LOCUS DS469774 325201 bp DNA linear CON 26-JUL-2016 DEFINITION Nematostella vectensis NEMVEscaffold_268 genomic scaffold, whole genome shotgun sequence. ACCESSION DS469774 ABAV01000000 VERSION DS469774.1 DBLINK BioProject: PRJNA12581 BioSample: SAMN02953687 KEYWORDS WGS. SOURCE Nematostella vectensis (starlet sea anemone) ORGANISM Nematostella vectensis Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella. REFERENCE 1 (bases 1 to 325201) AUTHORS Putnam,N.H., Srivastava,M., Hellsten,U., Dirks,B., Chapman,J., Salamov,A., Terry,A., Shapiro,H., Lindquist,E., Kapitonov,V.V., Jurka,J., Genikhovich,G., Grigoriev,I.V., Lucas,S.M., Steele,R.E., Finnerty,J.R., Technau,U., Martindale,M.Q. and Rokhsar,D.S. TITLE Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization JOURNAL Science 317 (5834), 86-94 (2007) PUBMED 17615350 REFERENCE 2 (bases 1 to 325201) AUTHORS Terry,A., Salamov,A., Zhou,K., Grigoriev,I., Pitluck,S., Lucas,S., Detter,J.C., Glavina del Rio,T., Shapiro,H., Lindquist,E., Putnam,N. and Rokhsar,D. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (20-JUN-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov/nematostella JGI Project ID: 3633980 Source DNA and stock culture is available from Ulrich Technau (Ulrich.Technau@sars.uib.no) Contacts: Daniel Rokhsar (DSRokhsar@lbl.gov) Annotation done by JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Location/Qualifiers source 1..325201 /organism="Nematostella vectensis" /mol_type="genomic DNA" /strain="CH2 x CH6" /db_xref="taxon:45351" /dev_stage="larval" gene complement(<3580..>6315) /locus_tag="NEMVEDRAFT_v1g129689" mRNA complement(join(<3580..3717,4517..4830,5097..5238, 6091..>6315)) /locus_tag="NEMVEDRAFT_v1g129689" /product="predicted protein" CDS complement(join(<3580..3717,4517..4830,5097..5238, 6091..>6315)) /locus_tag="NEMVEDRAFT_v1g129689" /note="GO_process: GO:7155 - cell adhesion" /codon_start=1 /product="predicted protein" /protein_id="EDO33415.1" /db_xref="InterPro:IPR000421" /translation="PHLARYSNNLAAWGAKINDDPNDYLQIDLGRVYKICAVATKGHE KNNEFVDSYKVLYSMDNLNWGTYQETAGEDKHQFEGNKDAAQVRVNWFIRQLRARYIR INPTAWHSSICLRAELFGCQESCDQSPLGLEDHSISNSHITSSSKRDQNSPAHHGRLG FTSANAWCAASDDTQPWIQFDLGADHVVCAIATQGDSKSHSWVTSYKVMYSDDAAKWF HYSEAASEKEFLIPGSKDRFDTAKHVLQRPVVAKFIRVYPVEFYSHKTMRIDAFG" gap 8248..8297 /estimated_length=50 gap 9302..10139 /estimated_length=838 gene <10164..>11795 /locus_tag="NEMVEDRAFT_v1g216661" mRNA join(<10164..10214,10606..10753,11446..>11795) /locus_tag="NEMVEDRAFT_v1g216661" /product="predicted protein" CDS join(10164..10214,10606..10753,11446..11795) /locus_tag="NEMVEDRAFT_v1g216661" /note="GO_process: GO:7155 - cell adhesion" /codon_start=1 /product="predicted protein" /protein_id="EDO33403.1" /db_xref="InterPro:IPR000421" /translation="MDNAFWATYQETPGEDKVFQRGRIKVSKSVKFPLRTPIKAKFIR FVPVEFYGHKCLRVELFGVLDEGCSEPLGLEIGAFGSNTFAASSHPDNAHFARLYSSK GWSAAEATQGQYLQIDLMSARTVSGVAIQGCEGGWVSSFVLQHGMTNSTFNDYKLDGQ YTVRENLVVQYKGRGGDRNTEF" gap 12296..14566 /estimated_length=2271 gene complement(<19091..>44195) /locus_tag="NEMVEDRAFT_v1g129707" mRNA complement(join(<19091..19365,22049..22233,22857..23178, 25682..25820,36805..36951,39396..39556,44057..>44195)) /locus_tag="NEMVEDRAFT_v1g129707" /product="predicted protein" CDS complement(join(19091..19365,22049..22233,22857..23178, 25682..25820,36805..36951,39396..39556,44057..