LOCUS GL192345 5331620 bp DNA linear CON 24-JUL-2016 DEFINITION Ailuropoda melanoleuca unplaced genomic scaffold scaffold575, whole genome shotgun sequence. ACCESSION GL192345 ACTA01000000 VERSION GL192345.1 DBLINK BioProject: PRJNA38683 BioSample: SAMN00008160 KEYWORDS WGS. SOURCE Ailuropoda melanoleuca (giant panda) ORGANISM Ailuropoda melanoleuca Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda. REFERENCE 1 (bases 1 to 5331620) AUTHORS Li,R., Fan,W., Tian,G., Zhu,H., He,L., Cai,J., Huang,Q., Cai,Q., Li,B., Bai,Y., Zhang,Z., Zhang,Y., Wang,W., Li,J., Wei,F., Li,H., Jian,M., Li,J., Zhang,Z., Nielsen,R., Li,D., Gu,W., Yang,Z., Xuan,Z., Ryder,O.A., Leung,F.C., Zhou,Y., Cao,J., Sun,X., Fu,Y., Fang,X., Guo,X., Wang,B., Hou,R., Shen,F., Mu,B., Ni,P., Lin,R., Qian,W., Wang,G., Yu,C., Nie,W., Wang,J., Wu,Z., Liang,H., Min,J., Wu,Q., Cheng,S., Ruan,J., Wang,M., Shi,Z., Wen,M., Liu,B., Ren,X., Zheng,H., Dong,D., Cook,K., Shan,G., Zhang,H., Kosiol,C., Xie,X., Lu,Z., Zheng,H., Li,Y., Steiner,C.C., Lam,T.T., Lin,S., Zhang,Q., Li,G., Tian,J., Gong,T., Liu,H., Zhang,D., Fang,L., Ye,C., Zhang,J., Hu,W., Xu,A., Ren,Y., Zhang,G., Bruford,M.W., Li,Q., Ma,L., Guo,Y., An,N., Hu,Y., Zheng,Y., Shi,Y., Li,Z., Liu,Q., Chen,Y., Zhao,J., Qu,N., Zhao,S., Tian,F., Wang,X., Wang,H., Xu,L., Liu,X., Vinar,T., Wang,Y., Lam,T.W., Yiu,S.M., Liu,S., Zhang,H., Li,D., Huang,Y., Wang,X., Yang,G., Jiang,Z., Wang,J., Qin,N., Li,L., Li,J., Bolund,L., Kristiansen,K., Wong,G.K., Olson,M., Zhang,X., Li,S., Yang,H., Wang,J. and Wang,J. TITLE The sequence and de novo assembly of the giant panda genome JOURNAL Nature 463 (7279), 311-317 (2010) PUBMED 20010809 REFERENCE 2 (bases 1 to 5331620) AUTHORS Wang,J., Li,R., Fan,W., Tian,G., Zhu,H., Huang,Q. and Li,J. TITLE Direct Submission JOURNAL Submitted (09-JUL-2009) Sequencing and Bioinformatics, Beijing Genomics Institute at Shenzhen, Beishan industry zone, Yantian district, Shenzhen, Guangdong 518000, China COMMENT Assembly Method: SOAPdenovo Assembly Name: AilMel_1.0 Genome Coverage: 60x Sequencing Technology: Illumina GA. FEATURES Location/Qualifiers source 1..5331620 /organism="Ailuropoda melanoleuca" /mol_type="genomic DNA" /submitter_seqid="scaffold575" /db_xref="taxon:9646" /chromosome="Unknown" /sex="female" /geo_loc_name="China: Chengdu province" assembly_gap 2651..2718 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<6129..>116935) /locus_tag="PANDA_000398" mRNA complement(join(<6129..6284,7541..7676,11522..11697, 12896..13046,22125..22297,23172..23360,28196..28333, 28775..28936,31292..31462,31769..31897,34390..34569, 39474..39644,46173..46328,48216..48389,49082..49210, 49649..49810,51101..51250,53291..53425,57495..57674, 59646..59816,63816..63971,64631..64744,78558..78770, 79430..79575,82108..82288,82453..82694,88299..88386, 91805..91928,95433..95602,96466..96645,96928..97035, 99954..100055,101704..101823,102955..103105, 104029..104210,105333..105536,109240..109400, 110074..110189,112550..112722,114827..114919, 115273..115350,116843..>116935)) /locus_tag="PANDA_000398" /product="hypothetical protein" CDS complement(join(<6129..6284,7541..7676,11522..11697, 12896..13046,22125..22297,23172..23360,28196..28333, 28775..28936,31292..31462,31769..31897,34390..34569, 39474..39644,46173..46328,48216..48389,49082..49210, 49649..49810,51101..51250,53291..53425,57495..57674, 59646..59816,63816..63971,64631..64744,78558..78770, 79430..79575,82108..82288,82453..82694,88299..88386, 91805..91928,95433..95602,96466..96645,96928..97035, 99954..100055,101704..101823,102955..103105, 104029..104210,105333..105536,109240..109400, 110074..110189,112550..112722,114827..114919, 115273..115350,116843..>116935)) /locus_tag="PANDA_000398" /note="GO_function: GO:0003779 - actin binding [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26605.1" /db_xref="InterPro:IPR001589" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR002017" /db_xref="UniProtKB/Swiss-Prot:P46939" /db_xref="UniProtKB/TrEMBL:Q5JCF5" /translation="SGKPPINDMFTDLKDGRKLLDLLEGLTGTSLPKERGSTRVHALN NVNRVLQVLHQNNVDLVNIGGTDIVDGNHKLTLGLLWNIILHWQVKDVMKDVMSDLQQ TNSEKILLSWVRQSTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDRVVKMSP IERLEHAFSKAQTYLGIEKLLDPEDVAVQLPDKKSIIMYLTSLFEVLPQQVTLDAIRE VETLPRKYKKECEEGEISLQSSALEEEHEGPGAETPSTVTAVDMDLDSYQIALEEVLT WLLSAEDTFQEQDDISDDVEEVKDQFATHEDFMMELTAHQSSVGSVLQAGNRLLTQGT LSDEEEFEIQEQMTLLNARWEALRVDSMDRQSRLHDVLMELQKKQLQQLSAWLSLTEE RIQKMETCPLDDDLKSLQKLLEDHKRLQNDLEAEQVKVNSLTHMVVIVDENSGESATA VLEDQLQKLGERWTAVCRWTEERWNRLQEINILWQELLEEQCLLKAWLTEKEEALNKV QTSNFKDQKELSVSIRRLAILKEDMEMKRQALDQLSEIGQDVGQLLDNPKASKKINSD SEELTQRWDSLVQRLEDSSNQVTQAVAKLGMSQIPQKDLLETVRVREQVTTKRSKQEL PPPPPPKKRQIPGDLEAKKKFDAVSAELLNCILKSKTAIQAAEIKGYKKMQETSEMKK KLKGLEKEQTERSPRLDELNQTGQILLEQMGKEGIPTEEIKNVLEKVFSEWKDVSQRL EDLARKIQLQEDLNAYFQQLDDLEKTLKAKEEWVKHTPFSESPQQPLPSLKEACQREL TDLLGLHTRIEMARAGCSALRSRPSAPDFVQQAFESLLNRYQAVRQEIEHRQQQLENE LKSQPGRAYLETLKTLKDILNDSESKAQTSLNVLNDLAKVEKALQEKKALDEILANQK PTLYKLAEETKALEKNVSPDVEKMYKQEFDDVQGKWNKLKVKVSKDLHLLEEITPKLR AFEVDLQVIEKWMDGVKDFLMKEQAVQGDPEGLQSQLDQCSAFVNEIETIESSLKDMK ETEANLRSCPVAGIKTWTQTTLVDYQTQLEKLSKEIVIQKNRLSESQEKAVNLKKDLA EMQEWMTQAEEEYLERDFEYKSPEELESAVEEMKRAKEDVLQKEVRVKILKDNIMLLA AKAPSGGQELTSELNVVLENYQLLCNRIRGKCHTLEEVWSCWIELLHYLDLETSWLST LEERMKSTEALPENADAINEALESLESVLRHPADNRTQIRELGQTLIDGGILDDIISE KLEAFNSRYEDLSHLAESKQISLEKQLQVLRETDHMLQVLQESLGELDKQLTTYLTDR IDAFQVPQEAQKIQAEISAHELTLEELRRNTRSQPPTSPEGRNARGGSQMDVLQRKLR EVSTKFQLFQKPANFEQRMLDCKRVLDGVKAELHVLDVRDVDPDVIQSHLDKCMKLYK TLSEVKLEVETVIKTGRHIVQKQQTDNPKGMDGQLTSLKILYNDLGAQVTEGKQDLER ASQLARKMKKETASLSEWLSVTEVELVQKSTSEGLLGDLDMEISWAKNILKDLEKRKA DLNTITESSAALQSLIEGSEPVLEERLCVLNAGWSRVRTWTEDWCNTLMNHQNQLEIF DGNVAHISTWLYQAEALLDEIEKKPASKREEIVKRLISELDDANLQVENVRDQAVVLM NARGGSSRELVQPKLAELNRNFEKVSQHIKSANLLIGQEPLSYHCMVTTEAFEAEVLF SDLEKLESDIENMLKVVEKHLEFGDEDEKVDEERAQIEEVLQRGEQMLHQPMEDNEKE KIRLQLLLLRTRYNKTKAVPNQQRIGHLAPGSRSPPLPTDYLVEINKVLLFMDDTELS LNAPELSTVVYEDFSLQEDSLKNIKDQLDKLGEQIAVIHEKQPDVILEASGPEAIQIR DTLTQLNAKWDRINRMYNDRKGHFDRAMEEWRQFHCDLNDLTQWITEAEELLAETFAP DGGLDLEKARVHQQELEEGISSHQPSFAALNRTGDGIVQKLSPTDGRFLKDKLSGLNQ RWTAIFAEVRDRRPRLKGESKQVMEYRKRLDDIICWLTKAENALQKTSTSELEENLQE LTDLTQEMDVQAEKLKWLNRTELEMLSDKSLSLHEREKISESLRSVNSTWNKVC" assembly_gap 36425..36528 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 69615..71830 /estimated_length=2216 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 77577..77647 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 150176..150746 /estimated_length=571 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 158434..158441 /estimated_length=8 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 165947..166087 /estimated_length=141 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 234661..234682 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 234926..234993 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 252003..252022 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 284029..285230 /estimated_length=1202 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 288065..288304 /estimated_length=240 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(288414..288495) /locus_tag="PANDA_000399" tRNA complement(288414..288495) /locus_tag="PANDA_000399" /product="tRNA-Leu" assembly_gap 288659..288721 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<307846..308703) /locus_tag="PANDA_000400" mRNA complement(<307846..308703) /locus_tag="PANDA_000400" /product="hypothetical protein" CDS complement(<307846..308703) /locus_tag="PANDA_000400" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005484 - SNAP receptor activity [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26606.1" /db_xref="InterPro:IPR000727" /db_xref="InterPro:IPR006011" /db_xref="InterPro:IPR006012" /db_xref="UniProtKB/Swiss-Prot:O75558" /db_xref="UniProtKB/TrEMBL:Q5TCL6" /translation="MKDRLAELVELTKNYDQQFPDGDDDFDSPHEDIVFETDHILESL YRDIQDLQNENQQLMTDVKRLGKQNARFLTSMRRLSSIKRDTNSIAKDIKARGENIHR KLRAMKALSEEAEARHGPNSAVARISRAQYSALTRTFQGAMHEYNLAEMKQRDNCKIR IQRQLEIMGKDVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIENRHRELLRLE SRIRDVHELFLQMAVLVEEQADTLNVIELNVEKTLDYTGQAKAQVRKAVQYKKENPCR AVCCFCCPCL" assembly_gap 313501..313542 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 323012..323404 /estimated_length=393 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 323526..323746 /estimated_length=221 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 338036..338058 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 343360..343363 /estimated_length=4 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 372325..375542 /estimated_length=3218 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 392123..395939 /estimated_length=3817 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 398877..399121 /locus_tag="PANDA_000401" /pseudo CDS join(398877..398984,398987..399121) /locus_tag="PANDA_000401" /note="similar to Q9BWJ5; contains short intron which is an attempt to correct a frameshift in the coding region" /pseudo /codon_start=1 assembly_gap 419358..419525 /estimated_length=168 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 426321..426661 /estimated_length=341 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 428620..429012 /estimated_length=393 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 439349..439361 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 441168..441279 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 486480..486579 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 494142..494380 /estimated_length=239 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 524378..524403 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 530792..>536614 /locus_tag="PANDA_000402" mRNA join(530792..530943,535378..>536614) /locus_tag="PANDA_000402" /product="hypothetical protein" CDS join(530792..530943,535378..>536614) /locus_tag="PANDA_000402" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26607.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q2I689" /db_xref="UniProtKB/TrEMBL:B2RCM8" /translation="MATYPCQLCGKTFLTLEKFTIHNYSHSRERPYKCLQPDCGKAFI SRYKLMRHMATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNT MLGYKRHLALHAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDH CERCFYTRKDVRRHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQS GDLLSTFHSISPQFQLKSAPLSPFPLGAPAQNGLASSLPAEVHSHPHNPSDQTSQPVQ PLPEPLAPLHPVTSPSSPPPPLQNHKYNTSSTSYSPLASLPLKTDTKGFCNISLLEDL PLQEPQSPHKLTPGFDLAKGSAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPP ATQNAFGNSTLTLGPGESLPHRLGCLGQQQQDPSLAMSTMSLGQLPLPPIPHVFPAGT GSAILPHFHHAFR" gene complement(<547032..>550512) /locus_tag="PANDA_000403" mRNA complement(join(<547032..547142,550360..>550512)) /locus_tag="PANDA_000403" /product="hypothetical protein" CDS complement(join(<547032..547142,550360..>550512)) /locus_tag="PANDA_000403" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26608.1" /db_xref="UniProtKB/Swiss-Prot:Q32KN7" /db_xref="UniProtKB/TrEMBL:B2RUZ7" /translation="SLHLDYIQCPYCMRRFNETAANRHINFCKDQSSRRVFDPAQTAA KLASRAQARAQMSPKKEPTVTSAVGALLQNRALGAPNVAPTRPG" gene complement(<584430..>596630) /locus_tag="PANDA_000404" mRNA complement(join(<584430..584537,584628..584828, 585023..585075,585349..585488,586578..586705, 588131..588386,588750..588888,590273..590360, 594404..594577,596499..>596630)) /locus_tag="PANDA_000404" /product="hypothetical protein" CDS complement(join(<584430..584537,584628..584828, 585023..585075,585349..585488,586578..586705, 588131..588386,588750..588888,590273..590360, 594404..594577,596499..>596630)) /locus_tag="PANDA_000404" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26609.1" /db_xref="InterPro:IPR007307" /db_xref="UniProtKB/Swiss-Prot:Q0VC06" /db_xref="UniProtKB/TrEMBL:B0JZ40" /translation="PHRKKKPFIEKKKAVSFHLVHRSQRDPLAADETAPQRVLLPTQK INDEERRAEQRKYGVFFDDDYDYLQHLKEPSGPSELIPTSTFSAPKKRDEKEETLVIS TTGIKLPSSVFASEFEEDVGLLNKAAPVSGPRLDFDPDIVAALDDDFDFDNPDNLLED DFILQANKPTEEEGTDIQKFEAEDDSEWEDMDDEKERGSDDDNYGSAGSSDEAMSVPG KPPGTIENHLFWEEETKSRFTEYSITSSVMRRNEQLTLHDERFEKFYEQYDDDEIGAL DNAELEGSIQVDSNRLEEVLNDYYKEKAENCVKLNTLEPFEDQDLLMNELDESEEEEV ITVVLEEAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGL TAKQVERMLMINGSDLPKVSTQPRSKNESKEDKKARKQAIKEERKERRVEKKANKLAF KLEKRRQEKELLNLKKNIEGLKL" assembly_gap 601593..602256 /estimated_length=664 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 634497..635212 /estimated_length=716 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<639361..>701893) /locus_tag="PANDA_000405" mRNA complement(join(<639361..639504,642101..642162, 647269..647324,649668..649824,651257..651462, 656818..657352,661267..661506,666799..666957, 672026..672106,701725..>701893)) /locus_tag="PANDA_000405" /product="hypothetical protein" CDS complement(join(<639361..639504,642101..642162, 647269..647324,649668..649824,651257..651462, 656818..657352,661267..661506,666799..666957, 672026..672106,701725..>701893)) /locus_tag="PANDA_000405" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26610.1" /db_xref="InterPro:IPR004018" /db_xref="UniProtKB/Swiss-Prot:O75167" /db_xref="UniProtKB/TrEMBL:A7MCZ5" /translation="VDGLDKASIANSDGPTAGSQTPPFKRKGKLSTIGKIFKPWKWRK KKTSDKFRETSAVLERKISTRQSREELIRRGVLKELPDQDGDVTVNFENSNGHMIPIG EESTREENVVKSEEGNGSVAEKAPLLEEKAEDKKENTENHSETPATPVPCPPALPKPK PKPKPKKTPVPPKGAAAGASPKGDEVPPSKKITKAPGKQAPIPPPKPTSRNTTREAAG SSHSKKTTGSKASASPSTSSTSSRPKASKETLSSKTGTVGITKGKKKSGKQPTSRPST DATPSGTSDLKGEPSETRAESLKPEQTVPGTHEQTSGTSQSAVPPPALAPPPPLPAPP LPQEEQCSVASDTPVVLVSSGADLPVPALDPSQLLWTEEPANRTTVLSGTGLSVSREN AKCFTTKDEPGKVTPQLLTPGLMGESSESFSAPEDEGQRDYQSNDSDSDGPVLYTDDD DDEEDEDEDGSGESALASKIRRRDTLAIKLGNRPSKKELEDKNILQRTSEEERQEIRQ QIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKMELKRRLSRKLSLRPTVAELQ ARRILRFNEYVEVTDSPDYDRRADKPWARLTPADKAR" assembly_gap 679239..679467 /estimated_length=229 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 733177..733232 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 770073..770168 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 845068..845134 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 852127..852293 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 863219..863231 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 863401..863668 /estimated_length=268 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 901088..901214 /estimated_length=127 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <901215..>918695 /locus_tag="PANDA_000406" mRNA join(<901215..901348,905814..906001,909108..909447, 910979..911189,911429..911619,916748..916856, 918558..>918695) /locus_tag="PANDA_000406" /product="hypothetical protein" CDS join(<901215..901348,905814..906001,909108..909447, 910979..911189,911429..911619,916748..916856, 918558..