LOCUS       FJ803206                1772 bp    cRNA    linear   VRL 25-JUL-2016
DEFINITION  Seoul virus strain CixiRn76 nucleocapsid protein gene, complete
            cds.
ACCESSION   FJ803206
VERSION     FJ803206.1
KEYWORDS    .
SOURCE      Orthohantavirus seoulense
  ORGANISM  Orthohantavirus seoulense
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae;
            Mammantavirinae; Orthohantavirus.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Lin,X.-D., Shi,N.-F., Wang,W., Huang,X.-M., Guo,W.-P., Fan,F.-N.,
            Liao,X.-W., Li,M.-H., Li,M.-F., Chen,Y., Alexander,P., Zhen,F.Fu.
            and Zhang,Y.-Z.
  TITLE     Hantavirus Infection in Rats and Humans in the Coastal Region of
            Zhejiang Province, China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Lin,X.-D., Shi,N.-F., Wang,W., Huang,X.-M., Guo,W.-P., Fan,F.-N.,
            Liao,X.-W., Li,M.-H., Li,M.-F., Chen,Y., Alexander,P., Zhen,F.Fu.
            and Zhang,Y.-Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAR-2009) National Institute of Infectious Disease
            Control and Prevention, China Center for Disease Control and
            Prevention, No.5 Liuzi, Changping District, Beijing 102206, China
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Orthohantavirus seoulense"
                     /mol_type="viral cRNA"
                     /strain="CixiRn76"
                     /isolation_source="rodent lung"
                     /host="Rattus norvegicus"
                     /db_xref="taxon:3052498"
                     /segment="S"
                     /geo_loc_name="China"
                     /collection_date="2007"
     CDS             43..1332
                     /codon_start=1
                     /product="nucleocapsid protein"
                     /protein_id="ACY73805.1"
                     /translation="MATMEEIQREISAHEGQLVIARQKVKDAEKQYEKDPDDLNKRAL
                     HDRESVAASIQSKIDELKRQLADRIAAGKNIGQDRDPTGVEPGDHLKERSALSYGNTL
                     DLNSLDIDEPTGQTADWLTIIVYLTSFVVPIILKALYMLTTRGRQTSKDNKGMRIRFK
                     DDSSYEDVNGIRKPKHLYVSSQNAQSSMKAEEITPGRFRTAVCGLYPAQIKARNMVSP
                     VMSVVGFLALAKDWTSRIEEWLGAPCKFMAESPIAGSLSGNPVNRDYIRQGQGALAGM
                     EPKEFQALRQHAKDAGCTLVEHIESPSSIWVFAGARDRCPPTCLFVGGMAELGAFFSI
                     LQDMRNTIMASKTVGTADEKLRKKSSFYQSYLRRTQSMGIQLDQRIIVMFMVAWGKEA
                     VDNFHLGDDMDPELRSLAQILIDQKVKEISNQEPMKL"
BASE COUNT          563 a          337 c          408 g          464 t
ORIGIN      
        1 tagtagtagg ctccctaaag agctactaca ctgacaagaa aaatggcaac tatggaagaa
       61 atccagagag aaatcagtgc tcacgagggg cagcttgtga tagcacgcca gaaggttaag
      121 gatgcagaaa agcagtatga gaaggatcct gatgacttaa acaagagggc actgcatgat
      181 cgggaaagtg tcgcagcttc aatacaatca aaaattgatg aattgaagcg ccaacttgcc
      241 gacaggattg cagcagggaa aaacatcggg caagaccggg atcctacagg ggtagagccg
      301 ggtgatcatc tcaaggaaag atcagcacta agctatggga atacactgga cctgaatagt
      361 cttgacattg atgaacctac aggacagaca gctgattggt tgaccataat tgtctatctg
      421 acatcattcg tggtcccgat cattttgaag gcactgtaca tgttaacaac aagaggtagg
      481 cagacttcaa aggacaacaa ggggatgagg atcagattca aggatgacag ctcatatgag
      541 gatgtcaatg gaatcagaaa gcccaaacat ttgtatgtgt caagccaaaa cgcccaatcc
      601 agcatgaaag ctgaagagat aacacctgga agattccgca cagcagtgtg tgggttatat
      661 cctgcacaga taaaggcaag aaacatggta agccctgtca tgagtgtagt tgggtttttg
      721 gcactggcaa aagactggac atctagaatt gaagaatggc ttggcgcacc ctgcaagttc
      781 atggcagagt ctcccattgc cgggagttta tctgggaatc ctgtgaatcg tgactatatc
      841 agacagggac aaggtgcact tgcaggaatg gagccaaagg aatttcaagc cctcaggcaa
      901 catgcaaagg atgctggatg tacactggtt gaacatattg agtcaccatc gtcaatatgg
      961 gtgtttgctg gggcccgtga taggtgtcca ccaacatgct tgtttgtcgg aggtatggct
     1021 gagttaggtg ccttcttttc tatccttcag gatatgagga acacaatcat ggcttcaaaa
     1081 actgtgggca cggctgatga aaagcttaga aagaaatcat cattctatca atcatacctc
     1141 agacgcactc aatcaatggg aatacaactg gaccagagga taattgttat gtttatggtt
     1201 gcctggggaa aggaggcagt ggataacttt catctcggtg atgacatgga tccagagctt
     1261 cgtagcctgg ctcagatcct gattgaccag aaagtgaagg aaatctcaaa ccaggaacct
     1321 atgaaattat aagtacataa ttatgtaatc aatactaact ataggttaag aaatactaat
     1381 cattagttaa taagaataca gatttattga ataatcatat taaataatta ggtaagttaa
     1441 ctattattta gttaagttag ctaattgatt tatatgatta tcacaattga atgtaatcat
     1501 atgcacaatc actgccatgt ataatcacgg gtatacgggt ggttttcata tggggaacag
     1561 ggtgggctta gggccaggtc accttaagtg accttttttt gtatatatgg atgtagattt
     1621 caattgatcg aatactaatc ctactgtcct cttttctttt cctttctcct tctttactaa
     1681 caacaacaaa ctacctcaca acctcctacc tcaatatata ctacctcatt aagttgtttc
     1741 cttttgtctc tttagggagc atactactac ta
//