LOCUS EF118432 4008 bp DNA linear MAM 14-JUL-2016 DEFINITION Bos taurus clone CD2S3221B cluster of differentiation 2 (CD2) gene, partial cds. ACCESSION EF118432 VERSION EF118432.1 KEYWORDS . SOURCE Bos taurus (domestic cattle) ORGANISM Bos taurus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos. REFERENCE 1 (bases 1 to 4008) AUTHORS Freeman,A.R., Lynn,D.J., Murray,C. and Bradley,D.G. TITLE Detecting the effects of selection at the population level in six bovine immune genes JOURNAL BMC Genet. 9, 62 (2008) PUBMED 18838007 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4008) AUTHORS Freeman,A.R., Lynn,D.J., Murray,C. and Bradley,D.G. TITLE Direct Submission JOURNAL Submitted (14-NOV-2006) Smurfit Institute of Genetics, Trinity College Dublin, Lincoln Place, Dublin 2, Ireland FEATURES Location/Qualifiers source 1..4008 /organism="Bos taurus" /mol_type="genomic DNA" /db_xref="taxon:9913" /clone="CD2S3221B" /geo_loc_name="Togo" /note="breed: Somba" gene <1..>3212 /gene="CD2" mRNA join(<1..51,191..493,1195..1428,1920..2042,2917..>3212) /gene="CD2" /product="cluster of differentiation 2" CDS join(<1..51,191..493,1195..1428,1920..2042,2917..3212) /gene="CD2" /codon_start=3 /product="cluster of differentiation 2" /protein_id="ABO69788.1" /translation="CEILASFLLIFTVPTKGEDPESIVVWGALDHDLNLDIPGFPRSD IVADIKWNRNKNKIARIKKDMPLHNEMDKYDMFTNGTLKIKTLMRNDSGLYEVEVYDS NGVNLLSKKFDLKIQEMLSGPEINWICTNRTVSCKVENGSNPKLELFLNTTRVKQDHG KLITYTWNTRWNKTFMCVASNHVDKKVSTEIAVCPDEGLDLYLIIGICVGGAVFLLFV ALLIFYISRRKKQSRRRDDEELEIKAQRAILEERGRKTQQTPVSTPANPGMSQTPPVP GHRSQPPAHRPRALGPRVQPQQKRLPPTPGTQVHQQKGPPLPKPRVQTKPPCDAEENS " gap 1051..1150 /estimated_length=unknown gap 1524..1623 /estimated_length=unknown gap 2403..2502 /estimated_length=unknown BASE COUNT 953 a 929 c 925 g 899 t ORIGIN 1 catgtgaaat cttagccagc ttccttctga ttttcactgt tcccaccaaa ggtaagttgg 61 tgtgagggtc ttcactctca ctgttagaag cttcgttaga gaccctgaac tgagcataga 121 ggtcagaaag gtcacagccc tgcttttcct tggcagcgag tcacctcagc cactgtcttg 181 ctttttgtag gtgaagaccc tgaaagcatt gtcgtctggg gtgccctgga tcatgacctc 241 aacctggaca ttcctggttt tccaagaagt gatatagtgg cagatataaa atggaacaga 301 aacaaaaaca agattgcacg aataaagaaa gatatgccac ttcacaatga aatggacaaa 361 tatgatatgt ttacaaatgg aactctgaaa attaaaactc tgatgagaaa cgatagtggt 421 ctctatgagg tagaggttta tgattcaaat ggagtaaacc tactgagcaa aaaatttgat 481 ttgaagattc aaggtaagtc tttgacccct aaattcctcc atctcaaaat gggtgctatt 541 tagcaagcca aagagtagca tttatgcaag gtccccagcc cagatgttgg ccttggggag 601 ccctaaggga aactgaatgc attcctcctg cctcgatgca agctctagtc ttgtgggaga 661 nanagataga cgccacagct aatagaccct cgtgtctaca cactccacct ctccagaggt 721 ggtggggatg ctgatttgag tgaaggatct agattgacat ggcattaatt aggaggaggg 781 gaatcagtgg gcagaagggg gaaacggtga ccatttcagg tggatgatga aggataagct 841 atgaggctag gacggggagg ctgattgaag ggcagtgggt cttctgtccg gagagacaat 901 ttcaagccca gatgtcctga aggagtggtg gtaaggcagg aaagggctgg aaataatgta 961 ttaaaggatg aatggtttct aatctgctca acatcagcat gatcaaaggt agaaggtgtt 1021 tttgctggta tctgtagaaa atacacaggg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1141 nnnnnnnnnn cagtaagttg cctgacttga gttgtatctt tcttttcttt tcagagatgc 1201 tctcaggacc tgaaattaac tggatctgta ccaacagaac tgtgagctgc aaggtagaaa 