LOCUS GDBI01000132 4978 bp RNA linear TSA 30-JUN-2016 DEFINITION TSA: Sistrurus catenatus tergeminus Scate_VEGF-2 transcribed RNA sequence. ACCESSION GDBI01000132 VERSION GDBI01000132.1 DBLINK BioProject: PRJNA88989 BioSample: SAMN03658792 Sequence Read Archive: SRR2029826 KEYWORDS TSA; Transcriptome Shotgun Assembly; Targeted. SOURCE Sistrurus catenatus tergeminus (western massasauga) ORGANISM Sistrurus catenatus tergeminus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Sistrurus. REFERENCE 1 (bases 1 to 4978) AUTHORS Rokyta,D.R., Margres,M.J. and Calvin,K. TITLE Post-transcriptional Mechanisms Contribute Little to Phenotypic Variation in Snake Venoms JOURNAL G3 (Bethesda) 5 (11), 2375-2382 (2015) PUBMED 26358130 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4978) AUTHORS Margres,M.J. and Rokyta,D.R. TITLE Direct Submission JOURNAL Submitted (21-MAY-2015) Department of Biological Science, Florida State University, 319 Stadium Drive, Tallahassee, FL 32306, USA COMMENT ##Assembly-Data-START## Assembly Method :: NGen Version 11 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4978 /organism="Sistrurus catenatus tergeminus" /mol_type="transcribed RNA" /isolate="KW1090" /sub_species="tergeminus" /db_xref="taxon:8757" /sex="female" /tissue_type="Venom gland" /dev_stage="Adult" CDS 920..1498 /codon_start=1 /product="Vascular endothelial growth factor 2" /protein_id="JAS05235.1" /db_xref="GI:1041578881" /translation="MNFLLTWIHWGLAALLYFHNAKVLQAAPAQGDGDRQQSEVIPFM TVYERSVCRPIETMVDIFQEYPDEVEYILKPPCVALMRCGGCCNDEALECVPTELYNV TMEIMKLKPYQSQHIHPMSFQQHSKCECRPKKEIRIIQENHCEPCSERRKHLYKQDPL TCKCSCKFTDSRCKSKQLELNERTCRCEKPRR" BASE COUNT 1417 a 1028 c 1139 g 1394 t ORIGIN 1 ctagccggag caggctgcac ttccactact ccgcctacca ttcgggagag caagagcgag 61 agggagattg agcgagaccg gagacgttca ttggcataaa agtgaagacg ttctctcggt 121 ttaaacgaat aataataata ataaggaagc gagatcgagc agggaaacga gatccagagt 181 tcttccttct ctcccttacg ctctgagaat ctgcgattca ttcttctatt tgcccattat 241 ttattcccct tcccctgatc tgccgagaaa tttcttcgct taaagaactt ggattttgtc 301 ctttttggtg gaaaaaaaaa aggagggagg gaagttttta aagccaagaa gaaggggccc 361 gaatcgaacc gggctgaatg aagagttctt cctaaaacag ctgttaaaca aacccaacca 421 tccaacttca gctgggaagc agcgagtcat agcagctgta agatccgaga ccttggaaag 481 ggggaaaaaa aaaatgcact gaaagttttg gcaaactttt cttcttcgtc tcggtttttt 541 ttcttttctt tttgccccgg tgcttgtgtg gtggtgagag cgagcgtgct cgcgtggggt 601 gtcttgccac cgagggctgg agtgtgcctg gagaggggag aggaaaatcg gttactattc 661 gttgtgctgc tagggaattg ttctggagaa gctccggatc ggaaccgagc tgagccgaag 721 accccgagcg cgcggcaaac cgaggacaaa ctacgtctct ggggcctcgg gagagccgag 781 cttatggacg ggtgaaacca gagtctaata ttctcccccc tcccccttca acccctcagc 841 ttgatcacag cgaccgccga gcaaagaaga gaaggcttag agaacccgac cgagccaatc 901 caccctcgct cctggaatca tgaactttct gctcacttgg atccattggg ggttggcggc 961 gctgctttat ttccacaacg ccaaggtgtt gcaggctgct cctgcccagg gggatggaga 1021 caggcaacaa agtgaagtta tcccatttat gaccgtctat gagcgcagtg tctgcaggcc 1081 aattgagacc atggtagata ttttccagga gtatcctgat gaggtggaat acatcttgaa 1141 accaccctgt gtggccctga tgagatgtgg aggatgctgt aatgacgaag cgctagaatg 1201 tgtgcctaca gagctgtaca atgtcaccat ggagatcatg aaactcaaac cctatcagag 1261 ccagcatata catccaatga gcttccagca gcacagtaaa tgtgaatgca gaccaaagaa 1321 agaaatcaga attatacaag aaaatcactg tgaaccttgc tcagaaagga gaaagcactt 1381 gtacaaacaa gatcccctga cctgtaaatg ttcctgcaaa ttcacagact cacgttgcaa 1441 gtcgaagcag cttgagttaa acgagcgcac ttgcagatgt gaaaaaccaa ggcggtgagc 1501 agcaggggaa gaaagggagt gtgggagcag ccttggttct ggagcctgac atctcacctg 1561 gtcagaaatt gaaaacaaac actaatccaa atgaacacta aaaatgaagg atcagcagcg 1621 cacagcactt ttgagtatgg acgatagact ctggaaggaa cattccctga ggacccgcgc 1681 aggattcacc ttttggtttt gaactggttt tacagaaaaa ctttccttct catgctgcta 1741 agatatagag ccagggagag tggagtgata tatgcttggg