LOCUS       EU271762                 936 bp    RNA     linear   VRL 26-JUL-2016
DEFINITION  Seneca valley virus isolate 92-48963 polyprotein gene, partial cds.
ACCESSION   EU271762
VERSION     EU271762.1
KEYWORDS    .
SOURCE      Senecavirus A
  ORGANISM  Senecavirus A
            Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
            Picornavirales; Picornaviridae; Caphthovirinae; Senecavirus;
            Senecavirus valles.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Hales,L.M., Knowles,N.J., Jones,B.H., Landgraf,J.G., Swenson,S.L.,
            House,J.A., Skele,K.L., Burroughs,K.D. and Hallenbeck,P.L.
  TITLE     Swine are susceptible to infection with Seneca Valley virus, a new
            species of picornavirus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Hales,L.M., Knowles,N.J., Jones,B.H., Landgraf,J.G., Swenson,S.L.,
            House,J.A., Skele,K.L., Burroughs,K.D. and Hallenbeck,P.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2007) Molecular Characterisation & Diagnostics
            Group, Institute for Animal Health, Pirbright Laboratory, Ash Road,
            Pirbright, Woking, Surrey GU24 0NF, United Kingdom
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Senecavirus A"
                     /mol_type="genomic RNA"
                     /isolate="92-48963"
                     /host="pig"
                     /db_xref="taxon:390157"
                     /geo_loc_name="USA: Illinois"
                     /collection_date="Sep-1992"
     CDS             <1..>936
                     /note="encodes capsid proteins VP3/VP1"
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="ABX71175.1"
                     /translation="FSLHKLTKITLPPDCPQSPCILFFASAGEDYTLRLPVDCNPSYV
                     FHSTDNAETGVVEAGNTDTDFSGELAAPGSNHTNVKFLFDRSRLLNVIKVLEKDAVFP
                     HPFPTLEGAQQDDGYFCLLTPRPTVASRPATRFGLYANPSGSGVLANTSLDFNFYSLA
                     CFTYFRSDLEVTVVSLEPDLEFAVGWFPSGSEYQASSFVYDQLHVPFHFTGRTPRAFA
                     SKGGKVSFVLPWNSVSSVLPVRWGGASKLSSATRGLPAHADWGTIYAFVPRPNEKKST
                     AAKHVAVYIRYKNARAWCPSMLPFRSYKQKMLMQSG"
BASE COUNT          180 a          276 c          221 g          259 t
ORIGIN      
        1 tttagcctgc acaagttgac aaaaattact ctaccacctg actgtccgca aagtccctgc
       61 attctctttt tcgcttctgc tggtgaggat tacactctcc gtctccccgt tgattgtaat
      121 ccttcttacg tgttccactc caccgacaac gccgaaactg gggttgttga ggcgggtaac
      181 actgacaccg atttctctgg tgaactagcg gctcctggtt ccaaccacac taacgtcaag
      241 ttcctgtttg atcgatctcg attattgaat gtaattaagg tactggagaa agacgccgtt
      301 ttccctcacc ctttccctac gctagaaggt gcgcaacagg atgatggtta cttttgtctt
      361 ctgacccccc gcccaacagt cgcttcccga cccgccactc gtttcggcct gtacgccaat
      421 ccgtccggca gtggtgttct tgctaatact tcattggact ttaactttta tagcttggcc
      481 tgtttcactt actttagatc ggacctcgag gttacggtgg tctcactgga gccagatctg
      541 gaatttgctg taggatggtt tccttccggc agtgaatacc aggcttccag ctttgtctac
      601 gaccagctgc acgtgccttt ccacttcact gggcgcactc cccgcgcttt tgctagcaag
      661 ggtgggaagg tatccttcgt gctcccttgg aactctgttt cgtctgtgct ccccgtgcgc
      721 tggggggggg cttccaagct ctcttctgcc acgcggggtc taccggcgca tgctgactgg
      781 gggactatct acgcctttgt cccccgtccc aatgaaaaga aaagcaccgc tgcaaaacac
      841 gtggccgtgt acattcggta caagaacgca cgcgcctggt gccccagcat gcttcccttt
      901 cgcagctata agcagaagat gctgatgcaa tctggc
//