LOCUS DS268518 269674 bp DNA linear CON 11-OCT-2010 DEFINITION Caenorhabditis remanei Scfld02_111 genomic scaffold, whole genome shotgun sequence. ACCESSION DS268518 AAGD02000000 VERSION DS268518.1 DBLINK BioProject: PRJNA12588 BioSample: SAMN00627085 KEYWORDS WGS. SOURCE Caenorhabditis remanei ORGANISM Caenorhabditis remanei Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 269674) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE PCAP assembly of the Caenorhabditis remanei genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 269674) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (17-JUL-2007) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA COMMENT The organism is Caenorhabditis remanei Sudhaus, 1974; strain PB4641. This strain is derived from the wild isolate EM464. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain EM464 was established with individuals collected from a pillbug (Armadillidium vulgare) in Brooklyn, New York, NY, USA in June 1990 by Scott Baird. EM464 was described as /Caenorhabditis vulgaris/Baird, Fitch & Emmons, 1994, which was later shown to be a junior synonym of C. remanei (Sudhaus & Kiontke 1996). Annotation was added to the scaffolds in October 2010. FEATURES Location/Qualifiers source 1..269674 /organism="Caenorhabditis remanei" /mol_type="genomic DNA" /strain="PB4641" /db_xref="taxon:31234" gene complement(<5078..>5476) /locus_tag="CRE_22585" /db_xref="WormBase:WBGene00062264" mRNA complement(join(<5078..5210,5400..>5476)) /locus_tag="CRE_22585" /product="hypothetical protein" /db_xref="WormBase:CRE22585" /db_xref="WormBase:WBGene00062264" CDS complement(join(5078..5210,5400..5476)) /locus_tag="CRE_22585" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84556.1" /db_xref="WormBase:CRE22585" /db_xref="WormBase:WBGene00062264" /translation="MSPRPEDDDLVIEPADDEGLHYGNASNRWRACGAYRADSRGLKS LATMSAVFPTRSQTVNHFESVTKSK" gap 17747..18142 /estimated_length=396 gap 20478..20774 /estimated_length=297 gene complement(<23351..>25964) /locus_tag="CRE_22586" /db_xref="WormBase:WBGene00062265" mRNA complement(join(<23351..23449,23552..23849,23909..24100, 24768..25001,25288..25374,25451..25597,25921..>25964)) /locus_tag="CRE_22586" /product="hypothetical protein" /db_xref="WormBase:CRE22586" /db_xref="WormBase:WBGene00062265" CDS complement(join(23351..23449,23552..23849,23909..24100, 24768..25001,25288..25374,25451..25597,25921..25964)) /locus_tag="CRE_22586" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84566.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE22586" /db_xref="WormBase:WBGene00062265" /translation="MPIRVEDYLLGYDSRNMGIFEREQISRSIINLEWTKHIEMGSQK ESIGHQKDISALDIDEGDQMIIMASHCGQVSVANYKYLGREKWKKPMALKLDYNALQT IKWCPLDLRLFMVTTKSNWMRVCDSTMEKVINGAQFEGDVYFHWNEHNMTNSKVAVAD GSRSMKIVDFRVGMSLPQNIRWDDVPIDVVQWFPSRHHYLYAGRRDGKVGIFDVRSTR SVLAEKTIHTAPIFGIRVSKDGRRLISADRSGRIHVADTWNFQTKFQYRDEFDLHPRR RPVFEILSGKDLFVATNFHRLTVVKFDESRRIKCTESVEIAPRVLKNKPIVFRESSYE LIAGHTFNYLNVLSLAKSRQYVDEEEEASGLL" gene <26422..>32533 /gene="Cre-wdfy-2" /locus_tag="CRE_22561" /db_xref="WormBase:WBGene00062266" mRNA join(<26422..26488,27090..27291,28668..29014,29175..29292, 30104..30463,32371..>32533) /gene="Cre-wdfy-2" /locus_tag="CRE_22561" /product="CRE-WDFY-2 protein" /db_xref="WormBase:WBGene00062266" CDS join(26422..26488,27090..27291,28668..29014,29175..29292, 30104..30463,32371..32533) /gene="Cre-wdfy-2" /locus_tag="CRE_22561" /note="contains similarity to Pfam domains PF01363 (FYVE zinc finger), PF00400 (WD domain, G-beta repeat) (2)contains similarity to Interpro domains IPR000306 (Zinc finger, FYVE-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR001680 (WD40 repeat), IPR017455 (Zinc finger, FYVE-related), IPR006058 (2Fe-2S ferredoxin, iron-sulphur binding site), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="CRE-WDFY-2 protein" /protein_id="EFO84530.1" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR006058" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017455" /db_xref="PFAM:PF00400" /db_xref="PFAM:PF01363" /db_xref="WormBase:CRE22561" /db_xref="WormBase:WBGene00062266" /translation="MAAIINQRVDQTGESSMGGAKPVLLHKIAGHVARINDVILLSKD EGVWTASDDRSVRLYLKRDNDQFWPSIHHFMPVAPTCLYYSEETYKLLVGLINGNVYE FSVSDDFNSMTESRKWTCHAGPISGLGFALSAELIFSCSRDKSIVWHCSENSNKMGSY LLENSCTSMVIALPFVFVGDHGGHVTVLRIIDNQPHLVSKLSAHTNSITTLSWDGNKQ VLYSGSSDHLIIMWDIGGGKGEAYELNGHNGKVNALCAAPAAKRLFSADEHGKLMCWD MECKRVETPEWKSTDCCQKCNQPFFWNLQAMWQRKVVGLRQHHCRTCGAAVCGSCCDN WTTYPPMGYETKVRICNECAAKMKENPHNFNLTPLAICHEIRTGITAMHLQETLGLLV TSGQNRVVMIWDVRSVCSAPSGSGGP" gene complement(<33132..>37544) /gene="Cre-rab-39" /locus_tag="CRE_22587" /db_xref="WormBase:WBGene00062267" mRNA complement(join(<33132..33275,36027..36140,36968..37157, 37303..>37544)) /gene="Cre-rab-39" /locus_tag="CRE_22587" /product="CRE-RAB-39 protein" /db_xref="WormBase:WBGene00062267" CDS complement(join(33132..33275,36027..36140,36968..37157, 37303..37544)) /gene="Cre-rab-39" /locus_tag="CRE_22587" /note="contains similarity to Pfam domain PF00071 Ras family; contains similarity to Interpro domains IPR003577 (Ras small GTPase, Ras type), IPR003578 (Ras small GTPase, Rho type), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR013753 (Ras); coded for by the following C. remanei cDNAs: DY525966, DY524783, DR781290" /codon_start=1 /product="CRE-RAB-39 protein" /protein_id="EFO84560.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR013753" /db_xref="PFAM:PF00071" /db_xref="WormBase:CRE22587" /db_xref="WormBase:WBGene00062267" /translation="MESNFIGDDYGPLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAE ISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITKSYYRNSVGVLAIYDITN RESFEHVENWVKEAAQNLGGPSPGKCVFQLVGTKCDMDAQRQVNYEEGEYFAKYHKMK FIETSSRNGDNVNEAFHMIAQEIQNRVDEGELRPVDGWEGLKTGIMRSQSVCLSERSF PQNGTGGACGC" gene <39325..>40077 /gene="Cre-tag-175" /locus_tag="CRE_22562" /db_xref="WormBase:WBGene00062268" mRNA <39325..