>44195)) /locus_tag="NEMVEDRAFT_v1g129707" /note="GO_process: GO:7155 - cell adhesion" /codon_start=1 /product="predicted protein" /protein_id="EDO33416.1" /db_xref="InterPro:IPR000421" /translation="VFQGNKDGTSVVVNWFEDELVLRFFRILPKTSHRGISLRMELYG CSVCRNSSVGVSAMGIIPEYRFTASSYKDAYRPPYGRAQGARCWCAASNDDNEFLQID LGTPHTVCAVGTQGCPGTTSWSRSYRLSFSMTGILYDFYKDQCGNNQSGTFDGNNDRT SVNIHEVKFTARHIRIYPLTWNTGIALRVGLYGCSTCGMSPVGVEDMGLLPDHRITAS SFYDSRFLPKNGRLNSKTAWATKGVDQDDYLQIDLGNPVVLCGVATQGGGPDYNEFVK RYLLETSMNGYKWVAYKTQDDRQVRERHTLFPANQDKHRTSYNGLPVPIIAKFIRIFP KDHYVHKTMKVELYGVAAGQFIPTYCRMCVTLPSISDNQLTAFSNLNNQTRASAGRLY GPSAWCAKEQERSQWFQADLLKVRAVIGIATQSAASPRTWAVETYRLKMGVTQDKWTY TEVRL" gap 21561..21633 /estimated_length=73 gap 24076..24310 /estimated_length=235 gap 27249..28135 /estimated_length=887 gap 28693..29872 /estimated_length=1180 gap 40292..40341 /estimated_length=50 gene <50762..>53129 /locus_tag="NEMVEDRAFT_v1g216666" mRNA join(<50762..50836,51324..51575,51714..51882, 52936..>53129) /locus_tag="NEMVEDRAFT_v1g216666" /product="predicted protein" CDS join(50762..50836,51324..51575,51714..51882,52936..53129) /locus_tag="NEMVEDRAFT_v1g216666" /codon_start=1 /product="predicted protein" /protein_id="EDO33404.1" /translation="MKLSLVFVGVVQLSLILAHTSSRCKNCCTHGHDGKNGVPGIPAI PGKPGTPGNSGDVGRDGRPGAPGPKGPPGPKGSRGPMGVQGGTTHVNWKQCAWKKEDA RDHGLLKDCVFRKRHQNTSLRVQFVGTLRIYNCNGCCKRWFFTFNGAECNGPLTIEGV IYMDKGTGANIQNLHRVRVIKGYCTNIHKGTIRVGFNVGNCAGYGNADAHTGWNAVSR IIVEEVPPQQS" gene complement(<53648..>62479) /locus_tag="NEMVEDRAFT_v1g216667" mRNA complement(join(<53648..53728,54008..54176,55170..55271, 55516..55577,55778..55940,56199..56385,56975..57271, 59775..59831,60420..60540,61067..61261,61763..61905, 62113..>62479)) /locus_tag="NEMVEDRAFT_v1g216667" /product="predicted protein" CDS complement(join(53648..53728,54008..54176,55170..55271, 55516..55577,55778..55940,56199..56385,56975..57271, 59775..59831,60420..60540,61067..61261,61763..61905, 62113..62479)) /locus_tag="NEMVEDRAFT_v1g216667" /note="GO_process: GO:7155 - cell adhesion" /codon_start=1 /product="predicted protein" /protein_id="EDO33417.1" /db_xref="InterPro:IPR000421" /translation="MQLTKILTIAILTAFYDKLNADESKRTYIVPSTWQGRTDWGRAE LISEKDSEVVVKLTDDPTGQPRMFSKHDIAVGEVLKDRDAMIGMEVLAHVGHDLSKKP FYAKGTITSRVRPSQFTVQPSCAEKLMPIGVGVKLPPSRLKPIPDEQFKASSEYPGLP ARNGRLGNGKAWCPARKKMRNAWLQIDLCAPYYLCSVVAQGETVKMSEWVEAFTIAVS NDGMTFSSLKDENGNVKSSRDGTESILGLKLPYRYVRFFPGAYHNYPCLSVELYGVGP TRSTKSSQEFKADELFAVGDPLAPYLLVPSTWKDRVDWKLARLISHRGSDVYVKIPMV AGPPVRFSSTEVLLNVPPKSDLPVGVPVFAPFAKDKNNVVMYSEGRVTLNQGGKYFVS PFCSSLKKSLPLGVAIQSTLPVERVTSLPDSKLSATSESSSSHPAKNGRLGNTLVWCA AEGSFSSSSFTVDLGGLYHVCSVAVQGNLHDKNEFVTSFKIAMSTDGRRWTVIQDRQR NQLFKRNGKEPVEVHLAAQDSYRIIDFDEQTYLVVYIGNSGDKLVFDLLPSPASNASY KPNRESDLARGSTHANGSEKHCACAVHGLEQSDPYYCNYRNVFHIMKRAVLVIMNEPR FIDKRRVEAPLKSYLHEKALEVK" gene complement(<63660..>63944) /locus_tag="NEMVEDRAFT_v1g19118" mRNA complement(<63660..>63944) /locus_tag="NEMVEDRAFT_v1g19118" /product="predicted protein" CDS complement(<63660..>63944) /locus_tag="NEMVEDRAFT_v1g19118" /note="GO_function: GO:5509 - calcium ion binding" /codon_start=1 /product="predicted protein" /protein_id="EDO33418.1" /db_xref="InterPro:IPR001881" /translation="DIDECSRGALCPANARCINTPGSYHCACVNGYTGQGTCMDVDEC AADDGLCHKGTTCVNTMGSYRCQDINECLTDPCFEGEICVNSYGSFNCELP" gene complement(<70103..>76927) /locus_tag="NEMVEDRAFT_v1g129653" mRNA complement(join(<70103..70314,76306..76624,76766..>76927)) /locus_tag="NEMVEDRAFT_v1g129653" /product="predicted protein" CDS complement(join(70103..70314,76306..76624,76766..>76927)) /locus_tag="NEMVEDRAFT_v1g129653" /codon_start=1 /product="predicted protein" /protein_id="EDO33419.1" /db_xref="InterPro:IPR001258" /translation="IHIIGCKGRNSGEFNLPFGVAFDKKGNRLLVCDMTNQRIQVFNP DGKFIMQFGKKGKKKGQLRCPLGLAVLSSGNLLVVDKDNGRLQVFTDTGAFFKVFAKE LDLPRFVAIHNERVYVTEPRECRVSVFDCHGNRLFRFGRKGCADGELNEPTGIATNSK GHVIVSDHSNHRVQVFTADGAFITKVENPSTGKPKGHFEQAEGVAVDQEDRVYVCDTV NHRIQVIPPFWL" gene complement(86533..