LOCUS DS268458 468356 bp DNA linear CON 11-OCT-2010 DEFINITION Caenorhabditis remanei Scfld02_51 genomic scaffold, whole genome shotgun sequence. ACCESSION DS268458 AAGD02000000 VERSION DS268458.1 DBLINK BioProject: PRJNA12588 BioSample: SAMN00627085 KEYWORDS WGS. SOURCE Caenorhabditis remanei ORGANISM Caenorhabditis remanei Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 468356) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE PCAP assembly of the Caenorhabditis remanei genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 468356) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (17-JUL-2007) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA COMMENT The organism is Caenorhabditis remanei Sudhaus, 1974; strain PB4641. This strain is derived from the wild isolate EM464. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain EM464 was established with individuals collected from a pillbug (Armadillidium vulgare) in Brooklyn, New York, NY, USA in June 1990 by Scott Baird. EM464 was described as /Caenorhabditis vulgaris/Baird, Fitch & Emmons, 1994, which was later shown to be a junior synonym of C. remanei (Sudhaus & Kiontke 1996). Annotation was added to the scaffolds in October 2010. FEATURES Location/Qualifiers source 1..468356 /organism="Caenorhabditis remanei" /mol_type="genomic DNA" /strain="PB4641" /db_xref="taxon:31234" gene <2167..>5405 /locus_tag="CRE_04012" /db_xref="WormBase:WBGene00057576" mRNA join(<2167..2356,5239..>5405) /locus_tag="CRE_04012" /product="hypothetical protein" /db_xref="WormBase:CRE04012" /db_xref="WormBase:WBGene00057576" CDS join(2167..2356,5239..5405) /locus_tag="CRE_04012" /note="contains similarity to Pfam domain PF04998 RNA polymerase Rpb1, domain 5; contains similarity to Interpro domain IPR007081 (RNA polymerase Rpb1, domain 5)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05175.1" /db_xref="InterPro:IPR007081" /db_xref="PFAM:PF04998" /db_xref="WormBase:CRE04012" /db_xref="WormBase:WBGene00057576" /translation="MNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGAMSSSSSP LQKMTFETTMAFLREALLQGEEDNVNSPSARIVMGALPRGGTGSFDLLLNPKMQSERE EHEAERSRRRGAKHSY" gene <11083..>12252 /locus_tag="CRE_04013" /db_xref="WormBase:WBGene00057578" mRNA join(<11083..11380,11531..11893,11945..>12252) /locus_tag="CRE_04013" /product="hypothetical protein" /db_xref="WormBase:CRE04013" /db_xref="WormBase:WBGene00057578" CDS join(11083..11380,11531..11893,11945..12252) /locus_tag="CRE_04013" /note="contains similarity to Pfam domains PF02826 (D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain), PF00389 (D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain); contains similarity to Interpro domains IPR006140 (D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding), IPR006139 (D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DR409721, DY527781, DY525524, DY528496, DY528372, DT935928, DT934604, DY528062, DY526421" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05112.1" /db_xref="InterPro:IPR006139" /db_xref="InterPro:IPR006140" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00389" /db_xref="PFAM:PF02826" /db_xref="WormBase:CRE04013" /db_xref="WormBase:WBGene00057578" /translation="MSSPISKVLIADDIEQECVDILKQNGIEVTVKTKQTKDQLLESL PQHDAVIVRSATKITAELLAASAGKLKLVGRAGTGVDNIDVPAATANKILVMNTPQAN SRSAAELTCTLILSLSRHVPQAAASMKAGKWARKDFMGEEVYGRTLAVLGLGRIGSEV ALRLQAFGMRVIGYDPMVTKEQAAAKNIELLALDQIWPQADYITVHVPLIKQTENLIN KETLAQCKKGVRIVNVARGGIVNEQDLVDSLNAGHAKGAAFDVFEPEPPTFREFIDHP LVIATPHLGASTIDAQLRVASEIADNIVQYNKGTVLGVLNAKEVLN" gene complement(<12834..>15387) /locus_tag="CRE_04068" /db_xref="WormBase:WBGene00057579" mRNA complement(join(<12834..13354,13397..13825,14247..14750, 15048..>15387)) /locus_tag="CRE_04068" /product="hypothetical protein" /db_xref="WormBase:CRE04068" /db_xref="WormBase:WBGene00057579" CDS complement(join(12834..13354,13397..13825,14247..14750, 15048..15387)) /locus_tag="CRE_04068" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05142.1" /db_xref="InterPro:IPR003002" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE04068" /db_xref="WormBase:WBGene00057579" /translation="MPTVIQSTSCGNISYLASVNFLETGCHIGSILMLSLSTYTLFLI ITKSPVAMKSSVPYMINLHIWTMFCDFTWAVLILPMFFMPVIAAHAYGLLLYFTENRI LLVWIPFATLGGMAASIISLFEHRHRAIVTNSHFVLKHDYFRRGLLTFMYFGHINFGI PEILTAPQDQDAAKQKMKEKYPCLPPVFMERVSHVIQMDASLFNPHMYLICLYLAIIF SFFCSQIIWNLLPRNNPSMSSNTRKMMRSFFISMCIQVAIPAFVVYLPNLYWNISITF DFYSQAYLFSPFTENYIKISAVIRHCSFTLSLLMNNTPISSSLCSHNSSYIASVEFLE TGCHVGSIFMITLSSYSLFLIAKKSPTSMKSSVPYMINLHVWTMFCDSTWAVLVLPMF FMPVIAAHSSGILLLITENQSVLLWLSFASLGGMCAAVVNLFESRHHVIITNSWFVMR KEPTRYIFYSILYVLLVNFGMPEILTVPEDQETAKLDAFRKYPCIPVILFDKMSRIIQ KDASLFNPHMYLTCFSLGGLVLFYCIHIMWNLLPRNNPSMSTGTRKMLKSFFISMCIQ VAIPVIVIYLPNIYWNVSITFDFYSQGFLKL" gene <16290..>18009 /locus_tag="CRE_04014" /db_xref="WormBase:WBGene00057580" mRNA join(<16290..16488,16624..16789,16836..17009,17058..17253, 17297..17643,17688..>18009) /locus_tag="CRE_04014" /product="hypothetical protein" /db_xref="WormBase:CRE04014" /db_xref="WormBase:WBGene00057580" CDS join(16290..16488,16624..16789,16836..17009,17058..17253, 17297..17643,17688..18009) /locus_tag="CRE_04014" /note="contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05208.1" /db_xref="InterPro:IPR003006" /db_xref="InterPro:IPR011990" /db_xref="WormBase:CRE04014" /db_xref="WormBase:WBGene00057580" /translation="MAEWCADHLRNCEGWKSAGLELSTTSDENAKLLDASIRQLVSWS DCVSLGGFHDTLVRLTASDPGAIMARAFFVGLAGLGTESAARDPVFAKTMTQLESDAE KYGNQREKRHVKAAVLWGRGKHHEAADEWDSIMDEYPTDLIAVKFSHDAHFFNGNCKG KKNAIEKVINKWSHDLPCYSYLHGMYAFGLEECGLYGDAEKEADQALNLNRFDCWASH AKAHVLEMNGRHKEGKEFMYRTEDDWRQGWMIATHNYWHTALFHIEYAEYEDALGIFD REIAKRFNRTNSLLDMVDASSLLWRLELEGVDVGKERWANIEHLGKFIDNHAIVFNDV HLGVALYRQDELETEKNLRDSLEKYSSLLSEDNARISKEIGMPLYDGMLDYARCEYDV AAETMFPIRDKVIQIGGSHAQRDVFVQTLIQSCIMSKDPKNWSLTPQLLIERETMKHD SLLGQRLADKFRAKHPL" gene complement(<18099..>19764) /gene="Cre-ctl-2" /locus_tag="CRE_04069" /db_xref="WormBase:WBGene00057581" mRNA complement(join(<18099..18629,18677..18949,18997..19674, 19711..>19764)) /gene="Cre-ctl-2" /locus_tag="CRE_04069" /product="CRE-CTL-2 protein" /db_xref="WormBase:WBGene00057581" CDS complement(join(18099..18629,18677..18949,18997..19674, 19711..19764)) /gene="Cre-ctl-2" /locus_tag="CRE_04069" /note="contains similarity to Pfam domain PF00199 Catalase; contains similarity to Interpro domains IPR002226 (Catalase), IPR011614 (Catalase, N-terminal); coded for by the following C. remanei cDNAs: DQ054785" /codon_start=1 /product="CRE-CTL-2 protein" /protein_id="EFP05143.1" /db_xref="InterPro:IPR002226" /db_xref="InterPro:IPR011614" /db_xref="PFAM:PF00199" /db_xref="WormBase:CRE04069" /db_xref="WormBase:WBGene00057581" /translation="MPNDPSDNQLKNYKATYPKTFSKMRGIFQKPQVITTSNGAPIYT KTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYC KADIFNKIGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIF FIRDPIHFPNFIHTQKRNPQTHLKDVNAMFDFWLHRPEALHQVMFLFSDRGLPDGYRH MNGYGSHTFKMVNKEGKPVYCKFHFKPTQGVKNLTVEQAGRLASEDPDYSIRDLFNAI EKGDFPVWKMFIQVMTFEQAEKWEFNPFDVTKVWPHGDYPLIEVGKMVLNRNPRNYFA EVEQSAFCPAHIVPGIEFSPDKMLQGRVFSYTDTHFHRLGPNYIQLPVNCPYRSRAHN TQRDGSMAYDNQQHAPNYFPNSFNYGKTRSDVKDTVFQTVGDVDRYETGDDHNYEQPR QFWEKVLDTGARERMCQNFAGALGGCHDFIVSGMLDHFTKVHPDFGARVKAIIQSQTR SHI" gene complement(<20537..>22315) /gene="Cre-ctl-3" /locus_tag="CRE_04070" /db_xref="WormBase:WBGene00057582" mRNA complement(join(<20537..21061,21110..21382,21428..22072, 22092..22183,22285..>22315)) /gene="Cre-ctl-3" /locus_tag="CRE_04070" /product="CRE-CTL-3 protein" /db_xref="WormBase:WBGene00057582" CDS complement(join(20537..21061,21110..21382,21428..22072, 22092..22183,22285..22315)) /gene="Cre-ctl-3" /locus_tag="CRE_04070" /note="contains similarity to Pfam domain PF00199 Catalase; contains similarity to Interpro domains IPR002226 (Catalase), IPR011614 (Catalase, N-terminal); coded for by the following C. remanei cDNAs: DY528835" /codon_start=1 /product="CRE-CTL-3 protein" /protein_id="EFP05187.1" /db_xref="InterPro:IPR002226" /db_xref="InterPro:IPR011614" /db_xref="PFAM:PF00199" /db_xref="WormBase:CRE04070" /db_xref="WormBase:WBGene00057582" /translation="MPMLPHMVKLTVDDSTPGVMADDQLKQYRDSHKVSNRCVANEPH VLTTSNGAPIYTKTAVMTAGKRGPMLMQDIVYMDEMAHFDRERIPERVVHAKGGGAHG YFEVTHDITKYCKADMFSEIGKMTPLLARFSTVGGESGSADTARDPRGFAIKFYTEEG NWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPRTHLKDRNAMYDFWINRPESIHQVMFL FSDRGTPDGFRHMNGYGSHAFKMVNKEGKPIYCKFHFKPTQGVKNLSSADADRLAGEN PDYAIEDLFNAIEKKDFPEWKLFIQVMTFEQAEKWEMNPFDVTKVWPHGDYPLIEVGK MVLNRNPKNYFAEIEQSAFCPAHVVPGIEFSPDKMLQGRLFSYTDTHYHRLGPNYIQL PVNCPYRSRAHNTQRDGFMTIDSQEDAPNYFPNSFNGYRTRDDVKETSFSLVGDVDRY ETRDEHNYEQPRQFWEKVLKEDERDRLVQNFTSSLAPCYEQIQQAMIKIFSNVHPDFG NAVRHALCQKKQS" gene <27539..>32411 /locus_tag="CRE_04015" /db_xref="WormBase:WBGene00084310" mRNA join(<27539..27679,31708..31832,31941..32361, 32409..>32411) /locus_tag="CRE_04015" /product="hypothetical protein" /db_xref="WormBase:CRE04015" /db_xref="WormBase:WBGene00084310" CDS join(27539..27679,31708..31832,31941..32361,32409..32411) /locus_tag="CRE_04015" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05117.1" /db_xref="WormBase:CRE04015" /db_xref="WormBase:WBGene00084310" /translation="MCEVLILMLNSFYRVYYQLFDLCEHTLISVLILLVVLICFIPAL FKTEEQRPLFTIFVLVCGVVGGLIVVISVVYLYRYCLKRRNPVTTTVNPDFKREHIRS VVVGLSRPLPLPQEFLNSSTPKHTSTTTLGYEDDHDIENSISVVPLIVTNDSNYALRL SQNTYNSETSKCLSTFQNTLSALLSVSPAPTRAHSAELHPPEVSEEIRRSSFEVQRGT GRQLPSTEGLE" gene complement(<32719..>35079) /gene="Cre-ztf-22" /locus_tag="CRE_04071" /db_xref="WormBase:WBGene00057584" mRNA complement(join(<32719..32887,32934..33350,33403..33964, 34020..34173,34996..>35079)) /gene="Cre-ztf-22" /locus_tag="CRE_04071" /product="CRE-ZTF-22 protein" /db_xref="WormBase:WBGene00057584" CDS complement(join(32719..32887,32934..33350,33403..33964, 34020..34173,34996..35079)) /gene="Cre-ztf-22" /locus_tag="CRE_04071" /note="contains similarity to Interpro domain IPR015880 (Zinc finger, C2H2-like); coded for by the following C. remanei cDNAs: DR779858, DR779545" /codon_start=1 /product="CRE-ZTF-22 protein" /protein_id="EFP05123.1" /db_xref="InterPro:IPR015880" /db_xref="WormBase:CRE04071" /db_xref="WormBase:WBGene00057584" /translation="MRTMDQGQLQKLLNAAAAVSTSPQQNPMMLFSSMTSQTTTPPVW PIKSHSVVNTTPTQNSFDANLAALFLLQQAYQNQQALSTTAFPTLPSPSISTPTFIPS TFSLPLFSSPTTIPTTLPTPTLTPTIPTPVTPQCTTPPGVFNTLNSLLQMPTRFDSSK SMNKCTTPPIIIKPSTTPIPDSIRKISSVSIPAELVPVILTPSASASGSSSLPASSPS TSSKKEEEDEDDDEEEFVDIESVDVAIDGKEKRKAHVEFYRRMKYMRQHFRDKALQCG MCKKKVENHENAMAVHVAEHAEAGCYQCRLCGWQAIDKYKIYTHMREEHPRKVDMFVD KRDMPKMCLVLSQCFPKTSSRPKKESNRNADTYLTEILKVPTLEQTCRICHGNVRREK AAMIRHVQTNHTIKCKTCKTISTTLEDQLIHQDESHQLKEPKMSVHYAPSAAAIYLLP ALEKCFPNEKQ" gene <42822..>47802 /locus_tag="CRE_04016" /db_xref="WormBase:WBGene00057583" mRNA join(<42822..42911,43568..43666,43870..44447,44698..44844, 45081..45205,47138..47231,47539..47652,47697..>47802) /locus_tag="CRE_04016" /product="hypothetical protein" /db_xref="WormBase:CRE04016" /db_xref="WormBase:WBGene00057583" CDS join(42822..42911,43568..43666,43870..44447,44698..44844, 45081..45205,47138..47231,47539..47652,47697..47802) /locus_tag="CRE_04016" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05185.1" /db_xref="WormBase:CRE04016" /db_xref="WormBase:WBGene00057583" /translation="MKRAQLTRERESKWFNIQLIFFPPELRSLSQHHQFEHDRQRRMS HFARSNAVHYAAAPPPRKQISSPLPEIPRRIYDRGHAHSRSWNPGAQPSPPPLLDPNP YRQFYEPVIQKRSTAQDVVDDSYVLQVSSSRRLEVPIIQEPPSPTPLNSERRRSHVVQ RQAKSFETNPVERRHPLDHRSYTLQSAVEAQREEVSAACQSLWAAKGHLEQLDALGIS EPSSVSTSFESNTDSQATADTVERQASQVAKAKRSVFNKTHHVESDIFGSLPHIKKRL TLEEARTRSTESRKNSAREWEKERKKNNLNILLQRQFLSTAAVSSMESNNSTDDSDQR FSNSFDSTRSELERRRLSLLNQADANSSDEACSSVQRINNRDYSVDLRSDSLFREWSR IDPAYDPLDRRLQRGHTVDHSVMNFSQPRHFQRQFSLATSPIAQTPSRRQQTMVSYRN " gap 46219..46228 /estimated_length=10 gene <49237..>50680 /locus_tag="CRE_04017" /db_xref="WormBase:WBGene00057585" mRNA join(<49237..49405,49499..49605,49786..50028,50078..50161, 50214..50351,50402..50526,50578..