>40077 /gene="Cre-tag-175" /locus_tag="CRE_22562" /product="CRE-TAG-175 protein" /db_xref="WormBase:WBGene00062268" CDS 39325..40077 /gene="Cre-tag-175" /locus_tag="CRE_22562" /note="contains similarity to Pfam domain PF09335 SNARE associated Golgi protein; contains similarity to Interpro domain IPR015414 (SNARE associated Golgi protein)" /codon_start=1 /product="CRE-TAG-175 protein" /protein_id="EFO84541.1" /db_xref="InterPro:IPR015414" /db_xref="PFAM:PF09335" /db_xref="WormBase:CRE22562" /db_xref="WormBase:WBGene00062268" /translation="MEPKPIAASSSQSRPWLVVLIFLSFAVTLYTLYLLFPEVDNDEK LHLKYPRNLEDAKQLGRVLSKYKENNYTVVLCSVVVVYIFLQSFAIPGSIFLTILSGY LFPFYVALLLVCTCSATGAAICYTISMLIGRAAIFYLFPERITKWQEDLSQHKDNFLN YMIFLRVTPIVPNWLINIASPVLDVPLAPFFWGTFLGVAPPSFLYIQAGSTLEQMTHT SVAWSWTSVAMLTGSAILSLAPILLKKKVKAD" gene <40964..>57303 /gene="Cre-eat-3" /locus_tag="CRE_22563" /db_xref="WormBase:WBGene00062269" mRNA join(<40964..41121,48137..48281,48746..49001,50470..50711, 51722..51922,51969..52300,53158..53950,54724..55176, 56397..56664,57236..>57303) /gene="Cre-eat-3" /locus_tag="CRE_22563" /product="CRE-EAT-3 protein" /db_xref="WormBase:WBGene00062269" CDS join(40964..41121,48137..48281,48746..49001,50470..50711, 51722..51922,51969..52300,53158..53950,54724..55176, 56397..56664,57236..57303) /gene="Cre-eat-3" /locus_tag="CRE_22563" /note="contains similarity to Pfam domain PF00350 Dynamin family; contains similarity to Interpro domain IPR001401 (Dynamin, GTPase region)" /codon_start=1 /product="CRE-EAT-3 protein" /protein_id="EFO84563.1" /db_xref="InterPro:IPR001401" /db_xref="PFAM:PF00350" /db_xref="WormBase:CRE22563" /db_xref="WormBase:WBGene00062269" /translation="MMRVATRRRLLPQIGNQNLIRISSATTVPLQNGHHNFSTIYGNN GGSQRRGGLLLQKRPTVINLRSERAFIGIAAGAARHLLKLRYFLATGVIGGSVAARSW YEEWKSNLPDLALPEWFDANGSWNEFSEKMRGIKDGFGKSGIDGKQKWAEWMAKFEEF KQQQKDKKDENNEGGGSGGGGDVPGKEPLVLASLMSAFSSKKDEKDEEKKDTTTSAEE RIQKLQEEMLKTQSQYQRELERLEKENKVLKQRLLLSDDKAAHRLKRLKRSLIDMYSE VLDLLNEYDSSYNTSDNLPRVVVVGDQSAGKTSVLEMVAQARIFPRGSGEMMTRAPVK VTLSEGPYHVAQFRDSSREFDLTKESDLQQLRNETEVRMRNSVRDGKTVSNEVISLTV KGPNLPRMVLVDLPGVISTVTADMARETKDDIIRMSKAHMENPNAIILCIQDGSVDAE RSNVTDLVSSIDPSGKRTILVLTKVDMAEKNLANPDRIKKILEGKLFPMKALGYFGVV TGRGNSSDSIDEIRKYEENFFNSSQLLRDGVLKPSQMTTRNMSLAVSDCFWRMVRDSI ESQTDAFRAAKFNLEAEWKNHFLRIRQLNRDELYDKARGEILDEIVNLSLIGVEEWER LLQEKLWSEISSHVFDQILMPAYASSSSGSFNTTVDIKLKHFADKQLAQKSIETGWDT LKEVFFKQINQDARTRKDHDPVFDPLKEAVIEEAMLTHGWDDKAMDYLRVIQLNAMED RAVQDKRSWDSACNFLQKAATERLNAVKNQLKEDRGPGWTSRWLMWKTPTVDNHYSCV IQDELQAILTADPEHKQALTDDDITVIRRNIETKGVIEIPTESIRKQWKLVFKKHFLE RIISSSKDCQSMYQMYRQGMIEGQDIDCQTIVLFYRIQKMVNLTCNALRQQITNTEHR RLEKEIKEVLDDWSQEPDIKKKYLTGRRVELAEEIQQVRRIQEKLEEFMAQLQREKV" gap 43442..44096 /estimated_length=655 gene <57674..>60530 /locus_tag="CRE_22564" /db_xref="WormBase:WBGene00062270" mRNA join(<57674..57790,58709..58850,59397..59633, 60319..>60530) /locus_tag="CRE_22564" /product="hypothetical protein" /db_xref="WormBase:CRE22564" /db_xref="WormBase:WBGene00062270" CDS join(57674..57790,58709..58850,59397..59633,60319..60530) /locus_tag="CRE_22564" /note="contains similarity to Pfam domain PF02893 GRAM domain; contains similarity to Interpro domain IPR004182 (GRAM); coded for by the following C. remanei cDNAs: DR779803, DR779913" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84532.1" /db_xref="InterPro:IPR004182" /db_xref="PFAM:PF02893" /db_xref="WormBase:CRE22564" /db_xref="WormBase:WBGene00062270" /translation="MSINTANTPDGLGVLLYNGETIVIFARGVEMTLGTSQNQNLEGR RQGTIYLTSHRIIFMPDAGGWLKSFEIPFNNMQDVNLNQPIFGANYLCGTATAVQGGQ MRGEVPWRMTFNRGGCIEFGQSLLQAVERASRMRPQNAPPAYSPPIGDFYSAPPAYYQ PSPDQGPNGFNPTTDSFPDQPNPSSVFMSSAPPPYPGIGPERGPHPTEELHVAGQFEA PPAYSGGETAEGLRRRN" gene <61833..>66253 /gene="Cre-eif-3.F" /locus_tag="CRE_22565" /db_xref="WormBase:WBGene00062271" mRNA join(<61833..62090,62781..63295,65001..65139, 66176..>66253) /gene="Cre-eif-3.F" /locus_tag="CRE_22565" /product="CRE-EIF-3.F protein" /db_xref="WormBase:WBGene00062271" CDS join(61833..62090,62781..63295,65001..65139,66176..66253) /gene="Cre-eif-3.F" /locus_tag="CRE_22565" /note="contains similarity to Pfam domain PF01398 Mov34/MPN/PAD-1 family; contains similarity to Interpro domains IPR000555 (Mov34/MPN/PAD-1), IPR003639 (Mov34-1); coded for by the following C. remanei cDNAs: DT935615, DR781324, DR778428" /codon_start=1 /product="CRE-EIF-3.F protein" /protein_id="EFO84547.1" /db_xref="InterPro:IPR000555" /db_xref="InterPro:IPR003639" /db_xref="PFAM:PF01398" /db_xref="WormBase:CRE22565" /db_xref="WormBase:WBGene00062271" /translation="MRFFINSINFSRSLTLFDSPPTPPHFQGSGVQFTIMASNLTVNV HPGVYMNVVDTHMRRSKNSQKAAGQEKCMGTLMGYYEKGSIQVTNCFAIPFNESNDDL EIDDQFNQQMISALKKTSPNEQPVGWFLTTSDITSSCLIYHDYYVRVITEASARRESP PIVVLTIDTTFSGDMAKRMPVRAYLRSKAGIPGAAGPHCAIFNPLRVELAAFPGELVA LQLMEKALDSRRREATLESGLEQLEVSTAQMIEWLERMLSYVEGVNKDGEKPGDAQMG RQLMDIVTSSSNNMQPEKLDTLVKNTLRDYVMVSYLAKLTQTQLQVHERLVSA" gene <67572..>79284 /gene="Cre-scp-1" /locus_tag="CRE_22566" /db_xref="WormBase:WBGene00062272" mRNA join(<67572..67645,68055..68197,68246..68677,69390..69484, 69537..69641,70436..70843,71831..72263,74251..74341, 74589..75003,75832..76049,76704..76902,77439..77921, 78730..78855,79171..>79284) /gene="Cre-scp-1" /locus_tag="CRE_22566" /product="CRE-SCP-1 protein" /db_xref="WormBase:WBGene00062272" CDS join(67572..67645,68055..68197,68246..68677,69390..69484, 69537..69641,70436..70843,71831..72263,74251..74341, 74589..75003,75832..76049,76704..76902,77439..77921, 78730..78855,79171..79284) /gene="Cre-scp-1" /locus_tag="CRE_22566" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR000731 (Sterol-sensing 5TM box), IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="CRE-SCP-1 protein" /protein_id="EFO84527.1" /db_xref="InterPro:IPR000731" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE22566" /db_xref="WormBase:WBGene00062272" /translation="MNDQMKRRWKEAKERIGNAYHDYGRLCAAHPKTCLSMSLLTMIV LSYPTITRLRLPVSTPIDVFWSEHLHVNEKIAPFWINENPASYIQQFIVSTTVTPWNA TEMTPEQAVRAAVATSFRIRNVLLAEPSVEELCLRLANQRTDSTWPFRSKSLCVVLSP ATIWFNNLQRFREDDDVIETVFNEQCKTTFCMRDLLLGAPVAATGIKQKYQTNRKRKI EFAVTIFFARYSKRVIQGLREKLQKEFELVETPPNDERTFVQVYFHPLKTFSSYLPLI STYFVCMLYVYYSCRKIQMVASRWGLAFASCFTVASTLLMTTGICAHLDLSTTTWGSE VYPYIALIMGLENTLCITRSVVYTSPSLDVSSRIAHGLSQEGYKLTKYYILELVALLI GFMTRISDIQEFCQFSVICVTVDFYMQLFFYAPCLTFDLQRLGLEEKRKFAEILLYEE IPRLKNYAPISCPMRKVWPKLFVMKKMQKRRLSDSGVDDVRKDSTQQRLLMDSKDDGD VPIPRPEDSVRMKIMYFITRTRIVQRTILVVFAIWTVVLVFFVGSRQLGMEMNLTNQS IESLTRSHRILSTANLQYGNWQRRTYKWWPAVAHEYNISLNSRYVTFLPPIVINANIH PSDILLQKVEKSLESSKNPGEVTEEDAPVLRSRIDWLEMQLKMYLAAFWILLITTVIS FFAYVFLSDRWKVGGVKQLKEQIPSGGEIDGNSGTNGNGAGQTQKNFVETLPIVYQGH RFPIESVAIDELDTSSFVSCCQEGIVFVWNTQTGQRTLRINRLRAVPEKGKEIPQAPK IWALAKRNDIIILGCCDGSIEIASISRNKLIGLYTKSTIGVSHIVCRNDDVAVVRLDG SIEFLTVDYDEAEGKVVFRKTSKHFQLRVRQIELLKSLRAHQKPICRVATWQSQSQLI TSSFDRSIKMWNWNSEGDASRIEMSNVFLAHNSPVVNLAVDESQSIMYSSCEEGVICW WNLSTGELIRTIDNNCTWAFQLATSSEFLLGFYGSSQLYMWNVENGQLACRVTDALGD GTSEDTLYTVGSSGVVSFDDQIAATASSDSVTFWDLKHRAIIGKVKLNGKISSMRKLT TQSVLCGVDNSMYAVTVPLVRFK" gap 73071..73080 /estimated_length=10 gap 77109..77244 /estimated_length=136 gene <80086..