LOCUS FN314737 1470 bp mRNA linear INV 03-SEP-2009
DEFINITION Schistosoma japonicum isolate Anhui full length mRNA clone
SJFCA3319.005|FSA001-P00015-M10, complete sequence.
ACCESSION FN314737
VERSION FN314737.1
DBLINK BioProject:PRJEA34885
KEYWORDS cap trapper; FLI_CDNA.
SOURCE Schistosoma japonicum
ORGANISM Schistosoma japonicum
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes;
Trematoda; Digenea; Strigeidida; Schistosomatoidea;
Schistosomatidae; Schistosoma.
REFERENCE 1 (bases 1 to 1470)
AUTHORS Gang L.
JOURNAL Submitted (13-MAR-2009) to the INSDC. Gang L., Build 1, 250 Bibo
Road, Pudong, Shanghai, CHINA.
REFERENCE 2
AUTHORS Liu F., Zhou Y., Wang Z.Q., Lu G., Zheng H., Brindley P.J.,
McManus D.P., Blair D., Zhang Q.H., Zhong Y., Wang S., Han Z.G.,
Chen Z.
TITLE The Schistosoma japonicum genome reveals features of host-parasite
interplay
JOURNAL Nature 460(7253), 345-351(2009).
FEATURES Location/Qualifiers
source 1..1470
/organism="Schistosoma japonicum"
/host="snail"
/lab_host="Oryctolagus cuniculus"
/isolate="Anhui"
/mol_type="mRNA"
/geo_loc_name="China:Anhui province"
/sex="mixed"
/clone="SJFCA3319.005|FSA001-P00015-M10"
/note="complete sequence of full-length cDNA"
/db_xref="taxon:6182"
CDS 27..1454
/gene="Sec61alpha"
/product="Sec61"
/note="ko:K03076 preprotein translocase SecY subunit"
/db_xref="GOA:C1LKN2"
/db_xref="InterPro:IPR002208"
/db_xref="InterPro:IPR019561"
/db_xref="InterPro:IPR023201"
/db_xref="InterPro:IPR030659"
/db_xref="UniProtKB/TrEMBL:C1LKN2"
/protein_id="CAX70469.1"
/translation="MTVKFLDIVKPFCAILPEISRPERKIQFRERVLWTGITLMIFLF
CCQIPLFGIMSSESADPLYWLRVISASNKGTLMELGISPIITSGLIMQLLAGIQVLSV
GDAPKDRALFNGAQKLFGMVITVGQASVYVMSGIYGAPSELGAGICLLIIFQLTFAGL
LVLMLDELLQKGYGLGSGISLFIATNICETIVWRAISPTTINTGRGTEFEGAIISLFH
LLATRTDKVRALREAFYRQNLPNLMNILATILVFAVVIYFQSFRVDIAVKSIRYRGQS
TSYPIKLFYTSNAPIMLQSALVSNLYVMSQMLASKFRGNFIINILGVWSDGEGGSRSV
PIGGLCYYMTPPDSLGDMLVDPIHGILYIAFMLGSCAFFSKIWIDVSNSSAKDVVKQL
KEQQTVVPGHRENSMVHELNRYIPTAAALGGLCIGALSVLADFLGAIGSGTGILMAVT
TIYQYYEVFVREQSEMGGSMSSLWL"
BASE COUNT 373 a 293 c 330 g 474 t
ORIGIN
1 acgcgttgtg atttttgttt ctgacgatga cggttaagtt tttggatatc gttaaaccgt
61 tttgtgcgat tttaccggaa atctctcgcc ctgaacgaaa gatccagttt agggaacgtg
121 tattatggac aggaatcact ctaatgatct ttctgttttg ttgccaaata ccacttttcg
181 gtatcatgtc atctgaatct gccgaccctc tgtactggct tcgagtgatt tctgcttcaa
241 acaaaggaac actcatggag ctagggatat ccccaatcat aacatcgggt ttaattatgc
301 agcttctcgc tgggattcag gtgctctctg ttggtgatgc accgaaggat agagctttat
361 ttaacggggc ccagaaatta tttggtatgg ttataactgt tggccaggct tctgtgtatg
421 ttatgtccgg aatctatggt gcaccaagtg aactaggagc tgggatatgt ttgttaataa
481 tctttcagtt gacatttgca ggccttctgg tcctaatgtt ggatgaactc cttcagaaag
541 gttatggctt aggttcaggc atatcattgt ttattgcaac aaatatttgt gaaactattg
601 tatggagagc tatcagccct actactatca acactggacg aggcactgaa tttgagggtg
661 ctataatttc actgttccat ctactggcca cccgtacaga caaagttcgt gcacttaggg
721 aggcatttta tcgtcagaat ctgccaaatc tcatgaatat acttgcaacc atacttgtct
781 ttgcagtcgt tatttacttc cagagtttca gagtcgatat tgcagtcaag tcgatccgat
841 atcgcggaca atcaacatcc tatcctatca agctttttta cacaagtaat gctccgatca
901 tgcttcagag tgcgctcgtc tctaatcttt atgtgatgtc acaaatgtta gctagcaaat
961 ttagaggcaa ctttatcatc aatattttgg gtgtttggtc cgacggtgag ggcggttctc
1021 gatctgtgcc tattggtgga ttgtgctact acatgacgcc tccagattct ttaggtgata
1081 tgctggtaga ccccatacat ggcattttgt acattgcttt catgcttgga agctgcgcct
1141 tctttagtaa aatatggatt gatgtctcga attctagtgc taaagatgta gttaaacaac
1201 tcaaagaaca acaaactgtc gttccaggac atcgagaaaa ttcaatggtg catgaactga
1261 atcgttacat cccaacagca gccgcactag gtggtctgtg cattggcgct ttatcagttt
1321 tggcagattt cctaggtgct attggaagtg ggacaggtat tctgatggcc gtcacaacaa
1381 tttaccaata ctatgaagtt tttgttcgag agcagagcga gatgggtggt tcaatgagct
1441 ccctgtggtt ataggaatat cacatttcat
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