>50680) /locus_tag="CRE_04017" /product="hypothetical protein" /db_xref="WormBase:CRE04017" /db_xref="WormBase:WBGene00057585" CDS join(49237..49405,49499..49605,49786..50028,50078..50161, 50214..50351,50402..50526,50578..50680) /locus_tag="CRE_04017" /note="contains similarity to Interpro domains IPR012335 (Thioredoxin fold), IPR010987 (Glutathione S-transferase, C-terminal-like); coded for by the following C. remanei cDNAs: DR408815" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05124.1" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR012335" /db_xref="WormBase:CRE04017" /db_xref="WormBase:WBGene00057585" /translation="MPDDANFTEEITKWVESLPNWGKAAAAGGLALAVYIPYKFFATQ ARKSPVKEDWKPDVVYLYQFPRTRLLPNLSPFCMKVETWLRMSDINYEIPKCSFTLRS KEGTMPFVEFNGKEYYDSSFILRDVDELIKHTSLDDHLSAEQKSTSRAFEAMTEKSMA ISAWFYRMENVEKLLDLFDPKVFGLFGSLFKMIDSKFYASTLLKRISGSDIGFHSRED IIKIGSDDLKAISKYLGNKHYFHGFKPTKVDACIFSNLCQIYYAPYTSEHRDLIEGEC KNLVEYIERIKNRYWPDWDEVTTKYSNETSNWKKRHVARNGNGVKH" gene complement(<50963..>54073) /gene="Cre-mac-1" /locus_tag="CRE_04072" /db_xref="WormBase:WBGene00057586" mRNA complement(join(<50963..51215,51260..51443,51491..52284, 52332..52581,52628..53331,53586..53792,53940..>54073)) /gene="Cre-mac-1" /locus_tag="CRE_04072" /product="CRE-MAC-1 protein" /db_xref="WormBase:WBGene00057586" CDS complement(join(50963..51215,51260..51443,51491..52284, 52332..52581,52628..53331,53586..53792,53940..54073)) /gene="Cre-mac-1" /locus_tag="CRE_04072" /note="contains similarity to Pfam domain PF00004 ATPase family associated with various cellular activities (AAA); contains similarity to Interpro domains IPR003959 (AAA ATPase, core), IPR003960 (AAA ATPase, conserved site), IPR003593 (AAA+ ATPase, core); coded for by the following C. remanei cDNAs: DR777635, DR782342" /codon_start=1 /product="CRE-MAC-1 protein" /protein_id="EFP05128.1" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR003960" /db_xref="PFAM:PF00004" /db_xref="WormBase:CRE04072" /db_xref="WormBase:WBGene00057586" /translation="MPGAGMGFASDPSLLPRIQAYARKNPGKKYFKPEMVAYDLKQEH PEYQRKNHKVFMGMVREALERVQLAAKEEEEEKLEEREAMDDVQEITHEPVKRVIETR KRKAPARRASSGTAIAQEVILSDSDEEHEIAAKQLESLKPNNRANKSILNLYSTNSAK KSLPKTPQTSQPQTPSADKRNQNNKKSPGSSQSARGETLPRGLGAVTDTISPRESHVK FEHIGGADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTLFAQAVAGE LGVPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQRE MERRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSVAVLNDPETSSVSSSGVLVIGT TSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICRVNLADDVTLKQIAKLTPG YVGADLQALIREAAKVAIDRVFDTIVAKNEGHKNLTVEQIKEELDRVLAWLQGEDDPS ALSALNGGLRISFEDFERALSAIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSIL YPIKRAEDFAALGIDSRPQGILLCGPPGCGKTLLAKSVANETGMNFISVKGPELLNMY VGESERAVRTVFQRARDSQPCVIFFDEIDALCPKRSHGESSGGARLVNQLLTEMDGVE GRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPLLS DDIDFQEIAKLPELSGFTGADLAALIHESSLLALQARVLQVDINLSLFPNYLNFQNDE SVRGVGMRHFREAASRIRPSVTEADRKKYEHMKKVYGLKQADA" gene complement(<54829..>56802) /locus_tag="CRE_04073" /db_xref="WormBase:WBGene00057587" mRNA complement(join(<54829..54915,55024..55703,55864..56089, 56140..56175,56223..56466,56690..>56802)) /locus_tag="CRE_04073" /product="hypothetical protein" /db_xref="WormBase:CRE04073" /db_xref="WormBase:WBGene00057587" CDS complement(join(54829..54915,55024..55703,55864..56089, 56140..56175,56223..56466,56690..56802)) /locus_tag="CRE_04073" /note="contains similarity to Interpro domains IPR008116 (Sequence-specific single-strand DNA-binding protein), IPR006594 (LisH dimerisation motif); coded for by the following C. remanei cDNAs: DR782481" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05197.1" /db_xref="InterPro:IPR006594" /db_xref="InterPro:IPR008116" /db_xref="WormBase:CRE04073" /db_xref="WormBase:WBGene00057587" /translation="MFQPRGAGGPPPPGLQLQQQMPPIQPSQPQIIEMAKEKLTTYVY EFLLQTGATKTAEAFKEEVLNQNPQLQTPVKPSEKTFLLDWWVVFWDLWSAAPERREG GEPYMNSSSAEAKYFHESMIGIPPVMNGHFGPPMGMDMMGGHPGAFGGRFPPGRMPPT GMPGAFPPMFNPGLQRMPNPGMRMAPPGGPFPGGMARSGVPGAPMGDMPGMPRYDFMA PGGPQQFAGGSSGMMPNGAMPHMSLNSPSMGPPPGTDPNMPGAFMGMAPMPPTSSSAM PFGMSEQPMSAGPAGGAPGPGTPGMGGSVSGTGPGSVPPVASTSVGSVGTPTSMGQTQ TIQPKQEITSNGEEMKTEALTPTGAASGSVGAPASAAVASVSMNGGGGSGSAPGSAHS VNNNINPSTPSGGPLSNPLSNPMSNPPLSSGPAPGSADAFKDDSEISKIREGLLDGFK TEVAGGGGGWD" gene <59909..>60797 /locus_tag="CRE_04018" /db_xref="WormBase:WBGene00057588" mRNA join(<59909..60028,60073..60183,60229..60372,60547..60627, 60678..>60797) /locus_tag="CRE_04018" /product="hypothetical protein" /db_xref="WormBase:CRE04018" /db_xref="WormBase:WBGene00057588" CDS join(59909..60028,60073..60183,60229..60372,60547..60627, 60678..60797) /locus_tag="CRE_04018" /note="contains similarity to Interpro domain IPR005813 (Ribosomal protein L20); coded for by the following C. remanei cDNAs: DY526612, DR782213, DT934043, DY526989" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05173.1" /db_xref="InterPro:IPR005813" /db_xref="WormBase:CRE04018" /db_xref="WormBase:WBGene00057588" /translation="MHLSTTLSLRRILNSGFHPFQVIPKPDVWMKRERLNRFTAWQYA SERSTVKGAYRKEDKIFTYLSMQREDEKKLEKFHAEERVRTALAEHDMEYSKFKTVLS QSHILLDNICLSQLAIYEPRSFRSLVAFAKELARQEGMNVIPDDSEFSYDVHVDNKSV LRKPLPRAVEYTRGATENHTNKPRKLREEEY" gene complement(<61047..>64114) /locus_tag="CRE_04074" /db_xref="WormBase:WBGene00057589" mRNA complement(join(<61047..61152,61201..61568,61614..61754, 62130..62213,62392..62484,62536..62686,63933..>64114)) /locus_tag="CRE_04074" /product="hypothetical protein" /db_xref="WormBase:CRE04074" /db_xref="WormBase:WBGene00057589" CDS complement(join(61047..61152,61201..61568,61614..61754, 62130..62213,62392..62484,62536..62686,63933..64114)) /locus_tag="CRE_04074" /note="contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300); contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300), IPR000276 (GPCR, rhodopsin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05162.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR010726" /db_xref="InterPro:IPR017452" /db_xref="PFAM:PF06976" /db_xref="WormBase:CRE04074" /db_xref="WormBase:WBGene00057589" /translation="MSNSTDSTTVFETFLLEYGRIFHPPMVLLLCISGALGHMLTITT LSSMLNPTNMFLISMSCSQLALCINFLYSTFFKFMSDQLCQPFFFSYYMASTMHFSVT ISVLVHMSAVFHVVALSLIRFFSLAQLSSANSNVPWFTWQKSRVAIVAIYVSVIFLCI PLHFTSQLTEVTENEGCAERYPMLRNKVAYQLTYTQSIWLRNLNFWLFYLVAKVVPSI ILCIMTCLILDQLKKIQVLSSRFSNVERDKQHSRTTNMILAIMVLFIIVELPQGVLAV LSTISSVKLIYELGDLTELFTLLTSIIIFTLLCSMNGKIRSAFKELACVRSIGRIFAT VCPPPSPVAASSSGHDALLEHNTIIITNCHIDKSENYAVL" gene complement(<72786..>75326) /locus_tag="CRE_04075" /db_xref="WormBase:WBGene00084320" mRNA complement(join(<72786..73428,74218..>75326)) /locus_tag="CRE_04075" /product="hypothetical protein" /db_xref="WormBase:CRE04075" /db_xref="WormBase:WBGene00084320" CDS complement(join(72786..73428,74218..75326)) /locus_tag="CRE_04075" /note="contains similarity to Brugia malayi Pao retrotransposon peptidase family protein.; TR:A8Q1R7" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05233.1" /db_xref="WormBase:CRE04075" /db_xref="WormBase:WBGene00084320" /translation="MGIGPGDDNESFQIYISRGIEEDSKLPFMTLVTPEGHNLLALAD CGASTSLISTQTATKLQLRIVGQRNLRFKGLISETRDEDCKFYRLEVIDQSNNVWAAT VASYSGIKIPFSAPTLSSSEYNQLDSLRFNITKIKDLQQFNGRPVDIILGNNLLGNIH QQLITLDSGRMVTRTIIGSIIYPPMVKNALFPVGGNKPIVVTDDMEHIVVHTLDTPDY DLPEDGRLEPKSNVSNQKLAKQVEQHWNLELLGIEPPEVVSSKARLNEQIVEHQKRSS VRDENNLISVQFPYNGREQYLDDNFPVAAQRLVSLTAGQTIETRMAYDTIIRKQIDSG IVEIVTPDMKPSGPVYHFPHRGVRKESSVNTKLRIVPITANKVHTADAEPVRPIDYLI PQSSMVLPESSKTISEVLESGKTEKLTRRLIESTAAVRDNLWNVFSDEYYVLLRESMP RSTAHNKSPPTPGTTVLIVTEKVARYMWPIGVIQKLISSKDGKVRAVEVKIGQKVFQK SVNHLIPLEIPAEERQDQDAPAAGTPSDLHKQITPAKAPPQRTRPYLPRRAKENKVTI GHDQQLGSPSNQPLASA" gap 73441..74088 /estimated_length=648 gene <75436..>76837 /locus_tag="CRE_04019" /db_xref="WormBase:WBGene00057591" mRNA join(<75436..76432,76497..>76837) /locus_tag="CRE_04019" /product="hypothetical protein" /db_xref="WormBase:CRE04019" /db_xref="WormBase:WBGene00057591" CDS join(75436..76432,76497..76837) /locus_tag="CRE_04019" /note="contains similarity to Pfam domain PF00665 Integrase core domain; contains similarity to Interpro domain IPR001584 (Integrase, catalytic core)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05238.1" /db_xref="InterPro:IPR001584" /db_xref="PFAM:PF00665" /db_xref="WormBase:CRE04019" /db_xref="WormBase:WBGene00057591" /translation="MELLALESATNLALNLMNELHMPVNQVIFFSDSTCVLHWVLHKV GNHVGLKWVANRVTNIHKNLAKLTELQLNPEMRYVPTNANPADIASRGCTLAELKVNK LWHHGPSFLERPEEDWPQTLETTPPDARMFHLFVVNDGEKVLSRELNKLPNQDSPETA VVNSMEEKELCKYESIVPYSRTNDMRKLTTTCNYVLRFVHSCIKSRNNRFPSCQYSYQ SMTLQRYDDADKEKDEVTKRRITRTFIIAEHYRDSKLRMGQEPPAHLKPVLSPDGLYR HNRPYVNSRHPRHSDEMKRPIIIIHTYQLATSGSERCHIGHPTKILDTENWNTRQSET LPSIRSQLVAPFAFVGLDYLGPLRYKSKDEYGKIWVLLVTCIVTRAIHLEIVQDNTTH SFIMALKRYFGRRGVPQSILSDNSPTFKLGYSMMNTDIKTIINKSLTLTSLGY" gene <77428..>79178 /locus_tag="CRE_04020" /db_xref="WormBase:WBGene00057592" mRNA join(<77428..77571,77626..77720,77768..78139,78188..78347, 78401..78561,78608..78732,78781..>79178) /locus_tag="CRE_04020" /product="hypothetical protein" /db_xref="WormBase:CRE04020" /db_xref="WormBase:WBGene00057592" CDS join(77428..77571,77626..77720,77768..78139,78188..78347, 78401..78561,78608..78732,78781..79178) /locus_tag="CRE_04020" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PGM0" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05196.1" /db_xref="WormBase:CRE04020" /db_xref="WormBase:WBGene00057592" /translation="MISQKKPLALCEICVRQISGDADNVTKCENSFECQLCFGIMDQA MIDEVGEKVQEELEKLPYDSNSFILALNLPVGQTLREILVSRLRPDFNGTLVQVPHKV RNVDGYLKKLGSVSFICNVQIFKEPSFKYSGKRPTLSSDLQLMITFEQTESDLTDLQF LQKEFPNDFRVGKRNRYNHQEAPSSCSKQQLQQVTGRINEHIANKYIFSSPTRKCSFS LSFERDPVYVAGRYCKYSRCLPQSPWSEDKDAPREPGNSVSEKVCDILKKHFGASDSK FVTSGREDIDVRMLGTGRPFVVELRNCRITAPVRGLNYLETLKSIEESINSQKDIKIN SLTRVARDVAEKLSVGEEDKRKQYCAYCYSILPISDEQFSTARSKIPLTIVQKTPVRV MKRRALLDRERTIFSMDFLKLDDHHFEVRLETQAGTYIKEFVHGDFGRTRPSLAELLG VEHGEVDILELDVEKVDLEWPPKLKEGQAPIKFR" gene <79381..>81777 /locus_tag="CRE_04021" /db_xref="WormBase:WBGene00057593" mRNA join(<79381..79469,79520..79612,79665..79974,80158..80466, 80513..81214,81259..81498,81622..>81777) /locus_tag="CRE_04021" /product="hypothetical protein" /db_xref="WormBase:CRE04021" /db_xref="WormBase:WBGene00057593" CDS join(79381..79469,79520..79612,79665..79974,80158..80466, 80513..81214,81259..81498,81622..81777) /locus_tag="CRE_04021" /note="contains similarity to Pfam domain PF01166 TSC-22/dip/bun family; contains similarity to Interpro domain IPR000580 (TSC-22 / Dip / Bun)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05232.1" /db_xref="InterPro:IPR000580" /db_xref="PFAM:PF01166" /db_xref="WormBase:CRE04021" /db_xref="WormBase:WBGene00057593" /translation="MGESSAQVAEGPQPKPSRFQFVPVPGEFTRGRWKCRDSYHPNAE TLEFEKNKTKEEANPEKISVFFKLRQPEEEESTIQVTSVENKEPDNGDEVSNSSESII ITRKNGVTIVRKTSNSLLPEKYDQIRELSIDDFENKPDEKAQQVPPTPMNTPPASMAV LDTGSFQIQAIVDSSLSPHSSRKPSNEDKTDPQKLADSSITSITSSSSLPLETSKPTR HFQVEPVVLSEPSTPAPVAPAPSIETLAPSPTVHSENHPLNEPTFQVIQTEESKNMSM DSVKNVIDAALMPPQTDRLNLVDEVETPTNVMITVSAALEKKEVCICDRKFLKKEIVF FLSNKFTISKEIIHYFQTAAAGSVGSLDACGIPIACPPISAPHSTPYGTPKETQNIPI FEEVFSTNVTSTPPTIITTPTAPTTAPASSPVSSSVPASASSSSVTLPSVTTTATVNT SALTTPSAIDSHTPIDNKIEQAMELVKTHLTYAVREEVDTLRNTIAELEYQMREFQYE CNYYRQNCSPEVVDQASAFVHQQMSAHQRPTRKAVSSTNVILDGISAQNASASASASS AHMRNLQNQIQQMKQIAPITTNISTNTATYNSTPSATVPPKPSPTTSESSLNNATGNT PGAPPTSN" gene <82089..>85311 /locus_tag="CRE_04022" /db_xref="WormBase:WBGene00057594" mRNA join(<82089..82182,82230..82519,82564..82785,82833..83060, 83110..83714,83761..84064,84118..84414,84654..84784, 84834..85032,85078..