LOCUS       GG662205                8327 bp    DNA     linear   CON 11-MAR-2015
DEFINITION  Tetrahymena thermophila SB210 genomic scaffold scf_8253803
            macronuclear, whole genome shotgun sequence.
ACCESSION   GG662205 AAGF03000000
VERSION     GG662205.1
DBLINK      BioProject: PRJNA12564
            BioSample: SAMN02953617
KEYWORDS    WGS.
SOURCE      Tetrahymena thermophila SB210
  ORGANISM  Tetrahymena thermophila SB210
            Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata;
            Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae;
            Tetrahymena.
REFERENCE   1  (bases 1 to 8327)
  AUTHORS   Bidwell,S., Michalis,H.M., Zafar,N., Joardar,V., Miao,W., Russ,C.,
            Eisen,J., Wu,M., Wu,D., Nierman,W., Orias,E., Delcher,A.,
            Salzberg,S. and Coyne,R.
  TITLE     Annotation update of Tetrahymena thermophila SB210
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8327)
  AUTHORS   Eisen,J.A., Wu,M., Wu,D., Nierman,W.C., Orias,E., Delcher,A.L. and
            Salzberg,S.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2008) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
COMMENT     Annotation was updated on the scaffolds in February 2014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Celera Assembler v. before 2009
            Assembly Name         :: JCVI-TTA1-2.2
            Genome Coverage       :: 9.08x
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..8327
                     /organism="Tetrahymena thermophila SB210"
                     /macronuclear
                     /mol_type="genomic DNA"
                     /submitter_seqid="scf_8253803"
                     /strain="SB210"
                     /db_xref="taxon:312017"
     gene            complement(<956..>1713)
                     /locus_tag="TTHERM_01623880"
     mRNA            complement(join(<956..1046,1306..1395,1643..>1713))
                     /locus_tag="TTHERM_01623880"
                     /product="hypothetical protein"
                     /note="transcript TTHERM_01623880A"
     CDS             complement(join(956..1046,1306..1395,1643..1713))
                     /locus_tag="TTHERM_01623880"
                     /note="encoded by transcript TTHERM_01623880A"
                     /codon_start=1
                     /transl_table=6
                     /product="hypothetical protein"
                     /protein_id="EAS07929.1"
                     /translation="MGASGLGSALANCINLSKLRLYLRSNYIGDMGAQGLGSGLANCI
                     NLSNLTLNLRYNEIGAMGASGLGSGLANCINLSNLTLNL"
     gene            <2119..>2349
                     /locus_tag="TTHERM_001623890"
     mRNA            <2119..>2349
                     /locus_tag="TTHERM_001623890"
                     /product="hypothetical protein"
                     /note="transcript TTHERM_001623890A"
     CDS             2119..2349
                     /locus_tag="TTHERM_001623890"
                     /note="encoded by transcript TTHERM_001623890A"
                     /codon_start=1
                     /transl_table=6
                     /product="hypothetical protein"
                     /protein_id="EWS70905.1"
                     /translation="MFQINFYNQKFYNLKQINSFYQVQVLIAQNEEKISNNKKXXXXX
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKK"
     gap             2236..2335
                     /estimated_length=100
     gene            complement(<3409..>4623)
                     /locus_tag="TTHERM_01624890"
     mRNA            complement(<3409..>4623)
                     /locus_tag="TTHERM_01624890"
                     /product="tRNA (guanine(37)-N(1))-methyltransferase"
                     /note="transcript TTHERM_01624890A"
     CDS             complement(3409..4623)
                     /locus_tag="TTHERM_01624890"
                     /note="encoded by transcript TTHERM_01624890A"
                     /codon_start=1
                     /transl_table=6
                     /product="tRNA (guanine(37)-N(1))-methyltransferase"
                     /protein_id="EAS07931.2"
                     /translation="MNQETQQKMEVSDKVEKENSIGDEHEDENQDLVEDLLFGDIEFE
                     SKEFKIERLSHSQKKLQQYHQHLQKHTDKEFLKDKWNQRKKRVNKRLDGLSNDEKFQE
                     RCKRKEEIEQERLNMIKGYESGIPLIIDNSFEQYMTFREIRSLAIQISQTVFAQRKNK
                     NPFQVNVCNASQQLKDCMNTQIFKKLPFNVYEQDILEIERFKGKEANMIYLSPDSENE
                     LETVDPSGNTIYIVGGLIDRTVKKWASYDRANSMNIKSAKLPINQYLSDLTRRALNID
                     TVTVMMGLAIHLNFDWKTTTLTVLGNRKINEDLKEEQKQVVLEGVEKLGSSKLDKSSH
                     LIDIQKSIESRLKKQNKQILNDDQKNQQNSNNISQNESSSFNQLDQIEKLQITENLNQ
                     ENSEKTDKQNHE"
     gene            complement(<5650..>7518)
                     /locus_tag="TTHERM_01624900"
     mRNA            complement(<5650..>7518)
                     /locus_tag="TTHERM_01624900"
                     /product="Sec1 family protein"
                     /note="transcript TTHERM_01624900A"
     CDS             complement(5650..7518)
                     /locus_tag="TTHERM_01624900"
                     /note="encoded by transcript TTHERM_01624900A"
                     /codon_start=1
                     /transl_table=6
                     /product="Sec1 family protein"
                     /protein_id="EAS07932.1"
                     /translation="MDIYGQQGSMKQGKQANLIKLQREVLENVLKVSKREEESDGCVW
                     KVLIFDTHCQNILSTLLKVGHLREMNITLHLNINQKGEKRDRLHGVKAYYLVQPTQEN
                     IKAIMEDFNKDLYDQVYINFSSPADEELLQSLAVHVGNLNAVYKIKRVVQYTIDFVTL
                     SRDFFSLNIKESYKSLRAAGTRTAAQVISQAAMGLFSLFRTMKKTPYIIYSDDKNNVL
                     LAQELYSLFENLYKNSKEYEDESTDFLQPQFTQPILILVDRDVDLGSMLLHPWHYGAL
                     IHDVYHIENNKVKLNKPDSKEVQNFDLDSQNEDSYWLDKMNIPFPEVAKDIVERLQKW
                     DIEYKQITSIKEDTSKMVAAMSNINEMKDQRRLIEMHMSISAGLKSELSTRHLDKYFE
                     AGSTIIREKQLKGQEKSELIEMFQQCSIGAGKPNFDLDKLRVLIIYLLFVQDIDINDF
                     KQLEEAAGITNKKYIQILEQFKQKRIPETTTSTAASSDTNLNSEEIADKLTSIFGKFA
                     SRVKSQGKGLINNVKNNLIGIEQDFEIATQVKSIIESKCMNSEKLGYKFIDILNNQNT
                     LTQPKIFSDVVVFSLGGGNYNEYQNIQEIGKKLNKNIMYGGSEILNAETFIQQLTS"
CONTIG      join(AAGF03000190.2:1..2235,gap(100),AAGF03000760.2:1..5992)
//