>94474) /locus_tag="NEMVEDRAFT_v1g247078" mRNA complement(join(86533..89180,89513..90983,93742..>94474)) /locus_tag="NEMVEDRAFT_v1g247078" /product="predicted protein" CDS complement(join(87239..89180,89513..90983,93742..94474)) /locus_tag="NEMVEDRAFT_v1g247078" /note="GO_function: GO:3824; cofactor binding - catalytic activity [PMID 48037]; GO_process: GO:8152 - metabolism" /codon_start=1 /product="predicted protein" /protein_id="EDO33420.1" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR001451" /db_xref="InterPro:IPR006163" /translation="MNNAISRAERFSSENSAFVGYAMESAQGTLHGIFSATASEFPNN IAVELKNRQMSYEALDQKSNRFARLLIEKFGIKVEEERVVAILLPRCPELYLTMLSVL KAGGAYVCIDPQHQISRLPYILQDTNAVALITTKQVESEFGLSDLTKVSILDIQSRAL NTQIASKPSNALATVVPSSHLCYIIYTSGSTGQPKGVEIEHRTVVNFIKGELEIFPVW SQDRICQGFSPSFDASVEEIWLAFGTGATLVAAPPEVMQSGPDLPDHLEQLRITVLST VPTLLRTVDVTDTKLNRLKLIILGGEACGEDLVAWADGRMLINSYGPTETTVVATTCE IKRGKKITIGRPLGNYNAHILDSNLVDVEGEKEGELCISGKCLARGYRNLPEKTKQQF VDHQLHGRIYRTGDLVRWTPDGEIEYLGRIDDQVKIRGFRVEIGSIETHLQRQENVKM AAVVVLSPSPGQQLVVAHLTLVDKTKGFQAQQAVVKMKIALPEYMIPNGYIIHEELPT LASGKVDKKKLKTLDTPPQSFNASEKYTAPRDETERIICSIWESKLCNPKISTDENFF ELGGQSVVAALVISEMRRHQFDISVRDLYTHPTVAELADFHKVRSNNVDEHQVTVHIP DSPTRGKPRYYLCWFLQALWIFGWSAAASIWIFWVFLKFIDIYSMIHAGVGVQGVAAL MLGLMVFGVPLYIVFIILWAFLTKKIFLGKEKPGAHALWSMYYMRWWIVNQAKSLVPT NLICGTPLMNIYARMMGAKIGPGVYYGTHITCEFGLIEIEAGVTLEPDVTLATHRVDK GTLFLGRISIGENSSIGTRSTVTLNTVINENCIVEPLTLVPDNTIIDANSQVKGSPAK VMKRKDNEEIKPPRWTWQWWVPCVQMALFGLFSVVYVLPYLTILVVILAIPYLRDAFS DRNWLVISMVIPPAAILSIVFDLFLTAAMKWCIVGKLKEGSYPINSSVFIKFWTMQKI IQMTLSNFRELFATLYTNIWLRSLGMEVGKFAEVSTGFNFVPDLVTLKDRTFIADHVS IGGASFRKGRFTMRKSTVGSRTFLGNNCVNMPESVIGNDVLIGVLSATPEVAVDKSSW LGSPPFLLPARAVSSQSHSLARTFNPPWYLYLSRAIWEAFKIILPTTTRLYSIFIFWV LIDDISYDVFGEFSTLFWISPAFWEVIIVFANLLFVVASKWILIGRFKPSEHPLWSSF VWRSELVASLEENVALPFGLGATLGTPFICWWYRALGSRIGKRVYLASIYLTEADLIE IGDESCIASGTTIQSHLFEDRVMKMDKLYIGSECSVCCDSIVLYGARMESRCTLMPLS LCMKSESLESDAVYCGIPARKVEAQPYHIDWELTRKQRQKHVYTANQSYIKLMGYRNL MEV" gap 94916..94965 /estimated_length=50 gap 96209..96258 /estimated_length=50 gap 98215..98313 /estimated_length=99 gap 100691..101165 /estimated_length=475 gene <101650..>107528 /locus_tag="NEMVEDRAFT_v1g129670" mRNA join(<101650..101749,101840..101896,102186..102283, 102621..102728,102835..102896,103001..103100, 103285..103411,103730..103789,103976..104054, 104486..104531,105212..105282,105554..105733, 106420..106567,107364..>107528) /locus_tag="NEMVEDRAFT_v1g129670" /product="predicted protein" CDS join(<101650..101749,101840..101896,102186..102283, 102621..102728,102835..102896,103001..103100, 103285..103411,103730..103789,103976..104054, 104486..104531,105212..105282,105554..105733, 106420..106567,107364..107528) /locus_tag="NEMVEDRAFT_v1g129670" /note="GO_component: GO:16020 - membrane" /codon_start=1 /product="predicted protein" /protein_id="EDO33405.1" /db_xref="InterPro:IPR005052" /translation="SGERHVKFEYKYSFKGPHLVNKQGSIPFWNFGGSAMPSNEQVRL TPSLRDKKGFMWTANKFTSEWWEIEVSFRVTGRGRVGADGLAIWFTEKPGEEGPVFGS SDKWTGLGVLCDSFDNDGQQNNPFVSVMVNDGTKNYEHYNDGKNQHLGGCLRDFRNRP HPVRVRVRYYQNVLTLWFHSGMSTSNEEFELCTRVENVNLPKEGGYFGLSAATGGLAD DHDAFSFSTLTLTPPKPQVGMSKDEQDKLEKQYEEYQQKLEKQKQEYAQAHPDKVKKD EEQYESVYERDIRLVYEGQNAIHHMLNQLHTKTGELTVQANALTTLVQTDHNRLGNVV TMDQTITRQEVNTLINVQQQLVQKMDEMKSSIGKMPSGGHNIDRRDIGTVDMSDKLRD IQAAVESMTHSVNHLASQKQFTGDKKATDCPPPPPMPQCVGPGYFVFLVVAQIAMLIG YITYRNQKEAAAKKFF" gap 110428..110477 /estimated_length=50 gap 111288..111337 /estimated_length=50 gap 112056..112283 /estimated_length=228 gap 113586..113635 /estimated_length=50 gene <117871..>118029 /locus_tag="NEMVEDRAFT_v1g129706" mRNA <117871..