>85311) /locus_tag="CRE_04022" /product="hypothetical protein" /db_xref="WormBase:CRE04022" /db_xref="WormBase:WBGene00057594" CDS join(82089..82182,82230..82519,82564..82785,82833..83060, 83110..83714,83761..84064,84118..84414,84654..84784, 84834..85032,85078..85311) /locus_tag="CRE_04022" /note="contains similarity to Pfam domains PF01751 (Toprim domain), PF01131 (DNA topoisomerase); contains similarity to Interpro domains IPR013826 (DNA topoisomerase, type IA, central region, subdomain 3), IPR013825 (DNA topoisomerase, type IA, central region, subdomain 2), IPR006154 (Toprim subdomain), IPR013824 (DNA topoisomerase, type IA, central region, subdomain 1), IPR000380 (DNA topoisomerase, type IA, core), IPR003602 (DNA topoisomerase, type IA, DNA-binding), IPR003601 (DNA topoisomerase, type IA, domain 2), IPR002052 (N-6 adenine-specific DNA methylase, conserved site), IPR013497 (DNA topoisomerase, type IA, central), IPR006171 (TOPRIM); coded for by the following C. remanei cDNAs: DR406974" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05165.1" /db_xref="InterPro:IPR000380" /db_xref="InterPro:IPR002052" /db_xref="InterPro:IPR003601" /db_xref="InterPro:IPR003602" /db_xref="InterPro:IPR006154" /db_xref="InterPro:IPR006171" /db_xref="InterPro:IPR013497" /db_xref="InterPro:IPR013824" /db_xref="InterPro:IPR013825" /db_xref="InterPro:IPR013826" /db_xref="PFAM:PF01131" /db_xref="PFAM:PF01751" /db_xref="WormBase:CRE04022" /db_xref="WormBase:WBGene00057594" /translation="MALTVLMVAEKPMLADSIAHLLSNGQARKRKGWNGVCSVSEYDG QFNGKNAKFKVTSTCGHVMSLDFPAKFNNWERVDPAELYSAPAVKIEANPKMKMNEFL ASEAKNADYLVLWLDCDKEGENICFEVVDAVKSAMFKNRPDYMSDVYRAHFSAITEKD IKAAMKNLSRPDQNMALSVDARQELDLRIGCSFTRFQTKFFQGKYGDLDSNVISYGPC QTPTLGFCVTRHDQIVQFKPEAYWVLKTTFSCDSQTFSPEWQRGRIFDAEIARLFVDR IKKSHSGVVVDVSKKEARKERPCALNTVELMRVASSSLGLSPSTTMHVAESLYTQGYI SYPRTETTAYPANFDLNGTLKILSGDRKWGSVVSQVLAEGIKRPKSGVDKGDHPPITP MRANTGNLSGDMARIYEYVSQHFVATLMKQCVYEVTTVKMECGEEQFTIQGKNVIDPG FTAVMPWLSVEEECSVPKSLQQIGARIELQDAQIQARETTPPGYLTESELITLMEKHG IGTDASIPVHINTITQRNYVTVESGRRLVPTRLGQCLVRGYWKVDPELVLPTMRSELE EQLNLVASGKADYHDVKNHALKMFEMKFQFFVNNIPAVDTLFEASFTTLSDTGKPFSR CGKCRRYMKLVQTKPQRLFCPTCQETYSVPNFKDGVLKVIGDHKCPLDDFDIILWQGA GGKLARSFTLCPFCFNNPPFEKMPQGSGCDNCVHPSCQYSISSNGVCACLQDCGGVML LDTQSHPKWRMTCNKCPSVVGLFDGALKVKVDRNNSCEECGSQFIKAEFKPNSGKPGA VEYESSSYEGCIFCDAMKKYPDAINMNHAYLTEESRLKNTQPSRRGGRGRGGSRGGGR GRGGRGRGRGR" gene <85504..>85916 /locus_tag="CRE_04023" /db_xref="WormBase:WBGene00057595" mRNA join(<85504..85752,85806..>85916) /locus_tag="CRE_04023" /product="hypothetical protein" /db_xref="WormBase:CRE04023" /db_xref="WormBase:WBGene00057595" CDS join(85504..85752,85806..85916) /locus_tag="CRE_04023" /note="contains similarity to Pfam domain PF00639 PPIC-type PPIASE domain; contains similarity to Interpro domain IPR000297 (Peptidyl-prolyl cis-trans isomerase, PpiC-type); coded for by the following C. remanei cDNAs: DR777032" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05228.1" /db_xref="InterPro:IPR000297" /db_xref="PFAM:PF00639" /db_xref="WormBase:CRE04023" /db_xref="WormBase:WBGene00057595" /translation="MPPKKAPKGGSGKEEPKKEAKGGTAVKVRHILCEKQGKALEAIE KLKAGMKFNEVASQYSEDKARSGGDLGWMTRGSMVGPFQDAAFALSNSSCDKPIYTDP PVKTKFGYHVIMVEGKK" gene <86084..>87282 /gene="Cre-efl-2" /locus_tag="CRE_04024" /db_xref="WormBase:WBGene00057596" mRNA join(<86084..86361,86411..86560,86606..86696,86742..86991, 87038..>87282) /gene="Cre-efl-2" /locus_tag="CRE_04024" /product="CRE-EFL-2 protein" /db_xref="WormBase:WBGene00057596" CDS join(86084..86361,86411..86560,86606..86696,86742..86991, 87038..87282) /gene="Cre-efl-2" /locus_tag="CRE_04024" /note="contains similarity to Pfam domain PF02319 E2F/DP family winged-helix DNA-binding domain; contains similarity to Interpro domains IPR011991 (Winged helix repressor DNA-binding), IPR003316 (Transcription factor E2F/dimerisation partner (TDP)), IPR015633 (E2F Family)" /codon_start=1 /product="CRE-EFL-2 protein" /protein_id="EFP05121.1" /db_xref="InterPro:IPR003316" /db_xref="InterPro:IPR011991" /db_xref="InterPro:IPR015633" /db_xref="PFAM:PF02319" /db_xref="WormBase:CRE04024" /db_xref="WormBase:WBGene00057596" /translation="MSSKDPASIDLSTVGSLLDDTDQSGSKEVFRSQQSLGLITQRFM SLRAKNETMNLNDVAKELSIPKRRVYDVVNVLEGLGYVQKVEKNNIKWIGDDVKDEEQ NQLEARVEILRQEEKILEMMIQDAQAVINLHFEDPIARPYNYIRKEDIRNTSELDTKS IIMKSEHDDSKFNVLIRDPTGSSAHEMIVKNINGVRSHALLFSNEPTITVKQESPEKD DPLPEEMNNEWSLSDVGSNQNLEQIKTEDPDEIDTEDLETFVLPSTSTNPQNTQYLPE TPGRGLFFSPFKSLIDPCILPAFSDDLTSGYINITTPSRAAAEHALQADVEPPSIMDF FND" gene <87645..>88430 /locus_tag="CRE_04025" /db_xref="WormBase:WBGene00057597" mRNA join(<87645..87729,87773..87950,87995..88120, 88172..>88430) /locus_tag="CRE_04025" /product="hypothetical protein" /db_xref="WormBase:CRE04025" /db_xref="WormBase:WBGene00057597" CDS join(87645..87729,87773..87950,87995..88120,88172..88430) /locus_tag="CRE_04025" /note="contains similarity to Pfam domain PF01300 yrdC domain; contains similarity to Interpro domains IPR004388 (Sua5/YciO/YrdC/YwlC), IPR006070 (SUA5/yciO/yrdC, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05212.1" /db_xref="InterPro:IPR004388" /db_xref="InterPro:IPR006070" /db_xref="PFAM:PF01300" /db_xref="WormBase:CRE04025" /db_xref="WormBase:WBGene00057597" /translation="MTTGRILRLTADNMEEAIDTAVSVFLRGGIVALPTDTLYGISTL LPFSDRLYALKQRPFEKPLGIFLPSPTSMKLVSKQTISDELANCLLPGPVTLMFERLP NLPDEFNPGVVNVACRVPDCAIVSRICRKLGQPLAQTSANVSGSPLNPTSIDHFKNLH SNIDLILDNGQIVSSGEGSTIVDLTVESCFRIVRSGCAESETIKKLKSFGLTEIQ" gene <88611..>91456 /locus_tag="CRE_04026" /db_xref="WormBase:WBGene00057598" mRNA join(<88611..88668,88721..88776,88874..89809,90113..90364, 90408..90845,90889..91008,91053..91155,91203..>91456) /locus_tag="CRE_04026" /product="hypothetical protein" /db_xref="WormBase:CRE04026" /db_xref="WormBase:WBGene00057598" CDS join(88611..88668,88721..88776,88874..89809,90113..90364, 90408..90845,90889..91008,91053..91155,91203..91456) /locus_tag="CRE_04026" /note="contains similarity to Interpro domain IPR001638 (Bacterial extracellular solute-binding protein, family 3)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05205.1" /db_xref="InterPro:IPR001638" /db_xref="WormBase:CRE04026" /db_xref="WormBase:WBGene00057598" /translation="MLGDQTEKKTGGPQSRKKKESEEEKINNRDEVDFVDEKIHLKMS SCLSSGSLDSAPSSATSSAPSSTSSIRARRNWSVFSERLRETLSKSRKSSTADSLILF DVKCVEISSENSDCMWIYQRDISSFDSDFDDYDDSHLRIFKFFPPNKPTSLHSLASGF DNTGNVRIWPGSEALAWLILKDSSRILARGNRILELGAGFLGLSSFLIAKKFPETTVW ITDGNLESINSLKQIRNANPDLLNRVHVQQQIWGRDQLKTSRFNTILAADCVFFTEHH ESLMKCIHSHLAPNGNAVISSPRRKQSLQKFLDYVQNAWSDELSVDLNTEINAILEQK IGGIWISEEDKDEKYPELKGALQLGVLKTADSVSLRVGGRNGLDLEIKEEVVNQVAAF VWDTVSENWADDLARFTVHAGRQKINMDDISLLTRRNPELVRFQAACKLAGVDHHQDA AGQKTGKGRKRKKEEVVSIQHSKLSEDDITVLDDNNALHTPKSYLKKPKLQEEISKGR LTSTPKVAERTLKFPDDITPIRPTDNEVFSSNLVNLSVIEEEKTSLEDKQNEEEEQDS FDVFGSTKDDSSKTITNISSLLKRAEEYSSVVESTNDRLENERLERMIPADVEEVDNV SIDSFDNYNVHEEPPVDKSAGTPKNAVFNNKMSSFAFDDEDSFDEPVVIHVSKTTPKN ASTSAEKKYNNEVLITKNASNFKGKGVETTPKTSTATKKNKLQRDHDSFDEFDFDI" gene <91617..>92913 /locus_tag="CRE_04027" /db_xref="WormBase:WBGene00057599" mRNA join(<91617..91750,91766..91894,91943..92601, 92651..>92913) /locus_tag="CRE_04027" /product="hypothetical protein" /db_xref="WormBase:CRE04027" /db_xref="WormBase:WBGene00057599" CDS join(91617..91750,91766..91894,91943..92601,92651..92913) /locus_tag="CRE_04027" /note="contains similarity to Pfam domain PF07942 N2227-like protein; contains similarity to Interpro domain IPR012901 (N2227-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05116.1" /db_xref="InterPro:IPR012901" /db_xref="PFAM:PF07942" /db_xref="WormBase:CRE04027" /db_xref="WormBase:WBGene00057599" /translation="MSQHPEEGESSVNDETRAIEEVINAFMYYGKFGTEKILKTIQQM KLFSSSIDMISFFRNYPQDFQILVVNKNKEFVESMKQRIEHNHSILKMIANSASGMIG ENHTKAFRIHQARRPTGEFLSKVLSTIRQICREWSSEGLPEREATFKPIIEELNSIFP TETERHNIRILVPGCGLGRLAHDLIEQGYTVQGNEFSYFMLFTSFFILNCCKEVDTFF EKPRVNFLFQVDQFTIYPYLFDKSNCWKSEDRLRGVTFPDKTLISSVTNRPNSFSMCA GDFLEIVKDTQFDAIVTAWFIDTANDIFKYIDAIYDALPENGIWINVGPLTWHFEDIA GEMSIELPYSDIMLRIRQKGFEIVSEKEIDSKYTVNRLSMLQNQFNCAYFYARKGGQK PQ" gene complement(<93248..>94119) /locus_tag="CRE_04076" /db_xref="WormBase:WBGene00057600" mRNA complement(join(<93248..93373,93430..93624,93672..93845, 93891..94009,94059..>94119)) /locus_tag="CRE_04076" /product="hypothetical protein" /db_xref="WormBase:CRE04076" /db_xref="WormBase:WBGene00057600" CDS complement(join(93248..93373,93430..93624,93672..93845, 93891..94009,94059..94119)) /locus_tag="CRE_04076" /note="coded for by the following C. remanei cDNAs: DY527513" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05223.1" /db_xref="WormBase:CRE04076" /db_xref="WormBase:WBGene00057600" /translation="MNLVNRAAVLLPITSRYSSLGSFQSSGFAFTRALSDQKPAISSA PSTSTLLKVDWLLQKITPLVLKSNVRDFIDICKEDVQFDDRIFSKKLNGRTQLMSHIA KVRMYYRYLSPFNKVEWIGSCVYENEDVIVVLWRLTTLDSSFMTYFPSFITKKENKMI VKEGAMDVRIDQSGHVLQIVNRAITASDREGAKSLAKLKEQQYQEEVRNEEKEMRKEF DRQYHS" gene complement(<94428..>96710) /locus_tag="CRE_04077" /db_xref="WormBase:WBGene00057602" mRNA complement(join(<94428..94622,94672..94886,94933..95250, 95305..95566,95611..95892,95942..96059,96109..96217, 96280..96559,96603..>96710)) /locus_tag="CRE_04077" /product="hypothetical protein" /db_xref="WormBase:CRE04077" /db_xref="WormBase:WBGene00057602" CDS complement(join(94428..94622,94672..94886,94933..95250, 95305..95566,95611..95892,95942..96059,96109..96217, 96280..96559,96603..96710)) /locus_tag="CRE_04077" /note="contains similarity to Pfam domain PF00566 TBC domain; contains similarity to Interpro domain IPR000195 (RabGAP/TBC); coded for by the following C. remanei cDNAs: DR781699, DY528965, DY527771" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05150.1" /db_xref="InterPro:IPR000195" /db_xref="PFAM:PF00566" /db_xref="WormBase:CRE04077" /db_xref="WormBase:WBGene00057602" /translation="MLPYLAYRYVKNKREKNQRDMDSDLDSMVRSIVPDKAVISIPGV AAKLGEDSKEYIPGVLSILEKSVGVFIEWRPSEDPDATWVMTSDDGNAEMVHSRSPEE KRDRGARVAFSMDVNDLSSFRNDEPKRGSGGFPSIRLICRDGSSQVPLFFRNSSTGEF IDRLQGYITLRRSHRDADLVIVVDQKSEALAKSVSMLDENGDILSRFMQNPYMTAMTG FSKITSFVQDQVIPSVLNDTDAVTQEEKIRLMRELRLAEEQMRVHSDAAGEFEVVTQL DLPPRPEIYRELPVSRELWNSFKLSNGSIDPMKLHHLKMNVFRGGLNAELRKEAWKCL LGYRQWHESDSEFEKRRTELAKQYHNMKSQWMSVTEDQEKRFSKFVKRKSLVEKDVAR TDRTVPFFQGEDNVNLIHLHNVLMTYVMYNFDLGYVQGMSDFASPLLFVMKDEVDTFW CFVGLMEMTHKNFEKDQAFIKLQMNQLRDLVMIINPKLANYLESEKSDDMYFCFRWVL VWFKREFSFLDTCKLWEVLWSGQPCPRFLLLICVAILDSQTNIIIDNHFGLTEILKHI NDLSMHLKVDEILTAAEAIFHQLSASQNKLPAHICQYLNIGESAVSSSNNSPSRSDPD REDL" gene complement(<97960..>101158) /gene="Cre-pqn-27" /locus_tag="CRE_04078" /db_xref="WormBase:WBGene00057603" mRNA complement(join(<97960..98040,98088..98367,98416..98810, 98858..99082,99133..99240,99284..99346,100659..100831, 100876..101022,101065..>101158)) /gene="Cre-pqn-27" /locus_tag="CRE_04078" /product="CRE-PQN-27 protein" /db_xref="WormBase:WBGene00057603" CDS complement(join(97960..98040,98088..98367,98416..98810, 98858..99082,99133..99240,99284..99346,100659..100831, 100876..101022,101065..101158)) /gene="Cre-pqn-27" /locus_tag="CRE_04078" /note="contains similarity to Saccharomyces cerevisiae RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex; mutant is deficient in Zip1p loading onto chromosomes during meiosis; SGD:YKL054C; coded for by the following C. remanei cDNAs: DY527861, DT933795" /codon_start=1 /product="CRE-PQN-27 protein" /protein_id="EFP05160.1" /db_xref="WormBase:CRE04078" /db_xref="WormBase:WBGene00057603" /translation="MSGGNWQNTWSQQPPQHPQQPQQDMYNQSQPGYGYNQSQARGPP QQQIRQNDYISYQHQRPSGAPNAFNRQPPHQQYQQNYMAQQHLHGYHHQQQPFMFNAN ANVFVPRNQIMQSHQDYGYYAGPPYQQHNHAQYTQNQFGITSSPSSSYNAMYQQEDAG FEAFAQFGQQSQQYLPSKELADQIQSSKCSSYLTEILVGCEQLIAEDEEESSTWISAI RQRFEDPQMDEESKKIGVKLIIEMAYSMESNQFRSIDPQNTFSNLLKTLSLELKGFLR KFIVPALGEYHESRKQFENDDRVFMAIFYAEVYVKLFLVRSCCWGDLNYCNFQENGSR FERIGEALADQIDEILKFQPKDEYMKSLIRAFKVAGAELDTSESLRRRVDQILTIMGG YAKGSPLLGESVKAQIFSLIECRTRGWDRPATRGPEVAGNVADRDQDSFDESTDNDLT EEERLFLESHLDQVESGRAGEDDFDDQEMMKEFGKFVKEELLQAEELKTAEMLQNCNI KGDDEENPATEEK" gene complement(<102293..>103072) /locus_tag="CRE_04079" /db_xref="WormBase:WBGene00057604" mRNA complement(join(<102293..102421,102521..102715, 103004..>103072)) /locus_tag="CRE_04079" /product="hypothetical protein" /db_xref="WormBase:CRE04079" /db_xref="WormBase:WBGene00057604" CDS complement(join(102293..102421,102521..102715, 103004..103072)) /locus_tag="CRE_04079" /note="coded for by the following C. remanei cDNAs: DR406229" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05214.1" /db_xref="WormBase:CRE04079" /db_xref="WormBase:WBGene00057604" /translation="MLQQNNELSNIFIQFQSSLAAQKMPSTQARQVLAHALIETLHNW CMQLFWMTVLCVINCCGEEDEKKTQKKQPERPEPKKRIEDIEQKMLRHLTSPIISGPL RPVRRNSKKRVFYSRPPSPQLFDIAEEE" gene <109599..>112483 /locus_tag="CRE_04028" /db_xref="WormBase:WBGene00057605" mRNA join(<109599..109670,109718..109874,109924..110462, 110526..111120,111170..112017,112064..