFWLEGVSDEYLEKLYDAA SCLIAASEGEGFGLPLFEAAQHKLPIIARDIPIFREIAGDHAYYFNGLEPNDLAQAIQ QWLKLDLEHRAPSSEHMPWLTWAESTQQLLAKILPAT" gene 542910..544884 /locus_tag="REG_0549" /note="hypothetical protein; similar to COG0574; similar to GI 157961231" /pseudo gene 544844..545402 /gene="gpsA" /locus_tag="REG_0550" /note="glycerol-3-phosphate dehydrogenase; similar to COG0240; similar to GI 77977373; EcoGene EG20091" /pseudo gene 545399..546067 /gene="uvrY" /locus_tag="REG_0551" CDS 545399..546067 /gene="uvrY" /locus_tag="REG_0551" /note="COG2197; similar to AA sequence EcoGene EG11140; similar to AA sequence GI 190147124" /codon_start=1 /transl_table=11 /product="UvrY transcriptional regulator" /protein_id="EFL92714.1" /translation="MINVLLVDDHELVRTGIRRILEDIKGIKVKGETQCGEDAVKWCR NHPVDIVLMDMNMPGIGGLEATRKVVRFSPDTKVIMLTIHTEDPLPKKVMQAGAHGYL SKGAALQEVVNAIRAVHAGQRYIASDIAQQMALSQLQPQAEAPFDCLSDRELQIMLMI TKGKKVNEIAEQLHLSPKTVNSYRYRMFEKLKINGDVELTHLAIRHGFFNKEKLDFFP NRSE" gene 546260..548032 /gene="uvrC" /locus_tag="REG_0552" CDS 546260..548032 /gene="uvrC" /locus_tag="REG_0552" /note="corrected polynucleotide tracks (4); similar to AA sequence EcoGene EG11063; similar to AA sequence GI 77957964" /codon_start=1 /transl_table=11 /product="endonuclease subunit of excinuclease UvrABC" /protein_id="EFL92715.1" /translation="MYDAEGAVIYVGKAKNLKKRLTHYFGIQNNLKTKSLVKNIVQID VTITHTETEALLLEHNYIKLHQPRYNVLLRDDKSYPFYFFLVPIFTRVSRYTVVACTK KGEYFGPFPDSYAVRETLALLQKLFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVTGL VSEEEYQQQINYVRLFLSGKDQQVLKNLISRMEKASHLLHFEEAAKLRDQIQAIRRVT EKQFVSGDDENLDVIGVSFNTGLACIHVLFIRQGKILGSRSYFPHIPSGTELNEIVQT FIGQFYLQGNQSRTLPEEFYWIFHLAEKELLSASLSELNGRKIQIQTRPRGARARYLK LAATNAAAALKTRLSQRSTIQQRMKELAKVLKLASINRLECFDVSHLMGEQTVAACVV FDSNGPLRSEYRRYHINGIKPGDDYAAISQVLMRRYDKAVDENNIPDVIFIDGGKGQL AQAVNVFSSLNVSWNKQKPLLISIAKGSDRKEGLETLFLSTRGKGDSLPSDSPALHLI QHIRNDAHNHAITGHRKRRSTVKMASVLEMIEGIGTKRRQMLLKHMGGLQPLLNASIE EIAKIPSISQTLAKRIFNTLKHRS" gene 548086..548634 /gene="pgsA" /locus_tag="REG_0553" CDS 548086..548634 /gene="pgsA" /locus_tag="REG_0553" /note="COG0558; similar to AA sequence EcoGene EG10706; similar to AA sequence GI 123442113" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphate synthetase" /protein_id="EFL92716.1" /translation="MQLNIPTWLTLLRIILIPFFVLAFYLPLEWAPMVSAIIFIFAAM TDWFDGFLARRWGQTTRFGAFLDPVADKIMVTIALILVTEYYHVWWITLPAATMIARE IIISSLREWMAEIGERSCVSVSWMGKTKTAAQMLSLIGLLWRPIPMIEMISIVLLYIA VVLTFWSMFQYLNIVRKNLAEP" gene complement(548910..549345) /locus_tag="REG_0557" /note="hypothetical protein; similar to GI 62180517" /pseudo gene 548918..548993 /locus_tag="REG_0554" /note="tRNA-Gly" tRNA 548918..548993 /locus_tag="REG_0554" /product="tRNA-Gly" gene 549039..549111 /locus_tag="REG_0555" /note="Pseudo tRNA_Cys" /pseudo tRNA 549039..549111 /locus_tag="REG_0555" /product="tRNA-Cys" /pseudo gene 549258..549344 /locus_tag="REG_0556" /note="tRNA-Leu" tRNA 549258..549344 /locus_tag="REG_0556" /product="tRNA-Leu" gene 549705..550272 /locus_tag="REG_0558" /note="chimeric putative phage integrase and primase; similar to GI 206580400" /pseudo assembly_gap 550273..550372 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="unspecified" misc_feature 550373..652272 /note="Region: supercontig 3" mobile_element complement(550373..550931) /note="partial element" /mobile_element_type="insertion sequence:ISRin1" gene complement(550424..550861) /locus_tag="REG_0559" CDS complement(550424..550861) /locus_tag="REG_0559" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92717.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" mobile_element 550927..553071 /note="partial element" /mobile_element_type="insertion sequence:ISRin6" gene 551017..551643 /locus_tag="REG_0560" CDS 551017..551643 /locus_tag="REG_0560" /note="COG4584; similar to AA sequence GI 183598505" /codon_start=1 /transl_table=11 /product="ISRin6, transposase orfA" /protein_id="EFL92718.1" /translation="MSSVGVFLPLSCRFIDEQITMSAFRISMRKLKEILRLKYRCQLS HRQIAKSLSVSPSVVSRYLNQAAQLGIRDYPLSPEWNELNLRAAFKQTPVKKKKSSLP DWSLICQELKHKIMTLQLLYEEYQQQNPANHYRYAHFAASTKAGSKCNPRRCDKPTKR EKSCSSIIVAPPSTSLTPKRVNSAQLRCLWRFSGRQITPMPKLPGVNA" gene 551705..552964 /locus_tag="REG_0561" CDS 551705..552964 /locus_tag="REG_0561" /note="COG4584; similar to AA sequence GI 114562730" /codon_start=1 /transl_table=11 /product="ISRin6, transposase orfB" /protein_id="EFL92719.1" /translation="MPDNLKSGIDKACRYEPDLNPTYQQLAYHYDTVVVAARPYKPKD KAKVEVAVQIVERWIMAKLRRETFYSLKALNQRIQELLIELNNKPMKKRPGSRLSQFQ QIDKPVLKPLPRLPYRYTQVTQVRVQMDYHVEVDKHYYSVPHTLLKQKLEAHVSGELV NLFHRGELVAVHPRSHDVGGHSTLENHMPEAHKQQGRWTASRVDYSASRQLDKATIRS LTQGEWLKHHQNILITGATGCGKTWLACALGHHYCQQGMSVFYFRLKQLLAQMYLAQA QGSYRKLLDTLANCSLLLLDDWGLEPLNSQQRGDLLELIDARYDRTSTLITSQLPVAN WYQMIGESTHADAILDRLLHNAIKLELKGESMRKSIDLFGNLLRDTDPALSGARNPHV LYVNEGCCAPGALTPHNELRFPKRSNE" gene complement(553151..554473) /gene="pqiB" /locus_tag="REG_0562" CDS complement(553151..554473) /gene="pqiB" /locus_tag="REG_0562" /note="COG3008; similar to AA sequence EcoGene EG14022; similar to AA sequence GI 77980096" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein B" /protein_id="EFL92720.1" /translation="MNMPQETPTTPIEAQIKHKYRISPFWLLPFIALLIAGSLVYNNW QQRGVEITIDFQSAAGIVAGRTPIRYQGVDVGGVQSVNLTDNLSKIEVKANIKNELKD QLLSGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGNGKPKTHFIALDTQPKFHQNT GELMIHLQANDLGSLNIGSLVYYRKIPVGKVYDYRLAAESGLQKNSGQAHRGVIIDVL IDPRFITLVKDDSRFWNVSGFKGAFSLNGVSIQMENISALVNGAIAFDSPADSLHATM DQTFPLYADLAHSQRGVSITLDLPNGNNLQEGRTPLIYQGLQVGILTKLILQADKKVR GELAIDPSVIDLMRTGSRIEMKSPRVSLNDVKLSELLTGNTLELFPGEGAPKKHFTVL DSSSSLLQQPNVLSLQLSAPQSYGIDVAASLLCSMAPSVSLVVASNFR" gene complement(554436..555695) /gene="pqiA" /locus_tag="REG_0563" CDS complement(554436..555695) /gene="pqiA" /locus_tag="REG_0563" /note="COG2995; similar to AA sequence EcoGene EG14021; similar to AA sequence GI 123442145" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein A" /protein_id="EFL92721.1" /translation="MPPLHHDHVLSNGCIQRCIQCDLLFNLPVLHKKQRAYCPRCRAK IAMGQDWSLNRLMVIVIAMLVLMPFAFCSPLISIRLLGTWIDASLFSGIWQISRQGDP FTASMVAFCTIGAPLILSFSLLYLTLGSRMGLNLRPVLLMLEQLKEWVMLDIYLIGII VTCIKVNEYAEISAGVGLIAYLFLTLLTLLILIHLNVEQLWQRFYPQPSFSLGCYEMM QKLLVCHHCHYSGYPDQRQCCTRCHLHLQRRCHHCLQKTWAALIAAMLLLLPANLLPM SVVYANGMRIEDTLFSGVVSLASAGHFSIAAIVFIASVLVPLSKIIILLTLLLSIHLK TQHSLKTRIRLLRIITWIGRWSMLDLFVIALMMSLINRDQIIVFTMGPAAFYFGAAVI LTILAVEWLDSRLIWDEHATGNTDYTD" gene 556176..556814 /gene="proQ" /locus_tag="REG_0564" CDS 556176..556814 /gene="proQ" /locus_tag="REG_0564" /inference="protein motif:PFAM:PF04352" /note="COG3109; similar to AA sequence EcoGene EG12866; similar to AA sequence GI 22125759" /codon_start=1 /transl_table=11 /product="putative structural transport element" /protein_id="EFL92722.1" /db_xref="PFAM:PF04352" /translation="MENQPKLNNNKEIIAFLAERFPQCFTTKGKAFPLKIRIFQDLVA RIEELNNVSKTKLRAALRRYTSSWRYLYEIKIGIERVDLEGNPCGKLEQQHVDHAKKQ LEEAKAHLQLKKAEQQIKKPKPAAPNAKIPTQQQPKHSPLPDSAHQIVKPIPASSTPS TTMPELKIGQTIKVKAGQKAMNGTVLEFVKNGIRVQLSSGLAMIVRAEHLQL" gene 556833..558881 /gene="prc" /locus_tag="REG_0565" CDS 556833..558881 /gene="prc" /locus_tag="REG_0565" /note="COG0793; similar to AA sequence EcoGene EG10760; similar to AA sequence GI 123442148" /codon_start=1 /transl_table=11 /product="carboxy-terminal protease for penicillin-binding protein 3" /protein_id="EFL92723.1" /translation="MNKLVKLTVVACLFLTTGGRCAQDKIHRIDQLPQLHQEPQHETV SKRITSRFLHSHYRQFDLDDTFSSQIFDRYLNMLDYSHNVLLASDIAHFAAKKTEIGN