>85229 /gene="Cre-ttll-12" /locus_tag="CRE_22567" /db_xref="WormBase:WBGene00062273" mRNA join(<80086..80318,80540..80648,80924..81577,82049..82528, 83628..83782,83855..84052,84995..>85229) /gene="Cre-ttll-12" /locus_tag="CRE_22567" /product="CRE-TTLL-12 protein" /db_xref="WormBase:WBGene00062273" CDS join(80086..80318,80540..80648,80924..81577,82049..82528, 83628..83782,83855..84052,84995..85229) /gene="Cre-ttll-12" /locus_tag="CRE_22567" /note="contains similarity to Pfam domain PF03133 Tubulin-tyrosine ligase family; contains similarity to Interpro domains IPR001214 (SET), IPR004344 (Tubulin-tyrosine ligase)" /codon_start=1 /product="CRE-TTLL-12 protein" /protein_id="EFO84543.1" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR004344" /db_xref="PFAM:PF03133" /db_xref="WormBase:CRE22567" /db_xref="WormBase:WBGene00062273" /translation="MSEERVDYPFSTFLDQHSGQLNASAVPPELWHSLYKKLADQTFD AGDRFQIICEMNEDDEKTLFVRALEDMHNNDEENIFLIDHFVSFSSESARKCVETTEG LAEKLASLFGIDTDSLCEGDDTTEKIETSIEKEEQEHARRLSDSDVTPGLPRHESIDA RLSSYSVDDPKSELTEKVMKSLWKYAQTYSISYQLENGEIEKKHVWYVMDDFGSRVRH SAEPNVRIVPLMFLPQNCAYSIMFLTKPVKTDEEITMDWAANVITAQNPQWRKYIENP WAPMDFSKESMVPGAPTMEYFTSGRNPDFLAEGKEQQTAQSAIFTSLPILKKRKIKVY ADDTQLTEHLKTHQIEYVDDWKKADVIWMIKHFHDYNQLSTENPCGMVNQFPFESCIT VKDLLAACAMRDPVKNDWYQLTYNLNTQLPEFVSRFQNREKNGQHNVWIVKPWNLARG MEMTVTQDLNQIIRMVETGPKVRRVWVLGYCSFITKNCENSKIVCEYIPRPLLFPRPD NGNKVKFDLRYIVFLNGISPVTAYVYNRFWIRFAINEFQLSNFDDLETHFTVFNYLDK EKVLQMKCEQFIKTIEKTYPKIQWDNVQKDINSTIRKAIEAAAKEEAPRGVAPNIQSR AMYGVDIMLQHSPENDDVIKSTLLEINFMPDTTRACQYYPDFADTVFDTLFLDDIDPT KVTPI" gene complement(<85940..>88172) /locus_tag="CRE_22588" /db_xref="WormBase:WBGene00062274" mRNA complement(join(<85940..86395,87415..87537,87588..>88172)) /locus_tag="CRE_22588" /product="hypothetical protein" /db_xref="WormBase:CRE22588" /db_xref="WormBase:WBGene00062274" CDS complement(join(85940..86395,87415..87537,87588..88172)) /locus_tag="CRE_22588" /note="coded for by the following C. remanei cDNAs: DT933910" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84542.1" /db_xref="WormBase:CRE22588" /db_xref="WormBase:WBGene00062274" /translation="MRLPVVILSLFPLAFGSVLDSFRANGIEFEVYGEGRLIPEKQHC VPYTLDLNEFVNSFNTNNMNEYSRGLLQKRIFTSFDAICRKFHIGVNAESPSYNLTED RTQMRYLDYFDYNWNSLRFERDLKSLFLENKINNPFLDTVTEETIKRAGASDISDFAQ KTTVFPKMCNVNQMTVDTMICFNISDIPQSGTIYALAHGGEFLHNEEVYAYYDIPQFV LITQQAVIPIELEKCKVLFGTYIYCFEEFDTQCDVRTLSDCPILAYKTDDDFVFRRNF GIGYIYATTESEVDLYHNGTRQVVPSRVFILRTSYGTPDSENGQPVMLPDMTPHQESE TSQFAALLPESQKILKSDTPTRLFQTQRRGVNALSHKHNDHGAWDNIRDFFGF" gene complement(<92735..>96972) /gene="Cre-aqp-2" /locus_tag="CRE_22589" /db_xref="WormBase:WBGene00062275" mRNA complement(join(<92735..92897,94632..95100,95972..96098, 96880..>96972)) /gene="Cre-aqp-2" /locus_tag="CRE_22589" /product="CRE-AQP-2 protein" /db_xref="WormBase:WBGene00062275" CDS complement(join(92735..92897,94632..95100,95972..96098, 96880..96972)) /gene="Cre-aqp-2" /locus_tag="CRE_22589" /note="contains similarity to Pfam domain PF00230 Major intrinsic protein; contains similarity to Interpro domains IPR000425 (Major intrinsic protein), IPR012269 (Aquaporin); coded for by the following C. remanei cDNAs: DR407801, DT934859, DR407069, DT934408, DY526359, DR409618" /codon_start=1 /product="CRE-AQP-2 protein" /protein_id="EFO84554.1" /db_xref="InterPro:IPR000425" /db_xref="InterPro:IPR012269" /db_xref="PFAM:PF00230" /db_xref="WormBase:CRE22589" /db_xref="WormBase:WBGene00062275" /translation="MVLDKLRAKFHIRKDLGRAFLAEFTGTFLLCLIGLSVVAQKVLP RPEVNEFIGVNVGFGIAIVFGVAVSAKLSGGHINPAVSLAFLSIGQITIVQFLAYFVA QFLGAFFGAAVVYAVYNDAINAFDGGVRTVGGLKDTAGIFASYPAPHLGLLNGFVDQF VATAVFVFLIAHIVDKRNSYPTWLQPILVGTGFVAIGAAFGYNCGYPVNPARDFAPRL FTAIFYGGAVFTKWFWVPIVGPFVGAVVGIWFYYFLIGFHTPQDAEEKYVVLTGNQEL KPLTAKE" gene 93066..93138 /locus_tag="CRE_32327" /pseudo /db_xref="WormBase:WBGene00186735" tRNA 93066..93138 /locus_tag="CRE_32327" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CRE32327" /db_xref="WormBase:WBGene00186735" gap 107990..107999 /estimated_length=10 gap 110179..110871 /estimated_length=693 gene <118067..>119219 /locus_tag="CRE_22568" /db_xref="WormBase:WBGene00062276" mRNA join(<118067..118272,119204..>119219) /locus_tag="CRE_22568" /product="hypothetical protein" /db_xref="WormBase:CRE22568" /db_xref="WormBase:WBGene00062276" CDS join(118067..118272,119204..119219) /locus_tag="CRE_22568" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84539.1" /db_xref="WormBase:CRE22568" /db_xref="WormBase:WBGene00062276" /translation="MPSFHILVILLLLATTIVSSFILQDLPLERFERSGGHDELFAPQ QFERHSRSGHVYRPGGNFWQRYRYRMMSG" gene <123137..>125272 /gene="Cre-gst-13" /locus_tag="CRE_22569" /db_xref="WormBase:WBGene00062277" mRNA join(<123137..123362,124358..124671,125192..>125272) /gene="Cre-gst-13" /locus_tag="CRE_22569" /product="CRE-GST-13 protein" /db_xref="WormBase:WBGene00062277" CDS join(123137..123362,124358..124671,125192..125272) /gene="Cre-gst-13" /locus_tag="CRE_22569" /note="contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain), PF02798 (Glutathione S-transferase, N-terminal domain); contains similarity to Interpro domains IPR012335 (Thioredoxin fold), IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR010987 (Glutathione S-transferase, C-terminal-like)" /codon_start=1 /product="CRE-GST-13 protein" /protein_id="EFO84537.1" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR012335" /db_xref="PFAM:PF00043" /db_xref="PFAM:PF02798" /db_xref="WormBase:CRE22569" /db_xref="WormBase:WBGene00062277" /translation="MVHYKLTYFLSRGLADVSRQLFHLAGVEFEDERLNRDQFLERKE SFPFKQVPVLTVDGLEIPQSMAIARYLATKFGFAGKTPEESALVDAFVDQFKDFYAEI HDYFYTMLGFTQLDGEEQKEKVLIPARDKFLPLLAKFLAKSKSGFLVDSGITFADLII VDDMTTLINWWPQYADGYPEILAWRERVMNYPKLKEYIEKRPVTMA" gene complement(<126144..