>118029 /locus_tag="NEMVEDRAFT_v1g129706" /product="predicted protein" CDS <117871..118029 /locus_tag="NEMVEDRAFT_v1g129706" /codon_start=1 /product="predicted protein" /protein_id="EDO33406.1" /translation="GGRGGRGRGRGALNQPEKSKDQLDKELDQYMSHSKGHLDAELDK YMQHADEE" gap 123891..123940 /estimated_length=50 gap 125119..125168 /estimated_length=50 gene <127041..>127535 /locus_tag="NEMVEDRAFT_v1g56637" mRNA <127041..>127535 /locus_tag="NEMVEDRAFT_v1g56637" /product="predicted protein" CDS <127041..>127535 /locus_tag="NEMVEDRAFT_v1g56637" /note="GO_component: GO:5634 - nucleus; GO_function: GO:3677; transcription factor activity - DNA binding [PMID 3700]; GO_process: GO:6355 - regulation of transcription, DNA-dependent" /codon_start=1 /product="predicted protein" /protein_id="EDO33407.1" /db_xref="InterPro:IPR001356" /translation="DQVACICDALFQEGDIKRLSQFLLSIPQEDLQNKSESLLKARAM VAFHRGCYQEVYNILENNKFDTSSHEFLQCLWYKAHYSEGEKLRGRSLSAVDKFRIRK KSPLPNTISDGEKTIYFFKEKVRTVLKECYEHKKYPTLKEKRVIATQTNLTLRQVRNW FRNRR" gap 134787..143630 /estimated_length=8844 gene complement(<146173..>159806) /locus_tag="NEMVEDRAFT_v1g247081" mRNA complement(join(<146173..146745,157461..>159806)) /locus_tag="NEMVEDRAFT_v1g247081" /product="predicted protein" CDS complement(join(146173..146745,157461..159806)) /locus_tag="NEMVEDRAFT_v1g247081" /codon_start=1 /product="predicted protein" /protein_id="EDO33421.1" /translation="MALSVLVFFPNAKSVILLSLYFGLLFQDVESNPLSSGHKNANKP QESLPQAGGLFGDFIDGGGSSCDNITCKLVFNDTDIERFQNLVDSDALAIFMFVTLSN DTLENSVKDHYSNSANKIFPFAMQLREKWAWVRNRRGKFLATLPYDFDILSLTMLTRD VYDLSLTITSFPSVCYANVSATCLQSLAAEAILNMVQAQGDVCLKVEKLKSTFKDSGY VCCRHLRGHAGRVICDVNIANNSWVEFGLGLLWAVSFLFGLLSPLLFKYLPKEFHRSG HAKRSTRGLHRSSSSSFDEFENTYRHDRLLLISKADGFLDVIRQQTESVFVSRFCRCL FVIVLSFLPILQALLYWFLKKSEVGITEQLQGVGDAFITLLEPTGKFVVLTLYCFCIL LVSIAVAIPKTLSELARRLCGRKDEKSFLGFKKPEELIVTSDKRGFQLMYENMVFHLN CLITLAFWKFTFSILLHPLFALCNSSTEGDDMAFDEKTEDEHNNNTNMWQNIFRAVFY ILLFPFWFAVTIAALIVYLLPVTYVAFRIWKMMFRVEIECKCCESIPVAVKLLSLPVL YILFIIFCICVEASYFMLILTLSFNVVFLGSVIGFTIMGIIFYIEVYIPYVVISLCCL FYVWRSATGYFAQFKRLQNALFEECERHDSEIKVEASIKETFSVPIPLERKPSASSLQ KSTKSSAFILIHYEEYDIPSIPLDLFISAFNLLLPFKRVIFAKILKVASEFLYLLAIF SFVMSLDEFSAGQPVVQALALLLLGAIPLLFQKSPHEATVTEVYIPYVVISLCCLFYV WRSATGYFAQFKRLQNALFEECERHDSEIKVEASIKETFSVPIPLERKPSASSLQKST KSSAFILIHYEEYDIPSIPLDLFISASNLLLPFKRVIFAKILKVASEFLYLLAIFSFV MSLNELSAGQPVVQALALLLLGAIPLLFQKSPHEATVTEVKWLRFHIQELIAKYCKNC " gap 151608..151657 /estimated_length=50 gap 153840..154828 /estimated_length=989 gene <160305..165181 /locus_tag="NEMVEDRAFT_v1g247082" mRNA join(<160305..160821,161061..161468,161924..162449, 163755..165181) /locus_tag="NEMVEDRAFT_v1g247082" /product="predicted protein" CDS join(160305..160821,161061..161468,161924..162449, 163755..164721) /locus_tag="NEMVEDRAFT_v1g247082" /note="GO_function: GO:5554 - molecular function unknown" /codon_start=1 /product="predicted protein" /protein_id="EDO33408.1" /db_xref="InterPro:IPR004245" /translation="MSLARLTRPLLRFYYRNPRLTILGIIILVVCLTTLGFPGSSPKI GDKLEGLRTLYSGKTSKPKVTNNDYAIPSKEYHFDEVKVDSSLFGGEKCLMLDYDPYS KAIASLQKDLGKLACSGREATKLQGHVLHVKGVGLQEVTYQSILPSKDPKVGFRLGDR MSVVMAQVQLTPGHSGSISHFLGKCVHTLGSQTRSGTQLVLYDECGQDKIEFLMEEDG TIRHKITGKCVGPKEEIAETNKGVVLIDRCDDSTRFKGLDNGFLQHMSSEMCVHFQSM DLSPPNDVPLVFYPDCEKNWKQRFGWASDFSKGKSRSTDTSTDVSEEFIKVSVQYAED LPGNVESEYHMQVSPKFDLKEPKDIVNKPNVLVFMLHSASFSHFRRKMPKTFAFLNNL AGNVFFKGFSVFDESTKSQLSALFSGIPHNKIMEFNNVDALPWLHTLHKEKGYVTLMT EDKPCSPMFSDTLCDFENAPVDHFGSPFWAAAHKTYSPGQNTFCLGTRAIHNYTLGYI RDFMTVYKVLPKFGMVLFSELSSWNANGLGYLDEDFARFLAWMKLEGHLDKTVLTIFS DHGSRHTSSRSTLQGKLEERNPFLSITIPPKGPQRLIDALPTLRKNSKNLVTAYDVYA TLRRIEPTIPKRAGGLGENLMEPLKKESRTCEGLEIPPQWCPCLSVKAADSTQPKIIE AGKKIIESVNQILSKNPEMTEKCSKVEFGKIKLATKLTPYEAVLKFKWSKAAGKCTGC EPVYGKKPDDMFYVLYVDSKQGASFRAIVNIAGKNTHVHPHIVNVKSKDKSCWKKSDN WQVCVCK" gene <165841..