>918695) /locus_tag="PANDA_000406" /note="GO_function: GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26611.1" /db_xref="InterPro:IPR000933" /db_xref="UniProtKB/Swiss-Prot:Q9BTY2" /db_xref="UniProtKB/TrEMBL:Q505Q3" /translation="APRFDPTWESLDARPLPAWFDRAKFGIFIHWGVFSVPSFGSEWF WWYWQEKKIPTYVEFMKNNYAPNFKYEDFGPLFTAKFFNASHWADIFQASGAKYIVLT SKHHEGFTLWGSKYSWNWNAVDEGPKRDLVKELEVAIRNRTDLRFGLYYSLFEWFHPL FLEDKSRSFQQQQFPVSKMLPELYELVNKYQPEILWSDGDGDAPDYYWNSTAFLAWLY NKSPVRDTVVTNDRWGYGTICKHGGYYTCSDRYNPGHLLPHKWENCMTIDKFSWGYRR DAGINDYLTIEELVKQLVETVSCGGNLLMNIGPTHDGTISVIFEERLRQIGTWLKVNG EAIYETHPWRSQSDDVTPNVWYTSKRKQKLVYAIFLEWPTSGRLFLSQPVATLGVTKI KLLGHGQPLNWTSLKPNGLVVELPHLTSHQMPCKWGWALALTNVI" assembly_gap 902604..903963 /estimated_length=1360 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<923717..955368) /locus_tag="PANDA_000407" mRNA complement(join(<923717..923797,926253..926349, 930995..931117,933599..933669,936003..936171, 936715..936769,936877..936943,937232..937356, 938773..938816,943290..943371,947989..948120, 955296..955368)) /locus_tag="PANDA_000407" /product="hypothetical protein" CDS complement(join(<923717..923797,926253..926349, 930995..931117,933599..933669,936003..936171, 936715..936769,936877..936943,937232..937356, 938773..938816,943290..943371,947989..948120, 955296..955368)) /locus_tag="PANDA_000407" /note="GO_component: GO:0005779 - integral to peroxisomal membrane [Evidence IEA]; GO_process: GO:0007031 - peroxisome organization and biogenesis [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26612.1" /db_xref="InterPro:IPR006966" /db_xref="UniProtKB/Swiss-Prot:Q60HE1" /db_xref="UniProtKB/TrEMBL:Q6FGP5" /translation="MLRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE AAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSRPSNKLE IWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTVLAPPDV QQQYLSSIQHLLGDGLTELITVIKQAVQKILGSISLKHSLSLLDLEQKLKEIRNLVEQ HKSSSWINKDGSKSLLCHYMMPDEETPLAVQACGLSPRDVITIKLLNETRDMLESPDF STVLNTCLNRGFSRLLDNMAEFFRPTEQDLQRSNSMSSLSSVSLPLAKIIPIVNGQIH SVCSETPSHFVQDLLMMEQVKDFAANVYEAFSTPQQLEK" assembly_gap 940003..940075 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 940782..940797 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 950984..951055 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <965242..>975497 /locus_tag="PANDA_000408" mRNA join(<965242..965346,968516..968666,969962..970068, 975274..975346,975460..>975497) /locus_tag="PANDA_000408" /product="hypothetical protein" CDS join(<965242..965346,968516..968666,969962..970068, 975274..975346,975460..>975497) /locus_tag="PANDA_000408" /note="GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26613.1" /db_xref="InterPro:IPR002125" /db_xref="InterPro:IPR016192" /db_xref="UniProtKB/Swiss-Prot:Q7Z6V5" /db_xref="UniProtKB/TrEMBL:B0BMY9" /translation="AKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVA IDQALDWCHRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGC GSVLNIASADLPNTGRPFKCIPGYRAEEAVEMLKTFYKQENPNAPKSKVRKKECQK" gene complement(972176..972230) /locus_tag="PANDA_000409" rRNA complement(972176..972230) /locus_tag="PANDA_000409" /product="similar to 28S ribosomal RNA" assembly_gap 1044209..1044448 /estimated_length=240 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1075451..1076128 /estimated_length=678 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1076995..1077029 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1110415..1111754 /estimated_length=1340 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1115410..1115688 /estimated_length=279 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1116423..1116571 /estimated_length=149 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1116686..1116789 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1130711..1130769 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1209382..1292797) /locus_tag="PANDA_000410" mRNA complement(join(<1209382..1209483,1238936..1239091, 1292657..1292797)) /locus_tag="PANDA_000410" /product="hypothetical protein" CDS complement(join(<1209382..1209483,1238936..1239091, 1292657..1292797)) /locus_tag="PANDA_000410" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26614.1" /db_xref="InterPro:IPR006838" /db_xref="UniProtKB/Swiss-Prot:Q9NVV5" /db_xref="UniProtKB/TrEMBL:Q53HV5" /translation="MALIPCQVLRVAILLSYCSILCNYKAIEMPSHQTYGGSWKFLTF IDLVIQAVFFGICVLTDLSSLLTRGSGNQEQERQLKKLISLRDWMLAVLAFPVGIFVV AVFWIIYAYDREMIYPKLLDNFIPGWLNHGM" assembly_gap 1236344..1236396 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1292867..1292900 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1293001..1293065 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1307582..1309351 /estimated_length=1770 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1315951..1316015 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1373270..1373335 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1374544..1374648 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1542537..1542549 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 1544228..>1565919 /locus_tag="PANDA_000411" mRNA join(1544228..1549396,1550575..1550729,1554188..1554363, 1557921..1558022,1558773..1559668,1565098..>1565919) /locus_tag="PANDA_000411" /product="hypothetical protein" CDS join(1544228..1549396,1550575..1550729,1554188..1554363, 1557921..1558022,1558773..1559668,1565098..>1565919) /locus_tag="PANDA_000411" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26615.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:P31629" /db_xref="UniProtKB/TrEMBL:Q38G99" /translation="MDTGDTGLGQKATSRSGETDKASGRWRQEQSAVIKMSTFGSQEG QRQPQVDPEQIGDTASAQLFGSGKLASPSDVAQQVTEKQYPPHRPSPYSCQHSLSFPQ HSLPQGVMHSNKPHQSLEGPPWLFPGPLPSVASEDLFSFPIHGHSGGYPRKKISSLNP AYSQYSQKSIEQSEDAHKKEHKPKKPGKYICPYCSRACAKPSVLKKHIRSHTGERPYP CIPCGFSFKTKSNLYKHRKSHAHAIKAGLVPFTESAVSKLDLEAGFIDVEAEIHSDGE QSTDTDEESSLFVEASEKMSPGPPIPLDIASRGGYHGSLDESLGGPMKVPILIIPKSG IPLPNESSQYIGSDMLPNPSLNTKPDDSHTVKQKLALRLSEKKGQDSEPSLNLLSPHS KGSTDSGYFSRSESAEQQISPPNTNAKSYEEIIFGKYCRLSPRNTLSVTTASQERATM GRKGMMESLPHVNTRLDVKMFEDPVSQLIPSKGEIDPGQTSMLKSTKFNSESRQSQTI PSSIRNEGKLFPANFQGSNPILLEAPVDSSPLIRSNSMPTSSATNLSIPPSLRGSHSF DERMTGSDDVFYPGTVGIPPQRMLRRQAAFELPSVQEGHMEAEHHGRMSKSITGLSLK EKKLISGDRLGYDYDVCRKPYKKWEDNETPKQGYRDISCLSSLKHGGEYFMDPSVPLQ GVPTMFGTTCENRKRRKEKSVGDEEDTPMICSNIVSTPMGIMTSDYDPKLQMQEGIRG GFAMSGHENPSHGHSERFDPCRPQLQSGSPSLGSEESPLATDSDKMSDLGGRKPPGNV ISVIQHTNSLSRPNSFERSESAELAASAPDKASSPSETCDSEISEAPVSPEWAPPADS AESGGKPSPSQQAQQQSYHAQPRLVRQHNIQVPEIRVTEEPDKPEKEKDTQSKEPEKP VEEFQWPQRSETLSQLPAEKLPPKKKRLRLADMEHSSGESSFESTGTGLSRSPSQESN LSHSSSFSMSFEREETIKLAAPPKQDEFGKHSEFLTVPAGSYSLSVPGHHHQKEMRRC SSEQMPCPHPTEVPEIRSKSFDYGNLSHAPVPGALATTLSPSRERKKCFLVRQASFSG SPEIAQGEAGADLSVKQEQMEHLHAGLRAAWHHAPTSVLPPLQAEDPGKQTVGPCGQL SSGPLQLAQQQIMHMDSQESLRNPLIQPTSYITSKHLSEQPHLFPHQETIPFSPIQNA LFQFQYPTVCMVHLPAQQPPWWQAHFPHPLVQHPQKSYGKPSFQAEIHPSYPVEHVAE HTGKKSADYAHAKEQTYPCYSGTSGLHSKNILPKFPSDQSTKSPDTPSEQVLQEDFAS ANAGPLQSLPGTVVPVRIQTHVPSYGSVMYTSISQILGQNSPAIVICKVDENTTQRTL VTNAAMQGIGFNIAQVLGQHAGLEKYPIWKVPQTLPLGLESSIPLCLPSTSDSVATLG GSKRMLSPASSLELFMETKQQKRVKEEKMYGQIVEELSAVELTSSDIKKDMSRPQKPQ LVRQGCASEPKDGLQSGSSSFSSLSPSSSQDHPSASMPLREPFPPTSRAPSLGQKSSG PSESRESSDELDIDETASDMSMSPQSSSVPPGDSQLEEQGKGQKLPVGMLVHMASGPS RKMANSTLLFTDVADFQQILQFPSLRTTTTVSWCFLNYTKPNYVQQATFKSSVYASWC ISSCNPNPSGLNTKTTLALLRSKQKITAEIYTLAAMHRPGTGKLTSSSAWKQFAQMKP DASFLFGSKLERKLVGNILKERGKGDIHGDKDIGSKQTEPIRIKIFEGGYKSNEDYVY VRGRGRGKYICEECGIRCKKPSMLKKHIRTHTDVRPYVCKLCNFAFKTKGNLTKHMKS KAHMKKCLELGVSMTSVDDTETEEAETMEDLHKAAEKHSMSSISTDHQFSDAEESDGE DGDDNDEDDEDDDDFDDQGDLTPKTRSRSTSPQPPRFSSLPVNVGAVPHGVPSDSSLG HSSLISYLVTLPSIQVTQLMTPSDSCEDTQMTEYQRLFQSKSTDSEPDKDRLDIPSCA DEEYMLSSEPSSSPRDFSPSSHHSSPGYDSSPRRDNSPKRYLIPKGDLSPRRHLSPRR DLSPMRHLSPRKEAALRREMSQRDVSPRRHLSPRRPVSPGKDITARRDLSPRRERRYM TTIRAPSPRRALYHNPPLSMGQYLQAEPIVLGPPNLRRGLPQVPYFSLYGDQEGAYEH PGSSLFPEGPNDYVFSHLPLHSQQQVRAPIPMVPVGGIQMVHSMPPALSGLHPPPTLP LPMEGSEEKKGASGESFPKDPYVLLKQHEKRSPHVLQSSGPPSTPSSPRLLMKQSTSE DSLNATEREQEENIQTCTKAIASLRIATEEAALLGADQPVRVQEAHQKPLESAHVSIR HFSGPEPGQPCSSATHPDLHDGEKDNFGSSQTALAHSTFYSKSRVDDKQTGFHSSKEL PSSTEGGNEPSAEKSQLH" assembly_gap 1686931..1690562 /estimated_length=3632 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1702253..1703027 /estimated_length=775 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1718580..1724523 /estimated_length=5944 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1726163..1726171 /estimated_length=9 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1733441..1733550 /estimated_length=110 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1765199..1765213 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1765443..1765443 /estimated_length=1 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1796161..1796194 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1830206..