>128520) /locus_tag="CRE_22590" /db_xref="WormBase:WBGene00062278" mRNA complement(join(<126144..126153,127204..127481, 127716..128025,128082..128288,128408..>128520)) /locus_tag="CRE_22590" /product="hypothetical protein" /db_xref="WormBase:CRE22590" /db_xref="WormBase:WBGene00062278" CDS complement(join(126144..126153,127204..127481, 127716..128025,128082..128288,128408..128520)) /locus_tag="CRE_22590" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84567.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE22590" /db_xref="WormBase:WBGene00062278" /translation="MCFWNIDTSIPKQKPFLIMKLPLVPFKLVTEFMDSNEIIKLSMC SYRLECFLRISKYKLKKLNVHLSDHRLRYDLTQLNNRSRIFFRKQKSEKQLEPVSKMQ QLCERYYGEDNTILNIEYFSSNTVFDLFKCISALFSCPSVGWNFYLDQLSTDTMMHYL NLSLAEKCTGFSFMRCSLSTPLLTELMDKIPVSKLLEIGSDIPIDFKHPNALKYYVTR YHNGRWITLNDLKSVRNVGWIELKSTIFNCSDVNQFLRYWVNCEEDMLELLELNLREG AIIDEDVLTDQLITVHVEGASSTDFFIIG" gene <130243..>132340 /locus_tag="CRE_22570" /db_xref="WormBase:WBGene00053829" mRNA join(<130243..130355,130727..131036,131607..131884, 132085..>132340) /locus_tag="CRE_22570" /product="hypothetical protein" /db_xref="WormBase:CRE22570" /db_xref="WormBase:WBGene00053829" CDS join(130243..130355,130727..131036,131607..131884, 132085..132340) /locus_tag="CRE_22570" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84533.1" /db_xref="WormBase:CRE22570" /db_xref="WormBase:WBGene00053829" /translation="MCFWNIDTSIPKHKPFLIMKLPLVPFKLVTEFMDSNEIYYGEDN TFLMIEHCSSNTVLDLFKCISAVFSCPSVRWNFYLDELRTETMMHCLNLSLLEKCTGF SFMKGSLSTSLLTELMDKIPVSKRLEIGSDIPIDFKHPNALKYYVTKYNNGRWITMND LKSIRNVGWIELKSTIFGCNDVNEFLRYWVNCEEDMLKLLDLNLKEGAFIDVDALTDQ LITVRVEGASSPHFFIKAKNHKHRKFVLGHLEIDNDNLVRFSAWEAVADIHLLEILEL LERKKELEEKISMIEKRENQSGISNFSQEIRKKRMHMQNYDF" gap 133204..133220 /estimated_length=17 gap 134824..134833 /estimated_length=10 gap 136207..136216 /estimated_length=10 gene <137361..>140299 /locus_tag="CRE_22571" /db_xref="WormBase:WBGene00062280" mRNA join(<137361..137424,138355..138527,140126..>140299) /locus_tag="CRE_22571" /product="hypothetical protein" /db_xref="WormBase:CRE22571" /db_xref="WormBase:WBGene00062280" CDS join(137361..137424,138355..138527,140126..140299) /locus_tag="CRE_22571" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84555.1" /db_xref="WormBase:CRE22571" /db_xref="WormBase:WBGene00062280" /translation="MWPTITIVTIFVVAVDSGSVGLCRTECIEQNARKIVRVHLKDDL VMAGLCNNKTDASEGSIVTPYVCHKNVGLWTLDELDEEGVVSFDKLCPTPEQYPYELR STCPRINENRDETPMALDVDEYPASSGDTPLSLA" gene complement(<140669..>144561) /locus_tag="CRE_22591" /db_xref="WormBase:WBGene00062281" mRNA complement(join(<140669..140759,142651..142776, 142825..143015,143852..144378,144558..>144561)) /locus_tag="CRE_22591" /product="hypothetical protein" /db_xref="WormBase:CRE22591" /db_xref="WormBase:WBGene00062281" CDS complement(join(140669..140759,142651..142776, 142825..143015,143852..144378,144558..144561)) /locus_tag="CRE_22591" /note="contains similarity to Brugia malayi Protein C21B10.09 in chromosome II, putative.; TR:A8Q9G4" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84551.1" /db_xref="WormBase:CRE22591" /db_xref="WormBase:WBGene00062281" /translation="MGYVFFWGWVFIITTTLVLILKREVDKSVPSTQNVPPGEEEEEM ELGVAESYTVLYKIMKLKPVLWMCAILLTGKLAFAASDGMTSLKLIDMGIPKDRLASI GVFLTPMQILLPWMIGKWTAGPRPLNIFLLAFPYRIFIGGVFAALVWWTPHFRLADGK FEYSVYFVWITGYIFHQLATYSMFVSMMAFIAQISDPRIGGTYMTMLNTLNNLGGNWP VTVVLSVTDWFTYKDCVVKGTKDVLYSCNTKLLADQCSNGGDVCEVAIDGYFISVAVC SFIGIVWYKIFYNKIKYLQKIPRSQWRVFPSRSTPN" gene <145566..>146674 /locus_tag="CRE_22572" /db_xref="WormBase:WBGene00062282" mRNA join(<145566..146046,146105..146195,146509..>146674) /locus_tag="CRE_22572" /product="hypothetical protein" /db_xref="WormBase:CRE22572" /db_xref="WormBase:WBGene00062282" CDS join(145566..146046,146105..146195,146509..146674) /locus_tag="CRE_22572" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84557.1" /db_xref="WormBase:CRE22572" /db_xref="WormBase:WBGene00062282" /translation="MNIRLQLLIPKRHLHLSNREIPSLPRIRITFSLFRCIFLFIFAL SRSSRSKIEINSLLCLWTLRVFSRRGLCIAYKTRKKGKKLSFFLLFSKREKKSEFVRL RPFRFLCFSSLKKTKKEKGKPISFHISIFRRQMNIGMPTRLVALFLLVAVISTAVAMR AKRENCKSEKLRELVLETVGIYPHQYSYQAKYLKQQAEERFGFWWSAVIVSERGGYGM SAVYDQYKNTSCEMLLFDTYYWIGRTC" gene complement(<146817..>151663) /locus_tag="CRE_22592" /db_xref="WormBase:WBGene00078446" mRNA complement(join(<146817..146869,147867..148027, 149886..150143,150988..151190,151460..>151663)) /locus_tag="CRE_22592" /product="hypothetical protein" /db_xref="WormBase:CRE22592" /db_xref="WormBase:WBGene00078446" CDS complement(join(146817..146869,147867..148027, 149886..150143,150988..151190,151460..151663)) /locus_tag="CRE_22592" /note="contains similarity to Brugia malayi Protein C21B10.09 in chromosome II, putative.; TR:A8Q9G4; coded for by the following C. remanei cDNAs: DT934092" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84528.1" /db_xref="WormBase:CRE22592" /db_xref="WormBase:WBGene00078446" /translation="MTERVRSRHKTRVPHTSEDVMAFEPDVDFSTAGGHFPRVYLPQE ERKYSDGEEEYDDDDDYQHLLPDPNVDPNSNWLKRTHDTLKGDISSILLLLFLYLLQG VPLGLIGAIPLLLSSKHVSYGSQAIFSFAYWPFSLKLLWAPIVDSVWSKRLGRRKSWM VPCQYLIGLFMLFLSFKVNDIMGGNDGSPNVIFLMLIFLPLNFLAATQDIAVDGWALT MLSKKNVGYASTCNAVGQTAGYFLGNIVFLALESSTFCNDFLRSKENHSDTGIVDLAV YWTSGHTDTQIHLEDI" gap 161938..161947 /estimated_length=10 gene complement(<164057..>169020) /locus_tag="CRE_22593" /db_xref="WormBase:WBGene00062283" mRNA complement(join(<164057..164151,164206..164643, 165008..165086,165327..166321,167578..167707, 168783..168901,168960..