ELKSGQLDTPYALFNLAQKRRFERYQYALSLLDKPMVFTTNDSIDLDRAKAPWPTSEA ELNKLWDAKVKFEQLNLKLSGKTDKEIKDTLNKRYYSVLKRIVQSNSEDVFQLIANAF AREIDPHTSYLSPRNTEQFNTEMSLSLEGIGAVLQMDEDDYTLINSIVPGGPAAKSKS IVIGDRIVGIAQENNSMVDVVGWRLDDVVALIKGPKGTKVHLDILPAAKGSKHKTVTL IRERIRLEDRAVKVSIKTVDKKQVEVFDIPGFYVGLTEDVKVQLQKLAAKNIQSIVID LRGNGGGALSEAVSLSGLFIPSGPVVQIRDNNGKIREDSDTNDRIDYTGPLVVLIDRY SASASEIFAAALQDYQRAVIVGEPTFGKGTVQQYRSLNRMYDPLLRPEWPILGSVQYT IQKFYRVNGGSTQRKGVKPDIVMPTISDSEETGESLEDNALPWDSIPAATYAKVDNLH PLIAALSKEHAARIAVDAEFQNIKQDIARYNALKDKKNIVSLNYDQRVKENQNDDAIS LTRLNEHFKRQGKKPLKSLTDLPKDYQAPDPYLDESVRIALDLAYFSNTKINNNEIKN " gene 559022..559909 /gene="htpX" /locus_tag="REG_0566" CDS 559022..559909 /gene="htpX" /locus_tag="REG_0566" /note="COG0501; similar to AA sequence EcoGene EG10462; similar to AA sequence GI 77980102" /codon_start=1 /transl_table=11 /product="integral membrane heat shock protein" /protein_id="EFL92724.1" /translation="MMRIALFLLTNLAVMLVFGLVLSLTGIKSSSMSGLMIMAALFGF GGSIVSLLLSKWMALRSVGGEVIEQPRNETERWLLDIVQQQSKQAGIAMPQVAVYPAP DINAFATGARRNASLVAVSSGLLENMSRDEAEAVIAHEISHIANGDMVTMTLIQGIVN TFVIFISRIIAQAASSFLSGDREEGSEENNSGNPIVYFVISMVLELVFGILASMITMW FSRHREFHADAGSAKLVGREKMIAALQRLKTSHEPEEASSMMAFCINGKSRSFSEFFM SHPPLDKRIEALRSGQYLN" mobile_element 560116..561035 /mobile_element_type="insertion sequence:ISRin1" gene 560186..560623 /locus_tag="REG_0567" CDS 560186..560623 /locus_tag="REG_0567" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92725.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 560632..561009 /locus_tag="REG_0568" CDS 560632..561009 /locus_tag="REG_0568" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92726.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 561033..561860 /gene="amiD" /locus_tag="REG_0569" CDS 561033..561860 /gene="amiD" /locus_tag="REG_0569" /inference="protein motif:PFAM:PF01510, PF01471" /note="COG3023; similar to AA sequence EcoGene EG13687; similar to AA sequence GI 77961607" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="EFL92727.1" /db_xref="PFAM:PF01471" /db_xref="PFAM:PF01510" /translation="MNRLSILFLILLMAGCSSDRFVDRGDYKADTSFPAVGQNDRVSS LVLHYTALNDEKSIKVLTQRQVSAHYLVLEHPEKERGKPVVLQLVDEKARAWHAGVSN WRGRSNLNDSSIGIEIVNLGYTKTFFGKKWYPFNQQQIELITHLTKDIVKRYKLDPTN VIAHSDIAPLRKSDPGPLFPWKGLASIGVGAWPDENVVKKYIAHRDKYAIASVSEIQK ALAKYGYTIPQTGELDKETKRVISAFQMHFRPADFSGTPDVETEAIALALVEKYRSK" gene complement(562123..562476) /locus_tag="REG_0570" CDS complement(562123..562476) /locus_tag="REG_0570" /note="COG3344; similar to AA sequence GI 52549848" /codon_start=1 /transl_table=11 /product="reverse transcriptase" /protein_id="EFL92728.1" /translation="MVYCKDGSRKGHYPVIHFDFLGYRFQPRCAQRRDGTLFLSFLPA VSVKSAKAMREKIRSWKIHRWTQLTIKKLADSFNRVLLGWMNYYGKFYKSKLASLFDQ LDFALVRWPNGNTNG" mobile_element 562536..563454 /mobile_element_type="insertion sequence:ISRin1" gene 562605..563042 /locus_tag="REG_0571" CDS 562605..563042 /locus_tag="REG_0571" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92729.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 563051..563428 /locus_tag="REG_0572" CDS 563051..563428 /locus_tag="REG_0572" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92730.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(564181..565836) /gene="groEL" /locus_tag="REG_0573" CDS complement(564181..565836) /gene="groEL" /locus_tag="REG_0573" /note="COG0459; similar to AA sequence EcoGene EG10599; similar to AA sequence GI 6225139" /codon_start=1 /transl_table=11 /product="Chaperonin GroEL (HSP60 family)" /protein_id="EFL92731.1" /translation="MRERTMAAKDVKFGDNARKKMLRGVNILADAVKVTLGPKGRNVV LDKSFGSPTITKDGVSVAKEIELEDKFENMGAQMVKEVASKSNDAAGDGTTTATVLAQ AIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKKLSKPCTDSKAITQVGTISANAD ETVGKLIARAMEKVGKEGVITVEDGSGLENELDVVEGMQFDRGYLSPYFCNKQDTMTA ELDTPSILLVDKKISNIRELLPILEAVAKAGKSLLVIAEDVEGEALATLVVNTMRGIV KVAAVKAPGFGDRRKAMLQDIAVLTKGTVIAEEIGLELEKTILKDLGQAKRVIITKDN TTIIDGAGDPAAIADCVCSIKKQIEDVTSDYDREKLQERVAKLAGGVAVIKVGAATEI EMKEKKARVEDALQATRAAVEEGVVAGGGVALIRAAALIGNLKGDNEDQNVGIKVALR AMEAPLRQIVINAGEEASVIANNVKSGKGNYGYNAQTEEYGDMVEIGILDPTKVTRSA LQYAASIAGLMITTACMIGDLPNDKNKGADMGAAGMGGMGGMM" gene complement(565880..566170) /gene="groES" /locus_tag="REG_0574" CDS complement(565880..566170) /gene="groES" /locus_tag="REG_0574" /inference="protein motif:PFAM:PF00166" /note="COG0234; similar to AA sequence EcoGene EG10600; similar to AA sequence GI 22124522" /codon_start=1 /transl_table=11 /product="Co-chaperonin GroES (HSP10)" /protein_id="EFL92732.1" /db_xref="PFAM:PF00166" /translation="MKFRPLHDRVIVKRKEAESKSAGGIVLTGSAAGKSNRGEVIAFG SGRILDGKVVPLDVKVGDVVVFNDGYGVKVEKIDNEEVLIMSESDILAVVEA" gene complement(566361..566750) /gene="fxsA" /locus_tag="REG_0575" CDS complement(566361..566750) /gene="fxsA" /locus_tag="REG_0575" /inference="protein motif:PFAM:PF04186" /note="COG3030; similar to AA sequence EcoGene EG12382; similar to AA sequence GI 50119572" /codon_start=1 /transl_table=11 /product="FxsA cytoplasmic membrane protein" /protein_id="EFL92733.1" /db_xref="PFAM:PF04186" /translation="MGVAITLLLIIFTSCVGISLVRNQGIKTLIQMRQRLATGESPAQ EMVKSVSLILAGFLLLIPGFFTDFLGLLLLLPLVQKLLIIKLMPHLNIYASATTGSSR TGEIFDGEYQRKDDVPDRLEKRQNDKE" gene 567278..568756 /gene="aspA" /locus_tag="REG_0576" CDS 567278..568756 /gene="aspA" /locus_tag="REG_0576" /note="COG1027; similar to AA sequence EcoGene EG10095; similar to AA sequence GI 77973358" /codon_start=1 /transl_table=11 /product="Aspartate ammonia-lyase" /protein_id="EFL92734.1" /translation="MSNSMGIKKNQAAAEYRTEKDLLGEKKVPIEAYYGIHTQRAIEN FCISDSKINDIPEFIRGMVMVKKAAAMANKELNAFLSTEEENDQEKIKNAERIAHAII EACDIMLEGKYMDQFPIDVFQGGAGTSFNMNINEVLANIGLTLMGRKKGEYQYLNPND HVNKSQSTNDAYPTGFRIAVYNSILKLIDAIACLREGFGRKSGEFCEILKMGRTQLQD AVPMTLGQEFKAFQVLMSEEIKNIARTAEFLLEVNLGATAIGTKLNTPDNYQDKVLEK LREVSGLKCVPAEDLIEATSDCGVYVMVHSTLKRLAVKLSKICNDLRLLSSGPRAGLN EINLPALQAGSSIMPAKVNPVIPEVVNQVCFKVIGNDLCVTMAAEAGQLQLNVMEPVI GQAMFESIHILTNACYALLDKCVISITANKEVCENFVFNSIGIVTYLNPHIGHHEGDE IGKICAETGKSVREVVLEKGLLSEKKLDSIFSVENLMHPTNL" gene 568953..570683 /gene="dipZ" /locus_tag="REG_0577" CDS 568953..570683 /gene="dipZ" /locus_tag="REG_0577" /inference="protein motif:PFAM:PF02683" /note="COG4232; similar to AA sequence EcoGene EG12178; similar to AA sequence GI 77960693" /codon_start=1 /transl_table=11 /product="Thiol:disulfide interchange protein" /protein_id="EFL92735.1" /db_xref="PFAM:PF02683" /translation="MHRIFTLALLLCSVFLSTLQYLHAEPIKPLNQEAEQNEFMPSQR AFAFDFKQQDNQLVLHWQIQPGYYLYRQQLKIVPQQAMLGAFVIPEGISYQDEFYGAI PIFKQELTVTLPITRAAEGSHIQVTYQGCAAARFCYPPETRTIPLHAITPKDPQLPLQ RSLNPTELPFSPFWALLIGIAIAFTPCVLPMYPLIAAIILGSEKPRSPRQIFWLALTY VQGMALTYTLLGWVVARAGLQFQTALQHPYVLFTLSALFILLALSMFGFYSINLPSHW QTRLVAWSNHQKSGSVAGVFIMGALAGLICSPCTTAPLSAILLYIAQSGNTLAGGATL YLYALGMGLPLIIVTLFGNRILPRSGLWMQYTKEAFGFVILALPVFLLERVLGNIWGA RLWSLLAVIFFSWAFVSSLTFQQRWKRLIQILLLVSLLIAVQPLQNWVFTADLFSRNI KHYLRFQRVENLSQLHEALRQAKGKSVMLDLYADWCGACKELEKYTFSDLEVQKRLAN TVLLQVDLTKNSPEQLAILKKLQVLGLPSILFFDPQGQEINQARISGFINARDFTIHL QNKPLSKPAL" gene complement(571341..571622) /locus_tag="REG_0578" CDS complement(571341..571622) /locus_tag="REG_0578" /inference="protein motif:PFAM:PF03937" /note="COG2938; similar to AA sequence EcoGene EG13075; similar to AA sequence GI 77956433" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92736.1" /db_xref="PFAM:PF03937" /translation="MKIQNVKIDNKARVYWACRRGMRELDIVIMPFFEYEYETLSNDD KGLFMRLLKSDDPDLFNWLMNYGEPQDSELQRMIKLIQMRNKARGSLAM" gene 571653..572630 /locus_tag="REG_0579" CDS 