>1897356) /locus_tag="PANDA_000412" mRNA complement(join(<1830206..1830381,1835500..1835652, 1836300..1836401,1847988..1848271,1850306..1850402, 1851583..1851851,1853018..1853145,1857003..1857109, 1858677..1858722,1860346..1860465,1862842..1862982, 1864330..1864501,1865501..1865711,1866356..1866420, 1867523..1867634,1870247..1870389,1873433..1873495, 1874437..1874489,1877561..1877646,1883328..1883411, 1885698..1885766,1894151..1894774,1897011..>1897356)) /locus_tag="PANDA_000412" /product="hypothetical protein" CDS complement(join(<1830206..1830381,1835500..1835652, 1836300..1836401,1847988..1848271,1850306..1850402, 1851583..1851851,1853018..1853145,1857003..1857109, 1858677..1858722,1860346..1860465,1862842..1862982, 1864330..1864501,1865501..1865711,1866356..1866420, 1867523..1867634,1870247..1870389,1873433..1873495, 1874437..1874489,1877561..1877646,1883328..1883411, 1885698..1885766,1894151..1894774,1897011..>1897356)) /locus_tag="PANDA_000412" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO_process: GO:0007218 - neuropeptide signaling pathway [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26616.1" /db_xref="InterPro:IPR000203" /db_xref="InterPro:IPR000832" /db_xref="InterPro:IPR000859" /db_xref="InterPro:IPR001759" /db_xref="UniProtKB/Swiss-Prot:Q86SQ4" /db_xref="UniProtKB/TrEMBL:Q8IXA4" /translation="TVWGCANCRVILSNPSGTFTSPCYPNDYPNSQACMWTLRAPTGY IIQITFNDFDIEEAPNCIYDSLSLDNGESQTKFCGATAKGLSFNSSANEMHVSFSSDF SIQKKGFNASYIRVAVSLRNQKVILPQTLDSYQVSVAKSVSIPELSAFTLCFEATKIG KEDHEWIAFSYSNASFTQLLSFGKAKNGYFISISGSKCFLNSVLPVKDKEDIFTESFE QLCIIWNNSLGSVGVNFKRNYEAVPCDSTISKVIPGNGKLLLGSSHNEMASLKGDIYN FRLWNFTMNSKVLSNLSCHVKGNVVDWQNDFWNIPTLALKAESNLSCGSYLIPLPAAE LANCADLGTLCQATIDSPSTTPPTVTTNMPVTNRIDKQRNDGIVYRISIVIQNILRHP EVKVQSKVAEWLNSTFQNWNYTVYVVNISFHLSTGEDKIKVKRSIVNDQRLVIWALLV YNATNNPNLEGKDIQQKLLKNNESLDEGLRLYAVSVKQLDLCPADEDPKGFHWPLIPP SVYNLPCPGKQGFYASRTCNWDPANASVAYWGLPDLSNCSNEANEVANQILNLTGDGQ TLSSANITSIVEQVKRIVNKEENIDITLGSTLMNIFSNILTSPDSDLLESSSEALKTI DELAFKIDLNSISRVNITTRNLALGVSSLSPGTNEISNFSISLPSNNESYFQMDFESG QMDPLASVILPPNLLENLSQEDSVLVKRAQFTFFNKTGLFQDVETKKGTLVSYVMACS IGNITIQGLKDPVRIKIKHTRNQAVPHPICAFWDLNKNEGSGFWNTSGCVAHRDSDES ETVCLCNHLTHFGVLMDLQGTASQIDARNTKLLTFITYIGCGVSAIFSAATLLTYVAF EKLRRDYPSKILMNLSTALLFLNLLFLLDGWITSFHVDGLCTAIAALLHFFLLATFTW MGLEAIHMYIALVKVFNTYIRRYILKFCIIGWGLPALIVSIVLASRNQNEVYGKESYG KEQGDEFCWIQDPVIFYVTCAGYFGVMFFLNVAMFIVVMVQICGRNGKRSNRTLREEV LRNLRSVVSLTFLLGMTWGFAFFAWGSLNVPFMYLFSIFNSLQGFFIFIFHCAMKENV QKQWRRHLCCGRFRLADNSDWSKTATNIIKKSSDNLGKSLSSSSIGSNSTYLTSKSKS SSTTYFKRNSHTDNASMDKSSSKLTHAVGEQTSIIPVHQVIDKVKGYCNAHSDNFYKN IIMSDTFSHSTKF" assembly_gap 1844931..1844934 /estimated_length=4 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1876625..1876906 /estimated_length=282 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1959545..1959635 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1979766..1979767 /estimated_length=2 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<2032586..2098006) /locus_tag="PANDA_000413" mRNA complement(join(<2032586..2032728,2037765..2037845, 2043022..2043195,2055277..2055385,2072760..2072835, 2073931..2074058,2076750..2076844,2097895..2098006)) /locus_tag="PANDA_000413" /product="hypothetical protein" CDS complement(join(<2032586..2032728,2037765..2037845, 2043022..2043195,2055277..2055385,2072760..2072835, 2073931..2074058,2076750..2076844,2097895..2098006)) /locus_tag="PANDA_000413" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26617.1" /db_xref="InterPro:IPR006745" /db_xref="UniProtKB/Swiss-Prot:Q32L63" /db_xref="UniProtKB/TrEMBL:Q6IP85" /translation="MAALAPLPPLPPQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQ TGMKIDSKTPDCRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYAD NEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGE TPQAGPVGIEEDNDVEENEDAGATSLPTQPPQPSSSTYDPGSMPSSSFTGIQIPPGAH APANTPAEVPHSTGVASNTIQPTPQTIPAIDPTLFSTVSQGDIRLTPEDFARAQKYCK YAGSALQYEDVSTAVQNLQKALKLLTTGRE" assembly_gap 2036283..2036285 /estimated_length=3 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2068431..2068497 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2081066..2082412 /estimated_length=1347 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2105457..2105480 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<2106222..>2107315) /locus_tag="PANDA_000414" mRNA complement(join(<2106222..2106602,2107133..>2107315)) /locus_tag="PANDA_000414" /product="hypothetical protein" CDS complement(join(<2106222..2106602,2107133..>2107315)) /locus_tag="PANDA_000414" /note="GO_component: GO:0005922 - connexon complex [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26618.1" /db_xref="InterPro:IPR000500" /db_xref="InterPro:IPR013092" /db_xref="UniProtKB/Swiss-Prot:Q9CX92" /db_xref="UniProtKB/TrEMBL:Q5RGL4" /translation="VKPPTVIGQFHTLFFGSVRMFFLGVLGFAVYGNEALHFSCDPDK REINLFCYNQFRPITPQVFWALQLVIVLVPGAIFHLYAACKSINQECILQKPIYTVIY ILSVLLRISLEVIAFWLQIHLFGFQVKALYLCDAGSLGEKFTIIKCMVPEHFEKTIFL IAMYTFTVITVVLCVAEVFEIIFRRFCF" assembly_gap 2134248..2134253 /estimated_length=6 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 2136873..>2150650 /locus_tag="PANDA_000415" mRNA join(2136873..2137294,2148071..2148419,2150252..>2150650) /locus_tag="PANDA_000415" /product="hypothetical protein" CDS join(2136873..2137294,2148071..2148419,2150252..>2150650) /locus_tag="PANDA_000415" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO_function: GO:0004946 - bombesin receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26619.