>169020)) /locus_tag="CRE_22593" /product="hypothetical protein" /db_xref="WormBase:CRE22593" /db_xref="WormBase:WBGene00062283" CDS complement(join(164057..164151,164206..164643, 165008..165086,165327..166321,167578..167707, 168783..168901,168960..169020)) /locus_tag="CRE_22593" /note="contains similarity to Pfam domain PF00024 PAN domain; contains similarity to Interpro domains IPR003609 (Apple-like), IPR003014 (N/apple PAN); coded for by the following C. remanei cDNAs: DR777980" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84536.1" /db_xref="InterPro:IPR003014" /db_xref="InterPro:IPR003609" /db_xref="PFAM:PF00024" /db_xref="WormBase:CRE22593" /db_xref="WormBase:WBGene00062283" /translation="MRTILLLAISLTATCLADSSVLRPCFERYSNHRLVNLRPYHSEW RMRTEDMCLVFCAQSASRCRSVVYDTVQHICHYFSDEGVDQAILSAKMTYLRVVSQSC LQENSEAAADPNMTPPDAPPVLLPSSAFPQSNDIQQELAIPQPPMEEETTTQEVVTFE PATSPSTTPEVVVTEAPVSNDEDVLVSASMPEEVTVAPESQNPDDVKIDEADLDAELK SVMEPSQFTGSFSDSETQIDNNGVYRDKTSSERRWMDSMEKMDSKPSGKKTINEKLED LKTEDKEKYEKLMGEPSEQEKEIQELKNNLRYGAKVIKFDEEAAFRKQSELRRKPVGA TRRPALKMVTISSTSYIQKAKSFLDDLNEEEETNGNEIITTGKPDQNLIFLQVRFFPE CQSDDTDVWIAFENSEQADESEDADVDSNVASRKDCQRICREKFGDVGGGDRGDDASE GQTGDLEMFYVELPLVHLLRKNAYLSPEFQIRWSLLRAPSSGDFTASTSTKFCYPRTF SVFDGCSNFVAFRDYSVRIEAVEEFDGLPRGYEGMQLCVELCVLSTRYTCRSATFNPI TGKCRLLTEDSLSSPDDFKYDEFQKDLYFENGCTNAGNDHNDSTDRNVEVVAIKPKKL KKRVRKVKKLRRRH" gene <171213..>171484 /locus_tag="CRE_22573" /db_xref="WormBase:WBGene00078447" mRNA join(<171213..171365,171416..>171484) /locus_tag="CRE_22573" /product="hypothetical protein" /db_xref="WormBase:CRE22573" /db_xref="WormBase:WBGene00078447" CDS join(171213..171365,171416..171484) /locus_tag="CRE_22573" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84531.1" /db_xref="WormBase:CRE22573" /db_xref="WormBase:WBGene00078447" /translation="MKSVILVLFCILLLNRSVFATYDLSDGELPLERFQIVHSGNGNG VKNSETKTDHHIPDSANFPPRNYYHYRSK" gene <173481..>181252 /locus_tag="CRE_22574" /db_xref="WormBase:WBGene00062284" mRNA join(<173481..173601,179332..179387,179435..179560, 179604..179858,179911..180063,180511..180819, 181106..>181252) /locus_tag="CRE_22574" /product="hypothetical protein" /db_xref="WormBase:CRE22574" /db_xref="WormBase:WBGene00062284" CDS join(173481..173601,179332..179387,179435..179560, 179604..179858,179911..180063,180511..180819, 181106..181252) /locus_tag="CRE_22574" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84564.1" /db_xref="WormBase:CRE22574" /db_xref="WormBase:WBGene00062284" /translation="MSLVTTRGGLIFLLLLATLATPAKVKVVDEDTIIYDDYTPGMGN TASAKQVADQVAYGIIACVTVGVLLVMLYMCIFGQRCRATAIRWHVLNCSVWGILHLI SYCSFADKAPWPNYITNQDWRDTAKQVECFTRSVFPAGMVFVYLEQIILTIAPKLANS LIFNAIFFLLLIPFLNGLMIFLYFAHYMDVVWWYEPIDLFNLATYLIFVTFTFIYFIF CLFGTCLCCATMTSKRPSSRTTGTFADMWLLFPYGLIPSIMYGPSFGMTSVSFALKHL LTWVMESGLLTGGGGNSSGDSMIDMNLLMQVATNAILAMPWFVLLFPLVQSILALVCV RMFREQFFFMITCGRFFEGKHHKIGMTKDEWNVTSIGPPPLYPNSLSSSEKQEA" gene <183162..>184104 /locus_tag="CRE_22575" /db_xref="WormBase:WBGene00062285" mRNA join(<183162..183217,183277..183540,184023..>184104) /locus_tag="CRE_22575" /product="hypothetical protein" /db_xref="WormBase:CRE22575" /db_xref="WormBase:WBGene00062285" CDS join(183162..183217,183277..183540,184023..184104) /locus_tag="CRE_22575" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84550.1" /db_xref="WormBase:CRE22575" /db_xref="WormBase:WBGene00062285" /translation="MAPPDLDEEALLDENPDENDPLLVLNGQRQDPPENHLDEREGEE RIERWQMVEMMADGVEIQEEGGDVRELEDDDVRHEEEEEEDIDWVTPLTRKYSKPFSK CRRCGIELFLNKKMKQVFIRKVWLALPLILE" gene <186798..>191097 /locus_tag="CRE_22576" /db_xref="WormBase:WBGene00062286" mRNA join(<186798..186803,187249..187297,187617..187719, 188534..188768,188804..189050,189105..189357, 189407..189521,190566..190626,190673..190832, 190977..>191097) /locus_tag="CRE_22576" /product="hypothetical protein" /db_xref="WormBase:CRE22576" /db_xref="WormBase:WBGene00062286" CDS join(186798..186803,187249..187297,187617..187719, 188534..188768,188804..189050,189105..189357, 189407..189521,190566..190626,190673..190832, 190977..191097) /locus_tag="CRE_22576" /note="contains similarity to Pfam domains PF00651 (BTB/POZ domain), PF07707 (BTB And C-terminal Kelch); contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ), IPR011705 (BTB/Kelch-associated), IPR013089 (Kelch related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84562.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR011705" /db_xref="InterPro:IPR013069" /db_xref="InterPro:IPR013089" /db_xref="PFAM:PF00651" /db_xref="PFAM:PF07707" /db_xref="WormBase:CRE22576" /db_xref="WormBase:WBGene00062286" /translation="MTYKDIPNRLPVRDDEPAGTDWFGDDRESLSDLAKFYNSAQFSD VNLKVGEESYPAHRLILSKSSDVFDRMLSQRWNGDKVDLELVEDSMCQTAFSSFLRFL YCNHVVLHRDNCLPLLVLADKYNVTTLKKYIQVCLDFAQSEILPVIDLKEIFSVWFSY ATKAYHPSLIKSCMEAISLDFETLLSDEWEKDWQELHRDQMVEILKCNELQLSNEFKL WESLLKWIQAPNHSERRGNTAGPLMALLLPLIRFPYMTADELSQVEKSSVSEMNPKLF QPPLLLAYKFQALPLSSRMNAKDFSKKQFLLRKYRDIRWDRRINVSKSLLSLPCVDHA FTFDTRSSTYPNSEWKWTLKLTGLSVPNPVKKDVLRILLIAEAMDQPRSIEYLLQIVD DKKVLFSTSGKKSFTKTRYYSELDMEKKIEFDELLNDESLYSCNREFIFQVLLRPID" gene <191575..>192848 /gene="Cre-col-78" /locus_tag="CRE_22577" /db_xref="WormBase:WBGene00062287" mRNA join(<191575..191586,192034..192184,192266..192469, 192526..>192848) /gene="Cre-col-78" /locus_tag="CRE_22577" /product="CRE-COL-78 protein" /db_xref="WormBase:WBGene00062287" CDS join(191575..191586,192034..192184,192266..192469, 192526..192848) /gene="Cre-col-78" /locus_tag="CRE_22577" /note="contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies); contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-COL-78 protein" /protein_id="EFO84545.1" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR008161" /db_xref="PFAM:PF01391" /db_xref="WormBase:CRE22577" /db_xref="WormBase:WBGene00062287" /translation="MSDLDEFQSGYSYNDPVLYRPSPPPPSPPEPPKCCKCSQGPVGP KGDKGADGKHGSDGFPGKPGHPGNDALERMITEGYVDFCFECPPGAPGVPGETGVKGT PGPLGPPGNQGKKGKGLPGPVGPPGTPGKHGAIGAPGPDGKPGQVYVMEGPPGLPGIS GPVGKPGPPGPPGPTGADGKVGIPGPRGEPGAVGENGQPGKEGPQGVYGPKGVDGTCE HCLPARTPPGY" gene complement(<193683..>196329) /locus_tag="CRE_22594" /db_xref="WormBase:WBGene00075636" mRNA complement(join(<193683..194087,194494..195341, 196068..