LOCUS FJ158652 7106 bp DNA linear HUM 12-MAY-2009 DEFINITION Homo sapiens KIR3DL1/S1 (KIR3DL1) gene, KIR3DL1*009 allele, complete cds. ACCESSION FJ158652 VERSION FJ158652.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 7106) AUTHORS Norman,P.J., Abi-Rached,L., Gendzekhadze,K., Hammond,J.A., Moesta,A.K., Sharma,D., Graef,T., McQueen,K.L., Guethlein,L.A., Carrington,C.V., Chandanayingyong,D., Chang,Y.H., Crespi,C., Saruhan-Direskeneli,G., Hameed,K., Kamkamidze,G., Koram,K.A., Layrisse,Z., Matamoros,N., Mila,J., Park,M.H., Pitchappan,R.M., Ramdath,D.D., Shiau,M.Y., Stephens,H.A., Struik,S., Tyan,D., Verity,D.H., Vaughan,R.W., Davis,R.W., Fraser,P.A., Riley,E.M., Ronaghi,M. and Parham,P. TITLE Meiotic recombination generates rich diversity in NK cell receptor genes, alleles, and haplotypes JOURNAL Genome Res. 19 (5), 757-769 (2009) PUBMED 19411600 REFERENCE 2 (bases 1 to 7106) AUTHORS Norman,P.J. and Parham,P. TITLE Direct Submission JOURNAL Submitted (25-AUG-2008) Structural Biology, Stanford University School of Medicine, 299 Campus Drive West, Stanford, CA 94040, USA FEATURES Location/Qualifiers source 1..7106 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" gene <414..>7054 /gene="KIR3DL1" /allele="KIR3DL1*009" mRNA join(<414..447,1446..1481,2226..2510,3624..3923, 5476..5769,5928..5978,6140..6244,6707..6759,6878..>7054) /gene="KIR3DL1" /allele="KIR3DL1*009" /product="KIR3DL1/S1" CDS join(414..447,1446..1481,2226..2510,3624..3923,5476..5769, 5928..5978,6140..6244,6707..6759,6878..7054) /gene="KIR3DL1" /allele="KIR3DL1*009" /codon_start=1 /product="KIR3DL1/S1" /protein_id="ACJ37426.1" /translation="MSLMVVSMACVGLFLVQRAGPHMGGQDKPFLSAWPSAVVPRGGH VTLRCHYRHRFNNFMLYKEDRIHVPIFHGRIFQEGFNMSPVTTAHAGNYTCRGSHPHS PTGWSAPSNPMVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGI SKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVT GPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTF QADFPLGPATHGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNPSSSWPSPTEPSSKSG NPRHLHILIGTSVVIILFILLLFFLLHLWCSNKKNAAVMDQEPAGNRTANSEDSDEQD PEEVTYAQLDHCVFTQRKITRPSQRPKTPPTDTILYTELPNAKPRSKVVSCP" exon <414..447 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=1 exon 1446..1481 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=2 exon 2226..2510 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=3 exon 3624..3923 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=4 exon 5476..5769 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=5 gap 5828..5927 /estimated_length=unknown exon 5928..5978 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=6 gap 5979..6078 /estimated_length=unknown exon 6140..6244 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=7 exon 6707..6759 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=8 exon 6878..