actccccata cacatgaagt 1801 atatgtatat gtatataaat atgtatgtgt atatgtatat atactgaatt tctaaaacat 1861 tgctaacatt attggtgtct tcactggata tactcaactg ctgtggacac aagtgggctg 1921 tttgggacat aagaaagaaa ctacgactgg actccagtca acactgctca atatattctt 1981 catactctgt ctgaccctct aaagcctgct ggtctcattt cctctcccca ctctcctgcc 2041 ccagtcccgt gcggtgaaac atttatgcga aaaaagagat ggcaggggat tctcaaaatg 2101 gcaccttgga atactgtggg tcaaaaggtc aaggaaataa ctcttaaatg ctggaatcaa 2161 tgaatcaatc aaattctctt cttcttgaaa atctcttctg aatctggctc acaatctgct 2221 ggcttcactg aggcgttggt gtatattttt gtattgactt gctgcaggaa cattttgcca 2281 cagataacgt gttttggcct taatgatggg aaatggctga cgtttggact tgtcagctca 2341 aggatgcatc cctggaaacc tgccatccct gttggccctt aaataatgga tgttatattg 2401 gcagaaggag acagaggaaa gaagggggga gtaacagaga gccgggcagt tgaaccagca 2461 ctgtcaacca tcattatgca cagagctgcc actgaagata cttctggaac ttctctggaa 2521 agggatatta atctaaagta tatatgcgca atagacagga cgtgtgagtg tgtgtgagtg 2581 agggggtatt tacatacaac tgtaaagggg tttttttttg tgcctaataa gtttaaaatt 2641 ggcttgttac attttgggcc tttgagggaa aagctggtga gagattactc ttttagcatt 2701 gtaaatttat tattctcagt cttgtatcat gaattatatt aagacacagt gttctttgct 2761 ggacttgtga tgtaggactt attccaccac aaaaaaaaaa aaaaaatagc atagagtctt 2821 cccactgtca ataatatctg gataatttgg cccatacatc cagatatgac ttgcatgaag 2881 ggtcagtggg gctctacact gaattccaga gttactctgc tccccatgtt gacagaagaa 2941 cttctgaatt aaagagggac cttgtgttgc attctaaagc aaccctcatg acttcctcac 3001 ttaagaagat tctacagtta agttacagat aatatgggga atgggaggag cagagtgatt 3061 ttggggcagt tctaaaggtg ttgtccagtt attcactgca tgagctgaaa taatattaaa 3121 taacagtgct atgaaaaaga tttaagaagg aagacaaaac caccctactt ccttctgtcc 3181 ttaaagttgt acctattccc aaattaggca attcaccttg actttttgac ctttactttg 3241 aagtgcccat tgtagacatt acaaagtgtg attgttttac ccagtttccc cattgaccta 3301 tacagaccag caatgtaggc ttttggttag cctccctcaa tccaagccct tctgtagctg 3361 ttaaacttca gagccaatat tccgaatcag caaggcaaat aggttgagaa aagtgggaat 3421 tgctgttgaa tagttctgga aggtagcaga ttggggaagg ctatcaagct ttttctgtta 3481 agtttcttga atggttgatt gccgtgttat tctggtaaca gtttgggacc tagttgaata 3541 gccttaagtg cttctatgca aaaagattta agttcaggtg cacatagaat tgatctaagt 3601 cccagggtta atagcatttt aacatgcttg gattttgatt catcatcaaa aatcgtaagc 3661 cagtgtaaat ctgatgaaag ggggagaaat gatggttttc ttttttgcat ataccatact 3721 ttccggcgta taaggtgacc tggcgtataa gacgacccct gacttcggca ccgatttcca 3781 tgcctagaaa gtcgtcttat ccgccgtaaa ctaccgtaat ttccagcata taagatgact 3841 cggcgtataa gatgatccct gactttggcg ctgatttccg cgctttagaa agtcgtctta 3901 tacgctggaa aatacggtag atccaaaata agtgttttta taactgtttg taaccaaggc 3961 agtatatatg taactttcca agacagtaga caaagctctg ataccaggca attggcaaga 4021 ttccatttaa ctctggtttg aaaatgtcct ttgaacaatg cttctcaaat tagcaacttt 4081 taaatatgtg gacttttaac ttccagaatt cctcagccat gggggagtct ggcagttgaa 4141 gtcacacaac ttaaagttgt caggattgag aaacactgcc ttagaatatg ggacttagac 4201 cagccaatct gatttgttga gtttcagttt tagcaatcaa taattgttct tggggaatca 4261 agctataatt ctcagtgcct tgcatataaa cacttgaaac accaaagcat ctcccaggtc 4321 aacaggcatt taataggtat ttggacagta ggtgataggg cggatttttt aaaggcatct 4381 atgaatgtct gaagtgattt gacttgtcca aagattacat ggcttcatct tgctttgctg 4441 ggaaatgcaa aatgataccg gtttgacaac ctctgagaac cattctcagt taaactttct 4501 gcattcccag atcaaataca ataggagcat tgaggctgct ggacgccact gaatctgcaa 4561 ggacaggatt cccatttttc ttcctacatg gaactttgtt gggctatcac caggcagcat 4621 gccatacagc tactttaagt ccagatcagc attgatgcca tgggaaggct attgctgtat 4681 ggtgtatatg tgatgcttcc gtaggtttct ggttgctatg aagttagtga atcaactctg 4741 aagagaatga ccctgtatat gtttgagagg tgtatgggac agaatcccag catctccttt 4801 ccctaccagt atgagatcct ccttgccctt ctccttctcc ttccccatct ttcccttcct 4861 gtccctctct taagatatgt aatgttgtct ggccatctgt ttggcattgt cagaacattt 4921 atcaatccat tattggagac tgattgcata gctgtgtctg caaatgtaga gcattaat //