1261 atggaagtaa tcctaaatta gaactgtttt taaatacgac ccgtgtcaaa caagatcatg 1321 ggaagctcat cacctacacg tggaacacca gatggaataa aacattcatg tgcgtggcga 1381 gtaaccatgt cgataagaaa gtcagcacgg agatcgccgt gtgtccaggt gcgtggtggg 1441 cactggtcgg gcgccacaag ttcatgtcac aatccagtct ttaaggccga acaggcaagg 1501 actgctccag ggcatgggtg cttnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1621 nnnacatcct ccttgagagg ggacagagcc ttggctcacg aagaatcagg catttctggt 1681 ccagaagaac agctctcgaa ggagccttgt gagagggctt attgtgaacc ctgcactcct 1741 tgaggtattg accttgttca ccagcctcca tgagcttagc ctccgtaagg ctgagaagtc 1801 ccatcaaagt ctttcatcct taagatggga ggcaggagtc ctcgagtcct tggccagagc 1861 aatgaaatgg cccctcttcc caggacctcc cctccatgcc gcatctgttc ctcttgcaga 1921 tgaaggtctg gatttgtacc tcatcatcgg catttgtgta ggaggcgccg tcttcctcct 1981 cttcgtggca ctactcattt tctacatcag caggaggaaa aaacagagcc gcaggagaga 2041 tggtaagctc ccccttcttc tgtcccaccg caggcctggg tgaaatcccc gtggaaacag 2101 ctcatggggc tggcacccag agtctggaaa gaaaaaactg gagatgggta gtttcagaat 2161 gtcagggcct tcactggcgg ttacaggttg ttccattttg tggttagctt gagttttgaa 2221 aaacagattc tcagtggtga caatggggga gatttgagaa gctcagtcca ggttggcctc 2281 actggaatcc accacccgaa gctgactctg tgcaaagctg tgtggtcatg ctttgaatga 2341 gacatgtgta tctatgtgga tagaaagatt agcttcaaaa caccatttct gtgaaccaac 2401 atnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2461 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngagccacc agggaagccc 2521 ctctctgact actacagatc ctattataag ggctctgacc ctgagtggtg ctacggtgtg 2581 atgcctgggg tgactctgag gcagggctgg ggtctgagtg ccctctctgc cccctggaga 2641 tccaggcatc aagttctcca gcggattcct tgcctctgac tccctgagtt ctctgaagcc 2701 ctgggctgtc cctctatctt gctggtgggc ctttctgtcc tccccctcaa gacctggagt 2761 ctctggcgag gagaggtggc ttctgccttc tcatcgtatc ctccccagag cagctagcat 2821 gctgtggtgt gcacaggagg tgcgctcggt attgttacgc cgatcctgat ttttgccaag 2881 agaactcttc agagaactct tctttgatcc ttgcagatga ggagctggag ataaaagcac 2941 agagagcaat ccttgaggaa agaggccgga agactcaaca gactccagtc tcaactcctg 3001 caaatccagg catgtcccaa actcctccag tacctggcca tcgttctcag ccccccgctc 3061 atcgtccacg ggctcttggc ccccgtgtcc agccccagca gaagaggctt cctccaacgc 3121 caggcacaca agttcaccag caaaaaggcc ctcccctccc caagcctcgc gttcaaacaa 3181 aacctccctg tgacgccgaa gaaaactcct aactctgccg cagctgtcct cttcctctca 3241 tcaaaagaga tgaaaacccg tcctttccca taaaaggcac tgtggaattt ctccactccg 3301 ggtgtgcacg cccacacctc catcctccag caagggtgct ctccaagcag accacgatcg 3361 cctccccagc ccgtgagcca caaccaagtg agttgcagtc tgtgacttct aacgcagcca 3421 ggctgcctga tgtctgcagt ctctggcccc cttccccgat caccgcttct ccaggaaggg 3481 aataaaagtg tgcacacgag gactgggtga tatagcacag attccctctc agagcacgtg 3541 cccatgtcag atgtcaagca gtcactgtgg ccgtgtcttg tacaagcagc ttcctgcttg 3601 agacactctt ggtttcttat gtgcctggtg gacacttgcc cactgtattg ggagtagcag 3661 tgaaataaaa gccttgactt gaccccaggt gtcatctagt gctgaatggg aaagaggcta 3721 tttggtgcgg tatgacagcg cgaccaaatg tggccatccc aattcaacca gttccccttc 3781 atcccccacc agaacaactg acatccactc cccaggctcc aggtgcaaaa ctggacccac 3841 ggcctactgg tagatttgta taaggaattg aaatctctat gcacacactt caataagaag 3901 caccagaaaa cataacctca tttgcagttt tacttccttg gttcttcaga caggttcatg 3961 gtgaagcatc cttgaaaaga ggggggatcc ataaagacgg gaggttcc //