>7054 /gene="KIR3DL1" /allele="KIR3DL1*009" /number=9 BASE COUNT 1878 a 1521 c 2020 g 1487 t ORIGIN 1 tttattgtca caattgctct gaaaacctta ataataccta ttagatattt tgcatattac 61 acaggaagaa gagtttgaat ctcagataaa aacaataaaa atacatgaaa agtctttcat 121 gttagcacag attttaggca tctcgtgttc gggaggttgg atctgagacg tgttttgagt 181 tggtcatagt gaaggacgcg aggtgtcaat tctagtgaga gcaatttcca ggaagccatg 241 ttccgctctt gagcgagcac ccactgggcc tcatgcaagg tagaaagagc ctgcgtacgt 301 caccctccca tgatgtggtc aacatgtaaa ctgcatgggc agggcgccaa ataacatcct 361 gtgcgctgct gagctgagct ggggcgcagc cgcctgtctg caccggcagc accatgtcgc 421 tcatggtcgt cagcatggcg tgtgttggtg agtcctggaa gggaatcgag ggagggagtg 481 cggggatgga gatctggacc tggaggtaaa gatatgggcc tagaggtgga gttatgggcc 541 tagaggtgga gttatgggcc tgaagtggag atctgggcct ggagtggaga tctgggcctg 601 gagtggagat aggggcctgg ggtggagata tgtgcctgga gtggagatct gggcctggag 661 tggagatatg ggcctggggt ggagatatgt gcctggggtg gagagatggg cctggagggg 721 agatatgggc ctggagggga gatgtgggcc tagaggtgga gtgatgggcc tagaagtgga 781 gcgatgggcc tggagtggag atatgggcct ggaggtggag ttatgggcct gcagtagaga 841 tatgggcctg aagtggagat atgggcctgg agtggagata tgggcctaga ggtggagtta 901 tgggcccgga ggtggagtta agggcatgaa gtggagatct gggcctggag tggagatatg 961 atcctggagt ggagatatgg gcctggggtg gagatacggg cctggagcag acatacaagc 1021 ctggaaagga gatatgggcc tggagaggag atagaagcct ggagtggaaa tatgggctgg 1081 agtggagata tgagcctgga gtggatatat gagcctggag ttgagatagg agcctggagt 1141 ggagatatgg gcctggagtg gacttaccag cctggagagg agatatgggc ctggagtgga 1201 gatacggacc tggagtggag atctgggcct gttgtgtaga tctaggcctg gaggtagaga 1261 tctgggcctg gaggctcagt ctctgcacag ccgagatcct tgttcctggg ggcaggtagg 1321 cagcgagggt gagtttacct tcagcccagc aagggcctgg ctgccaagac gcacagccca 1381 gtgggggcag cagggtgccc tggtttgcct gcagatggat ggtccatcat gatctttctt 1441 tctagggttg ttcttggtcc agagggccgg tccacacatg ggtgagtcct tccccaaacc 1501 ttagggtgtc atctccccac ataagaggat tttcctgaaa tgggagggaa gtcctgtcgg 1561 ggagtctctc atacactagg aagaggggac cctcggatgc tcggcccaca tttctgacct 1621 tgccctcccc ggcctttctt tccctttcct gagtcaagct ctgtgaagac tggggtgaga 1681 ctagggtgct ccaagatggg tgtgcaggga ggaagtggtg tcagcagcag agaaagagag 1741 ggaagcagtg ctaggaacag caggtcctct gaggacaaag gtgtaactca caccctccag 1801 cgtttccgtg atggtagggg ctgcagtgtg gctgcggtct ttctaccaga aaaggtgagg 1861 aaaccacagc catggccctg acattccaaa tcctctgatg ggggctcagt tcatcaattg 1921 gctgatattc cattcacata ggacttgccc tccatgccgt gtctactttg tattgtttta 1981 tatgagtaat tttgcagtat taaaatctag taagagttgc ttctccagca cttgctcaaa 2041 gttctcagct gacacttgtt gtagggagac gccaagtcta tgcaggatgg gtccttcctg 2101 tagccctggg cacccaggtg tggtaggagc cttagaaagt ggaaatgggg agaatcttct 2161 gggcactggg agtgaggggc ggctccacat cctcctctct aaggcagtgc ctccttctcc 2221 cccaggtggt caggacaagc ccttcctgtc tgcctggccc agcgctgtgg tgcctcgcgg 2281 aggacacgtg actcttcggt gtcactatcg tcataggttt aacaatttca tgctatacaa 