>167808 /locus_tag="NEMVEDRAFT_v1g129698" mRNA join(<165841..166129,167498..>167808) /locus_tag="NEMVEDRAFT_v1g129698" /product="predicted protein" CDS join(165841..166129,167498..167808) /locus_tag="NEMVEDRAFT_v1g129698" /note="GO_component: GO:5622 - intracellular; GO_function: GO:5515 - protein binding; GO_process: GO:6915 - apoptosis" /codon_start=1 /product="predicted protein" /protein_id="EDO33409.1" /db_xref="InterPro:IPR003508" /translation="MAESDRRRRPFKVCNSQRSCTIGIVAESFVEMKARGSEKLNIAR DCRVFLEEDGTEVDDEEYFSFLPDQTKLMLVEPGSSWTSKNEGKDLLSLLGTHVDFTD APEPDMARIAQRMQKDPLFFVSLPEDDLRLAIGFEPAELAAVLDRPEREASYYQETCR QELDRRTELREATELLKLYDKAVRQDIGNTEPGAKRPKN" gene complement(<172126..>172790) /locus_tag="NEMVEDRAFT_v1g2009" /pseudo CDS complement(<172126..>172790) /locus_tag="NEMVEDRAFT_v1g2009" /note="predicted protein" /pseudo /codon_start=1 gap 178757..178806 /estimated_length=50 gap 179412..179461 /estimated_length=50 gap 184099..184359 /estimated_length=261 gene <193591..>194493 /locus_tag="NEMVEDRAFT_v1g129673" mRNA <193591..>194493 /locus_tag="NEMVEDRAFT_v1g129673" /product="predicted protein" CDS <193591..>194493 /locus_tag="NEMVEDRAFT_v1g129673" /codon_start=1 /product="predicted protein" /protein_id="EDO33410.1" /db_xref="InterPro:IPR009729" /translation="LSPRQELRLVLTHIFFPSCVPEQSIVFLKTHKTGSSTLTNIFNR FADLRELKVALPLPGYNRFKWPLYFDWSSVDMYRLNGDYANVLCNHARYYRYAMDSVM ETGAKYVTILREPVSQFESTFDYMELGNLLGLQNVSNAMEVFLRRPYDFLINVTRRRQ GDFPDSLNLARNGMFFDLGLSPRHYDNRTKVLETILKLDREFSLVLIMEYYDESLVLL KRELCWDLEDIVYAKFNQRATRKKSKLSRKLRKTIKKWNSADVMLYNFFNKTFWEKIK RHGDDFYKDLKEFRQKNADLQRECV" gap 197747..198736 /estimated_length=990 gene complement(<201136..>202693) /locus_tag="NEMVEDRAFT_v1g129650" mRNA complement(join(<201136..201305,201811..201955, 202514..>202693)) /locus_tag="NEMVEDRAFT_v1g129650" /product="predicted protein" CDS complement(join(201136..201305,201811..201955, 202514..>202693)) /locus_tag="NEMVEDRAFT_v1g129650" /codon_start=1 /product="predicted protein" /protein_id="EDO33422.1" /translation="NWTPNELNCGGFVYQWREAGGKCGVCGDPYGKTQRHTEGGEFAK GVITGRYKKGQEITVEVTVTANHLGWFEFRVGDIGTPPITEEKLSYVLTQKDGSKRWK LTNPKTGKYKITLQLPSDLTCKRCVLRWWWNTGNSWGCDDEGCGLGHGAQESFVNCAD ISIE" gene <204071..>205350 /locus_tag="NEMVEDRAFT_v1g216683" mRNA join(<204071..204382,204775..>205350) /locus_tag="NEMVEDRAFT_v1g216683" /product="predicted protein" CDS join(204071..204382,204775..205350) /locus_tag="NEMVEDRAFT_v1g216683" /note="GO_component: GO:19028 - viral capsid" /codon_start=1 /product="predicted protein" /protein_id="EDO33411.1" /db_xref="InterPro:IPR004302" /translation="MAVKSILALSLLCNAVLLVHGHGYMIEPAARNACYMKFPNQCVR NYNANEQFCGGRATQIANGNKCGVCGDSYSNPSPPHVYPGKYATGFITQTYTQGQIIS VKIHITANHQGWFEYRIGKIGTPPITQSKLTQLLASAEGQTRFPLTGSGSSYETQTLV LPADLTCDHCVIQWWWKVGNTWGCENGKCGNGLGPQETFVNCADVKILPGNGVVPTQA PRPPTTQTPPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKPGTCKASGAWSGNANMDN WCEVNCAQRNCPASHCVCN" gene complement(<206103..>213347) /locus_tag="NEMVEDRAFT_v1g216684" mRNA complement(join(<206103..209079,209459..209530, 213187..>213347)) /locus_tag="NEMVEDRAFT_v1g216684" /product="predicted protein" CDS complement(join(206103..209079,209459..209530, 213187..213347)) /locus_tag="NEMVEDRAFT_v1g216684" /note="GO_component: GO:16021 - integral to membrane; GO_function: GO:1584 - rhodopsin-like receptor activity; GO_process: GO:7186 - G-protein coupled receptor protein signaling pathway" /codon_start=1 /product="predicted protein" /protein_id="EDO33423.