LOCUS       EU599301                 945 bp    cRNA    linear   VRL 26-JUL-2016
DEFINITION  Influenza A virus (A/duck/Egypt/906608/2006(H5N1)) matrix protein 2
            (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete
            cds.
ACCESSION   EU599301
VERSION     EU599301.1
KEYWORDS    .
SOURCE      Influenza A virus (A/duck/Egypt/906608/2006(H5N1))
  ORGANISM  Influenza A virus (A/duck/Egypt/906608/2006(H5N1))
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Polyploviricotina; Insthoviricetes; Articulavirales;
            Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus
            influenzae.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Lin,B., Malanoski,A.P., Wang,Z., Blaney,K.M., Long,N.C.,
            Meador,C.E., Metzgar,D., Myers,C.A., Yingst,S.L., Monteville,M.R.,
            Saad,M.D., Schnur,J.M., Tibbetts,C. and Stenger,D.A.
  TITLE     Universal detection and identification of avian influenza virus by
            use of resequencing microarrays
  JOURNAL   J. Clin. Microbiol. 47 (4), 988-993 (2009)
   PUBMED   19279171
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Lin,B., Malanoski,A.P., Wang,Z., Blaney,K.M., Long,N.C.,
            Meador,C.E., Metzgar,D., Myers,C.A., Yingst,S., Monteville,M.,
            Saad,M.D., Schnur,J.M., Tibbetts,C. and Stenger,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2008) Center for Bio/Molecular Science &
            Engineering, Naval Research Laboratory, 4555 Overlook Avenue, S.
            W., Washington, DC 20375, USA
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Influenza A virus
                     (A/duck/Egypt/906608/2006(H5N1))"
                     /mol_type="viral cRNA"
                     /strain="A/duck/Egypt/906608/2006"
                     /serotype="H5N1"
                     /isolate="906608"
                     /host="duck"
                     /db_xref="taxon:543839"
                     /segment="7"
                     /geo_loc_name="Egypt"
                     /collection_date="2006"
     gene            10..>945
                     /gene="M2"
     CDS             join(10..27,725..>945)
                     /gene="M2"
                     /codon_start=1
                     /product="matrix protein 2"
                     /protein_id="ACF08061.1"
                     /translation="MSLLTEPTRNEWECRCSDSSDPLVIAASIIGILHLILWILDRLF
                     FKCIYRRLKYGLKRGPSTEGVPESMREEYRQEQQNA"
     gene            10..768
                     /gene="M1"
     CDS             10..768
                     /gene="M1"
                     /codon_start=1
                     /product="matrix protein 1"
                     /protein_id="ACF08060.1"
                     /translation="MSLLTEVETYVLSIIPSGPLKAEIAQKLEDVFAGKNTDLEALME
                     WLKTRPILSPLTKGMLGFVFTLTVHSERGLQRRRFVQNALNGNGDPNNMDRAVKLYKK
                     LKREITFHGAKEVALSYSTGALASCMGLIYNRMGTVTTEVAFGLVCATCEQIADSQHR
                     SHRQMATITNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVANQARQMVQAMRT
                     IGTHPNSSAGLRDNLLENLQAYQKRMGVQMQRFK"
BASE COUNT          270 a          205 c          252 g          218 t
ORIGIN      
        1 tgttgaaaga tgagtcttct aaccgaggtg gaaacgtacg ttctctctat catcccgtca
       61 ggccccctca aagccgagat cgcgcagaaa cttgaagatg tctttgcagg aaagaacacc
      121 gatctcgagg ctctcatgga gtggctaaag acaagaccaa tcctgtcacc tctgactaaa
      181 gggatgttgg gatttgtatt cacgctcacc gtgcacagtg agcgaggact gcagcgtaga
      241 cgctttgtcc agaatgccct aaatggaaat ggagatccaa ataatatgga tagggcagtt
      301 aagctatata agaagctgaa aagagaaata acattccatg gggctaagga ggtcgcactc
      361 agctactcaa ccggtgcact cgccagttgc atgggtctca tatacaacag aatgggcaca
      421 gtgaccacgg aagtggcttt tggcctagtg tgtgccactt gtgagcagat tgcagattca
      481 cagcatcggt ctcacagaca gatggcaact atcaccaacc cactaatcag gcatgagaac
      541 agaatggtgc tggccagcac tacagctaag gctatggagc agatggcggg atcaagtgag
      601 caggcagcgg aagccatgga ggtcgctaat caggctaggc agatggtgca ggcaatgaga
      661 acaattggga ctcatcctaa ctctagtgct ggtctgagag ataatcttct tgaaaatttg
      721 caggcctacc agaaacgaat gggagtgcag atgcagcgat tcaagtgatc ctcttgttat
      781 tgccgcaagt atcattggga tcttgcactt gatattgtgg attcttgatc gtcttttctt
      841 caaatgcatt tatcgccgcc ttaaatacgg tttgaaaaga gggccttcta cggaaggagt
      901 acctgagtct atgagggaag agtatcggca ggaacagcag aatgc
//