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR001556" /db_xref="InterPro:IPR001642" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:P28336" /db_xref="UniProtKB/TrEMBL:B2ZI34" /translation="MPPKSLCNLSQTADENPSGLVPGVYERDFLPASDGTSAKFAIRW VIPSLHLLIITVGLLGNIVLVKIFITNSAMRSVPNIFISNLAAGDLLLLLTCVPVDAS RYFFDEWMFGKVGCKLIPVIQLTSVGVSVFTLTALSADRYRAIVNPMDIQTSGAVLRA SVKAVGIWVVSVLLAVPEAVFSEVTRIDSLEDGNFTACIPYPQTDELHPKIHSVLIFL VYFLIPLAVISVYYYHIAKTLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFV FCWFPNHILYMYRSFNYNEIDPSLGHMIVTLLARILSFCNSCVNPFALYLLSKSFRRH FNSQLCCRRKSYQERSTSYLPSSSAVRMTSLKSNAKNMMTNSVLLNGHSMKQEMAL" assembly_gap 2153031..2153035 /estimated_length=5 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2199177..2199180 /estimated_length=4 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 2205087..2205417 /locus_tag="PANDA_000416" /pseudo CDS join(2205087..2205185,2205187..2205417) /locus_tag="PANDA_000416" /note="similar to Q6P823; contains short intron which is an attempt to correct a frameshift in the coding region" /pseudo /codon_start=1 assembly_gap 2205719..2208548 /estimated_length=2830 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2208779..2209332 /estimated_length=554 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2209468..2209742 /estimated_length=275 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2210105..2210332 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2215832..2216068 /estimated_length=237 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2230039..2233900 /estimated_length=3862 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2307495..2307632 /estimated_length=138 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2308472..2308887 /estimated_length=416 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2353819..2353823 /estimated_length=5 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2373466..2373468 /estimated_length=3 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2415967..2416024 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2463879..2464030 /estimated_length=152 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2482147..2482335 /estimated_length=189 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2522757..2522829 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2560810..2560853 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2565194..2566268 /estimated_length=1075 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2566925..2572734 /estimated_length=5810 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2572918..2573016 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2587080..2587281 /estimated_length=202 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2611679..2611688 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2617885..2617915 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2624044..2624066 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2633658..2634358 /estimated_length=701 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2634689..2634774 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2637094..2637142 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2641743..2641817 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2737203..2737235 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2740341..2740366 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2771224..2771257 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2775659..2775689 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2780765..2780935 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2803668..2803687 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 2812820..2813150 /locus_tag="PANDA_000417" /pseudo CDS join(2812820..2812945,2812950..2813150) /locus_tag="PANDA_000417" /note="similar to P08548; contains short intron which is an attempt to correct a frameshift in the coding region" /pseudo /codon_start=1 assembly_gap 2819515..2819567 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2821104..2821322 /estimated_length=219 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2855359..2855508 /estimated_length=150 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2855778..2864049 /estimated_length=8272 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2873370..2873382 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2873738..2873805 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2883895..2883898 /estimated_length=4 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2891177..2891179 /estimated_length=3 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2926125..2926151 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2944721..2944752 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2979262..2979269 /estimated_length=8 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2989039..2989055 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2991174..2991223 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3000076..3000206 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3022800..3022933 /estimated_length=134 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3039316..3039657 /estimated_length=342 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3084546..3084553 /estimated_length=8 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3084800..3084803 /estimated_length=4 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3095180..3095298 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3112223..3112389 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3116506..3116509 /estimated_length=4 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3124641..3124747 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3124890..3124973 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3189819..3189827 /estimated_length=9 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3190234..3190275 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3221662..3221689 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3237121..3237128 /estimated_length=8 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3302941..3303054 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3325182..3325188 /estimated_length=7 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3386179..3390429 /estimated_length=4251 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3410261..3410340 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3450756..3450920 /estimated_length=165 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3468633..3468744 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3512876..3512885 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3514611..3514655 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3605775..3605831 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3614938..3615104 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3621809..3621820 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3633051..3633099 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3633897..3634330 /estimated_length=434 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3634365..3634425 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3635450..3636843 /estimated_length=1394 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3637943..3638113 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 3647988..3648154 /locus_tag="PANDA_000418" /pseudo CDS join(3647988..3648026,3648029..3648154) /locus_tag="PANDA_000418" /note="similar to human/dog gene MT2_CANFA; contains short intron which is an attempt to correct a frameshift in the coding region" /pseudo /codon_start=1 assembly_gap 3772915..3773286 /estimated_length=372 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3807028..3807114 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3817184..3817200 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3840048..3840117 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 3953538..3967709 /locus_tag="PANDA_000419" mRNA join(3953538..3953589,3953985..3954075,3966275..3966434, 3967335..3967709) /locus_tag="PANDA_000419" /product="hypothetical protein" CDS join(3953538..3953589,3953985..3954075,3966275..3966434, 3967335..3967709) /locus_tag="PANDA_000419" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26620.1" /db_xref="UniProtKB/Swiss-Prot:Q4G0P3" /db_xref="UniProtKB/TrEMBL:Q8IIQ7" /translation="MDPTGILKFGENIREAQGETDAASRFPVVAIPGDACAASLFGRS RRSRLGDLNFKRPVCHQDSASLSSFRVHALSATHHNLQEGPPNIANIDDRQMSWPSEL GHFQIFVNNNNNVKKRNKKKEKEERKVKRKEKKRREERREKRKKERKRREEKRREEKR REEKRREEKRREEKRREEKRREEKRREEKRREEKRREEKRREEKRREEKRKRREEKRK KEGIYIG" assembly_gap 4035815..4035842 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4043960..4044114 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4079328..4079359 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4082354..4082448 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4188455..4188611 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4214878..4215069 /estimated_length=192 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4221946..4221950 /estimated_length=5 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4275715..4275800 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4285267..4285281 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 4286479..4287182 /locus_tag="PANDA_000420" /pseudo CDS join(4286479..4286985,4286988..4287182) /locus_tag="PANDA_000420" /note="similar to O35740; contains short intron which is an attempt to correct a frameshift in the coding region" /pseudo /codon_start=1 assembly_gap 4324794..4325064 /estimated_length=271 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<4331929..