>196329)) /locus_tag="CRE_22594" /product="hypothetical protein" /db_xref="WormBase:CRE22594" /db_xref="WormBase:WBGene00075636" CDS complement(join(193683..194087,194494..195341, 196068..196329)) /locus_tag="CRE_22594" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84540.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE22594" /db_xref="WormBase:WBGene00075636" /translation="MFCQPSTSTATPTWIRCPQKEAIVLRRRSEGQSTPRAPARSANE SQLSTKRERATPKVATAPKVVKTSTRKSVFNKKRSTDGFITFGGQKPLSSSPLYDPSK GISFFEQSFGIEGVLGRGSFGEVVAARCRLDGHVYAVKRTVQKSSTALKHQEALSLLR IPSHQNVLEFYQAWEEEEHVYIQTEVCHQTLLNWSTCVGGLAERDTWNVLVDLMQAVD HLHRINMIHNDIKPENVLLTRAGVCKLGDFGLAMEVRPNENHLEEGDNRYMAPEILTM GASKATDIFSLGATILETLTDLEMPTGGEAWHDVRDGLIPERMFKGASTDLRELMDAM MAKDPEERATIEMLLEHPGIQKRLEERNRYVKEMELNPQLAEPIYLTLPLLAESPENQ KATDAKEDDVTPPLNFNRRLTLSTSPRRSPTGGPKKLDFGILDDDDSPKENIPSRLNF DDEDSDSDEEEIQPTRRPCKRRCESVEGTPNKRPPPRRRPNTFSTPLRQPCFDD" gene <201410..>201784 /locus_tag="CRE_22578" /db_xref="WormBase:WBGene00062288" mRNA <201410..>201784 /locus_tag="CRE_22578" /product="hypothetical protein" /db_xref="WormBase:CRE22578" /db_xref="WormBase:WBGene00062288" CDS 201410..201784 /locus_tag="CRE_22578" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84558.1" /db_xref="WormBase:CRE22578" /db_xref="WormBase:WBGene00062288" /translation="MFFLSWSIALLFSAFPPHLISLDFWNPPSEYTLEKLSSVATSLS LPTRNVLNSSQCTPLDTVDSNPNYSYFTNSLLAHLTSPSLTPMSDSQTLPEDPCLLSI YLLYLITFSLLLFRFGMPLPTM" gap 207408..207488 /estimated_length=81 gene <210944..>214307 /gene="Cre-rhy-1" /locus_tag="CRE_22579" /db_xref="WormBase:WBGene00062290" mRNA join(<210944..211120,211671..212543,212597..212802, 214058..>214307) /gene="Cre-rhy-1" /locus_tag="CRE_22579" /product="CRE-RHY-1 protein" /db_xref="WormBase:WBGene00062290" CDS join(210944..211120,211671..212543,212597..212802, 214058..214307) /gene="Cre-rhy-1" /locus_tag="CRE_22579" /note="contains similarity to Pfam domain PF01757 Acyltransferase family; contains similarity to Interpro domain IPR002656 (Acyltransferase 3)" /codon_start=1 /product="CRE-RHY-1 protein" /protein_id="EFO84538.1" /db_xref="InterPro:IPR002656" /db_xref="PFAM:PF01757" /db_xref="WormBase:CRE22579" /db_xref="WormBase:WBGene00062290" /translation="MSSSLPPATLLIMERISSEVRMYSTSPMSSNNVTSCLTAAFTPD TVRAAVSPLLAWITLVIIGTLAPISVFSGLSLKRSTKELLSERSSKLDVLDIFRFIAI LWVMLNHTGSEGRIDILERLPSADAFKSAMHDHPVFGALMGNSALGVEIFLVLSGMLA ARSWLRKADEPFLQHWKSFITRRLLRLAPSMFIFVYIAAGPIMQALLPRYSSSMVSAC GFWGILSHVTFTSNWQSTPTCMGYLWYLGLDMQLYMVAPIFLNLLHKSPKRGMALTAA TIIASMFIRAGYCTAYGTCNKSDVDIPFISYPGQDAETLKSIYAGLWDMYSRPYTKCG PFLIGLLLGYITTSSQYIMPATTSKYLFRSSLSVAIITIYAILPEYWNPDAGNTVYNT IYTAVFRSVFALAIAGMIAALYFRQEYRPTHPIFAMLAKLTYNAYLLHMPVVYIFNWL PFLQTATSPIHLLLVLPFVATLSFIAALIFYLFIEAPIGHLTSQYATRLGL" gap 212956..213745 /estimated_length=790 gene complement(<214536..>216185) /locus_tag="CRE_22595" /db_xref="WormBase:WBGene00072167" mRNA complement(join(<214536..214687,214738..214832, 215983..>216185)) /locus_tag="CRE_22595" /product="hypothetical protein" /db_xref="WormBase:CRE22595" /db_xref="WormBase:WBGene00072167" CDS complement(join(214536..214687,214738..214832, 215983..216185)) /locus_tag="CRE_22595" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84535.1" /db_xref="WormBase:CRE22595" /db_xref="WormBase:WBGene00072167" /translation="MVGNVYIGANVRQRAQLGENYLEGTDVIAVNGHKQIGLVAQILK DHGANVTEFRYDLRHLEEISRRIRQADILLDGVQQGGEIEEASASNSRLIVAECDCED PFSSMSAVARISMALAARERSGHGQRLIASDCLDYWRSLNRYGRPMK" gene complement(<216667..>223450) /locus_tag="CRE_22596" /db_xref="WormBase:WBGene00072168" mRNA complement(join(<216667..216783,221474..221966, 222868..223170,223368..>223450)) /locus_tag="CRE_22596" /product="hypothetical protein" /db_xref="WormBase:CRE22596" /db_xref="WormBase:WBGene00072168" CDS complement(join(216667..216783,221474..221966, 222868..223170,223368..223450)) /locus_tag="CRE_22596" /note="contains similarity to Pfam domain PF01585 G-patch domain; contains similarity to Interpro domain IPR000467 (D111/G-patch); coded for by the following C. remanei cDNAs: DR782647, DT934808" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84534.1" /db_xref="InterPro:IPR000467" /db_xref="PFAM:PF01585" /db_xref="WormBase:CRE22596" /db_xref="WormBase:WBGene00072168" /translation="MSILAEPRRKQKISVDPQNLTWKNDDQKFSKKLMEKMGWSEGDG LGRNRQGNSDAVKLKANHSGRGLGADKLADYDSTWISHHDDFADLLIALNKNKEKEPE QTEEEKQQAAEKISIELKSKSIRRRIHYQKFTRAKDTTNYSDSHKKGILGYGRLKSDN APEEEKTKTEEKSSDSEKSDSDDKKEGNNTVSTLSVGDYFAAKMAALKAKREAAATEI KTEIVEVKEEIVEEEEEESDEEKAKKKAEKKERKRLRREQREKEEKIEVKEEIKEEIK EELDEETERKRLKKVGNEKKRLKRLHEEQQQAAENGEIDEDEVPKKRKKHTEDEH" gap 218439..218448 /estimated_length=10 gap 220205..220214 /estimated_length=10 gene complement(<223837..>225760) /locus_tag="CRE_22597" /db_xref="WormBase:WBGene00072169" mRNA complement(join(<223837..224242,224857..224976, 225023..225307,225432..225520,225572..225676, 225734..>225760)) /locus_tag="CRE_22597" /product="hypothetical protein" /db_xref="WormBase:CRE22597" /db_xref="WormBase:WBGene00072169" CDS complement(join(223837..224242,224857..224976, 225023..225307,225432..225520,225572..225676, 225734..225760)) /locus_tag="CRE_22597" /note="contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase; contains similarity to Interpro domain IPR004843 (Metallophosphoesterase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84559.1" /db_xref="InterPro:IPR004843" /db_xref="PFAM:PF00149" /db_xref="WormBase:CRE22597" /db_xref="WormBase:WBGene00072169" /translation="MYYAPAFLQWLLFDLTSISAGIWTNMIAFVCGFGLVNFFAGKMK MFQYTSWILDLIGKIPYFYDLMWKRRSQIKFTLVMTLLTSVTMFISRDWIVVKHKTIK IPNFTADGGHLRVAVISDLHAGASVYTTQIHQVVEKVLENQVDAVLIVGDMVDAPVAD IEDRVRPVLQLPVHAPTYFVTGNHEYYYGDVHEWLRFYRNGHITVLENESAMLRGVCL AGVNDISSPKSGILNHEMDLPKAVQRCPKNTSQIVMSHNPASIREFQVDHPKELSKID LILSGHTHAGQFYVVIPVVYWLLPYFYGLYEIPFGGQLMVTAGSLYQGPPMKMIGMSE VWVLDLIGE" gene <226365..>229022 /gene="Cre-dpl-1" /locus_tag="CRE_22580" /db_xref="WormBase:WBGene00072170" mRNA join(<226365..226373,226486..226839,226889..227154, 227216..227284,227329..227588,227641..227826, 228059..228264,228358..228501,228584..228833, 228925..