LOCUS       FJ768792                 448 bp    RNA     linear   VRL 24-JUL-2016
DEFINITION  Hepatitis C virus isolate 28A polyprotein gene, partial cds.
ACCESSION   FJ768792
VERSION     FJ768792.1
KEYWORDS    .
SOURCE      Hepacivirus hominis
  ORGANISM  Hepacivirus hominis
            Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes;
            Amarillovirales; Flaviviridae; Hepacivirus.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Pham,D.A., Leuangwutiwong,P., Jittmittraphap,A., Luplertlop,N.,
            Bach,H.K., Akkarathamrongsin,S., Theamboonlers,A. and Poovorawan,Y.
  TITLE     High prevalence of Hepatitis C virus genotype 6 in Vietnam
  JOURNAL   Asian Pac. J. Allergy Immunol. 27 (2-3), 153-160 (2009)
   PUBMED   19839502
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Pham,D.A., Leaungwutiwong,P., Luplertlop,N., Jittmittraphap,A.,
            Bach,H.K., Akkarathamrongsin,S., Theamboonlers,A. and Poovorawan,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2009) Pediatrics, Chulalongkorn University, Rama
            IV Road, Pathumwan, Bangkok 10330, Thailand
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Hepacivirus hominis"
                     /mol_type="genomic RNA"
                     /isolate="28A"
                     /isolation_source="plasma from blood donor"
                     /host="Homo sapiens"
                     /db_xref="taxon:3052230"
                     /geo_loc_name="Viet Nam"
                     /collection_date="2008"
                     /note="genotype: 6a"
     CDS             <1..>448
                     /note="NS5B"
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="ACY37904.1"
                     /translation="FSYDTRCFDSTVTERDIRTENDIYQCCQLDPIARRAVSSLTERL
                     YVGGPMVNSKGQSCGYRRCRASGVLPTSMGNTITCYLKAQAACRAANIKDCDMLVCGD
                     DLVVICESAGVQEDTASLRAFTDAMTRYSAPPGDAPQPTYDLELITS"
BASE COUNT          104 a          119 c          128 g           97 t
ORIGIN      
        1 ttttcttatg ataccaggtg ttttgattca accgtcactg agcgggacat ccggactgag
       61 aacgacatct atcagtgttg ccagctggat cccatagcaa ggagggcagt gtcatcccta
      121 acggaacggc tctacgtagg cggccccatg gtaaattcca agggacagtc atgtggctac
      181 cgtagatgcc gcgccagtgg ggtgctgccc acgagcatgg gaaacaccat cacgtgctat
      241 ctgaaagcac aggccgcctg cagggcggcc aatatcaagg actgtgacat gttggtgtgc
      301 ggagatgact tggtggtcat ttgtgagagc gctggcgtcc aggaggacac tgcgtcactg
      361 cgagcattca cggatgctat gaccaggtac tcagctcccc ctggagacgc cccacagcct
      421 acatatgacc ttgagcttat aacatcgt
//