>112483) /locus_tag="CRE_04028" /product="hypothetical protein" /db_xref="WormBase:CRE04028" /db_xref="WormBase:WBGene00057605" CDS join(109599..109670,109718..109874,109924..110462, 110526..111120,111170..112017,112064..112483) /locus_tag="CRE_04028" /note="contains similarity to Caenorhabditis remanei P17 (Fragment).; TR:A0MIX6" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05204.1" /db_xref="WormBase:CRE04028" /db_xref="WormBase:WBGene00057605" /translation="MRILAQSLLIASLLPIAIGFKTNRTSCFHYVSCLEATEANLKQC AGGTAISLTLEAKDVNIRDLVKYRALEFVGCQDRLLKEIVDFEALQILVNEDARECFE KLPESSKRVEQFTDSCDYVQPVSRNSSKGDALQCLIEFKQDREYCESLLECCPDHTRC GERMNAVSLSYQNARVKAEQIVYSMISCIVVNDPRFLREGARLQSLRDPYRNAGVPFL RPDAYTEARITRRLALTSTSTLSQRRERFLKKYSQIRQDLVTETSSKLAAESPEEVAT TIAPEEVTSQEDTTTSEVLTTPEAIEAPESTEAPESPAPEVIKESSEMHVNTIRNLIR SASDKDLSKYVSLISEGKFSELFGLAEKKKFKLATKFDEKLSAKMSKLKDLINEALSE KDKSSEVEKAVEKIEKAEKPELVAMEDKDSAAVFTISDELEQKNTLSESKLAHTIVSR NVAEAENVNAAEKAEKESEEPKVESKKEPKKADLEKKEDVKAVADEKKPGKLPLKIEK LEKEIDTKSENQELKKVIDDKERALLVESEIKNTADETKHILETLKSEESAVVGDDLP ALEKEDSAEKKDDATTTTTAPEETTTTLPAETEKPEVVKPELLNTDDVLTVTKPETEV EGSGEEEQDVTPSSEASTPISLLQSSKVSDGVIENVKRIRPRTEQTHCQQYASCWQTV LDYEQQCDRKYSTEVLSHGIDDSEILNILHNSSISHHEIVLKACLRPLDRSVHSTLKQ LLVIQRGVRKACLELGRNKIAVTDAEEALCDTEVPTTASIDEFISSEHVRSQSNHLTC RAKLEPVREACGIVRNCCASVDTCDNYISSSPVKKLETEAIRRLVKKQNDCETKMLQT LSYIHEQLSNPSRRRRFYYH" gene complement(<112773..>114548) /gene="Cre-alh-7" /locus_tag="CRE_04080" /db_xref="WormBase:WBGene00057606" mRNA complement(join(<112773..112894,112941..113247, 113292..113486,113536..114216,114261..>114548)) /gene="Cre-alh-7" /locus_tag="CRE_04080" /product="CRE-ALH-7 protein" /db_xref="WormBase:WBGene00057606" CDS complement(join(112773..112894,112941..113247, 113292..113486,113536..114216,114261..114548)) /gene="Cre-alh-7" /locus_tag="CRE_04080" /note="contains similarity to Pfam domain PF00171 Aldehyde dehydrogenase family; contains similarity to Interpro domains IPR016163 (Aldehyde dehydrogenase, C-terminal), IPR016162 (Aldehyde dehydrogenase, N-terminal), IPR015590 (Aldehyde dehydrogenase), IPR016160 (Aldehyde dehydrogenase, conserved site); coded for by the following C. remanei cDNAs: DR782164" /codon_start=1 /product="CRE-ALH-7 protein" /protein_id="EFP05120.1" /db_xref="InterPro:IPR015590" /db_xref="InterPro:IPR016160" /db_xref="InterPro:IPR016162" /db_xref="InterPro:IPR016163" /db_xref="PFAM:PF00171" /db_xref="WormBase:CRE04080" /db_xref="WormBase:WBGene00057606" /translation="MLLTDHKRGHLSSPYVFRKNTCSLFIGYSARMNSWLRLSAIKVS SRSYSLLPQGAQSYVGGKWTPSESGNSFDVLNPFNNQVVDRVANCTVKDAEKAVQSAV EGFDKWAYSYTAKQRGAILHKWFEILIQRETELATLLTKEQGKPLAEARGEIQYSAAY FDWYAGEARRVYGQVVPSPVQNRLHLHTREPIGVVALISPWNFPTAMIARKAAAALSV GCSAVVKPAEDTPLSALALAQTAEEAGIPAGVFNVITADRSNTAEISKFLCESTDVSA ISFTGSTPVGKLLLAQSASTVKRVCLELGGNAPLIVFDDADLDIAVAGTMATKFRCSG QTCVSANRIFVHEKIHDQYVSKLAAAMKEKLVLGDGMDPKTTQGPLVNQKAVDKCELL LSDALGKGSELICGGKRGEHGTSYEPTLITNVQSNTNIANTEIFGPIASIQKFRGNEE VLQAANDCRVGLAGYIFGKDPSRLQTFARRLEVGMVGVNEGLISCAEAAFGGVKESGI GREGGAQGVDEFTNWKYICTQY" gene complement(<114683..>115005) /locus_tag="CRE_04081" /db_xref="WormBase:WBGene00057607" mRNA complement(join(<114683..114775,114826..>115005)) /locus_tag="CRE_04081" /product="hypothetical protein" /db_xref="WormBase:CRE04081" /db_xref="WormBase:WBGene00057607" CDS complement(join(114683..114775,114826..115005)) /locus_tag="CRE_04081" /note="contains similarity to Pfam domain PF02939 UcrQ family; contains similarity to Interpro domain IPR004205 (UcrQ)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05194.1" /db_xref="InterPro:IPR004205" /db_xref="PFAM:PF02939" /db_xref="WormBase:CRE04081" /db_xref="WormBase:WBGene00057607" /translation="MRPTVVSMGKHFGNLGKMYGEHRFALAPNEQKAYKGFFDQAFVK TFKTYVWDQWYYYIPQTIGAYLLYDWAKKTNHEANRKNPADYANDQ" gene complement(<115212..>115810) /locus_tag="CRE_04082" /db_xref="WormBase:WBGene00057608" mRNA complement(join(<115212..115452,115499..115688, 115738..>115810)) /locus_tag="CRE_04082" /product="hypothetical protein" /db_xref="WormBase:CRE04082" /db_xref="WormBase:WBGene00057608" CDS complement(join(115212..115452,115499..115688, 115738..115810)) /locus_tag="CRE_04082" /note="contains similarity to Pfam domain PF07347 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a); contains similarity to Interpro domain IPR009947 (NADH:ubiquinone oxidoreductase subunit B14.5a); coded for by the following C. remanei cDNAs: DR776541, DR782414, DR779485, DT934647, DT937335, DR775534" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05133.1" /db_xref="InterPro:IPR009947" /db_xref="PFAM:PF07347" /db_xref="WormBase:CRE04082" /db_xref="WormBase:WBGene00057608" /translation="MSGRKIAAATVQNRSQTPFWNWLKQKLLASDRLPITPPPGIAGA DGKAVYQNPLRFPNTQAARPGSAELPTLPGGVHHKLADNYYLTRDGRRTVEPPKVLYS AGEFSGEPVQPVQVNQGVSTNFGLTAPTPGFGAEWNRSKENELSSQQNNTEYEYLQRF DKFAKSN" gene complement(<116805..>117636) /gene="Cre-drr-1" /locus_tag="CRE_04083" /db_xref="WormBase:WBGene00057609" mRNA complement(join(<116805..116951,116997..117203, 117256..117345,117415..>117636)) /gene="Cre-drr-1" /locus_tag="CRE_04083" /product="CRE-DRR-1 protein" /db_xref="WormBase:WBGene00057609" CDS complement(join(116805..116951,116997..117203, 117256..117345,117415..117636)) /gene="Cre-drr-1" /locus_tag="CRE_04083" /note="contains similarity to Interpro domain IPR008253 (Marvel)" /codon_start=1 /product="CRE-DRR-1 protein" /protein_id="EFP05166.1" /db_xref="InterPro:IPR008253" /db_xref="WormBase:CRE04083" /db_xref="WormBase:WBGene00057609" /translation="MCTIMFLIRYSCSVHSLHCQQSLTIDKPLCPLSRSITALKPISR SIIMQTLGNIFENEDNIFLKMPHFFKPLQALNAIILAICIGSTASGDNGILWFTIIVS LIISAAATVIFALRIQDELMESISNGSVAWNVVELVYSFILAVLCVISVWLSFSFANR SLYGTSAGYIASGLFFIVQTIFYVVPCTVIYREVQASSEAERQNIVIEPAHPFRSNAY QDL" gene <120561..>121446 /locus_tag="CRE_04029" /db_xref="WormBase:WBGene00057610" mRNA join(<120561..120795,121271..>121446) /locus_tag="CRE_04029" /product="hypothetical protein" /db_xref="WormBase:CRE04029" /db_xref="WormBase:WBGene00057610" CDS join(120561..120795,121271..121446) /locus_tag="CRE_04029" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05183.1" /db_xref="WormBase:CRE04029" /db_xref="WormBase:WBGene00057610" /translation="MIILFLYNQTFFILKKNYSFKPLYFLAPIKLTVYRSYNFSHSMS DIANSGTFLQASSPIDSALFFVFAAFILNVIVVIIAFCYFDPAPHEPALVYRTYHTLR RLSRRNAEARIRMSIKSEEQEEESNDSPAQVLFV" gene <122222..>124046 /locus_tag="CRE_04030" /db_xref="WormBase:WBGene00057611" mRNA join(<122222..122293,122598..122750,122799..122919, 122967..123076,123121..123249,123304..123458, 123941..>124046) /locus_tag="CRE_04030" /product="hypothetical protein" /db_xref="WormBase:CRE04030" /db_xref="WormBase:WBGene00057611" CDS join(122222..122293,122598..122750,122799..122919, 122967..123076,123121..123249,123304..123458, 123941..124046) /locus_tag="CRE_04030" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05127.1" /db_xref="WormBase:CRE04030" /db_xref="WormBase:WBGene00057611" /translation="MRSLLIVLIFSTFFATLETRILHRPRDFRCGRLIVFGDSLSDDG VEAEGESHGFLRNCNGKVWPEYVNAMLECDRYVNYAYSGAKSGIGNFYFDSFSGIQWQ INQFLSNNKFLSDDPLVILQTGGTIDFFGGDTNSTEVVENIQQTIQNITQTMSSGTLV ILSLLDVSNSPGVQAAEDSEILQERLGHLISETNRQLHHIVLDSDLGTRRLNPFLRVR LIDINTVALAAMQSLNTTEPFTHHSPDLIPQAIYKYAYHDLWNPSTIVHYHIAKEIVR NLQQF" gene <124444..>130853 /locus_tag="CRE_04031" /db_xref="WormBase:WBGene00057612" mRNA join(<124444..124488,124933..125155,125376..125463, 125585..125738,125841..126229,126276..126500, 126547..126778,126828..127229,127279..127604, 127652..127809,127856..128173,128223..128335, 128385..129654,129702..130252,130370..130418, 130483..130706,130755..>130853) /locus_tag="CRE_04031" /product="hypothetical protein" /db_xref="WormBase:CRE04031" /db_xref="WormBase:WBGene00057612" CDS join(124444..124488,124933..125155,125376..125463, 125585..125738,125841..126229,126276..126500, 126547..126778,126828..127229,127279..127604, 127652..127809,127856..128173,128223..128335, 128385..129654,129702..130252,130370..130418, 130483..130706,130755..130853) /locus_tag="CRE_04031" /note="contains similarity to Pfam domains PF05649 (Peptidase family M13) (2), PF01431 (Peptidase family M13) (2)contains similarity to Interpro domains IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR000718 (Peptidase M13, neprilysin), IPR008753 (Peptidase M13)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05213.1" /db_xref="InterPro:IPR000718" /db_xref="InterPro:IPR006025" /db_xref="InterPro:IPR008753" /db_xref="PFAM:PF01431" /db_xref="PFAM:PF05649" /db_xref="WormBase:CRE04031" /db_xref="WormBase:WBGene00057612" /translation="MAGMGSANIVHTILLVGGLVLTAGVLGVVIAILVNESNNNNVVN PGTNTIYNETLIYNSTLVFNSTNTVNNTNTYNQTVIQVQTVYVDSSKAVNVAPPKQIP SSNSKYQSYQQVVQLFKASVNLSADPCNDFYAYTCGNFKGDMSFDVSDNSNVNDMVSK LSDDAYISTAPLPVQQTRWYFDQCVSARQNWNTIVASGKVVTDAINKLGAGSTGFEQS TQFPFPMLDQNKDVTTYPGKFGLGYLVGSLTASGVDTFVSAGVDTNWKDPAGPEGFAY LIDQPSTFAPNTYYLKDWDALNAQLNDSITSTMLLLAQVQNKNLDLNILAKDVQDIIH LDYVLATNFSTDDTTRRQYDRSYNPNTLAQLRSLYHDDIFSWHMFLPLAVGTAEQVLD KLLNQATYNYYIVMEPAKINMLFEALNDQNKYGITPRAVVNYLYYRLVDSLSNFLPWP TTTTIARPFVKIQRQPVGRPRHVLPHERKYEIKQIDDISDAQYSCAAETIDQMQYANA RVFVDKIYPTADDRKNVREHVAKVASSIVIGFRSMIDQLNWMTSSTKKGAYNKIENLV KNIAYPDWITDDAMLTQYHVPMNFKQTDDYITMYFNAQDFNLYAQWDQLVQGPADRTG FNGPPGVTNAWYQPELNSITFPAGILKKPFYDFNWPASVNFGAMGVIAGHELTHGFDD QGVQWNGVGTLSGWMDDQSKVSFTNMAQCVVDEYSGFCPLDKATYGAAACIDGAQTQG ENIADNGGIHSAFRAYKNYVDLYGPDPVLPDDSFQYFNPDQLFFLSFAQVWCQLPYQD YQFLRQILVDVHSPSIYRVLGTIQNFPAFKTAFNCPASTYAPDKHCNVWVSDIDTTYG LPNVQTDLNVAPEAPITATNVDKMNAYQMAVNYYSKSVNTKIDPCSDFYGYACGTFNQ PVSFTTARAQNLIYMSQKLEDPAYQPTIQGCSALTKEKQLYTACVAATASSQTEDQLL ISNNYIQARVTALQGFLGTPFTLVAGGAATLPNAKQLGDALGYLSFEQGIDTLVSPLV DTYWPDNSKGYQMFIDQNTAYLSKTYYQPAAWKIEKPKYYNMAYGVIKRYAKEQNINL PDSFNDTLSKVLDYEQMIATKYSTDDDTRRQFGRSWNLVNVGDLGKTYSFLDWITYLG HAPSTVKDKVTNVNYQVSVMEIDRLTHFSADYATLDSNLLVNLLYVRLILGNAQYIPS YASAFKGMTEESVFLGLSRRKTIPNNIPPSSDIAANGPGCASVANNLMQFANGRVFID YMYPTPQDVTNIRASAGGIIKNVISSFQGMIDQLDWMSPDTKKKAYDKTVNIQQNIAF PDWIANDTQLSNYYNDLKLAPADNYYDILDKLTKFNIEIQFNQLNAAMTDRTDFLGQP GTVNAWYQPELNSITFPAGILVPPYFQPNWPPSINYGGMGLVAGHELTHGFDDQGVQW GPTGNLAGWMDDNSKTGFVNMAQCVINEYNNFCPLNATMYTPNCVKGSQTQGENIADN GGTKLRWKNKHQVFSSACYISIHAAFNAYKTHQALDGPDPRLPDRLFGQFTHDQLFFM SFAQVWCEVRRTDEALYTQIMVDPHSPSMYRVFGTIQNFPAFQTAFNCPLGSNSAPTN HCEVWVPGKYQ" gene <131622..>133095 /gene="Cre-sre-45" /locus_tag="CRE_04032" /db_xref="WormBase:WBGene00057613" mRNA join(<131622..131916,132125..132465,132572..132828, 132879..>133095) /gene="Cre-sre-45" /locus_tag="CRE_04032" /product="CRE-SRE-45 protein" /db_xref="WormBase:WBGene00057613" CDS join(131622..131916,132125..132465,132572..132828, 132879..133095) /gene="Cre-sre-45" /locus_tag="CRE_04032" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor; contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)" /codon_start=1 /product="CRE-SRE-45 protein" /protein_id="EFP05195.1" /db_xref="InterPro:IPR004151" /db_xref="PFAM:PF03125" /db_xref="WormBase:CRE04032" /db_xref="WormBase:WBGene00057613" /translation="MIFLIGNNTRNYSVCYPIFIIEDNRSLEFPFSMLLFFELFLTFV SFYFVIKGVYVAARIRSFHRNLTALLIIYLLQWFEGLISNLLIKPYEIGYWPLGEYSE PIKQWWTDDQSRMTKLTDMRESPYFFIGGFIKWHYILSLITTLLFVSIERSFACYFLN DYEKKSRNLFFFLLIFGQFSMNMVAAFLFFFNAAHFAVGLAYILSANLIAMGIFSYVK NVNNQVTKAIEDFSNPSVYCLPARFQARENMRCFQMISRVIIAALCIIFTGCFVNLIM YLEFTPSIDPLLNLIFECAINLNPVIICPTLMGSVDAWRKFSFSNGFCKRIQMKMRRR RVTKVSSTDGGCSSKHDKTKKETDAYFDQLNSAWI" gene complement(<133260..>136517) /locus_tag="CRE_04084" /db_xref="WormBase:WBGene00057614" mRNA complement(join(<133260..133439,133497..133794, 133838..135162,135213..135999,136047..136270, 136320..