2341 agaagacaga atccacgttc ccatcttcca tggcagaata ttccaggagg gcttcaacat 2401 gagccctgtg accacagcac atgcagggaa ctacacatgt cggggttcac acccacactc 2461 ccccactggg tggtcggcac ccagcaaccc catggtgatc atggtcacag gtcagaggct 2521 ttccgtctgg gcttctcact gtcccacctc ctgaatccca gagcttctgg tggggctgtc 2581 cgtcagggtc ccatcaccca ggccctggct gtatttgggg tcaagggaga ttgaatacag 2641 ggcaaatggg tgctgtggtg ggaagaataa ctgtccccaa tgatggctac attgtaatcc 2701 ctggagcctg tgactattta tgttataggg caggggactg aaggggaagg tggagctcag 2761 gttgttgatg agttgacctt gagatgggga gacagcctgg actgtcccac tgggctcagt 2821 gtaatcacaa gggtccgcgt gagaggtgga ggaagagggg agtggggatt agagcagtgt 2881 agtgggaggg agacgctatc agccactgcg ggctttgaag gtggaggaag accactagtc 2941 acagaatgca ggtggcctct aagggctgga gaagtcaaga gaactgattc gctgattctc 3001 cagagggaac gcagccctgt agacaccttg atttcagcac agggagaact ggatccaatt 3061 tctgtctcca gaagtggaag gggtcagtgt gttctctccc gctgccatgt ttgtggtaat 3121 tttctgcagc agcaacagga aaccaacaca ggaacccagg tcaaggacaa gttaggaaac 3181 caaacaagga tagccagatg tggtggtggg cacgagtaat ccaacgactg gggaggctga 3241 ggcaagagaa tcacttgaac tggggatttg ttcaaaagag attgattcag gctgctaaga 3301 gcctggacat gcagcctgtc ctcttccacc cccacataga cagcaggaaa gagattagtg 3361 ggaaacagat acaacagccc aagagatgag gctgtcttca cagtggcaag ggagtcaggg 3421 gctactggag acagagggac agagaagagg gaggaagaca gatggaggca cctgcaccag 3481 gggatatggg cacagaaaag acacggagat gcagagaggg aggagagaga cagacacggg 3541 gaggggaacc ctcactcatt ccaggtgcca tggatgggat gataaagaga gatgccttct 3601 aaactcacaa cttctctttc taggaaacca cagaaaacct tccctcctgg cccacccagg 3661 tcccctggtg aaatcaggag agagagtcat cctgcaatgt tggtcagata tcatgtttga 3721 gcacttcttt ctgcacaaag aggggatctc taaggacccc tcacgcctcg ttggacagat 3781 ccatgatggg gtctccaagg ccaatttctc catcggtccc atgatgcttg cccttgcagg 3841 gacctacaga tgctacggtt ctgttactca caccccctat cagttgtcag ctcccagtga 3901 tcccctggac atcgtggtca caggtgagag tgtctagaca ttgttctcat tgtcactggg 3961 acacagagtg aatgatccag gacttggaac ccccaggtgg tcatgaggaa gataagtgtg 4021 ggattcttat ggaaagagag tgacttggtg aggtctgtac caacagagac agagaaacag 4081 gagacataag tacagaacag gtgtcataac agaggacaga cacaggggcc atacagggag 4141 gtagaaaaga gagaaagagg taaaggagac actcagacag acagacatgt cccagagaga 4201 ggtgtccttc catgctgact ttgctcagag acctggcaca ggttagaagt ttcatttctg 4261 ttttacctcc acaaagtgtt cctaccagaa gaacccaagg acacccatat ttctgacctg 4321 agttgggccc tgtggcctca ggccttgtgc cacctacaga tgccgtgttt attctgacac 4381 ctctgccttc catgcaatgg agagtaatca tcccaggata tcatggcccc tgaacaccaa 4441 cccctgtatg ctgtgtgaac ttggggtccc cagactggat tctgaggctc atattccaaa 4501 taatcccaca tatgatagga tcgctgagag acacagagaa aaatcaggga caccaaaaag 4561 caaagacata aacacacaca aaatgagcca gaagaaggag attaagagat tcacagacac 4621 ataaaaagaa agaaaagagg gcagaatgga gagaatgatg gaaaggagga gagaaaagcc 4681 ccaaaatcag aaccctgagg gagggacaca aagacagaga