>229022) /gene="Cre-dpl-1" /locus_tag="CRE_22580" /product="CRE-DPL-1 protein" /db_xref="WormBase:WBGene00072170" CDS join(226365..226373,226486..226839,226889..227154, 227216..227284,227329..227588,227641..227826, 228059..228264,228358..228501,228584..228833, 228925..229022) /gene="Cre-dpl-1" /locus_tag="CRE_22580" /note="contains similarity to Pfam domains PF08781 (Transcription factor DP), PF02319 (E2F/DP family winged-helix DNA-binding domain); contains similarity to Interpro domains IPR014889 (Transcription factor DP, C-terminal), IPR011991 (Winged helix repressor DNA-binding), IPR003316 (Transcription factor E2F/dimerisation partner (TDP)), IPR015648 (Transcription factor DP)" /codon_start=1 /product="CRE-DPL-1 protein" /protein_id="EFO84553.1" /db_xref="InterPro:IPR003316" /db_xref="InterPro:IPR011991" /db_xref="InterPro:IPR014889" /db_xref="InterPro:IPR015648" /db_xref="PFAM:PF02319" /db_xref="PFAM:PF08781" /db_xref="WormBase:CRE22580" /db_xref="WormBase:WBGene00072170" /translation="MNPTYDQRHMQLSQNRPQTSGSTKRYVQMPTGMPRQPLYPADDH FNDTQSAWDEPSSNVGGGGGGGVVSSQQNDKPTGLRHFSTKVCEKVKEKGLTNYNEVA DELVSDYFQNNLMKQIDVVKQEYDMKNIRRRVYDALNVLLAMNIITKNKKDIRWIGLP ASASQEISRLEEEKARREASIKSKRETLKEMILQIVSYKNLVAKNREAQRKNGEPNAD TILHLPFLMIHTHKDTNVECSVSADKSEFLFSFDRKFKIHDDFEVLKSEVSYFCNDFL TILISELNLTCSLNTSNPTDEEVKIAKSYLPSLHQNYVDEIISNNKKQEIEREENKKR LLAQQHSQLQLQYYEQDDSEMSQVPNAGRYNRQLQEHLMNDGSEDRSAADGIMEREDE MEKSVHQGNTAIRVGPLYSNYSPQKLLRQQANSSNTPLQAPQPTRRYYVQKNPTPQMR REMSPAIRTVARPYPAGGARMAAGGSVTGGVKYYVPGASTSLHPAPRYGQPSSSSTQQ RVVYSSGSGIPTQLAPGQRIVTQRIVTPGGPHPPGTIVRKVIRKIVVNSGTNQAGGLK QSAAQQVIQKKMMEQEMIERKPEQPMTSAQAAALIQHPPPAEYDYFE" gene complement(<229174..>230113) /locus_tag="CRE_22598" /db_xref="WormBase:WBGene00078448" mRNA complement(join(<229174..229206,229346..229513, 230039..>230113)) /locus_tag="CRE_22598" /product="hypothetical protein" /db_xref="WormBase:CRE22598" /db_xref="WormBase:WBGene00078448" CDS complement(join(229174..229206,229346..229513, 230039..230113)) /locus_tag="CRE_22598" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84552.1" /db_xref="WormBase:CRE22598" /db_xref="WormBase:WBGene00078448" /translation="MSVERFLVFGSVIAWVLLTYCSRFWIEAVDGYLIGNRRRVIAMW RIECILTLLNVFAYGQLMKWFDDDIVKEKVQDRRKMQLEEWEICTNN" gene complement(<230372..>239193) /gene="Cre-sec-5" /locus_tag="CRE_22599" /db_xref="WormBase:WBGene00072171" mRNA complement(join(<230372..230486,232067..232361, 232560..232683,232726..233052,234253..234350, 234400..234694,235878..236591,237214..237409, 237481..237629,238273..238492,238974..239079, 239127..>239193)) /gene="Cre-sec-5" /locus_tag="CRE_22599" /product="CRE-SEC-5 protein" /db_xref="WormBase:WBGene00072171" CDS complement(join(230372..230486,232067..232361, 232560..232683,232726..233052,234253..234350, 234400..234694,235878..236591,237214..237409, 237481..237629,238273..238492,238974..239079, 239127..239193)) /gene="Cre-sec-5" /locus_tag="CRE_22599" /note="contains similarity to Pfam domain PF01833 IPT/TIG domain; contains similarity to Interpro domains IPR002909 (Cell surface receptor IPT/TIG), IPR013783 (Immunoglobulin-like fold); coded for by the following C. remanei cDNAs: DT935044" /codon_start=1 /product="CRE-SEC-5 protein" /protein_id="EFO84546.1" /db_xref="InterPro:IPR002909" /db_xref="InterPro:IPR013783" /db_xref="PFAM:PF01833" /db_xref="WormBase:CRE22599" /db_xref="WormBase:WBGene00072171" /translation="MEENSNFSERLPPTVTGLSPTEGVPGTQITIRGENLGCDQNDVI MLFICGIDSLWSMKWKSPSKIIARVGAASRGPGEVRIVTKSGGKGTSNVKFRVFITQI GPLEESAVWVDETRTVPGREAIRSVPQIQDERDALGLVPSQKRMDQIVLSRDFPDCSG NLRMENFSPQWYLLENHADATIEDLRTAIKNMELAKQNDAKRSEEMHKANLYSLINCV DTLANLHQALEKGENADHFAALGNISKLIKDSKTKAESVFADVLKRKDDADATRNALG VIVRFKFIFFLSSKIEESMKKGEYITILNDYTRAKSLYSDTDVPLFRECKSRRDLENL EKRVFFPVMTEIDAKMEVFKEEMKRKLIDTPVSYEEQSKLIKYLKILDPESDPTWDCI TSYYVWLEKSLWDMQEKFLKKAIDEEEEDKMRYSSNTQNQHMILTKTNEIQNFVTTLV ELLLSKLPSFWKLANTYHSSSASPDAIQRLEDINTMLTTLINVSSWLVLNALITKALP DSVLNQYGNQFAKWPAVSADIGRSNLQQSLKTTRSLIASLLENQFSLTHVQPLIELCM TVRLKLVSDFVDSGIERVALLAHRINWKQDILDRAQQTKTILPDYYENEICECLTRTR DALSTTGYPGEACLFSRELFRETIIDLFFRLITSIKICFDRLFIRQRPQQLETQKKGN EITTKKLLIAVGDIEFIIAKTLNNVGKKMQECGVKHVDQIQEKSRAKLSSFRTKMIND CIAMMSSAFQPLIASATYEYMPDDDDISDYAKEMILCSVLQQAELELYAPQLAIECLQ QTVSTALEDLLTHFSRLNQDTSPLIVTQIVIDLTGLEEALSTYATLAIRVQINTYRAG LVGRFDNHRLQQCLKNMRTTMRMALQSLEQHADSLDDDANNTSNI" gene <239439..>241251 /gene="Cre-pir-1" /locus_tag="CRE_22581" /db_xref="WormBase:WBGene00072172" mRNA join(<239439..239512,239997..240239,240291..240388, 240438..240548,241088..>241251) /gene="Cre-pir-1" /locus_tag="CRE_22581" /product="CRE-PIR-1 protein" /db_xref="WormBase:WBGene00072172" CDS join(239439..239512,239997..240239,240291..240388, 240438..240548,241088..241251) /gene="Cre-pir-1" /locus_tag="CRE_22581" /note="contains similarity to Pfam domain PF00782 Dual specificity phosphatase, catalytic domain; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000387 (Protein-tyrosine phosphatase), IPR000340 (Protein-tyrosine phosphatase, dual specificity); coded for by the following C. remanei cDNAs: DR407053, DT934537" /codon_start=1 /product="CRE-PIR-1 protein" /protein_id="EFO84544.1" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR016130" /db_xref="PFAM:PF00782" /db_xref="WormBase:CRE22581" /db_xref="WormBase:WBGene00072172" /translation="MSNNHYNYYRPRPHDRLPGKRFPDRWNIYDNVGRDIEGTRFVPF KTPLDSSFFDGKNMPEELQFGVKSLMNMAKQANKQIGLVVDLTNTDRYYKKTEWADHG VKYLKLNCPGHEVNEREDLVQDFIKAVKEFVEDPENEGKLVGVHCTHGLNRTGYLICR YMIDVDGYTAADAISMFEYYRGHPMEREHYKVSLYEAEVRKRTAKPSGEIQEKNEKEA PRKESGDVVSN" gene complement(<241836..>242378) /locus_tag="CRE_22600" /db_xref="WormBase:WBGene00078449" mRNA complement(<241836..>242378) /locus_tag="CRE_22600" /product="hypothetical protein" /db_xref="WormBase:CRE22600" /db_xref="WormBase:WBGene00078449" CDS complement(241836..242378) /locus_tag="CRE_22600" /note="contains similarity to Homo sapiens Putative protein TPRXL; ENSEMBL:ENSP00000322097" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84565.1" /db_xref="WormBase:CRE22600" /db_xref="WormBase:WBGene00078449" /translation="MFKQLLAEKTSLTPSDDEDIAVPNANPIASPGTGYGSSVPSQNF RTPSGTGYGSSFPSQNFRTPSGTGYGSSFPSQNFRTPSGTGYGSSFPSQNFRTPSGTG YGSSFPSQNYSAPSGSGSKIPKRKSKPKKNQAKRRDESGAFLSTGVTAEETICRDCGT KITNTRSQARHLTVCPATKP" gene <243976..