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR001611" /translation="MKGVLVVVVLMVSLSLGEAGCPAQCLICRKELYKCTISDLSELS TTLPHNITRLSLANNSIKHLTRNSFRGLHNLRELHLQDNNDLHLDNQMLSEVLKELRS LKTLRGSELDGLTPKLINLTRTINISKNTKKENIHCYFRKMPPSKCSRSDLPKCHDAL SLNEEELSKFKTEGCAHARCTIKQTGKTLDCYTTLEGGNDTSWSILGDNSAVKLALWT FGLLAVTSNFLVLLTLLCNKEARTSALCLFVMNLLLGNILIGIHIVVLTVSDTITYGN FLRYGEGRWESSYCVPLFFVKTLGVVLVILSLVLVTAERVLVIVFHADRHLDRCRSVG YIIESWLVAIVITVVLWTKSSSWGYMCATFANSKEFNNINQGVKISLAGTGVILIFVY IYLLCRQKDKKNADMTSSEYRSTVRMLLLLISTLLLWVLPYMVLVFMVPVIISVTLSM QTLAISITINSCLHPFIYSYDNDHLEHLYSALACKKDACVLLPLAVQGQCYQPANTKE TPLPGMELERLEHVRSLESIEVRTVAPFDSRTLLSPVTVSDIKKEMKRGSEISKAEGA VIIRNTSPTGEKFVEDFTVVQVHSVPSSPSTPARHGRPLIEEHSDCGTMSSDTNVTWI SSDCPSNAHLRLGDGNSTTSSRASSIPLGKSAASPHIQRRKRLSSVKSADSEDFDDED ACNSDFSERRKRPVEFIDIEPVTDSLEESVKDLENKRDKRMSPVEMICKVLSPKMKKK RPKTGEGLPGSKHSLDSCRPHYRRSKSMVLGKDARNVKVKEDVTKPLSAVQLREKRPR GQSRENRNGVFVFPSTDNGLQGITSDSSECTPTSSEPCFQDRSRSPTEKDWERLKYLV IKPVPTHAKHKGYKETKKGKLSRSVSEPSKTKVRIYENPVVDFDNNNKVGDNRVSREN LPSSPTSLTSPLSPTRRLAKLEEGDTVPDLPKGLKSKNRMSTASTTSSKRLSNKSLEW DPSYNAYSYSEDDVMPPTPPPPPRVMNGLPPSPPPSPVSSTGTQLDPSRSQYSLDWDP TSVQMRLSIASRDSAGGISQQDECVEEIDEPTEMNGTTS" gene 238019..>245504 /locus_tag="NEMVEDRAFT_v1g173772" mRNA join(238019..238215,238402..238489,239079..239192, 239287..239370,239455..239583,239933..240028, 240128..240163,240562..240680,240898..241053, 241499..241625,241894..241974,245445..>245504) /locus_tag="NEMVEDRAFT_v1g173772" /product="predicted protein" CDS join(238100..238215,238402..238489,239079..239192, 239287..239370,239455..239583,239933..240028, 240128..240163,240562..240680,240898..241053, 241499..241625,241894..241974,245445..245504) /locus_tag="NEMVEDRAFT_v1g173772" /codon_start=1 /product="predicted protein" /protein_id="EDO33412.1" /db_xref="InterPro:IPR001611" /translation="MGDASATKEDYLKACGEKDREPNGEILAILNAAIDDQFLDPNDE FELRLHGNKRNERNEMYRRRLDDEDADILYKTLKANTFVVSLDLGYNNIGDDGAKIIG VLLQETLVLQTLILSYNDIGPEGGEIIAKGLQVNETLRVLKLNGNKIGNKGGMAIAGT LQVNTVLEELDISEVDLKTESVIAMATVLNYNNTLKVLYINRPLLFSHQEETTVHMAK MLKVNIRLRELHLTHYDIRDFGAERIMEHLVDNLTLTHLNLASNNITRDGAKQLAILL KRNTPLEMLNLAYNRIEDDGAVAIAEALAAYNTNLIKLVLCNNNIASQGLCALAKSMK SNVGLTSIYIWGNHLEEPACRAFQDLLSGGAPRIEAKDTDVQPYVVDGSDCLIEIYHV DRVNFYYLP" gene 247665..257584 /locus_tag="NEMVEDRAFT_v1g247088" mRNA join(247665..247708,247792..247911,248000..248201, 251026..251220,251592..251727,252140..252230, 252626..252701,252873..252983,253145..253198, 253656..253769,254223..254411,254723..254862, 255160..255271,255343..255456,255526..255627, 255700..255768,255841..255915,256257..256355, 256524..257584) /locus_tag="NEMVEDRAFT_v1g247088" /product="predicted protein" CDS join(247677..247708,247792..247911,248000..248201, 251026..251220,251592..251727,252140..252230, 252626..252701,252873..252983,253145..253198, 253656..253769,254223..254411,254723..254862, 255160..255271,255343..255456,255526..255627, 255700..255768,255841..255915,256257..256355, 256524..256748) /locus_tag="NEMVEDRAFT_v1g247088" /note="GO_function: GO:5554 - molecular function unknown" /codon_start=1 /product="predicted protein" /protein_id="EDO33413.1" /db_xref="InterPro:IPR005343" /translation="MADAKAASRKRRLSDMDADEFMMYGLDDDSSEDERGEEDEKQTA KVDAKISTKSKTAKHKKDLSRLQKKDPEFYKFLQDNDQTLLRFNDSDTDEEDEEESDD DDADDDEKESKQSKTKSKSKTIKKKKKKTEESDDDAKDSGNDLKDDNVEDIEDDNEKD TPEKKKGKLVTLGMIKQWRKGLESMSLQSLRQAMRAFRAGVYGALGEMLEEKKSRSKT PKIYRVEGSSVFNAIIQLCLKLVPPVLNHHVGEASIKNGKLRLPSSNEHWAEVKGVLK FYLTDILQLLRSLADPSMLCVMIKHAQQLSSYFACYPNLTKQLIKAKILFKPLFLSQA KRLQKRLVRMWGTGDEHVRVVAFLGINKLLRMLPSTLLEFCLKQLYLSFVKNAKFTSP KTKPLITFMQNSLVEVFKVNPHLTYQHAFIYIRQMAIHLRNAIINKKKDAHQSVYNWQ FIHCLHLWCRVLSEVSSQGVLDPLLYPLVQIIMGTIKLVPTCRYYPLRFHCIRSLHML SQAMKTFVPTSSFLLEILDSPEFNKRVKMSTAKPTDFSCILKVSKSQLSTKPFEDAVI DNVFELFLEFFSIHAYSIAFPELSLSTVVRLRKFIKTTKIPQYRKQMKQLLDKIEETS KEVTEQRSSVSFSPKDVKEVEQWTSEYKQHPNAIVKFYSTWKSMKPVISQHHEDEDSE VEFEGDSDSEEEKPKSKKRKSKTKERNTEKAQQKASKANARDKEIEQSENVDDMEDIV EDFRLSSGDEG" gene complement(<258056..