>136517)) /locus_tag="CRE_04084" /product="hypothetical protein" /db_xref="WormBase:CRE04084" /db_xref="WormBase:WBGene00057614" CDS complement(join(133260..133439,133497..133794, 133838..135162,135213..135999,136047..136270, 136320..136517)) /locus_tag="CRE_04084" /note="contains similarity to Pfam domains PF02194 (PXA domain), PF00787 (PX domain), PF00615 (Regulator of G protein signaling domain), PF08628 (Sorting nexin C terminal); contains similarity to Interpro domains IPR013996 (PX-associated, sorting nexin 13), IPR001683 (Phox-like), IPR013937 (Sorting nexin, C-terminal), IPR000342 (Regulator of G protein signalling), IPR003114 (PX-associated); coded for by the following C. remanei cDNAs: DY527511" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05141.1" /db_xref="InterPro:IPR000342" /db_xref="InterPro:IPR001683" /db_xref="InterPro:IPR003114" /db_xref="InterPro:IPR013937" /db_xref="InterPro:IPR013996" /db_xref="PFAM:PF00615" /db_xref="PFAM:PF00787" /db_xref="PFAM:PF02194" /db_xref="PFAM:PF08628" /db_xref="WormBase:CRE04084" /db_xref="WormBase:WBGene00057614" /translation="MSDTNDFQHQQRIHVAAAVVLLTAIFYAAGFGFGSIFLVVGSLI GGVLFARWIFECSNGELLFQWKDYFNATAAPVDLNSEEDDAKTDTAKTRQMPWQDLTL PASLNEAVESLLCEIVEQYVNGWYGGAISRDRAFINEIKYQLRYASANLVRCIRRVDL SRFVADEALPIASFHVSRLTELELKLRTSNGPPRSLLESKIAEQLDDIHVALSGREEE TAYVRQIADFLIPRLLDETRLAGRAHDDDSPLRLFGRGKNERPWPSKSMRGFLREMLT NAVLLPVFDMLTQPDTINYWLILLFDEDRNVEMIEENIDVSKNNLLTATNYHFQTTPI PLLKGLCDDSSSSSDNIPDSLLQLKLTEVLRDARLYSIFRMYLQDIRGPVHELQFLVE ATRILESIQRKSESSSQIAYDIWQLYGQFVHESSQERVRLNEKLVEQYKSAVEMNDLS VLEEIIELVSHTFSIQTTIDQTVFKSYQEVYNRTQSTHVVSFCQSECFLGYLCGSPPV TINELIDQQDRQRVAAPVERTFSLSQLRARVRKALTSVGDEEKEEIGGESGGGVETPE SQGGSSSSSYVNIAVPSIDVISADGNIEEGVEEPETPVPIPTNPGLVMDPEPIDLNCW KVNVSQVSGLRDRITDRTIFVFIIEVERPDAKPHETQRWSIHRSFNEFYVLESKLNEF HGDSLRFSPLPTRKTFVTRDKPYMEQHRLIFSTFISTLSKQRLLNRSELLLAFLSSNE EFRDTLSLGDLNPWKVVKKTLPGKLVGREKGQNLKPYLLKALAQTLAPADRVEEKSDN SLEDVTPTNSGASLATNAVYSSIYGNNFDNVFKETYKNSDEIQLWTTSAYDSILLLFW KPLKCQFEWLTPIFTAIRSLCSKTIDSVIRSILANVFQKSLSVANMTYLIQHVQWSLF CNDAPWPTEQEMKMREELAMRRTLEYFQNNIPIHAQRLIGRDDIKTLISRIIDGLQYP RLNKQLLYVLIDRLLLQVFPELDELGQHPLQ" gene complement(<136735..>139962) /locus_tag="CRE_04085" /db_xref="WormBase:WBGene00057615" mRNA complement(join(<136735..136942,136988..137820, 137867..138161,138210..138312,138360..138789, 138839..139471,139483..139706,139752..>139962)) /locus_tag="CRE_04085" /product="hypothetical protein" /db_xref="WormBase:CRE04085" /db_xref="WormBase:WBGene00057615" CDS complement(join(136735..136942,136988..137820, 137867..138161,138210..138312,138360..138789, 138839..139471,139483..139706,139752..139962)) /locus_tag="CRE_04085" /note="contains similarity to Pfam domain PF08510 PIG-P; contains similarity to Interpro domain IPR013717 (PIG-P)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05202.1" /db_xref="InterPro:IPR013717" /db_xref="PFAM:PF08510" /db_xref="WormBase:CRE04085" /db_xref="WormBase:WBGene00057615" /translation="MSSSQVVSNSSATPKSKLKQNPPLPSEEIHLPGPHPARGIYGFA LYIVSWCLLVIYLIWAITPVPILYRLGITYIPSKLWALFIGIFFPSAACLYVTTIFLV NCWNFRGYAIFDNVQEVKNDFGERSKSNSIDSINEKPEKKSIEKSKEMLKCLNPNSFW VLTRSFSTRREIQKTLNDVKKLGINRSAQVGEIHKRWSAFEREQMNMASENKKPINER YSTESMLGEKMLSLDPSYQKIVEKRTPKSVTSPEPSSEHPITFPLKSMNINTISSSSS STDIFSNGNGVGTSSDGDRGFYVEADVFVDEYVAGSSLDLDPGDRMVATREYYGSDDA VERISFQKPGQRMAGVEENEQKGSSNTFDNIDDPEISTMTGTIVEDMPASSTKCTGCG ANFHCKDSSLPGFVPLEILEKIDRKTIFHHKNENPPQSLCKRCHLLQEHNFLLNVNVC DVDYSRMMSELRKQPESLVVLVVDVTDLPGSIYPKLAQVVGSRRPMIVVGNKVDLLPP DAKTGYMYRFKKTVERAVEKAGLLEHFNILHTALVSAKTGHGIEELITEIYLKYTNVR LGMRGDIFLVGCTNAGKSYVAVFLRKDVDNFIYRTMFNALLQSDLCKVRAVDLVDRAT TSIWPGTTISLLKFPVMKPGPYRLEMRRRRLLTHRAWNKKEMYARKLLLAETGDDRYA IPTSVIQNTYKDSEEELQPMALKELQGGEEDEDDVQRRNEERSKYSLDDPIFAKGKWC YDTPGTVNQNQVNYIDRIPRLINVFLQVLSLFTLDELVNVTPRRVLKPRTAIVKAGES LLIGGVGRIDVESIAGYANVLLTTFANDQLPLNVMPTHEVEEFYRKWLGTPSLVVPQG DITRMASWPEFKDDNNEIGRRFEMKGRKDEGCCDIVLSSIGWVMVTSEKDVVLSAFSP ANKGLTARIQPILPYSASLRGKRLPGSQFYKVQPIEFPVNVRRKRAEARKREEKKRER ENSHNL" gene complement(<140311..>141974) /gene="Cre-ddl-2" /locus_tag="CRE_04086" /db_xref="WormBase:WBGene00057616" mRNA complement(join(<140311..141014,141058..141682, 141728..141844,141888..>141974)) /gene="Cre-ddl-2" /locus_tag="CRE_04086" /product="CRE-DDL-2 protein" /db_xref="WormBase:WBGene00057616" CDS complement(join(140311..141014,141058..141682, 141728..141844,141888..141974)) /gene="Cre-ddl-2" /locus_tag="CRE_04086" /note="contains similarity to Interpro domain IPR003124 (Actin-binding WH2); coded for by the following C. remanei cDNAs: DY524818, DY524726, DY529453" /codon_start=1 /product="CRE-DDL-2 protein" /protein_id="EFP05138.1" /db_xref="InterPro:IPR003124" /db_xref="WormBase:CRE04086" /db_xref="WormBase:WBGene00057616" /translation="MYHVPLVPRDTGREETVFRIDQSLKKLMKVSDDVFNKVEERIVR LHQKAEKIDKRTELLEKKLEQLQGSDNVITFVLPRQLPKVPISEESPSASLFQINVDS ENLADSNHLPVFRRADDHILRPCEPIDFTFELKKADKFFLTSQVMREYDQKGWERYKK RLTSGLRDLPLFRDDMNIAELFYAGTSIPAFVGVTGDFSQRHLDADDGTSTRRSGRNE EILNSRLHEQLLEDTALSNRLMADDTVDDDHPLAFRIEQNVNDRKSMVDLPDSLPNLK GHAHDFTLRDLGIDEDLLPDLTDDSSSLLALDIQTSQFSPQPTSVSEPPTLPISPPET LVVELPPVATVIMVPPTVSIPPPPPPPPPPPPPPPPPPSAVPQTPDAFTQSTASSVTF SPTKSVDGGRSDLMAAIRAAGGASNAKLSKITERQVKRKGKFDGILESSALGGKGSTG TPGAVRTPPGGGDLMSALSKALDARRKAINGQNDRSSTSSSHVATNSVPAPPHFSDDE WN" gene complement(<142201..>146096) /locus_tag="CRE_04087" /db_xref="WormBase:WBGene00057617" mRNA complement(join(<142201..142331,142377..142491, 142549..142739,142785..142969,143017..143194, 143445..143659,143742..144187,144231..145019, 145069..145257,145422..145516,145726..146001, 146048..>146096)) /locus_tag="CRE_04087" /product="hypothetical protein" /db_xref="WormBase:CRE04087" /db_xref="WormBase:WBGene00057617" CDS complement(join(142201..142331,142377..142491, 142549..142739,142785..142969,143017..143194, 143445..143659,143742..144187,144231..145019, 145069..145257,145422..145516,145726..146001, 146048..146096)) /locus_tag="CRE_04087" /note="contains similarity to Pfam domain PF00432 Prenyltransferase and squalene oxidase repeat; contains similarity to Interpro domain IPR001330 (Prenyltransferase/squalene oxidase); coded for by the following C. remanei cDNAs: DY529176, DR781991" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05218.1" /db_xref="InterPro:IPR001330" /db_xref="PFAM:PF00432" /db_xref="WormBase:CRE04087" /db_xref="WormBase:WBGene00057617" /translation="MCDISTEDQLLDIAKNAAELDKPLKFEYKQHIGFLIRHLNVFPQ PYNTLETSRQVLDLSYENKFPIFRNTIFLFAISALDVLGELDNLLTPERRQAFIDWIY DLQLTNAWIWWLDRRSQLSKSRWQHSMDSSIQFETFLEANDFHRLPGHLPFRTNEFEV YNRNLLATRYFDKIETNSDVGLLKIWTVNERSKRRLLECFSVEICSDGIPIIETLKST PGYKLNMIPPVKNEARPPKAKEPLLELKTSNWSSDTFTRLFLRSPTLLQMVHLPEGNS QDEGDTILRKNIPIFHSAVKSYAESHLLEGPLGVVDYGGRVWIHDYLSESIDKPEKLN ANEQEIYQFVTFCDHPKMITVAGNFHVETVDMRSSGRSRACTELWRSPIFEARSRHEA MYVQGVPPASAVIRHISRISGTANNYLVMTDRALHLIDDRFPGKTVLSVEHPFSSGTH RLIVSDRMRDAAGGGDVYSIFSLDQFQVLNSSIAMTKLYSHPSGIWSSVDAFHFIGEP KHFNQTTHRGKYAEPGFISEPTRAMSLIENEELHASILLRQTDDGAIWWQQFSKRNLS MKEKVEEEKRSFKRINERRNESTWKRENYNPVYSDKLSQELRETPNDIRQVISVGSPS VDSRVISKFYQRAVNLQRQSNRLIVTNPSRQLEVAPLDDVNSVLSKITLDTWAAVEKM MNENRSVCGFRGSHSCENSDYDEANLAQTYSALLSLAILGDDLKRVDRQAILKTVKNA QRDNGCFWSQGVGSESDMRFVFCAVAICKILDGEKEEVINWVKLSEFLKSSLNIDGGI GQAPGDESHGGSTFCAIASLALSNRLWTGEVLTRRDIDRLIRWAIQKQEIGFHGRAHK PDDSCYAFWIGATLKILNAYHLISPTHLREFLMISQHPHIGGFCKYPEPGGYSDILHT YFSIAALSLLGEPALNPVHPSLNVSMRAADHISRLRFE" gene complement(<146309..>147986) /locus_tag="CRE_04088" /db_xref="WormBase:WBGene00057618" mRNA complement(join(<146309..146433,146479..146599, 146670..146763,146808..146990,147021..147179, 147229..147306,147356..147483,147529..147708, 147759..>147986)) /locus_tag="CRE_04088" /product="hypothetical protein" /db_xref="WormBase:CRE04088" /db_xref="WormBase:WBGene00057618" CDS complement(join(146309..146433,146479..146599, 146670..146763,146808..146990,147021..147179, 147229..147306,147356..147483,147529..147708, 147759..147986)) /locus_tag="CRE_04088" /note="contains similarity to Brugia malayi Novel immunogenic protein NIP-2, putative.; TR:A8PAI3; coded for by the following C. remanei cDNAs: DY529383" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05241.1" /db_xref="WormBase:CRE04088" /db_xref="WormBase:WBGene00057618" /translation="MVFRKYRAVKQWGKMDTRIFKEIYNSRNKRKMPAFEVPEAVKAL GVPVFDSNEIFTLSNRKNLVEQAREQVESEIRFTEEQHPLQKNHPAYIFEGVEPMSDG IAQAALLTRSVVRNGLPDTILHNSAAKLEIDEEMVRDAILHGERYNPTLQKLPARFDP VMFWVRHIRLHGTPVVKRNNIILNNLLRHVILGGRRTQTLEHSLQVNRDAPLSVYLSG GQYFSKTPLVLRAQPHLTVQSPDSIVTMPWAGPIDIETARFNSFYYSTEPLPDIYPIS PIIDFETDTLYNDDLLLNRSQQQTHVHSLLWSREQDQKYPWTSEQNMANAILTTYAAA VAEATRNGTTELKKPVLVRGVQLVNGRLDLVAMQLNTLKLTEQGENTEKNIVWIEKGL RLYKPKPYYEQMEVVEKLDMNVFHKFVALMLGFGAPHVH" gene <148754..>151348 /locus_tag="CRE_04033" /db_xref="WormBase:WBGene00057619" mRNA join(<148754..148781,148831..148931,148977..149140, 149190..149523,149568..149747,149793..150010, 150055..150191,150242..150635,150685..>151348) /locus_tag="CRE_04033" /product="hypothetical protein" /db_xref="WormBase:CRE04033" /db_xref="WormBase:WBGene00057619" CDS join(148754..148781,148831..148931,148977..149140, 149190..149523,149568..149747,149793..150010, 150055..150191,150242..150635,150685..151348) /locus_tag="CRE_04033" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type); coded for by the following C. remanei cDNAs: DR777369, DR781646" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05114.1" /db_xref="InterPro:IPR007087" /db_xref="WormBase:CRE04033" /db_xref="WormBase:WBGene00057619" /translation="MSLQGIEDIGAYPVADDSGDLLDPNMIPTAATEVVMSGDGIERR FAEGGDDEDTYQYEYAYEDDNDEQQHHHPHLEIGEEEVVVTEEADYSQHWKEEKKMNL YDVLDGKMYMEDPKTEKRSRLDDQAFTSVYQHGTPGSRGTPSDYPYPVEEYREYSVYS NQKSNVSGDRTCQGCGMTLRRSVFYHHARMIREKGACNLFTPQRFPCTQCDARIGTLE KLCQHMEQIHQAPTQIKTISFTNEEDFKQFRIELEGKGGNFRMARGNKKNKKGVVQYF RCNRLQTLSRSQTFRPVDNPALDDLPSNRKRGRLHQQELRAQSAKQVIRTENSCTAFY NKAYLDNGTIEVRFCDHHLHDDEKLRLPEAVRMRVIELARKNLPHVVILMIVKDERFK YCERNSANDRRIQDMKTQDIRQVLAGNNRSEKSKAPIFFTHCSNSKASARLSRGEVPR DISYDRSMNAMPLAEDDPLRPWTDVRPAAKIDRCSLSHSELRYLDLFDSNREEIMAKL NERTRIEQDKKSLFDSFIHRLSSSQEVIKHLHYRQLDPSESTLMKLKKAHIYLQKIEE HLLNPRREQSNPVRVTSYIRMMEEEARNVERSRQSGAIPGVGGINADDIDVVGIDDEE YHHHMNLHDVVGEEEVGYMDDQEDGEDMELRRAIEEVEEDDYPIVEEEVMDHNVEEVE SEVVVEEVVEESIAHEEEVEIDNVEEVRHEDEDVDEDTEPTVTRAGRVVKKKSQFDA" gene complement(<152003..>153515) /locus_tag="CRE_04089" /db_xref="WormBase:WBGene00057620" mRNA complement(join(<152003..152228,152276..152902, 153010..153372,153430..>153515)) /locus_tag="CRE_04089" /product="hypothetical protein" /db_xref="WormBase:CRE04089" /db_xref="WormBase:WBGene00057620" CDS complement(join(152003..152228,152276..152902, 153010..153372,153430..153515)) /locus_tag="CRE_04089" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05171.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE04089" /db_xref="WormBase:WBGene00057620" /translation="MSTLSKFPIYSLPIIVIRKVLKYMSLFELVSLSLCSCSSKKICK SVWTSIQCQTARHYYDFICLKRPYIFLRLDFYPFQKWKFNFDKLPKSKKKKNETSGYF STISRNYISKKDKCESPTQKEGNCSDQLYFSSWTPDEQSFNKKYVTIGDFPPLRVFTM KIWSRSGKLFHDIKMWILYLSDLFNIQLYTISLGLDQLNSSDIQEIADLYTPRNEKET GIERMMLFKYNKKFQAEKKLIHSALRRINVTHELEIYLNPSSKFRFDFKNRQSKPMVL HLEYSKVIDINQVIEMDFQSIRLLRSKLKNYDFKLLIEKWRDGWTPKWTRLMIEFNEM LDIDSYIVGAVTEITDYRDRSVIDRNTPIHSYKFQDKQEYSFGTLIKNGYHIVRFDES VATVTVENNRIGWFDIQSNSSLSRFKALGLHPRTFYVSNDI" gene <154541..>155947 /locus_tag="CRE_04034" /db_xref="WormBase:WBGene00057621" mRNA join(<154541..154978,155026..155105,155119..155448, 155549..155705,155753..>155947) /locus_tag="CRE_04034" /product="hypothetical protein" /db_xref="WormBase:CRE04034" /db_xref="WormBase:WBGene00057621" CDS join(154541..154978,155026..155105,155119..155448, 155549..155705,155753..155947) /locus_tag="CRE_04034" /note="contains similarity to Pfam domain PF03407 Protein of unknown function (DUF271); contains similarity to Interpro domain IPR005069 (Protein of unknown function DUF271)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05111.1" /db_xref="InterPro:IPR005069" /db_xref="PFAM:PF03407" /db_xref="WormBase:CRE04034" /db_xref="WormBase:WBGene00057621" /translation="MEKSLNRNIIWNALDIILFNRLSLILFYSFWFLVGILALRKSQN ALSAVQYVKSNSDSVSLNSIESSSEFEKLIAVLDEKYPRPPAFFLLNQYALNMTDNFL CNTGTLEGAHERFVFVTLDEIARDSISRRWPNIQVFHWPTPSLYKPFSFAEGAYQTIY LLRSNLALALIKNCSWKTFITFRGKSFWMMQQDTFWRKSIFDLNYEDDMSYDAIFDQL GDGDDSLRKEWVNGANWFIRANDATQFFFERLSEKLAHWYTPDVGIMIHQCNTWDKPK CAYIPYNVTYSWEWMFSDQSNPPYLLQLDCETNGGTKLMQLGRYGFHFVNPDGTCNND KIASAKSRMENGTVEVQMTKTLPSWGRLQFKLYWYITEYLLWIPILGEYMRPYLVLTG FILMITI" gene complement(<158502..>159775) /gene="Cre-clec-145" /locus_tag="CRE_04090" /db_xref="WormBase:WBGene00057622" mRNA complement(join(<158502..158795,158837..159097, 159143..159619,159719..>159775)) /gene="Cre-clec-145" /locus_tag="CRE_04090" /product="CRE-CLEC-145 protein" /db_xref="WormBase:WBGene00057622" CDS complement(join(158502..158795,158837..159097, 159143..159619,159719..159775)) /gene="Cre-clec-145" /locus_tag="CRE_04090" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain; contains similarity to Interpro domains IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)" /codon_start=1 /product="CRE-CLEC-145 protein" /protein_id="EFP05158.