>4332156) /locus_tag="PANDA_000421" mRNA complement(<4331929..>4332156) /locus_tag="PANDA_000421" /product="hypothetical protein" CDS complement(<4331929..>4332156) /locus_tag="PANDA_000421" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26621.1" /db_xref="UniProtKB/Swiss-Prot:P02316" /translation="QKKVNLTEGAGQEYLKGQQQGCQLSLLVHIEKKPKKTTGWDKSS DKNKCKIREKAEVAHQETIEDCPAETRETKSE" gene 4346665..>4388125 /locus_tag="PANDA_000422" mRNA join(4346665..4347095,4350750..4350751,4355286..4355377, 4361074..4361244,4364599..4364793,4366601..4366720, 4370448..4370522,4376658..4376750,4385973..4386068, 4387334..>4388125) /locus_tag="PANDA_000422" /product="hypothetical protein" CDS join(4346665..4347095,4350750..4350751,4355286..4355377, 4361074..4361244,4364599..4364793,4366601..4366720, 4370448..4370522,4376658..4376750,4385973..4386068, 4387334..>4388125) /locus_tag="PANDA_000422" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26622.1" /db_xref="UniProtKB/Swiss-Prot:Q8N3L3" /db_xref="UniProtKB/TrEMBL:B2RBM1" /translation="MEMNQSVQLSGEPQSTPPGDSSSLPSQNDLEKQDKDSLTPLQAP EGKTDVQSEQGAHDISEELNRQLEDIINTYGSATEKEGSIQAKEQPENIEPADNEDGD FDEATEEMEREPMASGEPATAKDPVSNKEQKLEKKILKGLGKGKEANLLMQNLKKLQT PEEKLDFLFKKYAELLDEHRTEQKKLKLLQKKQVQIQKEKDQLQSEHSRAILARSKLE SLCRELQRHNKNLKEETLQRAREEEEKRKEITSHFQTTLTDIQGQIEQQSERNMKLCQ ENTELAEKLKSIIDQYELREEHLDKIFKHRELQQKLVDAKLEQAQEMMKEAEEQHKRE KEYLLNQAAEWKLQAKVLKEQETVLQAQLTLYSGRFEEFQNTLTKSNEVFATFKQEMD KTTKKMKKLEKDTATWKARFENCNKALLDMIEEKALRAKEYECFVMKIGRLENLCRAL QEERNELYKKIRDAKKPEKDDQGQHTSDEEPESSVSEGVGVDTEEAKSVQSAVKNLAT AFMVIHHPELTLDQAKEIQPEFSSPQGSGDSALKELEQSPLSPLCHSESSLPPPAPQA EAKGGHEAELPPRPGNPPMGSGAEAQDQGLLATAQTDQLPQKSEAEASSQAPQSPAEA LLPAMEANGPTPPPSADEQISAGVLGCGPSRELPPLEAAAEGLPAGASVGPQRPQVSD TNLEGVD" assembly_gap 4381319..4381382 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4382478..4383194 /estimated_length=717 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4423636..4423948 /estimated_length=313 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<4429499..>4441175) /locus_tag="PANDA_000423" mRNA complement(join(<4429499..4429660,4432760..4432914, 4440134..>4441175)) /locus_tag="PANDA_000423" /product="hypothetical protein" CDS complement(join(<4429499..4429660,4432760..4432914, 4440134..>4441175)) /locus_tag="PANDA_000423" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26623.1" /db_xref="UniProtKB/Swiss-Prot:Q9UBI9" /db_xref="UniProtKB/TrEMBL:Q3V1N5" /translation="EAPCATPLICSFGRPVDLDKDDYQKVVCNNEHCPCSSWMHLQCF YEWESSILVQFNCIGRARSWNEKQCRQNMWTKKGYDLAFRFCSCRCGQGHLKKDTDWY QVKRMQDEKKKKSGSEKNTGRPPGEAGEEAKKCRPPNKPQKGLSHDLPRRHSVDRQNS QEKAVSAAAYGARSPCASPGQSPPTGYSILSPAHFSGPRSSRYLGEFLKNAIHLEPHK KAMAGGHVFRNTHFDYSPAGLSVHRGGHFDAPVQFLRRLDLSELLTHIPRHKLNTFHV RMEDDAQMGQGEDLRKFILAALSASHRNVVNCALCHRALPVFEQFPLVDGTLFLSPSR HDEIEYDVPCHLQGRLMHLYAVCVDCLEGVHKIICIKCKSRWDGSWHQLGTMYTYDIL AASPCCQARLNCKHCGKPVIDVRIGMQYFSEYSNVQQCPHCGNLDYHFVKPFSSFKVL EAY" assembly_gap 4436509..4436550 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4456693..4456816 /estimated_length=124 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4471838..4472313 /estimated_length=476 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4500475..4500477 /estimated_length=3 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4502364..4502438 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4512562..4512573 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4520451..4520514 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4532909..4532911 /estimated_length=3 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<4534835..>4535017) /locus_tag="PANDA_000424" mRNA complement(<4534835..>4535017) /locus_tag="PANDA_000424" /product="hypothetical protein" CDS complement(<4534835..>4535017) /locus_tag="PANDA_000424" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26624.1" /db_xref="UniProtKB/Swiss-Prot:Q9P1F3" /db_xref="UniProtKB/TrEMBL:Q5SZC8" /translation="DADGKLSVKFGVLFRDDKCANLFEALVGTLKAAKRRKIVTYPGE LLLQGVHDDVDIILLQD" assembly_gap 4540329..4540414 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4545665..4545733 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4546100..4546141 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4548271..4548400 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4574088..4574106 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4574234..4574527 /estimated_length=294 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 4574537..>4652781 /locus_tag="PANDA_000425" mRNA join(4574537..4574689,4615172..4615295,4616870..4617066, 4617196..4617349,4617858..4617982,4618497..4618659, 4618943..4619006,4620198..4620352,4631216..4631337, 4634695..4634775,4640447..4640534,4641913..4642014, 4643777..4643849,4645136..4645254,4646265..4646329, 4648238..4648423,4649287..4649382,4651671..4651819, 4652676..>4652781) /locus_tag="PANDA_000425" /product="hypothetical protein" CDS join(4574537..4574689,4615172..4615295,4616870..4617066, 4617196..4617349,4617858..4617982,4618497..4618659, 4618943..4619006,4620198..4620352,4631216..4631337, 4634695..4634775,4640447..4640534,4641913..4642014, 4643777..4643849,4645136..4645254,4646265..4646329, 4648238..4648423,4649287..4649382,4651671..4651819, 4652676..>4652781) /locus_tag="PANDA_000425" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26625.1" /db_xref="InterPro:IPR000261" /db_xref="InterPro:IPR002048" /db_xref="UniProtKB/Swiss-Prot:Q96D71" /db_xref="UniProtKB/TrEMBL:A3KMX4" /translation="MEGLTLSDAEQKYYSDLFSYCDIESTKKVAANGRVLELFRAAQL PNDVVLQIMELCGATRLGYFGRSQFYIALKLVAVAQSGFPLRVESINTVKDLPLPRFV ASKNEQESRHAASYSSDSENQGSYSGVIPPPPGRGQVKKGSVSHDTVQPRTSADQQEP ASPVVSPQQSPPTSPHTWRKHSRHPSGGNSDRPLAGPGPFWSPFGEAQSGSSAGDAVW SGHSPPPPQETWVSFADTPPTSTLLTMHPASVQDQTTVRTVASATTANEIRRQSSSYD DPWKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDK DGALTLDEFCAAFHLVVARKNGYDLPEKLPESLMPKLIDLEDSADVGDQPGEVGYSGS PAEAPPSKSPSMPSLNQTWPELNQSSEQWETFSERSSSSQTLTQFDSNIAPADPDTAI VHPVPIRMTPSKIHMQEMELKRTGSDHTNPTSPLLVKPSDLSEESKINSSVKFASGNT VADGYSSSDSFTSDPEQIGNNVTHQRSHSGTSPDNTAPPPPPPRPQPSHSRSSSLDMN RTFAVTTGQQQAGVVAHPPAVPPRPQPSQAPGPVVHRPVDADGLITHTSTSPQQIPEQ PNFADFSQFEVFAASNVNEEQDDEAEKHPDILPVEKASDSASSLRVAKTDSKIEEKTA ASVPANVSKGTTPLAPPPKPVRRRLKSEDELRPEVDEHTQKTGVLAAVLASQPSIPRS VGKDKKAIQASIRRNKETNTVLARLNSELQQQLK" gene complement(<4657442..