aagataaata tgtggggatg 4741 gattgcagag attccaaata gaactagaga gactgagagg cagagaaaga caaggagacg 4801 gagagagaga gatgatagat ggatagatag acgtagatag atgataaata ggtagatgat 4861 agataatgga ttggttatag atacatagat gatgactgat agatgataca tagagatgac 4921 gatgatgatg atagacacat agatatatac atagatgata cataaataga gacagagagg 4981 cagacagaga ggtaatagag agagagatag atgatacata tatagataat agatgattga 5041 tggatagata gacagacaga caattgatag agagatagat aagtgataca taaatataga 5101 tgatagataa tttgtagata gacacaaaat agataaatag atagaaatgt gcagaaagtt 5161 atgaacaaga cagaaagtga gagactcaaa attaaagaaa aaggaagatc aagtcaacca 5221 atccaaggag ggtcagagag aataaaacaa tccaaaaagg gaaaacatac ctcagggtgg 5281 ggaagtgagg tcatagacct agagagacag aaaaggtaga aggaggaaac agatatgaag 5341 agagatgggg tggagggtga gagagagaga gagagcatta ggtcatagag caggggagtg 5401 agttctcagc tcaggtatga ggggagctat gacaaggaag aacctccctg aggaaactgc 5461 ctcttctcct tccaggtcca tatgagaaac cttctctctc agcccagccg ggccccaagg 5521 ttcaggcagg agagagcgtg accttgtcct gtagctcccg gagctcctat gacatgtacc 5581 atctatccag ggagggggga gcccatgaac gtaggctccc tgcagtgcgc aaggtcaaca 5641 gaacattcca ggcagatttc cctctgggcc ctgccaccca cggagggacc tacagatgct 5701 tcggctcttt ccgtcactct ccctacgagt ggtcagaccc gagtgaccca ctgcttgttt 5761 ctgtcacagg tgagaaaagc ccatatctct ctcatgtcct atgatcctaa atccttagct 5821 aaggagcnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 5881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnngaa acccttcaag 5941 tagttggcct tcacccacag aaccaagctc caaatctgnn nnnnnnnnnn nnnnnnnnnn 6001 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6061 nnnnnnnnnn nnnnnnnnga caattcatat agagaaactg ctatgattag cttcttactg 6121 gtgtctcctc ttcttccagg taaccccaga cacctgcaca ttctgattgg gacctcagtg 6181 gtcatcatcc tcttcatcct cctcctcttc tttctccttc atctctggtg ctccaacaaa 6241 aaaagtaagt ctcacggggc acaggccaga gagctcaggg ccatgtgggg aagcaggatg 6301 ggagcacaca gctgtgtgtt cctcactggc aggatggtcc ctggcccaag acaggagcca 6361 cagaggcagg actttctaga gagagcacca gactccctgc ccctgccttc agctcacaga 6421 ccgttgcctg attctgaact gtatcctcat gtcccctgca gccactcaca tccaggagaa 6481 ggttccatga caggcagaaa gtgggagaca gaatcaatgg gatgggaact cagagctatt 6541 catgggatgg gtccttgagc tcagagagat agaatgtctg agtctgctgt tggcaactga 6601 gggacctcag gcacctatgg cctccccctg tttgttggta tctgcttatg aaatgaggac 6661 ccagaagtgc cctccgagct cttttgttga cttccgtctc ctacagatgc tgctgtaatg 6721 gaccaagagc ctgcagggaa cagaacagcc aacagcgagg taggtgctcc tcggcccagc 6781 ctcgtggcta gtgttattcc caaacagtcc tggaaaacgt gagcaccctc cctcactcag 6841 catttccctc cctcactcag catttccctc tctccaggac tctgatgaac aagaccctga 6901 ggaggtgaca tacgcacagt tggatcactg cgttttcaca cagagaaaaa tcactcgccc 6961 ttctcagagg cccaagacac cccctacaga taccatcttg tacacggaac ttccaaatgc 7021 taagcccaga tccaaagttg tctcctgccc atgagcacca cagtcaggcc ttgaggacgt 7081 cttctaggga gacaacagcc ctgtct //