571653..572630 /locus_tag="REG_0579" /inference="protein motif:PFAM:PF01571" /note="COG0354; similar to AA sequence EcoGene EG12685; similar to AA sequence GI 77963243" /codon_start=1 /transl_table=11 /product="aminomethyltransferase folate-binding domain-containing hypothetical protein" /protein_id="EFL92737.1" /db_xref="PFAM:PF01571" /translation="MAHIISFPAQIPHASSQLPLTLMTLDDWVLVTITGVDRVNYLQG QVTADVAAMTAEQHIMTAHCDPRGKMWSNLRLFHREEGLVFIERRSVLDNQLKELKKY AVFSKVNISVDTKAVLLGVAGLTARETLATLFSTLPNTKHPVVQQGITTLLHFTQPTE RFLLVTDAFQAQQWIEILRSRTQFNNSNQWMALDIQAGFPIIDEKTSALFIPQATNIQ TLGGISFTKGCYTGQETVARAQYRGANKRALYWLAGNANRVPLPGDDLEWQLNENSWR RTGTVLSAVQLSDGTLWIQAVLNNDFTENTNLRVRDDNSSQLRIQPLYP" gene complement(572765..573580) /locus_tag="REG_0580" CDS complement(572765..573580) /locus_tag="REG_0580" /inference="protein motif:PFAM:PF01609" /note="COG5433; similar to AA sequence GI 37527658" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="EFL92738.1" /db_xref="PFAM:PF01609" /translation="MLSWINERRERTGRTLIALDGKTLRRSWSEEICTALHTVSAYDV DAGITLYQKAANSKGKEGELARQIIDALALDNAVVTLDSLHCQTSTLSLITQRNGDFV VPLKANQKTLFATAYYTDKVHEYTQTNQGQGRVEKRTVMQINAELPEELKAKWPSIRT FIEVASERTKNEVTHCRSRWYVSSLPLNAEQAALAIRQHWGIENQLHWVLDVVFKEDE LSIKAPEGAAHMALFNRVALSLIKQHKGKQDSIASKRRKAAWSADFRSQLIFG" gene complement(573604..573804) /locus_tag="REG_0581" CDS complement(573604..573804) /locus_tag="REG_0581" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="EFL92739.1" /translation="MSILKQLALIPDPRKDINIKHQLIDVIFLVFATVVKWSLGMEIN QSMALIKTASPAAIALLTLSMH" gene complement(574288..574629) /locus_tag="REG_0582" CDS complement(574288..574629) /locus_tag="REG_0582" /note="COG3514; similar to AA sequence GI 195941103" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92740.1" /translation="MMTEKNISVLFQHDEQVKLRGRCMNKIPESIRKELALLAAKPEN KIDFSDIPATSKEEWQGAVRGKFYRPLKKQLTVRIDADVVEWLKSQGDGYQSRMNCIL RGAMLSKIQSE" gene complement(574544..574825) /locus_tag="REG_0583" CDS complement(574544..574825) /locus_tag="REG_0583" /note="COG2929; similar to AA sequence GI 170768592" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92741.1" /translation="MKFSWDTTKDKNNQCKHGISFTAAKLVFDDPWHITRQDRTEGGE LRWQTIGMIDNIALLLVAHTWNDDGEEHIRIISARRASKTERKVYEQNS" gene complement(575227..576967) /locus_tag="REG_0584" /note="putative phage replication protein; similar to COG1484; similar to GI 206576854; EcoGene EG10237" /pseudo gene complement(577167..577610) /locus_tag="REG_0585" CDS complement(577167..577610) /locus_tag="REG_0585" /note="similar to AA sequence GI 146312263" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92742.1" /translation="MDKRALINRLCERVTGGRAVAAAYLGISESKFNNHLYENKGSRF FSIDELVALQTLSGSSLVAEYFATRSDAIVVPTPSAEVDTVELHHMCLNTAVKRSAVD QLILEAIRNHGSINEQAQQKILEAHRKHIATRDGEIRATLQVYGK" mobile_element 577741..578659 /mobile_element_type="insertion sequence:ISRin1" gene 577810..578247 /locus_tag="REG_0586" CDS 577810..578247 /locus_tag="REG_0586" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92743.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 578256..578633 /locus_tag="REG_0587" CDS 578256..578633 /locus_tag="REG_0587" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92744.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(578704..579489) /gene="nadD" /locus_tag="REG_0588" CDS complement(578704..579489) /gene="nadD" /locus_tag="REG_0588" /note="COG1057; similar to AA sequence EcoGene EG13241; similar to AA sequence GI 77979036" /codon_start=1 /transl_table=11 /product="nicotinic acid mononucleotide adenylyltransferase" /protein_id="EFL92745.1" /translation="MSSKHIDINIPNEFRVTARRQSSESLKCTVVHDRVSASCQRRRN LKGEGYKLHALLGGTFDPIHYGHLRPIESLARQIGLQHVMLMPNHVPPHRRQPEASPQ QRLKMVELAVADNPLFSVDRRELMHDGLSYTVDTLERVRLEKGNKMPLAFIIGEDSLL SLPTWQRWLSLLDFCHLLVCARPHHVNEKPIPELQQWLDKYQIKDVKKLCHQPKGYIY LANTPLLDISATDIRHRYHQGQRCDNLLPPAVQQYIELKGLYR" gene complement(579482..580513) /gene="holA" /locus_tag="REG_0589" CDS complement(579482..580513) /gene="holA" /locus_tag="REG_0589" /inference="protein motif:PFAM:PF06144" /note="COG1466; similar to AA sequence EcoGene EG11412; similar to AA sequence GI 77973035" /codon_start=1 /transl_table=11 /product="DNA polymerase III delta subunit" /protein_id="EFL92746.1" /db_xref="PFAM:PF06144" /translation="MIRIYPQQLARQLNAGLHGCYLFCGNDPLLRQESQESLHHAAQQ HNFSEYFNITLDAHTDWEAIFSICQSLSLFASRQILSLTFPETGLSALMSQQLIKLVT LLHPDILLILGINKLIKTQENSQWYKALSQNAVLVNCQTPDHTQLPRWMNTRAKKMKL EVDEAAILLLCDCYEGNLLALSQALQTLSLCYPDGKLTLPRVEQAVHNSACFTPYHWL DAVLAGSRQRTWHILKKLQQEEDTPVILLRILQRELLLLTTLKRQMKQTGLTVLFEQY HVWQNRRNALTQALQRLSIQQIYQAIHLLTKIEIHFKNDHSYSIWPGLETLSMLLCGE VLAESFLNV" gene complement(580510..581202) /gene="rlpB" /locus_tag="REG_0590" CDS complement(580510..581202) /gene="rlpB" /locus_tag="REG_0590" /inference="protein motif:PFAM:PF04390" /note="COG2980; similar to AA sequence EcoGene EG10855; similar to AA sequence GI 22125086" /codon_start=1 /transl_table=11 /product="rare lipoprotein B" /protein_id="EFL92747.1" /db_xref="PFAM:PF04390" /translation="MRRMIGILLLGLAVLLSTGCGFHLRGSTQVPAKLQNMLLESSDP YGSLTRSIRQQLRLNNVNIVDDATRKDLPTLRIIGSSDSQSTVSIFKNGTSAENQLAL KVQTQILMPGRGIYPLDVTVFRSFFDNPLTALAKEAESEIIHQQMRDQAAEQLIRKLL TVDVENSDSKENQKNEPLAINDIPTALEVAFGYQGVRPMSVDRLPDEANPRSQQRGGF KGEGYTQRLNQR" gene complement(581211..583832) /gene="leuS" /locus_tag="REG_0591" CDS complement(581211..583832) /gene="leuS" /locus_tag="REG_0591" /inference="protein motif:PFAM:PF00133" /note="COG0495; similar to AA sequence EcoGene EG10532; similar to AA sequence GI 162421444" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="EFL92748.1" /db_xref="PFAM:PF00133" /translation="MQEQYCPEDIEPQVQLHWQQKKTFKVVEDSSKEKYYCLSMLPYP SGRLHMGHVRNYTIGDVISRYQLMLGKNVLQPMGWDAFGLPAESAAVKNNTVPAPWTY ENIDYMKKQLQLLGFSYDWDREIATCKPDYYHWEQWFFTQLYQKGMAYKKTSAVNWCP HDRTILANEQVIDGCCWRCDSKVERKEIPQWFIKITAYADQLLDDLDKLESWPEQVKT MQRNWIGRSEGVEISFDVVGMKEKLTVYSTRPDTFMGVTYLAVAAGHPLSLQVAAIDS GVAEFVEQCRNTKIAEADVATMEKKGMATGLFAIHPLSGEKIAIWIANFVLMDYGTGA VMAVPAHDQRDWEFAVKYGLPIKAVILTADDQVPDLNQQAMTEKGRLFNSNQFDGLNH QDGANAIVDKLVSVGAGQKKVNYRLRDWGVSRQRYWGAPIPMITLEDGSVVPAPADQL PVILPEDVIMDGINSPIKSDPQWAKTTVNGLQGLRETDTFDTFMESSWYYARYTCPNY DRGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLMRDAGLVNSDEPAKRLLCQ GMVLADAFYYIGDNGQRIWVSPIDAIVERDNKGRIVKAVDNEGHQLEYTGMCKMSKSK NNGIDPQLMVEKYGADTVRLFMMFAAPAEMTLEWQESGVEGANRFLKRLWRLVFNHVG KGATQELDKTCLNPEQKSLRRDLHKTIAKVTDDIGRRQTFNTAIAAIMELMKQLNNAP QDTESARALMQESLLAVVKMLYPFSPHICFILWQQLRGEGDIDTAPWPVVDQQAMIEE VNLVIVQVNGKVRGKITVPVDAKKEQVYEYACREYSVTKYLDELTKPEVFYVPGKLMN LVTVKTRQVKNETFENK" gene 584079..584540 /locus_tag="REG_0592" CDS 584079..584540 /locus_tag="REG_0592" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92749.1" /translation="MQLFRINLTNLVEEIKKNYSQYDEIRTNLKQVGNTFHKSCPAIT ARKKEFLFNNLNKKIKAVRKIIDHKLATTDKKIIRLKNKNSITIEAAENFIIEGRDSK IVDLLMGENCFWYKLGEKESNRNDLFKAVELFKKQKKYKALLEEINHGIKL" gene 585027..585506 /gene="bcp" /locus_tag="REG_0593" CDS 585027..585506 /gene="bcp" /locus_tag="REG_0593" /inference="protein motif:PFAM:PF00578, PF08534" /note="COG1225; similar to AA sequence EcoGene EG10108; similar to AA sequence GI 157371748" /codon_start=1 /transl_table=11 /product="thiol peroxidase" /protein_id="EFL92750.1" /db_xref="PFAM:PF00578" /db_xref="PFAM:PF08534" /translation="MNTLKAGDNAPEFVLLDQNGLKTSLADIPGKRALIYFYPKAMTP GCTVQACCLRDNMAKLAAANVEVMGISTDKPEKLLRFFEKELLNFTLLSDETHEVAEK FGVWAKKSFMGKTYEGIHRISFLIDEAGKVEKVFDDFKTSNHHDIVLNYLQQKTTSK" gene 585692..587330 /locus_tag="REG_0594" /note="putative M48 domain-containing peptidase; similar to COG4783; similar to GI 170023598; EcoGene EG14199" /pseudo gene complement(587397..587843) /locus_tag="REG_0595" CDS complement(587397..587843) /locus_tag="REG_0595" /inference="protein motif:PFAM:PF00665" /note="COG2801; similar to AA sequence EcoGene EG60037; similar to AA sequence GI 220897843" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="EFL92751.1" /db_xref="PFAM:PF00665" /translation="MVIDLFARKPVGWALSSSPDSELTCKALCMAYESRGRPNGVMFH SDQGCHYTSFTFRRQLWRYRMTQSLSRKGNCWDNAPMERLFRSLKTEWLPKAGYPTGQ QAKQDIIDYLIGYYSQTRPHQYNGGLTPNESERLYWEEHKILANFT" mobile_element 588276..589195 /mobile_element_type="insertion sequence:ISRin1" gene 588346..588783 /locus_tag="REG_0596" CDS 588346..588783 /locus_tag="REG_0596" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92752.