>259861) /locus_tag="NEMVEDRAFT_v1g129669" mRNA complement(join(<258056..258234,258756..258919, 259566..>259861)) /locus_tag="NEMVEDRAFT_v1g129669" /product="predicted protein" CDS complement(join(<258056..258234,258756..258919, 259566..>259861)) /locus_tag="NEMVEDRAFT_v1g129669" /note="GO_function: GO:16787 - hydrolase activity; GO_process: GO:8152 - metabolism" /codon_start=1 /product="predicted protein" /protein_id="EDO33424.1" /db_xref="InterPro:IPR001223" /translation="SAFPSGELPALNFAFHCKDSVSTDYPYLLRCPEIENGIKECQKM GKKVLISVGGATGDGTLPSPAKAKELANTFYDLFLGGSRFDGTTNLRPFGRLVMVGID LNIQAGSGQYYEHLIREMRRLMDADLSREYLITGAPQCPYPDHYLGPGAGTELVDHLY IQFYNNFCHTGAGNDFYKSLNKWLDFANKRYPRGPLIFVGLPAATGGASDAQF" gap 263722..263771 /estimated_length=50 gap 265554..265603 /estimated_length=50 gap 266658..268180 /estimated_length=1523 gap 269223..270051 /estimated_length=829 gene complement(<270549..>281304) /locus_tag="NEMVEDRAFT_v1g173776" mRNA complement(join(<270549..270845,270966..271045, 280717..280754,281144..>281304)) /locus_tag="NEMVEDRAFT_v1g173776" /product="predicted protein" CDS complement(join(270549..270845,270966..271045, 280717..280754,281144..281304)) /locus_tag="NEMVEDRAFT_v1g173776" /codon_start=1 /product="predicted protein" /protein_id="EDO33425.1" /translation="MSETDELASKLARRTAINEGEEKPRFKIQVFNPYTEFKEFSRKQ IKEFEKMFKNYDTTIKVYLVLMNYRQAEKKHGCVHRTIGIREINTRSQLTYHVFFFQF LLIFRKSAAGELVEGSGLAELARLAEIDVDEVGVGGAATFFEAKIKQAQASSQYELEI LQEQEERKKEAELAKQRKEQFKAKKAAFAAS" gap 271082..276075 /estimated_length=4994 gap 276895..276944 /estimated_length=50 gap 277751..279379 /estimated_length=1629 gap 280308..280357 /estimated_length=50 gene complement(<283230..>283752) /locus_tag="NEMVEDRAFT_v1g233543" mRNA complement(join(<283230..283526,283720..>283752)) /locus_tag="NEMVEDRAFT_v1g233543" /product="predicted protein" CDS complement(join(283230..283526,283720..283752)) /locus_tag="NEMVEDRAFT_v1g233543" /codon_start=1 /product="predicted protein" /protein_id="EDO33426.1" /translation="MAKVTRDALSKSNAKGIKGNMKGDGMQTGGMLIVTQGGDKILLS HQQSSPGDHVANATILNALGISEASGGAGPSAQPAMECSEDACSLPTDSKPKMECNED ACSMPNN" gene 284821..297040 /locus_tag="NEMVEDRAFT_v1g192985" mRNA join(284821..285039,285481..285532,285623..286664, 287174..287233,288150..288269,289403..289489, 289728..289858,290906..291128,291444..291542, 292347..292424,292659..292756,292859..292917, 293929..293980,294184..294251,294538..294666, 296052..296121,296642..297040) /locus_tag="NEMVEDRAFT_v1g192985" /product="predicted protein" CDS join(285894..286664,287174..287233,288150..288269, 289403..289489,289728..289858,290906..291128, 291444..291542,292347..292424,292659..292756, 292859..292917,293929..293980,294184..294251, 294538..294666,296052..296121,296642..296741) /locus_tag="NEMVEDRAFT_v1g192985" /note="GO_component: GO:16020 - membrane; GO_function: GO:4245; metallopeptidase activity - neprilysin activity [PMID 8237]; GO_process: GO:6508 - proteolysis and peptidolysis" /codon_start=1 /product="predicted protein" /protein_id="EDO33414.1" /db_xref="InterPro:IPR000718" /db_xref="InterPro:IPR008753" /translation="MSNQDSSEVTHEPLLRYDDDDSFAAFGGNTAIAGDADSLEGHVI TVIRPSNNNSLHRLVRKPLFWSVIAVVFLLLACVVLSVLLAKSHHKVSQQQRVCLSAG CLDAAHYMLHAVDNKSEPCNDFFQYACGGWMKNNPIPSSEAFWGTFSWLWKKNQATIK RLLTDDSIKNSTSKAVRAARTFYDACMNLDEINNRGSKPLLELIDKIGGWSLSDSWDS SKFVFAETLKRVQIQYNTPVFFNFDVDADDKDSSSNIIKLDQAGIGIERSYYLLNETS EELTAYLEYMTRVGVLLGGKDETTVRDKMREVLRLEIQLAQIFIPPDNRSQIDQLYTK ITVKELISLCPKIPWMDFFSSAFSGVAVIKESESVVVMATEYLRALSAVISGANQTVL NDYMVWHVVEHFAPSLSSPFRDAHQALRQVLDGASKAEDLWARCISETDEAVGMALGK LFIKETFEGSSKTQATEMIDAIRAAFKRRLPYLDWMDEKTRLAAIDKADAVVDMIGYP SFIESDAELDSRYKEFTEVEYFANQLAEVKFSYKKNIGELRKPVDKNKWLMTPQTVNA YYSPSRNQIVFPAGILQAPYFDKRSPKFVNYGSIGAAVGHELVHGFDNSGRMYDKRGN YGTPWWTQKAVDGFKVKADCLIKQYNQFNYYGKNGASIRPEKAIAMLDTDPHSPNKFR VLGTLSNLKEFARAWKCPLGSPMNPVKKCVIW" gap 294720..296051 /estimated_length=1332 gene complement(<297064..