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00059" /db_xref="WormBase:CRE04090" /db_xref="WormBase:WBGene00057622" /translation="MNLKYSILFCFFLALWITQIETRKVTQKPKPPPPPPPPPKKDIS WVRSKIDSAKEKYEAGKQKIKSKFSFGSKSDDTKPKETFAQKTTSRKPDLHLKTTKKY GWNSNVQANYAVPNTMFTTKKPLFDRVKEKVKGSEKYVGKAVGWAKKDLGIGVEGPKK PSKILTYGKKAAEYVFKKKSKKTAIAAYSTGRSNSNDYSRDFGNSGSYSGGGNSEVSS DLHQKVEYLKNRLEIMQNTIKGTWNTSEAGTKYKLFEEKKTWNDAQVLHCEELGSNLA YLDSESKNNFAKLLLHSQNITMVWFGLRTEIGTESVSPSQDQFSNFSHLDGCGVVDSN GTWSISSCSMELPYLCQAFRFDVLVEIP" gene complement(<159966..>161726) /gene="Cre-clec-146" /locus_tag="CRE_04091" /db_xref="WormBase:WBGene00057623" mRNA complement(join(<159966..160180,160303..160606, 161673..>161726)) /gene="Cre-clec-146" /locus_tag="CRE_04091" /product="CRE-CLEC-146 protein" /db_xref="WormBase:WBGene00057623" CDS complement(join(159966..160180,160303..160606, 161673..161726)) /gene="Cre-clec-146" /locus_tag="CRE_04091" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain; contains similarity to Interpro domains IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)" /codon_start=1 /product="CRE-CLEC-146 protein" /protein_id="EFP05227.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00059" /db_xref="WormBase:CRE04091" /db_xref="WormBase:WBGene00057623" /translation="MRSIFVVLLLAAVVQTQFNFHGMSRSFFSTDEEFPTQLQNFEGR TQTEIRTLKEKVEKLEKLIEGLQSILMKEWNQTESGSKYRLFEERKNWDNAEKHCQGF GAHLAIIDNEAKNTFVTNLINSSETSDFAWIGMKTKTTTQTSTPFTNFDSESPIDGCA VMDSKGVWAIRSCIQLRPFVCQIIRNDVNI" gene <163115..>165973 /locus_tag="CRE_04035" /db_xref="WormBase:WBGene00057624" mRNA join(<163115..163169,163423..163612,163658..163795, 163809..164132,164193..164451,164536..164784, 164825..165364,165416..>165973) /locus_tag="CRE_04035" /product="hypothetical protein" /db_xref="WormBase:CRE04035" /db_xref="WormBase:WBGene00057624" CDS join(163115..163169,163423..163612,163658..163795, 163809..164132,164193..164451,164536..164784, 164825..165364,165416..165973) /locus_tag="CRE_04035" /note="contains similarity to Pfam domain PF04870 Protein of unknown function, DUF644; contains similarity to Interpro domain IPR006954 (Protein of unknown function DUF644)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05209.1" /db_xref="InterPro:IPR006954" /db_xref="PFAM:PF04870" /db_xref="WormBase:CRE04035" /db_xref="WormBase:WBGene00057624" /translation="MSSSYGLLTFILILSCLAVAYGELKLEKELKVALDTKDVEASPY YKDKVLSLPITKEAGTELWQHWTDQAFSGLISAIATRRLNLVEKYDKKKHEKCSSEAH DITSHAKCLVALEGDGLTNRLLKRKKVCSQISFWSTIRITEKRKTIEKMSKKSLKSNE KLKKLRSMESYEASKSAEHKNKRRRRILKKSSENSGISNELSENDWVGSFKTVKRAKR SIKVKNADSYILKTEYDKSPFATITKHLTKTVKIFNKKDKLSKWQDIIERIQKKGDMM KKRKQVENLQRKRMQVFQNAKRIRSSEDSLLEMRKRRKNNEDGSILNFANLEKHIDDE ELKEMFHQKVSNMTEEEKMMMIPIDLIRQATKIGLGLSGHNTTDMDTKTIKLISPRFM SVLPEDEEARKNEVDVLSPSLFSLHDSGSDLEKKTSFKSIFGMADKVGMTAEDSQNFL DLLVEATGVAEAVEEAEEKLTDALRKKDDAMGRGPDGQPLYFTKENITERFPAEAKKI ELFEKLDKTYSIEQLKDMNQTGYTVLNPKQMQMIYGKKSPFKNPRLLKTFNNMTRAEI QRSIHSTIKDVADKKLKFEVRQKDIVLSPIVNTAIINNPALASQALILSPAVMVPLIQ SPAIFGTVVLSPWLFVPVILSPRILSPVILDPFMFVPIVLSPLALVPVVLSPGVFNPF VLSPLLLCPFILSPQVMTPLILSPFALTPLILNPLLMSPLVLSPFVLSPQVLSPQFLT GIILSPYALSPAIESNGKLVTVFASPSWLS" gene <166776..>169532 /locus_tag="CRE_04036" /db_xref="WormBase:WBGene00057625" mRNA join(<166776..166827,167000..167189,167235..167386, 167430..167703,167762..168011,168097..168345, 168386..168925,168975..>169532) /locus_tag="CRE_04036" /product="hypothetical protein" /db_xref="WormBase:CRE04036" /db_xref="WormBase:WBGene00057625" CDS join(166776..166827,167000..167189,167235..167386, 167430..167703,167762..168011,168097..168345, 168386..168925,168975..169532) /locus_tag="CRE_04036" /note="contains similarity to Pfam domain PF04870 Protein of unknown function, DUF644; contains similarity to Interpro domain IPR006954 (Protein of unknown function DUF644)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05118.1" /db_xref="InterPro:IPR006954" /db_xref="PFAM:PF04870" /db_xref="WormBase:CRE04036" /db_xref="WormBase:WBGene00057625" /translation="MEKIATLWTLLAFLCVPEIIADMQFQKELQVVLDTKDVKASPYY KDKVLSLPITKEAGTELWQHWTDQAFSGLISAIATRRLNLVEKYDKKKHEKCSSEAHD ITSHAKCLVALEGDGLTNRLLKRKKYFHQKKRKTIEKMSKKSLKSNEKLKKLRSMESY EASKSAEHKNKRRRRILKKSSENYGISNELSENDWIGSFKTLRRAKRSVKTVDNYSLK TSYDKSPFATITKTLSNYVKVFKKKEKISKWQEIIERIQKKGDMMKKRKQMENLQKKR IQVFQKATIGSSDDSSFEMRKIRQQNGKSSNFANLEEEIEDEELKKMFHQKVSNMTEE EKMMMIPIDLIRQATKIGLGLSGHNTTDMDTKTIKLISPRFMSVLPEDEEARKNEVDV LSPSLFSLHDSGSDLEKKTSFKSIFGMADKVGMTAEDSQNFLDLLVEATGVAEAVEEA EDKLTDALRKKDDAMGRGPDGQPLYFTKENITERFPAEAKKIELFEKLDKTYSIEQLK DMNQTGYTVLNPKQMQMIYGKKSPFKNPRLLKTFNNMTRAEIQRSIHSTIKDVADEKL KFEVRQKDIVLSPIVATPIINNPVLTSQPLILSPAVMVPLIQSPAVFGAVILSPWLFV PVILSPRILSPVVLTPFVFAPIVLSPLALVPVILSPGIFNPFILSPLVLCPFILSPQV MTPLILSPFALTPLILTPLALSPIVLSPFVLSPQVLSPQFVTGIILSPYALSPAVEST GKMVTVFASPSWLS" gene <170479..>173190 /gene="Cre-mltn-5" /locus_tag="CRE_04037" /db_xref="WormBase:WBGene00057626" mRNA join(<170479..170837,170883..171034,171085..171325, 171460..171712,171758..172006,172047..172586, 172633..>173190) /gene="Cre-mltn-5" /locus_tag="CRE_04037" /product="CRE-MLTN-5 protein" /db_xref="WormBase:WBGene00057626" CDS join(170479..170837,170883..171034,171085..171325, 171460..171712,171758..172006,172047..172586, 172633..173190) /gene="Cre-mltn-5" /locus_tag="CRE_04037" /note="contains similarity to Pfam domain PF04870 Protein of unknown function, DUF644; contains similarity to Interpro domain IPR006954 (Protein of unknown function DUF644)" /codon_start=1 /product="CRE-MLTN-5 protein" /protein_id="EFP05188.1" /db_xref="InterPro:IPR006954" /db_xref="PFAM:PF04870" /db_xref="WormBase:CRE04037" /db_xref="WormBase:WBGene00057626" /translation="MIQPDEESSKSSKMKGGTKVAALPLSYHFRSLYNRVQKISLDPE TNRLLIYPFYFSEIQGNSKLEKELKVNIDTKNVKSSPYYKDKVLTLPISKKSRTELWQ HWTDQAFSGLISAIATRRLNLVEKYDKKKHEKCSSEAHDITSHAKCLLVLEGDGLKNL LLKRKKYFDKIARNSSSSKSKRMQKYSRRLQSLESMKNYKASRFGGKMRKSESSVVAD EKSWIGSFKTLKRTKRSTIKNAESYVLKSDQDRSPFTVITKQLSETVRIIKRKEKLSK WQETIERIKANGESMKKRKNIESKQRKRMRVFQKTKSLQLSENNSPERKPEKTRGGLL MNTAKIEEEIEDEELKEMFHQKVSNMTEEEKMMMIPIDLIRQATKIGLGLSGHNTTDM DTKTIKLISPRFMSVLPEDEEARKNEVDVLSPSLFSLHDSGSDLETKTSFKSIFGMAD KVGMTAEDSQNFLDLLVEATGVAEAVEEAEDKLTNALRKKDDAMGRGPDGQPLYFTKE NITERFPAEAKKIELFEKLDKTYSIEQLKDMNQTGYTVLNPKQMQMIYGKKSPFKNPR LLKTFNNMTRAEIQRAIHSTIKDVAEEKLKFEVRQNDIVLSPVLNTALINDPKTASQA LILSPAVFVALINSPALFGSVILSPWLFVPLILSPRILSPVILDPFMFVPIILSPVAL DPVVLSPGIFNPFVLSPLVMCPFILSPQVMTPLILSPFALTPLILTPLALSPIILSPF VLSPQVLSPQYISGLFLSPYALSPAIESKGALFTVFASPSWLS" gene complement(<173336..>174203) /gene="Cre-hot-3" /locus_tag="CRE_04092" /db_xref="WormBase:WBGene00057627" mRNA complement(join(<173336..173501,173671..173779, 173831..173952,174001..>174203)) /gene="Cre-hot-3" /locus_tag="CRE_04092" /product="CRE-HOT-3 protein" /db_xref="WormBase:WBGene00057627" CDS complement(join(173336..173501,173671..173779, 173831..173952,174001..174203)) /gene="Cre-hot-3" /locus_tag="CRE_04092" /note="contains similarity to Pfam domain PF06579 Caenorhabditis elegans ly-6-related protein; contains similarity to Interpro domain IPR010558 (Caenorhabditis elegans ly-6-related)" /codon_start=1 /product="CRE-HOT-3 protein" /protein_id="EFP05206.1" /db_xref="InterPro:IPR010558" /db_xref="PFAM:PF06579" /db_xref="WormBase:CRE04092" /db_xref="WormBase:WBGene00057627" /translation="MSRPMTFLTIFTSSSKCYSLLFPILIILITSTSSTDSTAAGYRQ NSHNRCYSCMSEMYEGFLNKGMDRYFNRPRNFSSQCDGEMDITNMHTVPCRTICLTIQ QDLIVLGQPTGHRLYMRGCALTIARRGLNNHTLSMFDRYDICRDMSASDLFRHEQADS QRIRVCSCLGDRCNSAISTSNSQSLSILAILVLFSSFFV" gene complement(<180252..>181628) /locus_tag="CRE_04093" /db_xref="WormBase:WBGene00057628" mRNA complement(join(<180252..180353,180674..180834, 180880..181237,181283..181429,181485..>181628)) /locus_tag="CRE_04093" /product="hypothetical protein" /db_xref="WormBase:CRE04093" /db_xref="WormBase:WBGene00057628" CDS complement(join(180252..180353,180674..180834, 180880..181237,181283..181429,181485..181628)) /locus_tag="CRE_04093" /note="contains similarity to Pfam domain PF03607 Doublecortin; contains similarity to Interpro domain IPR003533 (Doublecortin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05135.1" /db_xref="InterPro:IPR003533" /db_xref="PFAM:PF03607" /db_xref="WormBase:CRE04093" /db_xref="WormBase:WBGene00057628" /translation="MSKQPKTFRSRSSDHVPVVPTMVSQSNAVGVKRIHVWRNADVFF QGIQVVVNTHRVPSIDVLLDVISSRIGLINGAKKLYTTGGTLIKDINKIKDGENYVAS SSHFTPAAYGGQQQQQVIKKKKKRSKTVQGRKTEHIELGEEISIPLNEPVEHEKKKKK KKVVKKKVRDHSPHHLDRATHHGSDETLAETAEVELPSEIEDSEEEEDERDHHHHRDK TPDHHRRPSTKASVGPSRSTSRRESRRDVHDHDEKKNEDGEKKNKDEKRRKSVIRRKS QSHHHGQQPNWGDLSSFTKNIDSLLRN" gene <182283..>183760 /gene="Cre-sre-44" /locus_tag="CRE_04038" /db_xref="WormBase:WBGene00057629" mRNA join(<182283..182577,182871..183208,183256..183512, 183559..>183760) /gene="Cre-sre-44" /locus_tag="CRE_04038" /product="CRE-SRE-44 protein" /db_xref="WormBase:WBGene00057629" CDS join(182283..182577,182871..183208,183256..183512, 183559..183760) /gene="Cre-sre-44" /locus_tag="CRE_04038" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor; contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)" /codon_start=1 /product="CRE-SRE-44 protein" /protein_id="EFP05240.1" /db_xref="InterPro:IPR004151" /db_xref="PFAM:PF03125" /db_xref="WormBase:CRE04038" /db_xref="WormBase:WBGene00057629" /translation="MIFLIGNSSNNFTVISPTTILHDHLLRSYPKNMYLFIYAILHLF IIFYVLKCAYICLKIRVFHWNLTCLIFSCSVQWFETLIGTLIILPYQTGYWTLGESNV TVQQGWTDNESEMVRVSDMYHLFFVGAFLKFHYILSMGLTGFILAVERTFACYFLTDY EKNPRVYLVVILIVGHQTFSLFSTFLHFFHILPNLFHMVILALIPNFLSSIIFAVTEN YNQKVTKTIENFANPNNYTLAARYQAKENVRCFAMIKKVIFAGIGMIIISCASATIVY LGILPEQETLFNFIFEASLNLGPLLIGPTLIYSVSSWRNYKIFKMPFSSKITTARKMT VKIVAPLERDVELKKETDTYFQQLKTSWM" gene complement(<183927..>186320) /gene="Cre-zip-3" /locus_tag="CRE_04094" /db_xref="WormBase:WBGene00057630" mRNA complement(join(<183927..184232,184286..184425, 184480..184693,184739..184926,186230..>186320)) /gene="Cre-zip-3" /locus_tag="CRE_04094" /product="CRE-ZIP-3 protein" /db_xref="WormBase:WBGene00057630" CDS complement(join(183927..184232,184286..184425, 184480..184693,184739..184926,186230..186320)) /gene="Cre-zip-3" /locus_tag="CRE_04094" /note="contains similarity to Pfam domain PF07716 Basic region leucine zipper; contains similarity to Interpro domains IPR011700 (Basic leucine zipper), IPR004827 (Basic-leucine zipper (bZIP) transcription factor)" /codon_start=1 /product="CRE-ZIP-3 protein" /protein_id="EFP05122.1" /db_xref="InterPro:IPR004827" /db_xref="InterPro:IPR011700" /db_xref="PFAM:PF07716" /db_xref="WormBase:CRE04094" /db_xref="WormBase:WBGene00057630" /translation="MQPSYDADDFMRRGFFGSLIGFRKRSASKPEPPLPPKFTPAPPQ QPTPSTHFQSSSSSVPTTVHHLTVPQNRTEYDIYQEIVSEAEYIERSSPATPDFSCPT TPQPSNYYTPLPLPQQHPHFDPSLRMPQHPEMMHHPSQYHMVMSPIAPHPIPVDTNGV PLGTQCPMAPPPYSSFAPQSSSGMQQQQQQTLPQMPHIPFDVKREIQEHLVLQNGKQQ MSIEDIVKLVVVALKDSQIEEGKEEEESPEEILRRKRIQNNLAAARYRKRQREARESA EQELGDLTKRNDELREQVSRMEREIDQLKQAVLARQ" gene complement(<189025..>190622) /locus_tag="CRE_04095" /db_xref="WormBase:WBGene00057631" mRNA complement(join(<189025..189262,189367..190184, 190277..190423,190470..>190622)) /locus_tag="CRE_04095" /product="hypothetical protein" /db_xref="WormBase:CRE04095" /db_xref="WormBase:WBGene00057631" CDS complement(join(189025..189262,189367..190184, 190277..190423,190470..190622)) /locus_tag="CRE_04095" /note="contains similarity to Pfam domain PF03607 Doublecortin; contains similarity to Interpro domain IPR003533 (Doublecortin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05193.1" /db_xref="InterPro:IPR003533" /db_xref="PFAM:PF03607" /db_xref="WormBase:CRE04095" /db_xref="WormBase:WBGene00057631" /translation="MPTPSTKKKVKKVAEDPLSSSGVSSLSGISAYNIRKISIYKNGD RYHRGVKFVINPRVVKDMEPLLNQINDRIELSHGAKKLYTTDGKVVGSIKELEDGKIY VAASAQFIPMRYGEFSEKVWKPPSRKHSPIMSSDRIKTARTRSQDPSRRRQPQNSGNA TGTTTQNSGSGVQRSRSVRTLAEDRKSRRDNSHDIRTNVNGSTVKKPAVPKFDQPRPK APVPKQSIPKPRKTLPASTTTAKKPPTPKRKISKKVLGAAAGVGVTVVGAAALGAVAA ASKKTKPATPKPKPIPTGVSVSSTTSSIMPVPNVESGAAEILEFPEEEKKIDVAMIHR SPTPPVVPSRSASAKSIKKPETPAADRSAKILEAKSVSQQPTPEESSEEEDEGHEDDE DVEDDEEEAGSDEVEEPSDEEEGDDDEEDEEEEEEEEGEEEDESRIGTPASRKSSSAV S" gene complement(<191605..>192402) /locus_tag="CRE_04096" /db_xref="WormBase:WBGene00057632" mRNA complement(join(<191605..191721,191775..191873, 191929..192037,192175..192268,192318..>192402)) /locus_tag="CRE_04096" /product="hypothetical protein" /db_xref="WormBase:CRE04096" /db_xref="WormBase:WBGene00057632" CDS complement(join(191605..191721,191775..191873, 191929..192037,192175..192268,192318..192402)) /locus_tag="CRE_04096" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05177.1" /db_xref="WormBase:CRE04096" /db_xref="WormBase:WBGene00057632" /translation="MPKYRLVFLLLFVILIDSEAADLLTCTSKEEPILVSGSINKEFS MQITEKVKNCNGYCVSKLVSLDATMADGNQAHIRNVHFSCVPIVPKAEQMCSKTCTTQ IYKDDKTSKSIDRSVGSLKRVLVKEIGDFSFEKAEEKTCCCKDAKCARRLDATMRLNL RSNYKIH" gene complement(<192634..>194018) /gene="Cre-sre-43" /locus_tag="CRE_04097" /db_xref="WormBase:WBGene00057633" mRNA complement(join(<192634..192841,192993..193454, 193503..193686,193733..>194018)) /gene="Cre-sre-43" /locus_tag="CRE_04097" /product="CRE-SRE-43 protein" /db_xref="WormBase:WBGene00057633" CDS complement(join(192634..192841,192993..193454, 193503..193686,193733..194018)) /gene="Cre-sre-43" /locus_tag="CRE_04097" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor; contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)" /codon_start=1 /product="CRE-SRE-43 protein" /protein_id="EFP05137.1" /db_xref="InterPro:IPR004151" /db_xref="PFAM:PF03125" /db_xref="WormBase:CRE04097" /db_xref="WormBase:WBGene00057633" /translation="MNLLLTDEIIIWLPIHEINNPAYINFNYLVFNIIYFILLLISAY FTWILVVTSWKIRKFHKNMTISFSFYFGTWYECWLGLVLVWPYKCGLIFVEDTHQKFS NFETTDQSIMARITNYPESTCLLFGSFLIWHYLASTVAGMCSFVIERAIASFFFSDYE KKERSYIGYTLLVTSQFCVIQGSILILFYFFSLKSALIIVIIMLSCVVLVSQLGTISL KIHKFQTFFFLLHYNTSLRNRLDIKQTNISYNLAARFQAAENARSLRLAIFVFAVICC IFTGAISMLGFWVLHLIPEYYEVAIMTAFECLVSLNPLFIVPAAMFSVPEWKIAFYKH IPFVNGRYHRRRRPDSEILDHELRVSMETNLYFVQLEDSWKNSNL" gene complement(<194644..>195833) /locus_tag="CRE_04098" /db_xref="WormBase:WBGene00057634" mRNA complement(join(<194644..194795,194929..195001, 195053..195571,195624..>195833)) /locus_tag="CRE_04098" /product="hypothetical protein" /db_xref="WormBase:CRE04098" /db_xref="WormBase:WBGene00057634" CDS complement(join(194644..194795,194929..195001, 195053..195571,195624..195833)) /locus_tag="CRE_04098" /note="contains similarity to Pfam domain PF00248 Aldo/keto reductase family; contains similarity to Interpro domain IPR001395 (Aldo/keto reductase); coded for by the following C. remanei cDNAs: DR409551, DY529298, DR782073, DR776849" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05222.1" /db_xref="InterPro:IPR001395" /db_xref="PFAM:PF00248" /db_xref="WormBase:CRE04098" /db_xref="WormBase:WBGene00057634" /translation="MSPPSLQLNSGHSIPTIGLGTWQSKPGEVSAAIKTAVAAGYRHI DCAHVYQNQKEVGEALKEIFEEGKVKREDLFITSKIWNTFHSEANAHENVNIILSDLQ LDYVDLMLIHWPQGYAENEGLFPAGENGKMKYSDIDYLETWKALEADQKAGKCRSIGL SNFTHKQIQRVWDAAEVKPSCLQIELHPYFTQVKLREFCKEKGIVVVGYSPLGNPGSA FFRKDGDPNVLTNEVVASIAKAHGKTPAQIILRWFVESGLSAIPKSVTPQRIAENFAV FDFKLTPGEVSQIDGLDKNWRIVDLSQRDGDHPHCPFLEEF" gene complement(<196600..>197816) /locus_tag="CRE_04099" /db_xref="WormBase:WBGene00057635" mRNA complement(join(<196600..196754,196909..196981, 197026..197550,197604..>197816)) /locus_tag="CRE_04099" /product="hypothetical protein" /db_xref="WormBase:CRE04099" /db_xref="WormBase:WBGene00057635" CDS complement(join(196600..196754,196909..196981, 197026..197550,197604..197816)) /locus_tag="CRE_04099" /note="contains similarity to Pfam domain PF00248 Aldo/keto reductase family; contains similarity to Interpro domain IPR001395 (Aldo/keto reductase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05149.1" /db_xref="InterPro:IPR001395" /db_xref="PFAM:PF00248" /db_xref="WormBase:CRE04099" /db_xref="WormBase:WBGene00057635" /translation="MKPVLTIQLNSGYEMPAIGYGTWQIAKSKTTDKVREALDAGYRH IDSAPSFRNQAEVGMAVKNWCSSGKSGREELFLSSKIWNTHHSREKCLQQIDEMLTDF DTNYMDLVVIHWPFGWAEDDAGGYLPRGNDGKFIASNVDYLETWKALEDAHRSGKIRS IGLANFNLEQVERIWTKGLIKPAVLQVEMNPFFTQKEVREYCREKGIALLATMTTGNP GSSCYRKHEDPNLLYNETLIAIAKSHGKTVPQTILRWIIDIGHTAVIKSVESKRIRQN INIFKFHLSTDQIERIEHLNLNFRILNPWLGNESHPHFPWPYVKE" gene complement(<198248..>198712) /gene="Cre-sre-48" /locus_tag="CRE_04100" /db_xref="WormBase:WBGene00057636" mRNA complement(<198248..>198712) /gene="Cre-sre-48" /locus_tag="CRE_04100" /product="CRE-SRE-48 protein" /db_xref="WormBase:WBGene00057636" CDS complement(198248..198712) /gene="Cre-sre-48" /locus_tag="CRE_04100" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor; contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)" /codon_start=1 /product="CRE-SRE-48 protein" /protein_id="EFP05210.1" /db_xref="InterPro:IPR004151" /db_xref="PFAM:PF03125" /db_xref="WormBase:CRE04100" /db_xref="WormBase:WBGene00057636" /translation="MLLSQNYNQKVTRIHEKYAHQSNYSLAARFQAKENIKCFKLIKK VLIAAFCIVVFGFSVAIVLFLNVSPQLDTLWNICILAVMSLPPLDICPAIINSVDSFR NYPFLPIEYFRVKLKIGRREVAIIPRKRSSAKSDDIRKETETYFNQLAASWT" gene complement(<198897..>199468) /gene="Cre-sre-46" /locus_tag="CRE_04101" /db_xref="WormBase:WBGene00084318" mRNA complement(join(<198897..199129,199174..>199468)) /gene="Cre-sre-46" /locus_tag="CRE_04101" /product="CRE-SRE-46 protein" /db_xref="WormBase:WBGene00084318" CDS complement(join(198897..199129,199174..199468)) /gene="Cre-sre-46" /locus_tag="CRE_04101" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor; contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)" /codon_start=1 /product="CRE-SRE-46 protein" /protein_id="EFP05226.1" /db_xref="InterPro:IPR004151" /db_xref="PFAM:PF03125" /db_xref="WormBase:CRE04101" /db_xref="WormBase:WBGene00084318" /translation="MLFLVGNSTNNIKLCFPIYILQEFKLLTFPWILLVIIELILYLL TLFFAVKCAFIIMKVRAFHKNLSSLALVLILQYAEPLIAKVISWPYETGFWTLKGSPN ISFSNTTIRQWWTEKETEMIQITDFSLNFYFFISGFLKLHYAISMSNILLVVAIERSL ACYFLNDYEKNHDSG" gene complement(<199875..>201103) /locus_tag="CRE_04102" /db_xref="WormBase:WBGene00057637" mRNA complement(join(<199875..200339,200383..200741, 200803..>201103)) /locus_tag="CRE_04102" /product="hypothetical protein" /db_xref="WormBase:CRE04102" /db_xref="WormBase:WBGene00057637" CDS complement(join(199875..200339,200383..200741, 200803..201103)) /locus_tag="CRE_04102" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor; contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05156.1" /db_xref="InterPro:IPR004151" /db_xref="PFAM:PF03125" /db_xref="WormBase:CRE04102" /db_xref="WormBase:WBGene00057637" /translation="MIFFFENLGKFKNVTICYPIYIIQNDELLTFPWFLLEVIEFSLY VFTVFYLLKVFYIAIKIRTFHKNLTTIFVFFVFQWYETFVANVLSWPYETGYWTLKGT MNENQTNVILKQWYTEKLNEMIPMSYHKSDIIFFLSGFLKMHSSLSMTTILLSISVER CFACYHLNDYEKKSRFWIALLIISVSHIYNFIIAFVFYFKLIPFECMIVCILAPNVIG FKLLFYTRYLNQKVTEAHEKFASHSNYTLAARFQAKENIKCFRMIQMVIICGMGILAL GISTAVLLFLNILPKFDTLFNGIIQGEMSFTPMIISISINYSVESFRKVKVFDWDSIW EKLRVSRRKVALVRKDSSVKIEMIRKETETYFNQLANSWI" gene complement(<201396..>201782) /locus_tag="CRE_04103" /db_xref="WormBase:WBGene00084316" mRNA complement(join(<201396..201585,201658..>201782)) /locus_tag="CRE_04103" /product="hypothetical protein" /db_xref="WormBase:CRE04103" /db_xref="WormBase:WBGene00084316" CDS complement(join(201396..201585,201658..201782)) /locus_tag="CRE_04103" /note="contains similarity to Pfam domain PF01549 ShK domain-like; contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05203.1" /db_xref="InterPro:IPR003582" /db_xref="PFAM:PF01549" /db_xref="WormBase:CRE04103" /db_xref="WormBase:WBGene00084316" /translation="MKFIVLFFLVIVAVFAKPQNPFARTFQKSNQLADDCKDIGTNCL NWARNGFCTNCNWTCEQRRHYCERTCGFCHPDYKCNETCPTFPPMKSGLLTEKEIRKL DQ" gene complement(<202251..>202791) /locus_tag="CRE_04104" /db_xref="WormBase:WBGene00057638" mRNA complement(join(<202251..202431,202479..202664, 202709..>202791)) /locus_tag="CRE_04104" /product="hypothetical protein" /db_xref="WormBase:CRE04104" /db_xref="WormBase:WBGene00057638" CDS complement(join(202251..202431,202479..202664, 202709..202791)) /locus_tag="CRE_04104" /note="contains similarity to Pfam domain PF01549 ShK domain-like; contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05129.1" /db_xref="InterPro:IPR003582" /db_xref="PFAM:PF01549" /db_xref="WormBase:CRE04104" /db_xref="WormBase:WBGene00057638" /translation="MKVKFLILLSLLFTLSNSADECADTSDKCSAWAKNGFCTNCFYN CDIRVKYCAKTCEYCTGQKTCENCTVTTTKPPPTTTTINCVDYGDYCKSWAMKGFCSN CFYKCSDRIKYCAKTCGFCTAGSCTDCNNVQNFKSLFSQTSLELLQE" gene complement(<203178..>203459) /locus_tag="CRE_04105" /db_xref="WormBase:WBGene00084315" mRNA complement(join(<203178..203319,203371..>203459)) /locus_tag="CRE_04105" /product="hypothetical protein" /db_xref="WormBase:CRE04105" /db_xref="WormBase:WBGene00084315" CDS complement(join(203178..203319,203371..203459)) /locus_tag="CRE_04105" /note="contains similarity to Pfam domain PF01549 ShK domain-like; contains similarity to Interpro domains IPR001368 (TNFR/CD27/30/40/95 cysteine-rich region), IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05180.1" /db_xref="InterPro:IPR001368" /db_xref="InterPro:IPR003582" /db_xref="PFAM:PF01549" /db_xref="WormBase:CRE04105" /db_xref="WormBase:WBGene00084315" /translation="MKLILLFTIFVFFFASSIYSADTCQDYGTFCESWKKNGFCEMCF YKCDVRVKYCPKTCGFCDPTKCVDCPPRATEH" gene complement(<205504..>206857) /locus_tag="CRE_04106" /db_xref="WormBase:WBGene00057639" mRNA complement(join(<205504..205630,205679..206174, 206392..206507,206601..>206857)) /locus_tag="CRE_04106" /product="hypothetical protein" /db_xref="WormBase:CRE04106" /db_xref="WormBase:WBGene00057639" CDS complement(join(205504..205630,205679..206174, 206392..206507,206601..206857)) /locus_tag="CRE_04106" /note="contains similarity to Pfam domain PF01549 ShK domain-like; contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05236.1" /db_xref="InterPro:IPR003582" /db_xref="PFAM:PF01549" /db_xref="WormBase:CRE04106" /db_xref="WormBase:WBGene00057639" /translation="MFRSTSALLLVLFYFSLTNCQFSISTQGPCQDDPTTDCKDYAAL CNNKMYQSFLDVFCPKTCGLCPGDTTVAPPTAAPNCVDTNINCKAWVKEGYCTACFVD CSDRVKNCAKSCGFCVEGSCLNYLCYQFNTPHPTPTRYLDDYKTYAESHVLIRKTAQM IRHSLFLICSVSFLLLVSCEYFEDTKCENDPTVDCDSFKDDCENDKLIPLLKKSCPVT CNLCPSTVSPTTLGPCEDSPGSNCSTFKDYCDNEKYIPMLKEFCPVTCNMCPGATTVS PPTPNPHCYDNETKCKEWKSRGYCTNCFYSCADKIKMCAKTCGFCTKGTCVDCKK" gene complement(<207427..>208101) /locus_tag="CRE_04107" /db_xref="WormBase:WBGene00084312" mRNA complement(join(<207427..207572,207622..207758, 207824..>208101)) /locus_tag="CRE_04107" /product="hypothetical protein" /db_xref="WormBase:CRE04107" /db_xref="WormBase:WBGene00084312" CDS complement(join(207427..207572,207622..207758, 207824..208101)) /locus_tag="CRE_04107" /note="contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05140.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="WormBase:CRE04107" /db_xref="WormBase:WBGene00084312" /translation="MPRRTRKPNQNRGSIQRKDELEAKVKLLEEKLLKSEQKEMIATE LYNKEKRLCSSARANSTYYRNKLISTTKEMTRITDKLNSATEDLKLIKRKKMLKAQET LRMNQELNEQEKKPWRLCEVCDEDYNHTANGTPRVLKCGHTLCHSCLAQIATSHYIQC PFDRLFTNIGVNELNDLPKNFVVLHM" gene <211822..>213210 /locus_tag="CRE_04039" /db_xref="WormBase:WBGene00057640" mRNA join(<211822..212097,212148..212249,212294..212544, 212596..212737,212783..212870,212918..213017, 213084..>213210) /locus_tag="CRE_04039" /product="hypothetical protein" /db_xref="WormBase:CRE04039" /db_xref="WormBase:WBGene00057640" CDS join(211822..212097,212148..212249,212294..212544, 212596..212737,212783..212870,212918..213017, 213084..213210) /locus_tag="CRE_04039" /note="contains similarity to Pfam domain PF04536 Domain of unknown function (DUF477); contains similarity to Interpro domain IPR007621 (Protein of unknown function DUF477); coded for by the following C. remanei cDNAs: DY525500" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05178.1" /db_xref="InterPro:IPR007621" /db_xref="PFAM:PF04536" /db_xref="WormBase:CRE04039" /db_xref="WormBase:WBGene00057640" /translation="MHPKLDPILILFPFLFISPSVAQFTSQTYPDPRLDPFSCRLALP SQVCDPSAIVSDEERSRLVQRVNQLHSLTSGIKNTSPSCALMPDRNLEIIVAIIDKIG SVPGVPIDIEKFANNLKRRYQNFQDVGMCDTTVLIVNSRQDRQVFTVAGRDAKISKDT LKSAFERNIGHFKTGRYALGLEGMIEVIVAAYSNAHIVQVPTPEAFRPTDFMPSPAAV SAVESQPFRAAGLPNSVQPAKRPFPAFNSIQENIEEDDKIWVSILQQAMARCGQNDAD LPKHVRAVVEEAMNISLKLISDSRYNKIEEETEQNKEVLGSRQKAWDTATNEFIRPLF QKYRNSVLSGATQTCPVSAAGTRKRHL" gene <214294..>215757 /locus_tag="CRE_04040" /db_xref="WormBase:WBGene00057642" mRNA join(<214294..214710,214935..215153,215201..215370, 215420..215614,215664..