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 588792..589169 /locus_tag="REG_0597" CDS 588792..589169 /locus_tag="REG_0597" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92753.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 589678..590136 /gene="osmY" /locus_tag="REG_0598" CDS 589678..590136 /gene="osmY" /locus_tag="REG_0598" /note="COG2823; similar to AA sequence EcoGene EG11391; similar to AA sequence GI 77973615" /codon_start=1 /transl_table=11 /product="periplasmic protein" /protein_id="EFL92754.1" /translation="MKNKKFTYSLIAAALGMASMSGSLFAKPVSNKAENSVEQTGSKI DEVVSKDPAQAERTAAEAAKAGGAKPPSESQSITASAHDAFITTKVKAVLLATSGVPS HDVKVETNSGVVHLSGDVENKEQIEKAQKAIEDKKIDGVKSIKNDLKVKH" gene 590358..591863 /locus_tag="REG_0599" CDS 590358..591863 /locus_tag="REG_0599" /inference="protein motif:PFAM:PF05593" /codon_start=1 /transl_table=11 /product="putative YD-repeat containing protein" /protein_id="EFL92755.1" /db_xref="PFAM:PF05593" /translation="MHNITLHIKLINIQFYLYKKSNNGSSYMNQYLSHTNTLALIAGG PFPTISMQDYRSLNAINKMIVDKTAQLHRYNNDTSSAIGAEKKYKIVDDNAHIHIQEF KDNKLINVFILNYIDDNFIGYEEVINKYDKNNQLVSCSRSTYDINNHFTYRVVSHYNT RGELVNTVKTLFEYDSSDVMTGSLELKYDANNQLIQKVKSKYDLTERGMSIRKREFNY DTKGLMTDSSEAVYDAQGLLTYHTQSEYNANKKMVKQINSEFDYDPKGRLLTENQIHY DADNQPTEYVKNFQDYGTEGRLLKKSTSRYDPKGVLIGTAEVKYQYDANGQLVSQQEA EYDADKKIVGTNSMTFNYDAEGNLLTIRHEFTDQKDKLIHLIESKYDDDNQFIGRSEV DYFYDSEGKLFKKCTEHYDANQKLINSFFLTKENTEAPLTTNATESEVNQSDLLTNAD SKNKEVNLMDTLIAEIHGWANPEKINLFNVMSNVPNAFLPTLPTLLVNRFN" gene complement(592240..596265) /gene="purL" /locus_tag="REG_0600" CDS complement(592240..596265) /gene="purL" /locus_tag="REG_0600" /note="COG0046; similar to AA sequence EcoGene EG10797; similar to AA sequence GI 123441379" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamide synthetase" /protein_id="EFL92756.1" /translation="MNRRLMLSPNALQTRETLLMEILRGSAALSAFKITKLLSRCKDL CLPVDDIYAEYIHFADLSAPLNAEENTKLARLLEYDSSVSPRQATSERVVPGRLLLVT PRLGTISPWSSKASDIAHNCGLSKVLRLERGVAFYIQSVELTSTQWQQLAAMLHDRMV EAVFTDFPSAKEIFPQSASHIPPALKQVDILSQGRTALEHANNQLGLALAKDEIDYLF DSFTRLERNPTDVELYMFAQANSEHCRHKIFNADWVIDGIKQPRSLFNMIKNTFEQTP DYVLSAYKDNAAVMEGSRVGRFFPDAETGIYDYHQEETPILMKVETHNHPTAISPWPG AATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPKFEQPWEEDFGKPDRIATALDI ITEGPLGGAAFNNEFGRPALLGYFRTYEERVKARLKSDNSDENRYELRGYHKPIMLAG GIGNIRADHVQKGEIPVGAKLIVLGGAAMNIGLGGGAASSVTSGQLGAELDFASVQRD NPEMERRCQEVIDRCWQRGDKNPILFIHDVGAGGLSNAMPELVNDAGRGGDFELRAIP SDDPSMSPLEIWCNESQERYVLAVNPDQMKEFDEICQRERTPYAVIGKATAKQDLTVK DSEFNNQPINISLDILLGKPPKMVREVTRLPVCAEALNREKIAIADAVERILHLPTVA EKTFLITIGDRSVTGMVTRDQMVGPWQVPVADCAVTSASLDSYHGEAMSIGERAPVAL LDFAASARLAVGEALTNIAATQIGELKRVKLSANWMSAADHPGEDAGLFDAVRAVGKE LCPELGLTIPVGKDSLSMKTCWQQGDKQREMISPLSLVITAFARVEDVRSTVTPQLQL APEDRDDKKDNNDKNALLLIDLGAGHNGLGATALAQVYRQLGDKAADIRNVSQLAGFF NAMQSLIADRALLAYHDRSDGGLLVTLAEMAFVGHCGIDVNIASLGEDTLAALFNEEL GAVIQVSAQQRSKVEQCLADHGLADCVHYLGRATAGDDFIIRHGNEELYQESRTTLRC WWAETTWQMQRLSDNPECADQEHQAKKDNTDPGLNVKLTFDLNEKIAAPYIAQGIRPK VAVLREQGVNSQVEMAAAFHRAGFDAVDVHMSDLLTGRINLTDFQTLVACGGFSYGDV LGAGEGWAKSILFNNRLRDEFTAFFHHSNTLALGVCNGCQMMSNLRALIPGAEHWPHF KRNLSTRFEARFSLVEVVASPCLFTQDMAGSRLPIVVSHGEGRVAVADKDLTLLEEKN QVVLRFVDNKGICTEQYPANPNGSVKGITALTSTSGRATIMMPHPERVFRTVSHSWHP ADWGEDSPWMRMFRNAGKRFK" gene complement(596590..597570) /gene="motB" /locus_tag="REG_0601" CDS complement(596590..597570) /gene="motB" /locus_tag="REG_0601" /inference="protein motif:PFAM:PF00691" /note="COG1360; similar to AA sequence EcoGene EG10602; similar to AA sequence GI 158327337" /codon_start=1 /transl_table=11 /product="flagellar motor component" /protein_id="EFL92757.1" /db_xref="PFAM:PF00691" /translation="MRGQARSTHTTIIKRSAKKHHAGVHTGAWKVAFADFTLAMMALF MVLWIVGAVSEEERHEIMSHIHGNTIFSNQSFLSIPLKNKNGADKNFEMLHTNKTRDS MKERARENRLKEPFKEPDQIRKEVVDKSATEMQDLSRMVLEISKAHNAQSNLNIEMVP QGLRILIQDDKKREMFPLSSALLTPFFTRLLAELAPVLNDLNNKVIITGHTDGARYRD QELYNNWNLSGERAMAARRALERGGLDDAHILQINAMADQMLLDEKDPLGAANRRIEI MVLTKAATEMLYQFFGDHNPKVIQTDLSDQHTKVIQTDLSDHLTKELKLR" gene complement(597571..598428) /gene="motA" /locus_tag="REG_0602" CDS complement(597571..598428) /gene="motA" /locus_tag="REG_0602" /inference="protein motif:PFAM:PF01618" /note="COG1291; similar to AA sequence EcoGene EG10601; similar to AA sequence GI 209906133" /codon_start=1 /transl_table=11 /product="flagellar motor component" /protein_id="EFL92758.1" /db_xref="PFAM:PF01618" /translation="MQKLLGLIIIMFCVIGGYLMSGGIMSSFWQPGEIIIILGAGMGA MILANPKYVLVEMWQQIKSVVSKNQYTLEFQQQLLLLYELLEMVDEGGLKKLDEHIEI PENSTLFQKYPLILKHKGLVTFISDNFRLMAMGKINEHELEGILEQELGAVEEQLLVP SRSMQRTAEAMPGFGICAAVLGIIITMQSIDGSIALIGIKVAAALIGTFLGVFICYCF MDPLANAMEQEMKKRLSFFECVRIVLVNHVAGKPSLLAVDSGRKMLPLDNKPTFATLD SWINKMEGA" gene complement(598436..599176) /gene="fliA" /locus_tag="REG_0603" CDS complement(598436..599176) /gene="fliA" /locus_tag="REG_0603" /inference="protein motif:PFAM:PF04545,PF04542" /note="COG1191; similar to AA sequence EcoGene EG11355; similar to AA sequence GI 45442811" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis sigma factor" /protein_id="EFL92759.1" /db_xref="PFAM:PF04542" /db_xref="PFAM:PF04545" /translation="MMLLLVKWFFNNSMTMICIDENIALTSLDEGKYLDAYLPLVKRV VRQLSFQADSVLEREDMQQIALMGLLEALRRYGHPDQQFAAYAVHRIRGAILDQLREH DWRPRRLRQKTHKTNEAIRELGKRLGHEPNYDEIAAELSITPQEYQEYLLLENAKAME SLDDLLSLETHNDALQSRELEEQMIIQDSLRQAIGTLDDREKLILSLYYQQELSLKEI ALVLELTEARVCQLNKKIAEKIKKFCSH" gene complement(599142..599471) /gene="fliL" /locus_tag="REG_0604" CDS complement(599142..599471) /gene="fliL" /locus_tag="REG_0604" /inference="protein motif:PFAM:PF03748" /note="similar to AA sequence GI 153947631" /codon_start=1 /transl_table=11 /product="putative flagellar biogenesis protein associated with the basal body" /protein_id="EFL92760.1" /db_xref="PFAM:PF03748" /translation="MRGSKPVQFVEIKNMVITLKNIDDEERYMLLELGIATGDDADVK KVTALTPAIRGATVNLLSGMNYQEIRSFTIADLRQSLMSEYQRNFNELKVPMPFDDVV ISKMVFQ" gene complement(599635..600330) /gene="fliK" /locus_tag="REG_0605" CDS complement(599635..600330) /gene="fliK" /locus_tag="REG_0605" /inference="protein motif:PFAM:PF02120" /note="COG3144; similar to AA sequence EcoGene EG20268; similar to AA sequence GI 51597622" /codon_start=1 /transl_table=11 /product="flagellar hook-length control protein" /protein_id="EFL92761.1" /db_xref="PFAM:PF02120" /translation="MQQSVSSSDAEHDNASALSQNPPLISVETPGRWSTAETKVNLVT ANAKETSDSLIVRSNPTPANPTNVPTTLIAQSNLNHAPAGEGISALEKPFTLTNDKDQ WPQQLRTLLGERLKLQIEKGTQHASIRLDPPEMGKIDISVSVNAGKLQIQINASQGDI YHMLQQSSDELRQNLTSVTTHQVEVQISSGDKQQQQKQRTLESGSHISAAGNMTIEEE QSAGGDGTLLATV" gene complement(600305..600673) /locus_tag="REG_0606" CDS