>297440) /locus_tag="NEMVEDRAFT_v1g129648" mRNA complement(<297064..>297440) /locus_tag="NEMVEDRAFT_v1g129648" /product="predicted protein" CDS complement(<297064..297440) /locus_tag="NEMVEDRAFT_v1g129648" /codon_start=1 /product="predicted protein" /protein_id="EDO33427.1" /translation="MLPLPPPLPSTPMGSLTPPSPVDSYGIFPLPSPVDSYGIFPPPS PVDSYGIFPPPLPSTPMGSFPPPLPSTPMGSFPPLSRRLLWDLSPPLSRRLLWDLSPP PLSRRLLWDLLSVLTMSRLPSLQT" gene complement(<305951..>320528) /locus_tag="NEMVEDRAFT_v1g129645" mRNA complement(join(<305951..306086,306209..306259, 307571..307638,307792..307872,308549..308705, 310059..310249,311545..311688,317824..317934, 318357..318432,318795..318888,319021..319040, 319116..319279,319619..319729,320156..320288, 320407..>320528)) /locus_tag="NEMVEDRAFT_v1g129645" /product="predicted protein" CDS complement(join(305951..306086,306209..306259, 307571..307638,307792..307872,308549..308705, 310059..310249,311545..311688,317824..317934, 318357..318432,318795..318888,319021..319040, 319116..319279,319619..319729,320156..320288, 320407..>320528)) /locus_tag="NEMVEDRAFT_v1g129645" /note="GO_component: GO:5622 - intracellular; GO_function: GO:3676; 3'-5' exonuclease activity - nucleic acid binding [PMID 8408]" /codon_start=1 /product="predicted protein" /protein_id="EDO33428.1" /db_xref="InterPro:IPR002121" /db_xref="InterPro:IPR002562" /translation="LVGGIQKANSLPEAGEDHDFYYSFSDFREFRKAQGTRILNNVHD LLKQFHVRCRWPNRNTSCSNVDVDDLYESLVEANDTLLEEVDTSLDEASGLSKNRKPI LSPAVRQGGPMVSSWNRKTRDNNNKDGNFRLLLAKNIQRPQMKFKDKIDNSNTPFIPI IKYKPNALKPLDQGLASRGRGQEVQNPEDLSVPSVIADFIHQQRVNSASENPVNRISH PYEFELQRFEPPATQLKEAKEQLYDSLEDTPFTLVETVEQLESLSQKLMEAQEFAVDL EHHSYRSFLGFVCLMQISTRDHDFLVDTLELRNDLHLLNESFTNPNILKVFHGADMDV GWLQRDFGIYVVNMFDTGQASRVLALERFSLAFLLKKFCGVTADKQYQLADWRIRPLP EEMIRYAREDTHYLLYIHDRLRNELIRTGNENNNLLLSVYSRSTEVCQKHYEKPLFTS ESYMNLYTKQRRPLNPVQLRAFRALYAWRDTIARREDESYGYVLPNHMLFTIAETLPR EPQGVLACCNPVPTLVKQYVNEVHQLILQSRDASTTVRLRRYTL" gap 313176..313225 /estimated_length=50 gap 313958..314007 /estimated_length=50 gap 315245..315294 /estimated_length=50 CONTIG join(ABAV01021645.1:1..8247,gap(50),ABAV01021646.1:1..1004, gap(838),ABAV01021647.1:1..2156,gap(2271),ABAV01021648.1:1..6994, gap(73),ABAV01021649.1:1..2442,gap(235),ABAV01021650.1:1..2938, gap(887),ABAV01021651.1:1..557,gap(1180),ABAV01021652.1:1..10419, gap(50),ABAV01021653.1:1..54574,gap(50),ABAV01021654.1:1..1243, gap(50),ABAV01021655.1:1..1956,gap(99),ABAV01021656.1:1..2377, gap(475),ABAV01021657.1:1..9262,gap(50),ABAV01021658.1:1..810, gap(50),ABAV01021659.1:1..718,gap(228),ABAV01021660.1:1..1302, gap(50),ABAV01021661.1:1..10255,gap(50),ABAV01021662.1:1..1178, gap(50),ABAV01021663.1:1..9618,gap(8844),ABAV01021664.1:1..7977, gap(50),ABAV01021665.1:1..2182,gap(989),ABAV01021666.1:1..23928, gap(50),ABAV01021667.1:1..605,gap(50),ABAV01021668.1:1..4637, gap(261),ABAV01021669.1:1..13387,gap(990),ABAV01021670.1:1..64985, gap(50),ABAV01021671.1:1..1782,gap(50),ABAV01021672.1:1..1054, gap(1523),ABAV01021673.1:1..1042,gap(829),ABAV01021674.1:1..1030, gap(4994),ABAV01021675.1:1..819,gap(50),ABAV01021676.1:1..806, gap(1629),ABAV01021677.1:1..928,gap(50),ABAV01021678.1:1..14362, gap(1332),ABAV01021679.1:1..17124,gap(50),ABAV01021680.1:1..732, gap(50),ABAV01021681.1:1..1237,gap(50),ABAV01021682.1:1..9907) //