>4720243) /locus_tag="PANDA_000426" mRNA complement(join(<4657442..4657566,4659009..4659181, 4668320..4668408,4669782..4669847,4670531..4670687, 4670793..4670866,4672477..4672624,4673636..4673850, 4676207..4676293,4682627..4682730,4684268..4684450, 4686040..4686132,4690988..4691116,4694891..4695059, 4696707..4696845,4697604..4697772,4698636..4698888, 4702236..4702398,4720128..>4720243)) /locus_tag="PANDA_000426" /product="hypothetical protein" CDS complement(join(<4657442..4657566,4659009..4659181, 4668320..4668408,4669782..4669847,4670531..4670687, 4670793..4670866,4672477..4672624,4673636..4673850, 4676207..4676293,4682627..4682730,4684268..4684450, 4686040..4686132,4690988..4691116,4694891..4695059, 4696707..4696845,4697604..4697772,4698636..4698888, 4702236..4702398,4720128..>4720243)) /locus_tag="PANDA_000426" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26626.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR001810" /db_xref="UniProtKB/Swiss-Prot:Q008S8" /db_xref="UniProtKB/TrEMBL:B2RUV6" /translation="QLFQERVALISHWFDLWTNKQRQEFLFTIFLRCTKSQLRFVQDW FSERTQVAKVDFSTVLPRFISLYIFSFLNPKDLCMAAQVSWPWKFLTEQDCLWMPKCI RFGWFLPYTPTDHEYGAWKHHYIACVSSLDWLIPREATAIYGTLNEPKAEDEELQERQ REKGLRKIIWEKIVLRNKELFKVRPPWVSGTRCSRLLKSKCQPRLSQALRDRVGLQEA LEKQLVLASLEALPKRSNVSGSHSYPLLLKKTWHGVHKYDDSSSHASQPHFLLISSRI PAFEMVVDSIKAGIISVVYEHGGLTLESLLYLIEKALDGQKVQSMGIFSDGDSREINL LQGYKIGIKNLLRPEVRDFWEKLGSYVAPEEEGGHVDLFVPLGASEAGMEVLSQLSQL TGTFFTAPTGIATGSYQHILSDWLGRPWERAPCSIYFSESKLQTWSSLTDFLEDTLKS VRKQLSPLFKELQKSVSARIIGQFTFDNMSMANILNNQEIAQTLADGLMELSKDNSEG NVLEDSPQDTKSSLSKNDPNLEMLVKLERKLQVDSAEKRSKVVRELLQSERKYVRMLE IVRDVYVTPLKAALSSNRAILSAANLHIIFSDILQVLSLNRQFLDNLRDRLQEWGPAH CVGEIFLKFGSQLNTYTNFFNNYPVVLRTMEKCREMIPAFRAFLKRHDKTVVTKMLSL PELLLYPSRRFEEYINLLYALRLHTPAEHVDRGHLTTAIDQLKKYKSYIDQMKQNISM KDQLSEIQRIVCGCPTLSEENRYLIRVQDVAQLHCCDEAISFSLRLYEHTRDLSLFLF NDALLVSSRGTSHTPFERTSKATYQFIASVALHRLLVEDIPDSKYIKNAFILHGPKRE WICATEVEDDKFLWLSVLQSAIKRSMEK" assembly_gap 4664931..4665213 /estimated_length=283 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(4738522..4742444) /locus_tag="PANDA_000427" /pseudo CDS complement(join(4738522..4738676,4741383..4741576, 4742266..4742444)) /locus_tag="PANDA_000427" /note="similar to Q8IWP9; contains internal stop codon which may be caused by sequencing artifacts" /pseudo /codon_start=1 assembly_gap 4774093..4774511 /estimated_length=419 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4810073..4810093 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4813541..4813639 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4813865..4814425 /estimated_length=561 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4817319..4817525 /estimated_length=207 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4823349..4823542 /estimated_length=194 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4840382..4840674 /estimated_length=293 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4871129..4871265 /estimated_length=137 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <4912368..>5037728 /locus_tag="PANDA_000428" mRNA join(<4912368..4912566,4975424..4975576,4999585..4999712, 5018327..5018519,5028688..5031927,5032367..5032568, 5036996..>5037728) /locus_tag="PANDA_000428" /product="hypothetical protein" CDS join(<4912368..4912566,4975424..4975576,4999585..4999712, 5018327..5018519,5028688..5031927,5032367..5032568, 5036996..>5037728) /locus_tag="PANDA_000428" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26627.1" /db_xref="UniProtKB/Swiss-Prot:Q5SYE7" /db_xref="UniProtKB/TrEMBL:Q5SPA0" /translation="KKMKKEGSFRLKSNSGSLSRAVSWINFSSLSRQTKRLFRSDGEL SVCGQQVEADDENWNYRTQPRKAVSNLDEESRWTVHYTAPWHQQENVFLPTTRPPCVE DLHRQAKLNLKSVLRECDKLRRDGYRSSQYYSQGPTFAANASPLCDDYQDEDEETDQK CSVSSSEEERLISIRRPKTPTSGDFSDLNTQTNWTKSLPLPTPEEKMRQQAQTVQADV VPINITASGAGQDDVAGHSVYAPDHYSTLGRLDSYRAVGQRSETRDSSCQTEEVKVVP PSMRRIRAQKGQGIAAQMSHFSGSSGNMSVLSDSAGIVFHSRLNSDAGFHSLPRSGAR ASVQSLEPRLGALGPAEDLDGTYPYQSGPPQVDENLGRLGGASRTAMLLRPKSQELRH FENIISPACVVSPHATYSTSIIPNATLSSSSEMMIIHTAQSSGQLDSKITSSSSYTKV KSRDQLLSRHASKEDHQSPCGTWMEGHPGVLSQAFDPHSPGATTLLSLCDSEVSLNTS ANRENGSQAMSYNYKNNLSSPVHAQDVDGKSESSHSGGTGPGSSEPWEYGASGNGQAS PLKAHLATPGHSTPGSNVSSGSLDQTSTKDDARSLYSEEHDGYYMAMHPGLGDGSGSQ YSSDGFGNPRHSVVNVFDGRAQKNQGDRSHYHDKSLSRNISLKKAKKPPLPPSRTDSL RRIPKKGIQSNGQALNESLIASLQHSLQLNLPGKGGSSPSQSPCSDFEEPWLPRSRSQ STVSAGSSMTSATAPNVYSLCGATPSQSDTSSVRSEYTDPWGYYIDYTGMQEDPGNPG GGCSAGSGAPAGNGPVHHVQEGARTMLPQVPGGSVKPKITSPEKSHRVTSPSSGYSSQ SNTPTALTPVPVFLKSVSPANGKGKTKPKVPERKSSLISSVSISSSSTSLSSNTSTEG SGTMKKLDSVLASPLAAAPSPSLPSPCPVDKSPFLPPPPPLVDSPDGSLPQSPLFPPP PPEVLTPFSSPTSSCFPPPSRALSPLTLCAPASLPPPPTSVPSSAPPPAPPLDPKWMK DARPSFKKSGQSECSREAFRQPSNEEGSRPPMPLITTEALQMVQLRPVKKNSGTEQAL LYEQVSQEKLTPVVPQYHLKPSAFLKSRNSINEMESESQPASVTSSPPTPAKSLSQGH QDGAAERGLTSRSPGSTGEAEAGPGPRAAPLQEPPGPSPSRKPPPISKKPKLFLVVPP PQRDFTAEPAENVSGASLSPTRGEATESCRSRAGAEEPGFGSPVLEGEAAGSASPGGV KAHVPMVQPDVSPAPSQEEPGAENSTDGGGNVESCLSLQDGGRSLAEDWNSSHLCVLC VSVCSSVAGVPEPDTAGSSSEAGDFLREEGSDEVMTPSRPRTTEDLFAAIHRSKRKVL GRKDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGSIQRSVRKSSTSSDNFKALLLKK GSRSDTSARMSAAEMLKNTDPRFQRSRSEPSPDTPESPSSCSPSKNRRAQEEWAKNEG LMPRSLSFSGPRYGRSRTPPSAASSRYSVRNRIQSSPMTVISEGEGEAVEPVDSRAHW ALGAARGCSLDGLVGSETDKGSLLCGGEPAASLSVQGAGPADGTVGAQGTDPAQQCGG PVQGES" gene complement(<5054178..>5067615) /locus_tag="PANDA_000429" mRNA complement(join(<5054178..5054373,5066556..5066736, 5067477..>5067615)) /locus_tag="PANDA_000429" /product="hypothetical protein" CDS complement(join(<5054178..5054373,5066556..5066736, 5067477..>5067615)) /locus_tag="PANDA_000429" /codon_start=1 /product="hypothetical protein" /protein_id="EFB26628.1" /db_xref="InterPro:IPR006917" /db_xref="UniProtKB/Swiss-Prot:Q9Y5Z4" /db_xref="UniProtKB/TrEMBL:Q05DB4" /translation="QPGSYEIRHYGPAKWVSTSVESMDWDSAIQTGFTKLNGYIQGKN EKEMKIKMTAPVTSLVEPGAGPFSESIITISLYIPSEQQSDPPRPSESDVFIEDRAEM TVFVRAFDGFSSAQKNQEQLLTLASALREEGKVFNEKVYYTAGYNSPFKLLDRNNEVW LIQKNEPSKENK" assembly_gap 5057136..5057396 /estimated_length=261 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5063912..5064733 /estimated_length=822 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5068274..5068330 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5068415..5068428 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5068560..5068564 /estimated_length=5 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5079621..5082088 /estimated_length=2468 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5096709..5099893 /estimated_length=3185 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5118527..5118630 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5121534..5121835 /estimated_length=302 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5124072..5124186 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5124323..5129911 /estimated_length=5589 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(5142622..5269327) /locus_tag="PANDA_000430" /pseudo CDS complement(join(5142622..5142810,5142815..5142852, 5147305..5148503,5151829..5151950,5154019..5154150, 5154385..5154487,5155263..5155377,5156672..5156848, 5159158..5159286,5170437..5170581,5172289..5172392, 5176524..5176646,5178152..5178296,5184934..5185113, 5186713..5186858,5188914..5189047,5191205..5191525, 5192806..5192956,5194439..5194549,5194695..5194910, 5195258..5195365,5198668..5198833,5199900..5200066, 5211456..5212366,5213141..5213253,5223356..5223689, 5224641..5224745,5232770..5232848,5235093..5235135, 5238521..5238643,5250623..5250691,5269184..5269327)) /locus_tag="PANDA_000430" /note="similar to Q5TH69; contains short intron which is an attempt to correct a frameshift