complement(600305..600673) /locus_tag="REG_0606" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92762.1" /translation="MNTPSINSALPSGQKSENKIPIAISKISEAGAVELRETFNDVFT QMGADLSPPLTPASFVSEEIDSPAVVVDPLDFVLAAQGQEKMPHNEAISAKSAVIRDA ISLFATLFSADGDAAICILI" gene complement(600725..601108) /gene="fliS" /locus_tag="REG_0607" CDS complement(600725..601108) /gene="fliS" /locus_tag="REG_0607" /inference="protein motif:PFAM:PF02561" /note="COG1516; similar to AA sequence EcoGene EG11388; similar to AA sequence GI 157147085" /codon_start=1 /transl_table=11 /product="flagellin-specific chaperone" /protein_id="EFL92763.1" /db_xref="PFAM:PF02561" /translation="MYQNQDYRLYQQDDIAAQACVATSHQLVLMLFSALMDELIRTKS HIKAKRYEHKATSVNKCIDIINALTAVLDFDNGGSVAANLARLYDYCVYRLYDASNQL SIELIVEVEGIITNLYNGWQTLGKK" gene complement(601127..602431) /gene="fliD" /locus_tag="REG_0608" CDS complement(601127..602431) /gene="fliD" /locus_tag="REG_0608" /inference="protein motif:PFAM:PF07195" /note="COG1345; similar to AA sequence EcoGene EG10841; similar to AA sequence GI 209906127" /codon_start=1 /transl_table=11 /product="flagellar capping protein" /protein_id="EFL92764.1" /db_xref="PFAM:PF07195" /translation="MDHFNIVRGIMVDSISGFKIDNPEFKKQAEEMAKNQFYAQSVSL KNVSLKNERKIFQAEENRWGEFQKTLETFRADLNVLNNADMVQNSVISSDPQEKYVKI SHDSKAIRSSHTVDVLALASEHKIIYKSLDDDQIAKASGLLTLAINSKSFEIDLSALQ NKTLEGLQQAINTHPDNKGIVALIYRLDGKKTFSLASSESGVANTMSVTSSLLTGGEE RQAQDAHINIDGQATSNPSNQFDDIVSGFSIELKKLTGSSPVSFSLSLDTSATTQQVE KFVQAYNALDAAGNDHIINLKRSCLNEIRELKTRVVQIERSGKLTVDKNLATLLKQNP NALTTIFNGENGLVNRMINKLSVYFDPPKNIKGKSSESFIQLNLRRLAEKDKELTAKE KAHQTALEKFKEESEKRLRQNAINELKNKRFVETHFPSRRNY" gene complement(602618..603532) /gene="lafA" /locus_tag="REG_0609" CDS complement(602618..603532) /gene="lafA" /locus_tag="REG_0609" /inference="protein motif:PFAM:PF00669" /note="COG1344; similar to AA sequence GI 90577369" /codon_start=1 /transl_table=11 /product="lateral flagellin" /protein_id="EFL92765.1" /db_xref="PFAM:PF00669" /translation="MQMSLISGTNKELIGSPFIKEILIMPISSITSTNAHAAIRDSNK EMNIASDKVARNSRNLSPSEEQILNGMKAAASGTRVTLRNLSDATSMLQTMKGELEEV GAIIVKMDDLALQAANDTFSAEEKAAQTKEFNKLGEQLESIFEKSNYRNEKILSEDGL LSREAGLKFQTGTGKDDQLKLNLKEAVKALRDLIKAGDSDALKSLDLAAADVPAKAID ILSKARQQLGNIRAELSVNINLLGHITNSVNNTLKSNTDSQSNLTAINLAEEMENFHN AMQNNDLSLKMLAKKQEAQQSLVRSVLN" gene 604078..605205 /locus_tag="REG_0610" CDS 604078..605205 /locus_tag="REG_0610" /inference="protein motif:PFAM:PF00486" /note="COG3710; similar to AA sequence GI 153948655" /codon_start=1 /transl_table=11 /product="putative transcriptional regulatory protein" /protein_id="EFL92766.1" /db_xref="PFAM:PF00486" /translation="MKKRLYSVNNWRVDLYSGCMTHQYSGETKRLGEYQLKLLDILLQ HAGEILSRDQLTHLVWEKRVIGNNSLPNAIHTLRSALNDNKKQQRIIQTIPKKGYLLD ASYCIAIEKEDHSSANENMPPKNIPFAFEVAARRPGGETDERRQLRDSAIPRSQQCGG FKGEGYNLTDDNNHDADKDQNKPYQDNNSAFQPAEKDRFQLAVTHCPNFSEKKSILVS WWLLAKKIFLLARVKIIFAILLTIAVSGCILFVIDPHNHSSSHFFAEEQKQSLYSHIR LFKIKDPTQRIKNEDDLHDRLKDTLFLLNKNSKTKKMHLSIYYHLSLDKLDYTFVIEN DCKKQQLNMSIYHWRLDNKNLNHLIYRETERKMNEILPCDN" gene 605267..605626 /locus_tag="REG_0611" CDS 605267..605626 /locus_tag="REG_0611" /note="similar to AA sequence GI 22127318" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92767.1" /translation="MTNKKINHLQIGFYDLLSKKKEIYDVKIVINQNTLLSTIVDPND NRFIFKGKFVQKSLPGRPLEYHYTPIFYHNPTSGLMVDGLIDDFTQHNTPPFTPIWVN GQLIMFGQGGIFVDENG" gene complement(605717..606064) /gene="yegP" /locus_tag="REG_0612" CDS complement(605717..606064) /gene="yegP" /locus_tag="REG_0612" /inference="protein motif:PFAM:PF07411" /note="COG3422; similar to AA sequence EcoGene EG14059; similar to AA sequence GI 77974643" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92768.1" /db_xref="PFAM:PF07411" /translation="MINGYYEIKKAKNGQYYFNLKAGNHEIILTSEMYVSKASAENGI ASVQTNSPDEKQYEVKLNVRNEPYFLLKAKNHQVIGKSEFYNSDAAAQKGIASVSRNG KTTDVRDLSDKEL" gene 606422..608317 /gene="mrdA" /locus_tag="REG_0613" CDS 606422..608317 /gene="mrdA" /locus_tag="REG_0613" /inference="protein motif:PFAM:PF03717" /note="COG0768; similar to AA sequence EcoGene EG10606; similar to AA sequence GI 77962171" /codon_start=1 /transl_table=11 /product="transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2)" /protein_id="EFL92769.1" /db_xref="PFAM:PF03717" /translation="MKKKCTSFRDYSAESDLFVRRALIAVFGVLVLSAVLIANLYHLQ ITRFEIYQTRSNENCIKLVPIAPSRGIIYARNGEPLALNRTIYQLELMPEKVENLPAT LKALRPIVELTDEDIANFEKERKRSRRFTSIVLKTPLTEVQVARFAINQFNFPGIEVN GYQRRYYPYGASLTHVIGYVAKINDKEVERLNKEGVLANYAATHDIGKLGIERYYESI LHGKTGYEEVEVNNRGRVIRQLREQPPQAGKDIYLTLDLKLQIHIEKLISGSRAAVVV TDPRSGGILALVSNPSYDANLFVNGISTKNYQTLLNDPNRPLINRATQGVYPPASTVK PYIAVSALSAGVINKNTSLFDPGWWQLPGSEKRFRDWKKWGHGRVNIVKAIEESSDTF FYQIAYDMGINRLSEWMTKFGYGEYTGIDLSEEASGVMPTRECKQKRHKKPWYLGDTI PVGIGQGYWSATPIQMAKVLMTLVNNGVVKSPHLLSNTKIEGVLIPYQQKEQVQMSDI DSQYWEIAKEGMYGVANHPNGTVHKSFADAPYKAAVKSGTAQVYSYETYNASKIAERL RDHKLMTAFAPFNNPRAAVTIVLENGGSGASIGSITRQILDYTLRNDNGAERQLPNTE RPLRDDG" gene 608256..609419 /gene="mrdB" /locus_tag="REG_0614" CDS 608256..609419 /gene="mrdB" /locus_tag="REG_0614" /note="COG0772; similar to AA sequence EcoGene EG10607; similar to AA sequence GI 77962170" /codon_start=1 /transl_table=11 /product="cell wall shape-determining protein" /protein_id="EFL92770.1" /translation="MTTERNVSSPTQKGHYAMTDNHQKQALLSKIHIDIPLLICILLL LAYSAFIMWSASGQDVGMMERKITQIVFGLFTLLLMAQIPPRTYENWAPYLYLICIFL LVLVDVFGQISKGARRWLDLGFIRFQPSEIAKIAVPLMVARFMNRDLCPPSFKNTLIA LILIFTPTLLVATQPDLGTAILIALSGLFVLFLAGMSWRLISVAVLLIAAFIPILWFF LMHDYQHDRVMMLLDPEKDPLGAGYHIIQSKIAIGSGGLFGKGWLHGTQSQLEFLPER HTDFIFAVLAEELGLFGVLVLLVLYLSIIMRGLIIAARAQTTFGRVMIGALMLILFVY VFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIIMSIHSHRKMLSKNL" gene 609634..610817 /gene="dacA" /locus_tag="REG_0615" /note="D-alanyl-D-alanine carboxypeptidase; similar to COG1686; similar to GI 51595441; EcoGene EG10201" /pseudo gene 610841..611104 /locus_tag="REG_0616" CDS 610841..611104 /locus_tag="REG_0616" /inference="protein motif:PFAM:PF04359" /note="COG2921; similar to AA sequence EcoGene EG11592; similar to AA sequence GI 37525260" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92771.1" /db_xref="PFAM:PF04359" /translation="MKTKLNELLEFPCFFTYKVMGIADQKLPDQVVEVVQRYAPGDYA PKVTTSSKNRYHSISITIKVVNIKQIETLYRELANLPLVRVVL" gene 611213..611866 /gene="lipB" /locus_tag="REG_0617" CDS 611213..611866 /gene="lipB" /locus_tag="REG_0617" /inference="protein motif:PFAM:PF03099" /note="COG0321; similar to AA sequence EcoGene EG11591; similar to AA sequence GI 77962166" /codon_start=1 /transl_table=11 /product="lipoate-protein ligase B" /protein_id="EFL92772.1" /db_xref="PFAM:PF03099" /translation="MSTCSPPEHIILRQLELKPYHLVWQAMHDLTEQRKPTTLDEIWL VQHHAIFTQGKAGKAEHLLAPGDIPVFQSDRGGQITYHGPGQQVMYLMIDLNRLKISP RQLITAMEKTVIQTLACFGILSYADAKAPGIYVQQQKICSLGLRIHKGCSLHGLALNV AMDLTPFSSINPCGYANMKMTQVSALVSSPITLEEIQPILVKKFIQQLGYRNLLQLQ" gene 611879..612844 /gene="lipA" /locus_tag="REG_0618" CDS 611879..612844 /gene="lipA" /locus_tag="REG_0618" /inference="protein motif:PFAM:PF04055" /note="COG0320; similar to AA sequence EcoGene EG11306; similar to AA sequence GI 157369438" /codon_start=1 /transl_table=11 /product="lipoate synthase" /protein_id="EFL92773.1" /db_xref="PFAM:PF04055" /translation="MNKPIHIEPGIKYRDADKTALIPVKTVMSEPEPLLAKPDWLKIK LPVDSHRIQAIKAAMRKNGLHSVCEEASCPNLSECFNHGTATFMILGAICTRRCPFCD VAHGRPLAPDSNEPKKLAQTIKDMGLRYVVITSVDRDDLRDGGAQHFADCIAAIRAEN PGIKIETLVPDFRGRMDRALDILVNPPPDVFNHNLENVPRIYRQVRPGATYEKSLKLL KAFKAAHPSIPTKSGLMVGLGETKAEIIEVMQDLRRHDVTMLTLGQYLQPSRHHLPVQ RYVSPSEFDEMKEQATAMGFTHAACGPLVRSSYHADLQAKGVDVK" gene 613234..615033 /gene="lepA" /locus_tag="REG_0619" CDS 613234..615033 /gene="lepA" /locus_tag="REG_0619" /inference="protein motif:PFAM:PF00009" /note="COG0481; similar to AA sequence EcoGene EG10529; similar to AA sequence GI 77963372" /codon_start=1 /transl_table=11 /product="membrane GTPase" /protein_id="EFL92774.1" /db_xref="PFAM:PF00009" /translation="MKLIRNFSIIAHIDHGKSTLSDRLIQICGGLTEREMAAQVLDSM ELERERGITIKAQSVTLNYQAQDGQTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADADRVAQEIEDIVGISAIDAVR CSAKTGVGVADVLERLVRDIPPPTGNIEGSLQALIIDSWFDNYLGVVALIRIKNGTLH KGDKIQVMSTGQSYHADRLGIFTPKRLDRDQLNCGEVGWVVCAIKDILGAPVGDTLTL SHKPAETPLPGFKKVKPQVYAGLFPISSEDYEVFRDALGKLSLNDASLFYEPESSTAL GFGFRCGFLGLLHMEIIQERLEREYNLELITTAPTVVYEIQTTSNEILYVDSPSKLPP LNNIQALLEPIAECHMLLPQEYLGNVIKLCIEKRGVQKNMVYHGNQVALTYDIPMAEV VLDFFDRLKSTSRGYASLDYNFIRFQVADMVRVDVLINSERVDALALITHRDNAQYRG RDLVEKMKEFIPRQQFDIAIQAAIGNHIIARSTVKQLRKNVLAKCYGGDVSRKKKLLQ KQKEGKKRMKQVGNVELPQEAFLAILHVGKNSK" gene 615270..616268 /gene="lepB" /locus_tag="REG_0620" CDS 615270..616268 /gene="lepB" /locus_tag="REG_0620" /inference="protein motif:PFAM:PF00717" /note="COG0681; similar to AA sequence EcoGene EG10530; similar to AA sequence GI 123441362" /codon_start=1 /transl_table=11 /product="signal peptidase I" /protein_id="EFL92775.1" /db_xref="PFAM:PF00717" /translation="MANIFALILAIATLVTGTIWCFERFKWGPARLRKVAAMNATAST LPNSMSNTVESDTLTKMAKQPSWIEHAVSIFPVLALVFVMRSFIYEPFQIPSGSMMPN LLIGDFILVKKYAYGIKDPITQTTLIPTGHPKRGDVAVFKYPLNPRLDYIKRVIGLPG DRISYDPITKQITVQPSCPTGKACDESLSISYSGWQPSDQVQRFRFQGDGDPSSGFFQ IPLNKEISDEEIRLYTNNEHMGSAAYSILAVPGAHDQLGSYYQQGNYPLAQWVVPEGH YFMMGDNRDNSADSRYWGFVPERNLVGKATAIWMSFEKQEGEWPTGVRFNRIASIN" gene 616416..617123 /gene="rnc" /locus_tag="REG_0621" CDS 616416..617123 /gene="rnc" /locus_tag="REG_0621" /inference="protein motif:PFAM:PF00636" /note="COG0571; similar to AA sequence EcoGene EG10857; similar to AA sequence GI 90101642" /codon_start=1 /transl_table=11 /product="ribonuclease III" /protein_id="EFL92776.1" /db_xref="PFAM:PF00636" /translation="MDPIIIKKLETRLGYAFKQRALLVQALTHRSASRTHNERLEFLG DAILNFFIAKALYQRFSDINEGDMSRMRATLVRGKTLAEIAHEFDLSDYLYLGKGELK NGKSPRESILADTVEALIGGIFLDSDIQTTERLLLTWYEKRLAEISPGEKQKDPKTRL QEYLQSHHLPLPSYLVTQVHGEAHEQKFIIHCKFIIPCRENNLTKQEITVRGCGLSRR KAEQAAAEKALIKLELV" gene 617120..618052 /gene="era" /locus_tag="REG_0622" CDS 617120..618052 /gene="era" /locus_tag="REG_0622" /note="COG1159; similar to AA sequence EcoGene EG10270; similar to AA sequence GI 22125198" /codon_start=1 /transl_table=11 /product="GTP-binding protein" /protein_id="EFL92777.1" /translation="MSEKEKQHCGFVAIVGRPNVGKSTLLNALLGQKVSITSRKPQTT RHRIMGIHTEGAYQTIYIDTPGLHIEEKRAINRLMNRAASSAIGDVELIIFVVEGTHW IADDEMVMNKLSHVNCPVLLVINKMDNVTDKAKLLPHIDFLRKKINFIGILPVIAEVS EKKQQVQERKNLDTIADIVRKHMPKAEHHFPEDYITDRSQRFMASEIIREKLMRFLGE ELPYSVTVEIEHFTTNERQGYDINGLILVEREGQKKIVIGDKGAKIKEIGTEARKEME KMFACKVHLELWVKVKSGWADDERALRSLGYGDD" gene 618360..619118 /gene="pdxJ" /locus_tag="REG_0623" CDS 618360..619118 /gene="pdxJ" /locus_tag="REG_0623" /inference="protein motif:PFAM:PF03740" /note="COG0854; similar to AA sequence EcoGene EG10693; similar to AA sequence GI 77978405" /codon_start=1 /transl_table=11 /product="pyridoxine 5'-phosphate synthase" /protein_id="EFL92778.1" /db_xref="PFAM:PF03740" /translation="MVMTDLRLGVNIDHIATLRNARGTNYPDPIFAAGIAEQAGADGI TVHLREDRRHITDPDVELLRKTISTRMNLEMAVTKEMIDNACQLKPHFCCLVPENRQE ITTEGGLNVVDQLETITAAVERLSAVGIQVSLFIDADNDQIDAAVKTGTPYIEIHTGA YAEAAELDRDNELERITKAARYATAQGLKVNAGHGLHYHNVKSIAALPEIHELNIGHA IISRAVITGLDAAIRDMKQLMREARHCSTANSRS" gene 619151..619531 /gene="acpS" /locus_tag="REG_0624" CDS 619151..619531 /gene="acpS" /locus_tag="REG_0624" /inference="protein motif:PFAM:PF01648" /note="COG0736; similar to AA sequence EcoGene EG10247; similar to AA sequence GI 77978404" /codon_start=1 /transl_table=11 /product="phosphopantetheinyl transferase (holo-ACP synthase)" /protein_id="EFL92779.1" /db_xref="PFAM:PF01648" /translation="MAILGLGTDVVEIQRIASIVERNGEKLARRILHPSELQCYLQHS QAVRFLAKRFAVKEAAAKALGTGMRDGVAFNQFELINDSLGKPILYLHRRALTLANQR GMKFLHVSITDERHYACATVIIEG" gene 619500..620045 /gene="tadA" /locus_tag="REG_0625" CDS 619500..620045 /gene="tadA" /locus_tag="REG_0625" /inference="protein motif:PFAM:PF00383" /note="COG0590; similar to AA sequence EcoGene EG11372; similar to AA sequence GI 153948638" /codon_start=1 /transl_table=11 /product="CMP/dCMP deaminase" /protein_id="EFL92780.1" /db_xref="PFAM:PF00383" /translation="MLALPLLSKASPGQSKNIKIMILTEHNDEHWMAAALKLAARAQA AGEVPVGAVLVLQNKIIGEGWNQPIIHHDPSAHAEIMALRQAGQQQKNYRLPDATLYV TLEPCVMCAGAMIHSRISRLVYGANDNKIGAVGALTLLNHPAMNHQVEITAGVLVDAC SQMLSTFFSQRRQQQKAQKMG" gene complement(620414..621547) /locus_tag="REG_0626" CDS complement(620414..621547) /locus_tag="REG_0626" /note="COG2931; similar to AA sequence GI 27366913" /codon_start=1 /transl_table=11 /product="putative RTX-like protein" /protein_id="EFL92781.1" /translation="MISHFINAHPVLIRSYISEVELSQIIDREHQTSSQITIDYAVPI VMNRTGSTVKMYDFIELSPSLTPSDLISENLGNHHQQAGAHYPVPASSVVVSGLLSAP GQVERDNVADWAKPTVNPQQTVVGGERKSRVIIQLENDDISLRAASDLAGKHPNEAVI YQRDKQGNLRLVYGEPAALAGALSLFFVGHGRGGEHDAHDNTTLAGYSAPELAAVTQQ IHQELRTQFPHAVPENIDKLLLIGCALVNDEKTDGFLFKMAPELLKRGMHPGEIVGYA TEIGISRAVSEQGRGRRRYPSMTPERGDVSARNVRVSLRRDETGTRYLPQNRQQRPAS KNSPLASQESTLHQVVETVQDRQAIISSDKNLIKGVDRAKERR" gene complement(621602..621913) /locus_tag="REG_0627" CDS complement(621602..621913) /locus_tag="REG_0627" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92782.1" /translation="MPGATRNIRNYYYSNERRFSGANFAHQIAVVNPNNHEEMRMACR WLSEDSRYRTLVDINGNLYSTNGNRLGGENATLAQKIANHEMQMLPGQKKVRLLFVGK K" gene complement(621940..623115) /locus_tag="REG_0628" CDS complement(621940..623115) /locus_tag="REG_0628" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92783.1" /translation="MLQAVEQSGAGMSLSLIEPGKKDAAGYHSIAGWRVMDVPIVIPE VQPLHENNQERYYQPGYLGLEKEEKRALEILQALHPDQDAMTLWRSFNMGGELRQRFR AELMSTGRIPPWAEEHRRTSIDPNNLHIFEHIRQLSNAMLAKLIKYPDLSMSNFSSSD TLIDSFDRAFLRSFTQSRGYQRNAMGALFRTDIRGVFRGDHRTPYELSQDKYMLGFGD NFYTQHTSGNTLYTSSVYQDAFQYGRINPGGASQFHYGYQDDEEYYSFVDSDDSDDER SEPLRQRQRDGFVYLLDTRGLEAIPVADNMLLNPNNTVTNDLVVAGEIHVSVPLEGIS FDRIWLVSSDGQRAVRVSDIAQHDDFDNELRDLSERTFAGANSDIYDGIFTRLRGKG" mobile_element 623117..624036 /mobile_element_type="insertion sequence:ISRin1" gene 623187..623624 /locus_tag="REG_0629" CDS 623187..623624 /locus_tag="REG_0629" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92784.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene 623633..624010 /locus_tag="REG_0630" CDS 623633..624010 /locus_tag="REG_0630" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92785.