LOCUS FN319530 1665 bp mRNA linear INV 03-SEP-2009
DEFINITION Schistosoma japonicum isolate Anhui full length mRNA clone
SJFCE3319.002|FSE001-P00009-F05, complete sequence.
ACCESSION FN319530
VERSION FN319530.1
DBLINK BioProject:PRJEA34885
KEYWORDS cap trapper; FLI_CDNA.
SOURCE Schistosoma japonicum
ORGANISM Schistosoma japonicum
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes;
Trematoda; Digenea; Strigeidida; Schistosomatoidea;
Schistosomatidae; Schistosoma.
REFERENCE 1 (bases 1 to 1665)
AUTHORS Gang L.
JOURNAL Submitted (13-MAR-2009) to the INSDC. Gang L., Build 1, 250 Bibo
Road, Pudong, Shanghai, CHINA.
REFERENCE 2
AUTHORS Liu F., Zhou Y., Wang Z.Q., Lu G., Zheng H., Brindley P.J.,
McManus D.P., Blair D., Zhang Q.H., Zhong Y., Wang S., Han Z.G.,
Chen Z.
TITLE The Schistosoma japonicum genome reveals features of host-parasite
interplay
JOURNAL Nature 460(7253), 345-351(2009).
FEATURES Location/Qualifiers
source 1..1665
/organism="Schistosoma japonicum"
/host="snail"
/lab_host="Oryctolagus cuniculus"
/isolate="Anhui"
/mol_type="mRNA"
/geo_loc_name="China:Anhui province"
/sex="mixed"
/clone="SJFCE3319.002|FSE001-P00009-F05"
/note="complete sequence of full-length cDNA"
/db_xref="taxon:6182"
CDS 23..1450
/gene="Sec61alpha"
/product="Sec61"
/note="ko:K03076 preprotein translocase SecY subunit"
/db_xref="GOA:C1LKN2"
/db_xref="InterPro:IPR002208"
/db_xref="InterPro:IPR019561"
/db_xref="InterPro:IPR023201"
/db_xref="InterPro:IPR030659"
/db_xref="UniProtKB/TrEMBL:C1LKN2"
/protein_id="CAX75258.1"
/translation="MTVKFLDIVKPFCAILPEISRPERKIQFRERVLWTGITLMIFLF
CCQIPLFGIMSSESADPLYWLRVISASNKGTLMELGISPIITSGLIMQLLAGIQVLSV
GDAPKDRALFNGAQKLFGMVITVGQASVYVMSGIYGAPSELGAGICLLIIFQLTFAGL
LVLMLDELLQKGYGLGSGISLFIATNICETIVWRAISPTTINTGRGTEFEGAIISLFH
LLATRTDKVRALREAFYRQNLPNLMNILATILVFAVVIYFQSFRVDIAVKSIRYRGQS
TSYPIKLFYTSNAPIMLQSALVSNLYVMSQMLASKFRGNFIINILGVWSDGEGGSRSV
PIGGLCYYMTPPDSLGDMLVDPIHGILYIAFMLGSCAFFSKIWIDVSNSSAKDVVKQL
KEQQTVVPGHRENSMVHELNRYIPTAAALGGLCIGALSVLADFLGAIGSGTGILMAVT
TIYQYYEVFVREQSEMGGSMSSLWL"
BASE COUNT 432 a 321 c 354 g 558 t
ORIGIN
1 attgtgattt ttgtttctga cgatgacggt taagtttttg gatatcgtta aaccgttttg
61 tgcgatttta ccggaaatct ctcgccctga acgaaagatc cagtttaggg aacgtgtatt
121 atggacagga atcactctaa tgatctttct gttttgttgc caaataccac ttttcggtat
181 catgtcatct gaatctgccg accctctgta ctggcttcga gtgatttctg cttcaaacaa
241 aggaacactc atggagctgg ggatatcccc aatcataaca tcgggtttaa ttatgcagct
301 tctcgctggg attcaggtgc tctctgttgg tgatgcaccg aaggatagag ctttatttaa
361 cggggcccag aaattatttg gtatggttat aactgttggc caggcttctg tgtatgttat
421 gtccggaatc tatggtgcac caagtgaact aggagctggg atatgtttgt taataatctt
481 tcagttgaca tttgcaggcc ttctggtcct aatgttggat gaactccttc agaaaggtta
541 tggcttaggt tcaggcatat ctttgtttat tgcaacaaat atttgtgaaa ctattgtatg
601 gagagctatc agccctacta ctatcaacac tggacgaggc actgaatttg agggtgctat
661 aatttcactg ttccatctac tggccacccg tacagacaaa gttcgtgctc ttagggaggc
721 attttatcgt cagaatctgc caaatctcat gaatatactt gcaactatac ttgtctttgc
781 agtcgttatt tactttcaga gttttagagt cgatattgca gtcaagtcga tccgatatcg
841 cggacaatca acatcctatc ctatcaagct tttttacaca agtaatgctc cgatcatgct
901 tcagagtgcg ctcgtctcta atctttatgt gatgtcacaa atgttagcta gcaaatttag
961 aggcaacttt atcatcaata ttttgggtgt ttggtccgac ggtgagggcg gctctcgatc
1021 tgtgcctatt ggtggattgt gctactacat gacgcctcca gattctttag gtgatatgct
1081 ggtagacccc atacatggca ttttgtacat tgctttcatg cttggaagct gcgccttctt
1141 tagtaaaata tggattgatg tctcgaattc tagtgctaaa gatgtagtta aacaactcaa
1201 agaacaacaa actgtcgttc caggacatcg agaaaattca atggtgcatg aactgaatcg
1261 ttacatccca acagcagccg cactaggtgg tctgtgcatt ggcgctttat cagttttggc
1321 agatttccta ggtgctattg gaagtgggac aggtattctg atggccgtca caacaattta
1381 ccaatactat gaagtttttg ttcgagagca gagcgagatg ggtggttcaa tgagctccct
1441 gtggttatag gaatatcaca tttctttctt atttatgata atgacccaat atcaaatcaa
1501 cgtgtacatt ttggtcatta tctagtgctc cacgccataa tttctgatcg ctaaacgttt
1561 catgtcttta atttttttca tagtgaaagt taaatattca tgtaattcag atcgaataag
1621 tcattcattt tatttgaatt acaatataaa ctgtacatga ggtct
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