LOCUS       EF146503                1538 bp    mRNA    linear   PLN 24-MAR-2009
DEFINITION  Populus trichocarpa clone WS0118_L07 unknown mRNA.
ACCESSION   EF146503
VERSION     EF146503.1
KEYWORDS    FLI_CDNA.
SOURCE      Populus trichocarpa (Populus balsamifera subsp. trichocarpa)
  ORGANISM  Populus trichocarpa
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae;
            Populus.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ralph,S.G., Chun,H.J., Cooper,D., Kirkpatrick,R., Kolosova,N.,
            Gunter,L., Tuskan,G.A., Douglas,C.J., Holt,R.A., Jones,S.J.,
            Marra,M.A. and Bohlmann,J.
  TITLE     Analysis of 4,664 high-quality sequence-finished poplar full-length
            cDNA clones and their utility for the discovery of genes responding
            to insect feeding
  JOURNAL   BMC Genomics 9, 57 (2008)
   PUBMED   18230180
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Ralph,S.G., Chun,H.J.E., Cooper,D., Kirkpatrick,R., Palmquist,D.,
            Wynhoven,B., Kolosova,N., Oddy,C., Jancsik,S., Douglas,C.J.,
            Liu,J., Butterfield,Y.S.N., Stott,J., Yang,G., Holt,R.A.,
            Siddiqui,A., Jones,S.J.M., Marra,M.A., Ritland,K. and Bohlmann,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2006) Genome BC Forest Genomics Program,
            University of British Columbia, Michael Smith Laboratories, 2185
            East Mall, Rm. 321, Vancouver, British Columbia V6T 1Z4, Canada
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Populus trichocarpa"
                     /mol_type="mRNA"
                     /cultivar="383-2499 (Nisqually-1)"
                     /db_xref="taxon:3694"
                     /clone="WS0118_L07"
                     /sex="female"
                     /tissue_type="Phloem and cambium from 8 year old trees
                     harvested within the Boise Cascade region of Washington
                     state on May 15th, 2001."
                     /clone_lib="PT-P-FL-A-2"
     CDS             108..1343
                     /note="similar to Arabisopsis thaliana At5g36230"
                     /codon_start=1
                     /product="unknown"
                     /protein_id="ABK94573.1"
                     /translation="MSSKERPTLGGTRIKTRKRNIAAPLDPAAFADAVVQIYLDNAGD
                     LELVAKSIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSIIDCEPTREV
                     ILPSVIYIQKILRRRPFLIKNLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSG
                     LPPETVFQPLLKDNLVSKGIVLSFITDFFKVYLVDNSLDDLISILKRGKMEENLLEFF
                     PSAKRSAEGFSEHFAKEGLIPLVEYNEKKIFEVKLKEMKSALTTQIAEEADISEVIDT
                     VKQRVKDAKLPDIEIVRILWDVLMDAVQWSGKNQQQNANSALRQVKTWAQLLNTFCTN
                     GKLELELVYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTILHWFRKGTNPKGRQT
                     FVKALEPFVNWLEEAEEEE"
BASE COUNT          468 a          316 c          334 g          420 t
ORIGIN      
        1 gcatactctg ccttaccaaa aaaaaaaaaa aaaaagtctc tctaaaatct cactcccaaa
       61 tctcagagat cctctctgct tccccgatcc ctctctcatc ttggtttatg agctcgaagg
      121 agagacccac tcttggtggc acgcggatta agacccgcaa acggaatatc gctgcaccac
      181 tggaccctgc agcatttgct gatgcagtgg tccagatata cttggataat gctggtgatt
      241 tggaacttgt tgctaagagc attgaatcct cagaccttaa cttctcaaga tacggtgaca
      301 ccttttttga ggttgttttc acaggaggcc gcacacaacc tggcacaaca aaacctgatg
      361 aaggggagcg ccatccttac tctataatag attgtgagcc tacaagggaa gtcattttac
      421 catctgtaat ctacatacag aaaattctga ggcgcaggcc atttctcata aagaaccttg
      481 aaaatgttat gcgaagattc ctgcagtcgc tggaactttt tgaagaaaat gaaaggaaga
      541 agctggccat tttcacggca cttgcattct cccagaaatt atctgggctg ccgccagaga
      601 ctgttttcca gcctttgctt aaggataacc ttgtgtccaa agggatagtt ctttcattta
      661 taacagactt cttcaaggtg tatctggttg ataatagcct tgatgatctg atttcaattc
      721 tgaaacgggg aaaaatggag gaaaaccttc tggagttctt cccatccgca aagcgatctg
      781 ctgaaggttt ctctgagcat ttcgccaagg aaggactgat acctctggtt gaatataatg
      841 aaaagaaaat atttgaggtg aagttgaagg aaatgaaatc tgcattaaca actcagatag
      901 cagaggaagc tgacatatct gaagtcatag acactgtgaa acaacgagtt aaagatgcta
      961 agctaccaga catcgaaatt gtgcgtattt tgtgggatgt attaatggat gctgttcaat
     1021 ggtctggcaa gaatcagcag cagaatgcca attcagcttt gcgccaggta aagacatggg
     1081 ctcaactctt aaatacattc tgcaccaatg gaaaacttga gttggaactc gtgtataaag
     1141 tccagatgca atgctatgag gatgctaagt tgatgaagct atttcctgag atagtgaggt
     1201 ctctctatga tcaggatgtg cttgcagaag acaccattct gcattggttc cgcaaaggaa
     1261 caaaccccaa gggcagacaa acctttgtga aggccctgga gcccttcgtt aattggttgg
     1321 aagaggccga ggaagaggaa taagggcagc tggatcaaat gttgttcacc tccttttatg
     1381 cttttcttag ctatctatcc attcctgaga tgataattac tcataaattt ccagctttca
     1441 taaaacttgg tgtgcctgtt ctgttgttca cgatgacaat gacaaccatt tatggctatg
     1501 ataattgcag taattaagtg ccaaaaaaaa aaaaaaaa
//