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene 624421..626736 /gene="rlmL" /locus_tag="REG_0631" CDS 624421..626736 /gene="rlmL" /locus_tag="REG_0631" /inference="protein motif:PFAM:PF02926" /note="COG1092; similar to AA sequence EcoGene EG13717; similar to AA sequence GI 77979207" /codon_start=1 /transl_table=11 /product="23S rRNA m(2)G2445 methyltransferase" /protein_id="EFL92786.1" /db_xref="PFAM:PF02926" /translation="MDPLLPSISNKKGLNKLFASTAQGLEELLKNELQDLGADNSKVV QGGVYFQADDRLLYRTLLWSRLASRIFLPLNEFQVNDDQDLYLGAQAIDWPAIFTVDK TFVVHFTGVNHAIQNSQYGALKVKDAIVDRFISKVKQRPSVTKQQPDISIHVFLRRDI PTALEVAARRPECETDERRQLRDSANTRSQQRGGFKGEGYKVVISLDLSGNSLHQRGY RDSSGGQAPLKENLAAAIILRAGWQKGTPLIDPMCGSGTLLIEAAMMATDHAPGLHRQ QWGFSAWRDFNHSLWSELMSEAQARASKGLKTTPAYFFGADADPQTIKIARANAERAG VASLIRFQPQDLSQLANPWPTAPAGCVISNPPYGERLESEPVLIALYNLLGRIMKTAF AGWRLSLFSASPTLINCVQLRAEREFKAKNGALDCIQKNYQLSAYSEQAGQKETLHLA KDFANRLGKNKHKLDKWAQQQGIECYRLYDADLPEYNVAIDRYGSKIVLQEYAAPKTI DAKKARQRLFDAIHATLQVLAIPANQLVIKTRERQKGKNQYQKLAQRDEFFLVQEYNA KLWVNLTDYLDTGLFLDHRITRQMLGKMSQGKDFLNLFAYTGAASVHAGLGGAKSTTT VDMSHTYLAWAEKNLRTNGLTGRQHRLIQADCFAWLDQRLDHPTAQFDVIFIDPPTFS NSKRMANTFDVQRDHLPLMKAIKPLLRRNGTMIFSNNRHGFKIDVDGITALGLTIKEI TAKTQSPDFARHRQIHHCWLITHTGEEKLCH" gene 626727..628640 /gene="uup" /locus_tag="REG_0632" CDS 626727..628640 /gene="uup" /locus_tag="REG_0632" /note="COG0488; similar to AA sequence EcoGene EG13134; similar to AA sequence GI 186894864" /codon_start=1 /transl_table=11 /product="ATP-binding protein with possible role in replication" /protein_id="EFL92787.1" /translation="MSLISLSGAYLSFSDAPLLDNTELHIEANERLCLVGRNGAGKST LLKVLNKEMELDSGQIIYAQDLVVSRLQQDPPRNVEGTVFDFVAEGVAQQAKHLQAYH ATLRLIERDPSEKNLQQLSALQDILDHQDLWQLDNRIHEVLEQLGLSAEALLSSLSGG WLRKAALGRALVSSPQLLLLDEPTNHLDIKTIDWLEGFLKEFQGSMVFISHDRAFIKA MATRIVDLDRGKLVSWPGNYQQYLASKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA RRTRNEGRVRALKALRETRSQRREVMGTAKMQVEETLRSGKMVFELEKVNYQIGDSPL VKNFTAQVQRGDKIALVGANGCGKTTLLKLMLGQLKADSGKIHCGTKLEIAYFDQHRA KLDPERTVMDNLAEGKQEVIINGRSRHVLGYLQDFLFHPKRALSPVKALSGGERNRLL LAKLFLKPSNLLILDEPTNDLDVETLELLEERVDSYQGTVLLVSHDRQFVDNSVTECW IFEGGGQIAKFVGGYSEAHQQRAASRPLGQTTKAQTVKTMPAAKNDTVKKETKQQANK LSYHLQKELDQLPEKVEQLETKISQLQAQISDPSFFTKAYEETQPLLKMLAETEQALA EAFNRWEYLEAQQ" gene complement(629057..629689) /locus_tag="REG_0633" CDS complement(629057..629689) /locus_tag="REG_0633" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92788.1" /translation="MLQSLLRRLQRGLWYAAGAVAATETAKSAVVVVKNVAEVVESVT GKIDDNITKTCTLLNEEEIGGAINDAFQDAFQGGLFGSTETADPFEKPAESVNHMDDD DDNDEASAPAMSAWTQTTKAIFSGFFGGDGISRAFEGLGMDDTEDPFETSAENANDMD DDDYYDAEEEVSGWERANTTKTDAPFETPADDAKETPAASIWTKMVTAGC" gene complement(629547..630542) /locus_tag="REG_0634" CDS complement(629547..630542) /locus_tag="REG_0634" /inference="ab initio prediction:Glimmer:3.02" /note="weak similarity to tccC" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92789.1" /translation="MTAATYLGVSVVTLLLGTLFPPILPVSLAGLLLLSGLYFVVSYW APELSEKMATAAAKLAEGQSEATQAKIGAGQEAATALINGGSQTVAAMTAGVGYILGW FGAKTNQTKRASAAINAGAVAAAHTEQISYQCNNPPIAQLSSTLSASIVAAFFGIDGS SKIGMAAADGAVLGDKWAAFLTCLSYGDIRGSLMLLAGHKMVDVGLSFLPKGIEKSTI QEYAGPVLKNAINVLCLDLKSQVIIMILPAVTSTMLATWCAFQQKPEGWLKQKMEQGR ASALAAAKNVAESATETAKGAVVCGRGCGCYRDRKECCSGSKECCRGGRKCYRED" mobile_element complement(630570..631488) /mobile_element_type="insertion sequence:ISRin1" gene complement(630596..630973) /locus_tag="REG_0635" CDS complement(630596..630973) /locus_tag="REG_0635" /note="COG3293; similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfB" /protein_id="EFL92790.1" /translation="MLVDKKSKAVICTSFTNGRRHDFRLFKESGVRIHPDIKTVTDTG YQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRALSSQRVLNEHVIGMIKRFKIVSDRY RNRRKRFGLRFNLIAAIYNMEIR" gene complement(630982..631419) /locus_tag="REG_0636" CDS complement(630982..631419) /locus_tag="REG_0636" /note="similar to AA sequence GI 189502478" /codon_start=1 /transl_table=11 /product="ISRin1, transposase orfA" /protein_id="EFL92791.1" /translation="MKYEVIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKSKQGKGG RKPKRGLEERLLMALEYIREYRTYFHVSQSYGVSESTCYETIKWIENTLIKHPDFALP GRKAVLKRDREYELVLIDATETPIERPQKNKSRFTQEKRNDTP" gene complement(631561..632205) /gene="lolA" /locus_tag="REG_0637" CDS complement(631561..632205) /gene="lolA" /locus_tag="REG_0637" /note="COG2834; similar to AA sequence EcoGene EG12684; similar to AA sequence GI 77958330" /codon_start=1 /transl_table=11 /product="outer-membrane lipoprotein carrier protein" /protein_id="EFL92792.1" /translation="MKITKRGRALLCSGLFFCHAIVIGFMSTPVWADARQNLQTRLAK VNSFYATFSQQVTSAEGDVVQQGAGELWIKRPNLFNWHITSPDESVLISDGETLWFYT PLVEQATATWLKDATDNTPFILMTRNNLNDWRQYNVKQQNDDFELTPKKAKGNLEKFT ISVTTSGMIKTFTLIEQSGQRSAYRLQDQKNTEVDMSKFTFTLPKEVTLDDQRQ" gene complement(632275..634830) /gene="ftsK" /locus_tag="REG_0638" CDS complement(632275..634830) /gene="ftsK" /locus_tag="REG_0638" /inference="protein motif:PFAM:PF01580,PF09397" /note="COG1674; similar to AA sequence EcoGene EG13226; similar to AA sequence GI 123441837" /codon_start=1 /transl_table=11 /product="DNA-binding membrane protein required for chromosome resolution and partitioning" /protein_id="EFL92793.1" /db_xref="PFAM:PF01580" /db_xref="PFAM:PF09397" /translation="MNQEYIQNNTMPAKKPTVRRRFFLKAWLIMMVLFAGYLMVSLIS FNPSDPSWSQTAWHEPIHNLGGGVGAWLADMLFFIFGIVAYVIPLLGVTFCQIVLRHK KKSNEPFDYFFISLRLIGSLALVLSACSLAALSIDDLYYFPSGGVIGSLFGNLMLLNF NSTAGTVCLLFIWGAGLTLFTGWSWLLIAEKIVWVVLNGLHFICDYRHKKGYRHQSAE LAVSPTAISPTAIEQTTITDDDRLFSLSSSAKNEISSEIKEINEVKEVKEEEPSACFL DEPPLTSETSLTDEANKAKLPSIEFFTAPKENIENAPVAQSDEATLSSDNTKMADEAV ASVPETLPDTLIHPFLMRNDSPLVKPTTPLPTFDLLSSPSSEKPQVDREALKQTALLV ETRLADYRVKAKVVGISPGPVITRFDLDLAPGVKAARISSLSRDLARSLSAIAVRVVE VIPGKPYVGLELPNPYRQTVYLREVLDCPVFRETRSPLAMVLGKDIAGQPVVADLAQM PHLLVAGTTGSGKSVGVNAMILSILYKATPDEVRFIMIDPKMLELSVYEGIPHLLTQV VTDMKDAANALRWCVAEMERRYKLMSALGVRNLANYNERVLQAENMGRPIPDPFWKPK ESMGLSPPMLEKLPYIVVMVDEFADLMMTVGKKVEELIAQLAQKARAAGIHLVLATQR PSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAVAESLLGMGDMLYMAPNSSIPIR IHGAFVRDQEVHAVVNDWKARGRPQYIENILSESEENEGGNSAGGEETLDPLFDQAVN FVLEKRRASISAVQRQFRIGYNRAARIIEQMEAQQIVSAPNHSGNREVLAPEG" gene complement(634865..635355) /gene="lrp" /locus_tag="REG_0639" /note="leucine-responsive DNA-binding transcriptional dual regulator; similar to COG1522; similar to GI 212708158; EcoGene EG10547" /pseudo gene complement(635507..637000) /gene="icd" /locus_tag="REG_0640" CDS complement(635507..637000) /gene="icd" /locus_tag="REG_0640" /inference="protein motif:PFAM:PF00180" /note="COG0538; similar to AA sequence EcoGene EG10489; similar to AA sequence GI 50121366" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /protein_id="EFL92794.1" /db_xref="PFAM:PF00180" /translation="MTNEAIIPPIPPGDRKFTGGSQGTFENKVVAPSVGKKIRYETDG KLWVPDNPIIPFIEGDGIGVDVTPAMIKVVDAAVEKAYKGKRKIAWMEIYAGEKAKKI YQKDIYGNDTWLPAETVGLIREHIVAIKGPLTTSVGGGIRSLNVSLRQELDLYICLRP VRYFDGVPSPLKNPELTDMVIFRENSEDIYTGIEWKAGSAEADKLMKFLCCEMEVAES KFLCKQGTAHDFSKKCWFGMKFCSFFCSLFCKKGAVHNSLCRCLIKKNYVHNFSKECG LGVKFCTKEGTQRLVRAAIQYAIDHDRQSVTLVHKGNIMKFTEGAFKNWGYQLACEEF GASPLEGGAWMKIQNPKNGKDILIKDVIADAFLQQILLSPEKYDVIACMNLNGDYISD ALAAQVGGIGIAPGANIGDRCALFEATHGTAPKYAGKNKANPGSIILSAEMMLRHMDW NEAADLMIKGITNAIKNKTITYDFARFTQDAQERKCSEFADDIIENM" gene 637149..638252 /gene="mnmA" /locus_tag="REG_0641" CDS 637149..638252 /gene="mnmA" /locus_tag="REG_0641" /note="COG0482; similar to AA sequence EcoGene EG11344; similar to AA sequence GI 153950153" /codon_start=1 /transl_table=11 /product="putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase" /protein_id="EFL92795.1" /translation="MSDHSQKKIIVGMSGGVDSSVAAYLLKQQGYQVAGLFMKNWEED DNDTYCGAAKDLADAQAVCDKLNINLHRVNFAAEYWDNVFKLFLAEYQAGRTPNPDIL CNKEIKFNAFLSFACEELEADYIATGHYVRRHTSAGKNCLLRGLDDNKDQSYFLYTLN QQQLARSLFPIGDLKKSEVRNIAEQLNLITAKKKDSTGICFIGERKFRDFLARYLPAQ PGSIISVDGQDLGQHHGLMYHTLGQRKGLGIGGIKEGNGAPWYVVDKNIATNTLLVAQ DHKHAKLMSHGLIAQQLSWIDLPSLTFPLRCMVKTRYRQQDIPCTVFSKAENSIEVRF EQPIVAVTPGQSAVFYQGDICLGGGIIEQRLQT" gene 638494..639025 /locus_tag="REG_0642" /note="hypothetical protein; similar to COG2915; similar to GI 77980027; EcoGene EG11345" /pseudo gene 639028..640542 /gene="purB" /locus_tag="REG_0643" CDS 639028..640542 /gene="purB" /locus_tag="REG_0643" /note="COG0015; similar