>245991 /locus_tag="CRE_22582" /db_xref="WormBase:WBGene00072173" mRNA join(<243976..243995,244568..244700,244747..245441, 245841..>245991) /locus_tag="CRE_22582" /product="hypothetical protein" /db_xref="WormBase:CRE22582" /db_xref="WormBase:WBGene00072173" CDS join(243976..243995,244568..244700,244747..245441, 245841..245991) /locus_tag="CRE_22582" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84561.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE22582" /db_xref="WormBase:WBGene00072173" /translation="MRLTIIKINISLCSQKSKSVAVSYRGPSKNVQLELYFGMGDSLE HYIEKNQYTLFEKYYLLRVEEMSKLPESHKLNTVIIGGFQNVPVEMGDKCLNTYWNDR VVGMTAIGDYGREIFNRDIHSLLLGNENEQNDHKRAVDWVMDTQQSIADLYCEFKPKT DRDLDYILENCKYIEDLTLFVKPTDAYCPAKMPNFSLNYLYISPSFWINSQHLLLMNC KTILLQDSKLTHRELNSFLKHWMNGGCFQLKDLKVFVEETLNYETALDGLSFTRREDE VDKEYVNHENSNYVIKNGFNIKRPIDDVTATIRDDGPDSERFSMLVWPDFSGNSYE" gene complement(<249040..>250792) /locus_tag="CRE_22601" /db_xref="WormBase:WBGene00072174" mRNA complement(join(<249040..249196,249282..249591, 249705..249862,250431..250658,250707..>250792)) /locus_tag="CRE_22601" /product="hypothetical protein" /db_xref="WormBase:CRE22601" /db_xref="WormBase:WBGene00072174" CDS complement(join(249040..249196,249282..249591, 249705..249862,250431..250658,250707..250792)) /locus_tag="CRE_22601" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84548.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE22601" /db_xref="WormBase:WBGene00072174" /translation="MTKFTGFPILKLPILCFEKILGQCEPFDQINISFLSKKCAWLLK SLRNKQLMCFDIELKNDYTKLAFILEANEIYGSWMFNFGEPRDWDWRFIQVTKDDMFI DNVKRLKYWPFLSVDPQQTLNSSVSYLTNLFDINVRNVLIAPDDFPETRTSIFPGFDC HFYCDPINFKKGEILFGNTSTGWITRDILFKFKNSRIQLYGCNTRNLNANDFDRFVDR WYRSDDTEFELLMINWKQYPGSLNISKFKPFAWNENRRSQNFRLLNTVALDCSQGYDI LRHDGALATILTNRVNSLVFYVWNVRFPDTTGLEVQ" gap 253642..253651 /estimated_length=10 gap 255199..255208 /estimated_length=10 gap 256348..256357 /estimated_length=10 gap 258333..258342 /estimated_length=10 gap 259594..259596 /estimated_length=3 gene <261328..>261881 /locus_tag="CRE_22583" /db_xref="WormBase:WBGene00070519" mRNA join(<261328..261453,261501..>261881) /locus_tag="CRE_22583" /product="hypothetical protein" /db_xref="WormBase:CRE22583" /db_xref="WormBase:WBGene00070519" CDS join(261328..261453,261501..261881) /locus_tag="CRE_22583" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84529.1" /db_xref="WormBase:CRE22583" /db_xref="WormBase:WBGene00070519" /translation="MAKRALLVISHDKVQIDDLTLPSADESSSNQVDVKNNLPSQKPE SKNIVRVLRKTCDEPKGKFQGAIATVRLLLELPPALILLDSEKFGECAIKLMKTHNPF KSDRSIVSIAIEGDDNISNVSTQFKPIGNIKPVDVARCIEDADHEIDLGLRQKTVIFT YLNPPGSN" gene <262918..>267676 /locus_tag="CRE_22584" /db_xref="WormBase:WBGene00072175" mRNA join(<262918..262956,263002..263551,263598..263767, 263813..264218,264261..264478,264525..264790, 264836..265021,265066..265573,265618..265692, 265741..265950,265996..266099,266142..266350, 266397..266527,266574..266666,266714..266872, 266918..267191,267237..>267676) /locus_tag="CRE_22584" /product="hypothetical protein" /db_xref="WormBase:CRE22584" /db_xref="WormBase:WBGene00072175" CDS join(262918..262956,263002..263551,263598..263767, 263813..264218,264261..264478,264525..264790, 264836..265021,265066..265573,265618..265692, 265741..265950,265996..266099,266142..266350, 266397..266527,266574..266666,266714..266872, 266918..267191,267237..267676) /locus_tag="CRE_22584" /note="contains similarity to Pfam domain PF03175 DNA polymerase type B, organellar and viral; contains similarity to Interpro domains IPR006172 (DNA-directed DNA polymerase, family B), IPR004868 (DNA-directed DNA polymerase, family B, mitochondria/virus)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO84549.1" /db_xref="InterPro:IPR004868" /db_xref="InterPro:IPR006172" /db_xref="PFAM:PF03175" /db_xref="WormBase:CRE22584" /db_xref="WormBase:WBGene00072175" /translation="MMDSKLHGSEEEMVQVGGANVRVLTKHAEDANGRFNGLVKTVTL SLELAPSMTSDPRGAELFADTLIELVQRNDPFKTPRTRAGFNFESSEFQESVGIPFQK INQMSVSKIVENMAKMSQSSRSPLELEDPKLNLRITYLNPPAGSGKRKFNTGDILELT AFEKKKRTEDMIDEPCCENKNMLGTKQTRSNIMPNEVLENCLVHALYQSLMYNEWKQN RTIVNLNKYRSSIRKTYKRPGICVEVYDAVNDMKERAGMTKSSDFDRLDIEQFQETVF ASTHQIVVFVENSTTPYYMGPYVGPSKQLVLYLSNGHFSGVRSICALLKTEYYCFLCN TKYNNSSSHYNCPLIHRVCGQKSCTISNEDEEVRCNKCTIKFRSRLCFENHLKNGPKN GKSRCQHTQVCKKCGEAYYTNKNKEGHKCGEKWCYRCNCKRAKNHQCIMPTSTKNEKR LTRRRVFFDIESRADEKTGQQHAVLFVALRCCPECSSSIPKALQDAWKETCKKCAPDG RLKVIECVTIKNRKVDVASELTEWLFADHHKGSVLVAHNASGYDAQFILEKMIASNKA APHLILDGTKLIFMEHNGVRLLDSMKFLTMSLSALGKAFEIDSVKGDFPVLFIKPEHY DYNGNMPEDKWYNLENKPSSVKKQIMNFLENERNANKTFNFVDEIMRYCYNDVYILAK AMNSFETEFEAMTNVCLLEVNHFPFNTKLNINIQESTTAASAAALVFRRNHLVSEKPI VLDAKPYVSINSSVISQKYLAWFGRKEGVQVNMSTTYGEQKIGEHRVDGFVSPCEKFP KGLIIEFFGCYWHAHSCTYTNSSMIGSENGQEIWDRDEKRLNSLKEKHPVKVVWECEV KRELLIDPEMAEFFDNYEPIGILHCEKSLVGGRTEVFKLYANNTAKVLRYLDVVSLYP TVMKHEAFPIGAPENVPQSTMKVPMKKPEDIKFRGFMSCRVLPPRQLKLPVLPIKYGG KLLFGLCRCCAKRLSNTSCNHSDEERAFNGTFTTVELQKALSLGYTIIEAYHGIKYNH WVQNDATGEGGLFTSYINQMMEEKIYSSGWPSNVITDAQKDAYCKAYFDKEQIRLTDY SRFVKNPGKRAVAKLMLNSLWGKFAQNVDRETTEIVIDPMEFWKLVYDTNVVITIVRC VNDVLVVKYRKQHETLQSLKTNAMQLASFTTSYARLRLYRFMELVGGENIIYTDTDSI IYSVPAGTEDPLKDEVGSYLGQLTDELNGEMTEFVSLGPKTYCYKDLLDNKEEKIVRK AKGIIMNSQVEKEVNFEKMKIMVDEAIENAEARTTLYLPQHTIRRDNSHKMYSQNIKK VFKYTFNKRRLLADGTTLPFGYCQL" CONTIG join(AAGD02008078.1:1..17746,gap(396),AAGD02008079.1:1..2335, gap(297),AAGD02008080.1:1..22667,gap(655),AAGD02008081.1:1..28974, gap(10),AAGD02008082.1:1..4028,gap(136),AAGD02008083.1:1..30745, gap(10),AAGD02008084.1:1..2179,gap(693),AAGD02008085.1:1..22332, gap(17),AAGD02008086.1:1..1603,gap(10),AAGD02008087.1:1..1373, gap(10),AAGD02008088.1:1..25721,gap(10),AAGD02008089.1:1..45460, gap(81),AAGD02008090.1:1..5467,gap(790),AAGD02008091.1:1..4693, gap(10),AAGD02008092.1:1..1756,gap(10),AAGD02008093.1:1..33427, gap(10),AAGD02008094.1:1..1547,gap(10),AAGD02008095.1:1..1139, gap(10),AAGD02008096.1:1..1975,gap(10),AAGD02008097.1:1..1251, gap(3),AAGD02008098.1:1..10078) //