in the coding region" /pseudo /codon_start=1 assembly_gap 5161957..5168674 /estimated_length=6718 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5216453..5216826 /estimated_length=374 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5240814..5240823 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5253872..5253918 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5290943..5291428 /estimated_length=486 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5293128..5293198 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5313600..5313934 /estimated_length=335 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(ACTA01161555.1:1..2650,gap(68),ACTA01169553.1:1..33706, gap(104),ACTA01177551.1:1..33086,gap(2216),ACTA01185549.1:1..5746, gap(71),ACTA01193547.1:1..72528,gap(571),ACTA01001560.1:1..7687, gap(8),ACTA01009560.1:1..7505,gap(141),ACTA01017560.1:1..68573, gap(22),ACTA01025560.1:1..243,gap(68),ACTA01033560.1:1..17009, gap(20),ACTA01041559.1:1..32006,gap(1202),ACTA01049559.1:1..2834, gap(240),ACTA01057559.1:1..354,gap(63),ACTA01065559.1:1..24779, gap(42),ACTA01073559.1:1..9469,gap(393),ACTA01081559.1:1..121, gap(221),ACTA01089559.1:1..14289,gap(23),ACTA01097559.1:1..5301, gap(4),ACTA01105559.1:1..28961,gap(3218),ACTA01113559.1:1..16580, gap(3817),ACTA01121559.1:1..23418,gap(168),ACTA01129559.1:1..6795, gap(341),ACTA01137559.1:1..1958,gap(393),ACTA01145558.1:1..10336, gap(13),ACTA01153557.1:1..1806,gap(112),ACTA01161556.1:1..45200, gap(100),ACTA01169554.1:1..7562,gap(239),ACTA01177552.1:1..29997, gap(26),ACTA01185550.1:1..77189,gap(664),ACTA01193548.1:1..32240, gap(716),ACTA01001561.1:1..44026,gap(229),ACTA01009561.1:1..53709, gap(56),ACTA01017561.1:1..36840,gap(96),ACTA01025561.1:1..74899, gap(67),ACTA01033561.1:1..6992,gap(167),ACTA01041560.1:1..10925, gap(13),ACTA01049560.1:1..169,gap(268),ACTA01057560.1:1..37419, gap(127),ACTA01065560.1:1..1389,gap(1360),ACTA01073560.1:1..36039, gap(73),ACTA01081560.1:1..706,gap(16),ACTA01089560.1:1..10186, gap(72),ACTA01097560.1:1..93153,gap(240),ACTA01105560.1:1..31002, gap(678),ACTA01113560.1:1..866,gap(35),ACTA01121560.1:1..33385, gap(1340),ACTA01129560.1:1..3655,gap(279),ACTA01137560.1:1..734, gap(149),ACTA01145559.1:1..114,gap(104),ACTA01153558.1:1..13921, gap(59),ACTA01161557.1:1..105574,gap(53),ACTA01169555.1:1..56470, gap(34),ACTA01177553.1:1..100,gap(65),ACTA01185551.1:1..14516, gap(1770),ACTA01193549.1:1..6599,gap(65),ACTA01001562.1:1..57254, gap(66),ACTA01009562.1:1..1208,gap(105),ACTA01017562.1:1..167888, gap(13),ACTA01025562.1:1..144381,gap(3632),ACTA01033562.1:1..11690, gap(775),ACTA01041561.1:1..15552,gap(5944),ACTA01049561.1:1..1639, gap(9),ACTA01057561.1:1..7269,gap(110),ACTA01065561.1:1..31648, gap(15),ACTA01073561.1:1..229,gap(1),ACTA01081561.1:1..30717, gap(34),ACTA01089561.1:1..48736,gap(4),ACTA01097561.1:1..31690, gap(282),ACTA01105561.1:1..82638,gap(91),ACTA01113561.1:1..20130, gap(2),ACTA01121561.1:1..56515,gap(3),ACTA01129561.1:1..32145, gap(67),ACTA01137561.1:1..12568,gap(1347),ACTA01145560.1:1..23044, gap(24),ACTA01153559.1:1..28767,gap(6),ACTA01161558.1:1..18777, gap(5),ACTA01169556.1:1..46141,gap(4),ACTA01177554.1:1..6538, gap(2830),ACTA01185552.1:1..230,gap(554),ACTA01193550.1:1..135, gap(275),ACTA01001563.1:1..362,gap(228),ACTA01009563.1:1..5499, gap(237),ACTA01017563.1:1..13970,gap(3862),ACTA01025563.1:1..73594, gap(138),ACTA01033563.1:1..839,gap(416),ACTA01041562.1:1..44931, gap(5),ACTA01049562.1:1..19642,gap(3),ACTA01057562.1:1..42498, gap(58),ACTA01065562.1:1..47854,gap(152),ACTA01073562.1:1..18116, gap(189),ACTA01081562.1:1..40421,gap(73),ACTA01089562.1:1..37980, gap(44),ACTA01097562.1:1..4340,gap(1075),ACTA01105562.1:1..656, gap(5810),ACTA01113562.1:1..183,gap(99),ACTA01121562.1:1..14063, gap(202),ACTA01129562.1:1..24397,gap(10),ACTA01137562.1:1..6196, gap(31),ACTA01145561.1:1..6128,gap(23),ACTA01153560.1:1..9591, gap(701),ACTA01161559.1:1..330,gap(86),ACTA01169557.1:1..2319, gap(49),ACTA01177555.1:1..4600,gap(75),ACTA01185553.1:1..95385, gap(33),ACTA01193551.1:1..3105,gap(26),ACTA01001564.1:1..30857, gap(34),ACTA01009564.1:1..4401,gap(31),ACTA01017564.1:1..5075, gap(171),ACTA01025564.1:1..22732,gap(20),ACTA01033564.1:1..15827, gap(53),ACTA01041563.1:1..1536,gap(219),ACTA01049563.1:1..34036, gap(150),ACTA01057563.1:1..269,gap(8272),ACTA01065563.1:1..9320, gap(13),ACTA01073563.1:1..355,gap(68),ACTA01081563.1:1..10089, gap(4),ACTA01089563.1:1..7278,gap(3),ACTA01097563.1:1..34945, gap(27),ACTA01105563.1:1..18569,gap(32),ACTA01113563.1:1..34509, gap(8),ACTA01121563.1:1..9769,gap(17),ACTA01129563.1:1..2118, gap(50),ACTA01137563.1:1..8852,gap(131),ACTA01145562.1:1..22593, gap(134),ACTA01153561.1:1..16382,gap(342),ACTA01161560.1:1..44888, gap(8),ACTA01169558.1:1..246,gap(4),ACTA01177556.1:1..10376, gap(119),ACTA01185554.1:1..16924,gap(167),ACTA01193552.1:1..4116, gap(4),ACTA01001565.1:1..8131,gap(107),ACTA01009565.1:1..142, gap(84),ACTA01017565.1:1..64845,gap(9),ACTA01025565.1:1..406, gap(42),ACTA01033565.1:1..31386,gap(28),ACTA01041564.1:1..15431, gap(8),ACTA01049564.1:1..65812,gap(114),ACTA01057564.1:1..22127, gap(7),ACTA01065564.1:1..60990,gap(4251),ACTA01073564.1:1..19831, gap(80),ACTA01081564.1:1..40415,gap(165),ACTA01089564.1:1..17712, gap(112),ACTA01097564.1:1..44131,gap(10),ACTA01105564.1:1..1725, gap(45),ACTA01113564.1:1..91119,gap(57),ACTA01121564.1:1..9106, gap(167),ACTA01129564.1:1..6704,gap(12),ACTA01137564.1:1..11230, gap(49),ACTA01145563.1:1..797,gap(434),ACTA01153562.1:1..34, gap(61),ACTA01161561.1:1..1024,gap(1394),ACTA01169559.1:1..1099, gap(171),ACTA01177557.1:1..134801,gap(372),ACTA01185555.1:1..33741, gap(87),ACTA01193553.1:1..10069,gap(17),ACTA01001566.1:1..22847, gap(70),ACTA01009566.1:1..195697,gap(28),ACTA01017566.1:1..8117, gap(155),ACTA01025566.1:1..35213,gap(32),ACTA01033566.1:1..2994, gap(95),ACTA01041565.1:1..106006,gap(157),ACTA01049565.1:1..26266, gap(192),ACTA01057565.1:1..6876,gap(5),ACTA01065565.1:1..53764, gap(86),ACTA01073565.1:1..9466,gap(15),ACTA01081565.1:1..39512, gap(271),ACTA01089565.1:1..56254,gap(64),ACTA01097565.1:1..1095, gap(717),ACTA01105565.1:1..40441,gap(313),ACTA01113565.1:1..12560, gap(42),ACTA01121565.1:1..20142,gap(124),ACTA01129565.1:1..15021, gap(476),ACTA01137565.1:1..28161,gap(3),ACTA01145564.1:1..1886, gap(75),ACTA01153563.1:1..10123,gap(12),ACTA01161562.1:1..7877, gap(64),ACTA01169560.1:1..12394,gap(3),ACTA01177558.1:1..7417, gap(86),ACTA01185556.1:1..5250,gap(69),ACTA01193554.1:1..366, gap(42),ACTA01001567.1:1..2129,gap(130),ACTA01009567.1:1..25687, gap(19),ACTA01017567.1:1..127,gap(294),ACTA01025567.1:1..90403, gap(283),ACTA01033567.1:1..108879,gap(419),ACTA01041566.1:1..35561, gap(21),ACTA01049566.1:1..3447,gap(99),ACTA01057566.1:1..225, gap(561),ACTA01065566.1:1..2893,gap(207),ACTA01073566.1:1..5823, gap(194),ACTA01081566.1:1..16839,gap(293),ACTA01089566.1:1..30454, gap(137),ACTA01097566.1:1..185870,gap(261),ACTA01105566.1:1..6515, gap(822),ACTA01113566.1:1..3540,gap(57),ACTA01121566.1:1..84, gap(14),ACTA01129566.1:1..131,gap(5),ACTA01137566.1:1..11056, gap(2468),ACTA01145565.1:1..14620,gap(3185), ACTA01153564.1:1..18633,gap(104),ACTA01161563.1:1..2903,gap(302), ACTA01169561.1:1..2236,gap(115),ACTA01177559.1:1..136,gap(5589), ACTA01185557.1:1..32045,gap(6718),ACTA01193555.1:1..47778,gap(374), ACTA01001568.1:1..23987,gap(10),ACTA01009568.1:1..13048,gap(47), ACTA01017568.1:1..37024,gap(486),ACTA01025568.1:1..1699,gap(71), ACTA01033568.1:1..20401,gap(335),ACTA01041567.1:1..17686) //