to AA sequence EcoGene EG11314; similar to AA sequence GI 77959454" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="EFL92796.1" /translation="MATVRRRTLTINVSPSSVAQTGTDYSRPHSIKPGVIPMKLSSLT ALSPIDGRYSNKVDTLRAIFSEFGLLKFRVQVEVGWLQTLAACQEIDEISAFTPQAIT SLNHIVDTFNEQDAERIKAIEITTNHDVKAVEYFLKEKVAAMDELKAVSEFIHFACTS EDINNLCHALMLKTARQDIILPQWKMIISAINTLAQENREVALLSRTHGQPATPSTVG KEFANVVHRLQRQYAQLEKIAILGKINGAVGNYNAHLAAYPALNWHQFSENFVKSLGI SWNPYTTQIEPHDYIAELFDCIARFNTILIDFDRDIWGYVALNHFKQKSIAGEIGSST MPHKINPIDFENSEGNLGIANAILGHLARKLPLSRWQRDLTDSTVLRNLGVGLAHSLI AYQATLKGIKKLEVNTEHLSTELNNNWEVLAEPIQTVMRRYGIEAPYEKLKALTRGKK IARQDIHKFIEGLALPEEEKIRLKHMTPLNYIGQAVDLVNELVKNSNQPNDDVG" gene 640649..641844 /gene="phoQ" /locus_tag="REG_0644" /note="sensory histidine kinase in two-compoent regulatory system with PhoP; similar to COG0642; similar to GI 4103329; EcoGene EG10732" /pseudo gene complement(642003..643283) /gene="lolE" /locus_tag="REG_0645" CDS complement(642003..643283) /gene="lolE" /locus_tag="REG_0645" /note="COG4591; similar to AA sequence EcoGene EG13441; similar to AA sequence GI 123442015; overlaps another CDS with the same product name" /codon_start=1 /transl_table=11 /product="membrane component LolE of outer membrane-specific lipoprotein transporter" /protein_id="EFL92797.1" /translation="MFAWPLSFLIALRFSCGRRARGGDKTNANAGNPILSLLSVISTL GITLGVAVLILGLSAMNGFERELKNRVLAVVPHGKIAFVEQPFNRWPSLLERIEQVTG IIAAAPYIEFTGLIESGSQLRAVQIKGVDPQAEKKLSALPHFMINSAWDDFRAGEQQI ILGKGLADALGVTQGAWLTLMISNNDPSMKLLQPKRIRLRVAGLFQLSGQLDHSLAML PLVHAQKYLEMGQSVTGIAIKVSDVFNAHQLTRDAAEVTQAYVQFSSWMGTYGYMYRD IQMIRSIMYLAMILVIGVASFNIVSTLVMAVNDKSRDIAILRTLGAKDSLIRAIFIWY GLLTGLVGSLSGVIMGSVIALKLTAIISQFEKWLGRSFLSGDIYFIDFLPSELHASDV IYVLITAILLSLLASWYPARCASRVDPVRVLSGR" gene complement(643283..643990) /gene="lolD" /locus_tag="REG_0646" CDS complement(643283..643990) /gene="lolD" /locus_tag="REG_0646" /note="COG1136; similar to AA sequence EcoGene EG13440; similar to AA sequence GI 123442014; overlaps another CDS with the same product name" /codon_start=1 /transl_table=11 /product="ATP-binding component LolD of outer membrane-specific lipoprotein transporter" /protein_id="EFL92798.1" /translation="MNSPLQNKNFLQCENLCKSYQQGALSTEVLRNVTFTMQPNEMMA IVGSSGSGKSTLLHLLGGLDSPTSGEVIYRDRFIHRLSSSMKAELRNTELGFIYQFHH LLPDFTALENVAMPLLIAGKNAKYAQDKANAMLVEVGLASRGHHRPAELSGGERQRVA IARALVNHPSLVLADEPTGNLDQYNADSIFNLLMELNARQGTAFLVVTHDLQLAKRLH RQLEMRDGHLQLPTEAQ" gene complement(643983..645185) /gene="lolC" /locus_tag="REG_0647" CDS complement(643983..645185) /gene="lolC" /locus_tag="REG_0647" /note="COG4591; similar to AA sequence EcoGene EG13439; similar to AA sequence GI 108807894; overlaps another CDS with the same product name" /codon_start=1 /transl_table=11 /product="membrane component LolC of outer membrane-specific lipoprotein transporter" /protein_id="EFL92799.1" /translation="MHQPISLFIGLRYLRGRTSNGFGRFVSWLSTIGITLGVMALVLV LSVMNGFERDLQNNILGLMPQVLITTKQGSLNPNEISAATLQGLQGVTNIVPLTTAEV VLQSNHHVGVAVMLGIDPQQYEPLTQFLVNADKEVLQPGKYNLILGGRLAEQLGVRQG DTLRLMVPNASQFTPLGRIPSQRLFNVSGIFVADSEVDEYQLLLNQQDASRLMHYAPG NITGWRLFLAHPLAVDSLKNQPLPAGTIWKDWRSRKGELFQAVRMEKNMMGLLLSLII TVAAFNIITSLGLLIMEKQGEVAVLQTLGLKRGKIMMVFMVQGASAGIIGALLGAMMG VGIVSQLANIVPMLGLLMEGALLPVAIDPLQVALIALLTMLIALLATFYPAWRAAAAQ PAEALRYE" gene 645395..648892 /gene="mfd" /locus_tag="REG_0648" CDS 645395..648892 /gene="mfd" /locus_tag="REG_0648" /note="COG1197; similar to AA sequence EcoGene EG11619; similar to AA sequence GI 77963636" /codon_start=1 /transl_table=11 /product="Transcription-repair coupling factor (superfamily II helicase)" /protein_id="EFL92800.1" /translation="MKDEGYISRTEMIQLFMSQSIIDKQYRYLLPQQPNDKRQIGQLV GSAYAIECAEIIERHPGLVILITTDMQSALRLRDEIPQFTKQPIAILADWETLPYDSF SPHQDIISARLSSLYQLPIMNSGALILPINTLMQRVCPYQFLQAHALVMKTGQQLSRD KLRAQLEQAGYRSVDQVIEHGEFASRGALLDLYPMGSNEPYRIDFFDDEIDSLRLFDV DTQRTLAEVKQINLLPAHEFPIDQNAIELFRSQWREHFEIRREAEHLYQQVSKGIWPA GIEYWQPLFFSQPLPTLFSYFPNNTLLITIGDLESAATEFWRNLNQRYESRRVDPMRP LVAPDKLWINSDTLFSQLKAWPRIQLKQDKLATKSANTNLSYQALPELAVKSGQKKPL DNLHRFSETFTGSIVFSVESEGRKEILLDLLTPIKLHPTLITQLCQASQPGHYLMIGE AEQGFLDQERQLAFICESDLLGKRVNRRQQDNRRTINTDSLIRSLAELRPGQPVVHLE QGVGRYQGMTTLEAGGIKAEYLILSYAEQDKLYIPISSLHLISRYCGGSEQDAPIHKL GGDVWQRARQKAAEKIRDVAAELLDTYSQRAAKPGFQFQQDHQQYRLFCQDFPFDTTP DQEKTINAVLNDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAIVNKKQTAVLVPTTLL AQQHFDNFRDRFATWPVKIEMLSRFRRPKEQQAIFQQAYEGKIDILIGTHKLLQPHLH WKDLGLLIVDEEHRFGVRHKEQIKAMRTDVDILTLTATPIPRTLNMAMSGMRDLSIIA TPPARRLAVKTFVREYDELLLREAILREILRGGQVFYLYNDVEKIEGVATKLAELVPE AHIAIGHGQMRERDLERVMNDFHHQRFNILVCTTIIETGIDVPNANTIIIERADRLGL AQLHQLRGRVGRSHHQAYAYLLTPNIKSDAKKRLEAIASLEELGAGFALATHDLEIRG AGELLGEDQSGQMTTIGFSLYMEMLENAVNALKEGREPSLENLTRQQTEIEMRMPVLL PDDFIHDVNIRLSFYKRIANASDDTELNELKVELIDRFGKLPDATNYLLQTASLGKRA QKLGIKRIESNEQGGFIEFDINHQVDPAYLIELLQNQRHIYRLDGASKLKFIQDLSNR RQRLKFVEEVLNNFEQHLL" gene complement(648933..649343) /locus_tag="REG_0649" CDS complement(648933..649343) /locus_tag="REG_0649" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92801.1" /translation="MYGQASVFNGAWIYGSAWARDQTQIQGEARVYGRARVMGRASAS GQSHIFSTAQLCGDVILEDKTRIGDQARVASNAHYLTVWLIGQRQHAVTAFKRQDGTI GVHGDGFNITLDQFLDTIFLANTLTVQKVAIISI" mobile_element 649442..650331 /mobile_element_type="insertion sequence:ISRin2" gene 649507..649860 /locus_tag="REG_0650" CDS 649507..649860 /locus_tag="REG_0650" /note="similar to AA sequence GI 30249526" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfA" /protein_id="EFL92802.1" /translation="MTYPLKFRQHVLAFKKKEALTYAETADRFGVGSASLMRWAKRLE PCLTRNKPATKINRAALILDVETYPDASQHERAPRMGVSARGICDALKRAGFSYKKNI LSPQSRRPSSKRFSD" gene 649875..650306 /locus_tag="REG_0651" CDS 649875..650306 /locus_tag="REG_0651" /note="COG3335; similar to AA sequence GI 77163617" /codon_start=1 /transl_table=11 /product="ISRin2, transposase orfB" /protein_id="EFL92803.1" /translation="MDESGFAHDMPRLYGYSVKGKRCYGQHDCHAKARTNVIGAQLNG KLTTVCTFDCHINSDIFYAWVTQDLLPKSPPGAVLVMDNVRFHKRQDIQTAIQKAGFI LEYLPTYSPDMNPIEHKWAQAKALRRKRLCDIDTLFSDPLF" gene 650307..650750 /gene="speD" /locus_tag="REG_0652" /note="S-adenosylmethionine decarboxylase; similar to COG1586; similar to GI 51595069; EcoGene EG10962" /pseudo gene complement(650836..650911) /locus_tag="REG_0653" /note="tRNA-Lys2" tRNA complement(650836..650911) /locus_tag="REG_0653" /product="tRNA-Lys" gene complement(650938..651013) /locus_tag="REG_0654" /note="tRNA-Val2" tRNA complement(650938..651013) /locus_tag="REG_0654" /product="tRNA-Val" gene 651764..652270 /locus_tag="REG_0655" CDS 651764..652270 /locus_tag="REG_0655" /inference="ab initio prediction:Glimmer:3.02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="EFL92804.1" /translation="MVDYDNEDFVSIHFDENANTTDTEHLLTKTNAKNGIDDCYIKNV LLKEVSRYGKPVTRLKLIAWLAEKLFGIYGVGQTNSASCAKSVVDTVQTKILHRAMPK AKEADATELGIKNMELKCCGSIQQLAIKLAKNKKNINGVLVIPQNTSWGVLFPPDTRA YLQCCDHQ" CONTIG join(ACYF01000169.1:1..4909,gap(29),ACYF01000170.1:1..3871,gap(27), ACYF01000171.1:1..1876,gap(30),ACYF01000172.1:1..5500, AC202193.1:1..62969,GU556159.1:1..483,AC202193.1:63485..102328, complement(AC202195.2:38420..73183), complement(AC192956.2:1..95848),AC200763.1:21010..96078, ACYF01000173.1:2716..3615,gap(29),ACYF01000174.1:1..1592, gap(unk100),GU556155.1:1..150,AC201870.1:150..69507, GU556156.1:1..574,AC201870.1:70260..115304, complement(AC203073.1:8206..104910),ACYF01000175.2:1..11600, gap(unk100),complement(AC202208.4:748..101573), ACYF01000176.1:1..1074) //