>215757) /locus_tag="CRE_04040" /product="hypothetical protein" /db_xref="WormBase:CRE04040" /db_xref="WormBase:WBGene00057642" CDS join(214294..214710,214935..215153,215201..215370, 215420..215614,215664..215757) /locus_tag="CRE_04040" /note="contains similarity to Pfam domain PF00561 alpha/beta hydrolase fold; contains similarity to Interpro domains IPR000073 (Alpha/beta hydrolase fold-1), IPR008262 (Lipase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05216.1" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR008262" /db_xref="PFAM:PF00561" /db_xref="WormBase:CRE04040" /db_xref="WormBase:WBGene00057642" /translation="MPPLKLVKILFQREPVAENQPGCCDVFIDLLRACGLICYVACPP VPSIVTRKLAFHPPEKGMTYRIALKSDPEKRFKNIRGCRDEPVQLVVRNISNGADYIH SEKEVEVFSVTTANNNDLVCIKCTPDSYSSNPAVSDQVVLFCQPNSSDLGGFLQPSSM NFVTYANVFETDFYAFDYSGYGFSSGTQGEKNMYADIRAVYDKIRETRPDKKIVVMGY SIGTTAAVDLASSNPEGLAGVVLIAPFTSGLRLFSSKPDKPDTCWADSFTSFDKVNRI ETRVLICHGDLDEVIPLAHGMALYEKLKNPVPPLIVHGANHHTILSGKYIHVFTRIAG FLRHETLVSCRSIEVDSQQSSSKKKTESEE" gene complement(<215873..>217771) /gene="Cre-cyp-37A1" /locus_tag="CRE_04108" /db_xref="WormBase:WBGene00057644" mRNA complement(join(<215873..216393,216439..216607, 216654..216943,216990..217089,217137..217322, 217370..217488,217540..217636,217691..>217771)) /gene="Cre-cyp-37A1" /locus_tag="CRE_04108" /product="CRE-CYP-37A1 protein" /db_xref="WormBase:WBGene00057644" CDS complement(join(215873..216393,216439..216607, 216654..216943,216990..217089,217137..217322, 217370..217488,217540..217636,217691..217771)) /gene="Cre-cyp-37A1" /locus_tag="CRE_04108" /note="contains similarity to Pfam domain PF00067 Cytochrome P450; contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR002402 (Cytochrome P450, E-class, group II), IPR002403 (Cytochrome P450, E-class, group IV)" /codon_start=1 /product="CRE-CYP-37A1 protein" /protein_id="EFP05219.1" /db_xref="InterPro:IPR001128" /db_xref="InterPro:IPR002401" /db_xref="InterPro:IPR002402" /db_xref="InterPro:IPR002403" /db_xref="PFAM:PF00067" /db_xref="WormBase:CRE04108" /db_xref="WormBase:WBGene00057644" /translation="MGFAVYLVALVILYVGFNLKKILKFVKERKRLYELMDKIDGPLA LPLLGTTFQFKMDPVEFAMQLYNWGLEYSAKGASLAKFWMGPYPMVIILTPEASKKIL ESNVLINKSSEYDIFLPWLGTGLLLASGDKWRGRRKMMTPSFHFNVLIDFQAVFDNQS KILLEQLEEALKKVKDNTIDAFPYIKRCALDIICETAMGTTVSAQTNHTHPYVMAVNE MNSLAFKYQRMPWLWIKPIRHLTGYEADFQRNLDIVTSFTKKVIEEKLKEHEENGGIS EVDKSKKAFLDMLIDKKEEGGLGYEDIREEVDTFMFEGHDTTSAGIGWSLWCLANSAE YQKKCHEELDQIFEGSSRECTVEDLKKMKYLEKCVKEALRMRPSVPQIARSVDEEFEL GKINRILETITLFFSDGTIIPKGCSIMVSPAFLQNNPRTYANHEIYDPERFSEEEISK RHAYAYIPFSAGPRNCIGQKFAMQEEKTVISWVLRKFHIHTDIGILENFPLPETITRP TMGFPLKFTVRQ" gene complement(<218725..>220523) /locus_tag="CRE_04109" /db_xref="WormBase:WBGene00057645" mRNA complement(join(<218725..218852,218897..219054, 219381..219518,219564..219707,219757..219899, 219951..220027,220271..>220523)) /locus_tag="CRE_04109" /product="hypothetical protein" /db_xref="WormBase:CRE04109" /db_xref="WormBase:WBGene00057645" CDS complement(join(218725..218852,218897..219054, 219381..219518,219564..219707,219757..219899, 219951..220027,220271..220523)) /locus_tag="CRE_04109" /note="contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595; contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05144.1" /db_xref="InterPro:IPR007669" /db_xref="PFAM:PF04590" /db_xref="WormBase:CRE04109" /db_xref="WormBase:WBGene00057645" /translation="MVKRNKNENEKPPLPTTPPPPPVGELPVQYKRMSASRNDPPAPP SNRLYGFIPVLICLSLLWFAWSQWHNPPQVQQQPVRVEDHHKKRVWWMPDLLKTLPPF AEGYRLEHYVPKYKISGCAINGNFPEISAAIFCFLHNSTLFTAANKTISEDLGENGLC SKIKSFTMTDWKLWKKHITDKKLRRVAFVQNPLERFARTFRKICEIERKCLNCQENVG CFMRKLIKEHEKVAEGLAGHVRSYITNYFSPQSWNCHFNRQLRVVETLKIGGNQTELA RFSDELSKILGEQGVPKEALNTIKEEVMKIPLTLSADERRIMEKIKKDEDLFRIFRYL YEHDYIIFGFDI" gene complement(<224682..>228248) /gene="Cre-daf-5" /locus_tag="CRE_04110" /db_xref="WormBase:WBGene00057646" mRNA complement(join(<224682..226152,226628..226811, 226858..226976,227980..>228248)) /gene="Cre-daf-5" /locus_tag="CRE_04110" /product="CRE-DAF-5 protein" /db_xref="WormBase:WBGene00057646" CDS complement(join(224682..226152,226628..226811, 226858..226976,227980..228248)) /gene="Cre-daf-5" /locus_tag="CRE_04110" /note="contains similarity to Pfam domain PF08782 c-SKI Smad4 binding domain; contains similarity to Interpro domains IPR010919 (SAND-like), IPR014890 (c-SKI Smad4 binding)" /codon_start=1 /product="CRE-DAF-5 protein" /protein_id="EFP05147.1" /db_xref="InterPro:IPR010919" /db_xref="InterPro:IPR014890" /db_xref="PFAM:PF08782" /db_xref="WormBase:CRE04110" /db_xref="WormBase:WBGene00057646" /translation="MSDDSIGSSQRVAVEPEHHTPDLMDNDPLLENLKALHEETRSDD EGQEDDGQPGTSAPKKKEEQEEMAEPIGYRTKDEYHGKFAWISTMGKRIPSLLLNGEP YMPIEFLRKELSELQSLNSVENFTRFIEIKGIILRMCNPVQFNAIMDKSDVCRSLNLT SINLISRSDLERIMGESRTESCLTKSEHDIWNPEDRIHIVHINFVDYLDDWLESDDLD EDPMEVGEKTITTTILLLKLYFQSGVHGYWYKNRPTMRCIICRECDMKFTPNDFIVHH HYPKKEGGVIHMGLNSQRWSELIEVHSEHRTEVNLDAWNKFRMNSHRIGKRAYDDAEP QEPKKVAREKKIVVDDDDDSMEEDEDEGEEIPSEKPQLSDFLGPKGLKGLVPRNKLEK TILNCLNRMDEATLELLFLKTPEEYYTWIRECEFRQKVIAQQKEWEAKQKDPKSRLRT SANFNPNIGSFENMHMLHSAPKSTQKEIKLLADRFSRLQEEMSGQKVFNAWEFMLKEK ELIASSSTDALRVLSNKPLPPPPKPKVVTPILPIKPTLPTLPISFSNINLAQVAQQLV ASGIKLPLPLPLPLVSPASSTVPTTSAPTPAPSKPLPVLPFPTMPLPALPVNTNYEIL VSFELNIFPRLFDCFQKQQLSLALSSPSLFPIFYPKIPTSAYENLVNLLKTTAVKN" gene <243554..>244019 /gene="Cre-rpb-11" /locus_tag="CRE_04041" /db_xref="WormBase:WBGene00057647" mRNA join(<243554..243628,243678..243742,243791..>244019) /gene="Cre-rpb-11" /locus_tag="CRE_04041" /product="CRE-RPB-11 protein" /db_xref="WormBase:WBGene00057647" CDS join(243554..243628,243678..243742,243791..244019) /gene="Cre-rpb-11" /locus_tag="CRE_04041" /note="contains similarity to Pfam domain PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain; contains similarity to Interpro domains IPR008193 (DNA-directed RNA polymerase Rpb11, 13-16 kDa subunit, conserved site), IPR011261 (DNA-directed RNA polymerase, dimerisation)" /codon_start=1 /product="CRE-RPB-11 protein" /protein_id="EFP05136.1" /db_xref="InterPro:IPR008193" /db_xref="InterPro:IPR011261" /db_xref="PFAM:PF01193" /db_xref="WormBase:CRE04041" /db_xref="WormBase:WBGene00057647" /translation="MNAPAAFESFLLLDDKKFYIEKDTKVPNAAIFTINKEDHTLGNM LKVQLLKDPEVLFAGYKNPHPLEHKILLRIQTTSQTTPADALTTAITDLVGELSLLEH RIDAAIKKCTSASDHDRGYN" gene <244163..>245315 /locus_tag="CRE_04042" /db_xref="WormBase:WBGene00057648" mRNA join(<244163..244358,244402..244520,244751..245047, 245102..245199,245246..>245315) /locus_tag="CRE_04042" /product="hypothetical protein" /db_xref="WormBase:CRE04042" /db_xref="WormBase:WBGene00057648" CDS join(244163..244358,244402..244520,244751..245047, 245102..245199,245246..245315) /locus_tag="CRE_04042" /note="contains similarity to Homo sapiens Protein SLC7A6OS; ENSEMBL:ENSP00000263997" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05225.1" /db_xref="WormBase:CRE04042" /db_xref="WormBase:WBGene00057648" /translation="MSAPLIRVSRKRTADPHEALILHTKRAKQAAPLVFTLFKAAASG TDEELTGARVLDLPRVENRMEDERLVGESSDNPLGFVKDEAVGLVGEVEKQQKAEENV QVSLNGRLLLPVTNSESASAQDDVVYDYYAIHEKPGNAGIVGGDSANWEADIEGADVR FANRDELDLGDDDDSDGPPADDEDDSNDEDNWRNDYPDEDSYDEDSDHGDPYGMLEPG RWHVGEEYADESFNRRLQNMDLNEERYESYFEGEDTDDDGE" gene <245605..>248036 /gene="Cre-lem-2" /locus_tag="CRE_04043" /db_xref="WormBase:WBGene00057649" mRNA join(<245605..245686,245729..245852,245912..245997, 246322..246473,246520..247534,247581..247767, 247883..>248036) /gene="Cre-lem-2" /locus_tag="CRE_04043" /product="CRE-LEM-2 protein" /db_xref="WormBase:WBGene00057649" CDS join(245605..245686,245729..245852,245912..245997, 246322..246473,246520..247534,247581..247767, 247883..248036) /gene="Cre-lem-2" /locus_tag="CRE_04043" /note="contains similarity to Pfam domains PF03489 (Saposin-like type B, region 2), PF09402 (MAN1 C terminal), PF03020 (LEM domain); contains similarity to Interpro domains IPR013142 (LEM-like region), IPR008138 (Saposin-like type B, 2), IPR003887 (Lamino-associated polypeptide 2/emerin); coded for by the following C. remanei cDNAs: DY526020, DR778468, DY527745, DT933196, DR408366" /codon_start=1 /product="CRE-LEM-2 protein" /protein_id="EFP05190.1" /db_xref="InterPro:IPR003887" /db_xref="InterPro:IPR008138" /db_xref="InterPro:IPR013142" /db_xref="PFAM:PF03020" /db_xref="PFAM:PF03489" /db_xref="PFAM:PF09402" /db_xref="WormBase:CRE04043" /db_xref="WormBase:WBGene00057649" /translation="MGIQDANALCEAVLGFNDVVEKVCKSVVEDILGELYTQLKKFEP DHSACTHLHLCDACIVPGFYTEAPTQLPNIQHKQEVDAATLIRGIAKLHHLAFKKLTM VDVEKMSDAELRAELTSLGANVGPVTGTTRSLYEKKLKKLIAGGAKTPARPTPSASVV AKSVPKTTQKAVPKSPSRKPEKTPDTSRRSIPRAAANSTINSTFNRSEVEEMSDSDDG QEDEEILSPKSRQASFRSTDTTTSSVGRGRPVSSTPTKKMSPINKPSPFTTSSAARIS STKTTINTTTRIPTTPKSVHVPVPGLITDFTPSFATFGSDRPGATPPRKSIYASKVTK GLHDLGNTTGEEDDDDFEGQESSRIIYKSEEPSKGIVKNAWNKVLGYGFNASKVPGES YDLRAGSSRVRVQKNPRTGKVTVKQSNIFNDAIWVALYAIIILFVVLVIAYALTTHQP KTANLAGYWGVLKAAGRDSINFFYNYAILPIATLGILVIIGAGIYLGHRKYKEQKEIE ENKLYDLIENITDLIKASNAEGDEYLSQPHVRDLMFPPAKRRAAEMTRWEKAVEFIDT NESRVATDVLVLPSGNECAVWKWVGNKSTQKRW" gene <249133..>254719 /gene="Cre-xrn-1" /locus_tag="CRE_04044" /db_xref="WormBase:WBGene00057650" mRNA join(<249133..249339,249386..249486,249535..249742, 249790..250095,250146..250646,250696..251330, 251386..251819,251866..252134,252184..252337, 252384..253135,253186..253374,253421..254400, 254449..>254719) /gene="Cre-xrn-1" /locus_tag="CRE_04044" /product="CRE-XRN-1 protein" /db_xref="WormBase:WBGene00057650" CDS join(249133..249339,249386..249486,249535..249742, 249790..250095,250146..250646,250696..251330, 251386..251819,251866..252134,252184..252337, 252384..253135,253186..253374,253421..254400, 254449..254719) /gene="Cre-xrn-1" /locus_tag="CRE_04044" /note="contains similarity to Pfam domain PF03159 XRN 5'-3' exonuclease N-terminus; contains similarity to Interpro domain IPR004859 (Putative 5-3 exonuclease); coded for by the following C. remanei cDNAs: DR407702, DT937479" /codon_start=1 /product="CRE-XRN-1 protein" /protein_id="EFP05235.1" /db_xref="InterPro:IPR004859" /db_xref="PFAM:PF03159" /db_xref="WormBase:CRE04044" /db_xref="WormBase:WBGene00057650" /translation="MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCS HPNDDDVTFRITEEEIFINIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRF MSARTANSQMEKAIANGEILPTEKRFDSNCITPGTYFMTRLHNKLDEWIKKKSASDSH WQGRKIILSGHNVPGEGEHKIMDFIRTERAKSGYDPNTRHCMYGLDADLIMLGIVSHE PHFSLLREEVTFNSRPRKNEQKNKKPKRTDSDVKTFHLLHLSLLREYLAWEFADVKES LPFAYDMERIVDDWIMMGLLVGNDFLPHLPSIHIHDDALPLLYSTYKKVLPTLDGYIN ESGYLNLARFEKFLEQLSLNDKNSFMDKLEDEQFMESKKLRPSQNDIFQEASVEEELV AFESSDIESDAEDKDDEKNETDENGDDDAAFVSDHEEENESEDKLSGKELSSENSDDV LLEEEFNDELATLALSGMDDADFANNVEACWTKTLDNQFKRHKKSYYSNKLRYKNISK TELRAQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFANMKIEFELSQP FHPFEQLLAVLPEASADCLPKPLQELMSSDPTKSMIHDFYPANFETDLNGKRNDWEAV VLIPFIEEKRLLEAIESKRNRLSREENMRNTHGCHIECISTRQDDGQWSVIRSELPQE IYRIPKEQVKWGLLPNVKMDVYFPGFPTMKHLSHSGQLKFANCNIFGMASRKESMVLK VENEKSEKDIIEWGSELCDEEVCIDWPILKLAKVDSIWGGEDKIVRKLPGDDEIIVKD MNEEEKRQWQAYVNQLTERLMSRYAIEIAGQKDSKGKHIRPPIAWVRKFTGLVYETKE GEDGSAPTLKAVKQWSSPQTLIPVLLPLVVKDVLLENARLLADLPVPIAYPQQSVVWI TDTRVALYGMPGMVGGYRNEKTSNCQVDVVGMVSDNRIAVMEELRKQVDQKSLRWMAG YDCARQCQVDVRLFARITGTMFLWNEPRARVEKGQQLSSDSKINCGLCLKFSKRDMCV ADYTDRTEHTNHKGMTTRVWSYTNLTCRLITEYKKKFPELWRHLESASSTQMDDVYYA EDIWAEKVRDHRFGELKEFLDNLPSRDAEQLKCGTVYVDRQMITEVEKVISADPVKKP VMGRFYVSPSILFRYELYDGKVQADSEVEFLILDRVSIMSSDTKVPKVVQGTVVGIHD DKIDVLFDREYEGGSKVRGSRLTSAFRVPRTALFNITFGLIRKNDQNKKKVDQEFDGA YTPLPQKNSKHQQKNNDWQPSTSTPSTSSSYSNSKNQKNNSKKDNQKQSKKEKKCENN VMKRNSVETPEALTNSLNKLLKIKSGNPQAAAASSSSATSSEVPTTSGKQVSLMELLG GSTSKKNTQSGPQMLKKPDGSKNLEDIEMSNKNQKQEKKPANSILQQLSDAQSNSKKQ KHQKNQKEKKSDDWQKKNDVSKASKSSKNSKDHNNQKPKVEILRKTSPTQQEQQHAIH QTHPEQQQHAPQFKTSSPQLAHPQPSGPFVMSPPNFNFSVPPPAHFNQPPIAMFPGMV QMTPMGLQMAPIGMVGQHNQHNMGYDNRRHNPTLTDFKPSAISRRPNHRSTNQPPKVT MITKRKTVTPPPLPAEVDKSVENKANTPPASSEEKSKKPRKKKQSRLGVNFCNPSPST " gene complement(<255022..>257018) /gene="Cre-col-87" /locus_tag="CRE_04111" /db_xref="WormBase:WBGene00057651" mRNA complement(join(<255022..255495,255540..256072, 256121..256457,256503..256706,256759..256827, 256872..>257018)) /gene="Cre-col-87" /locus_tag="CRE_04111" /product="CRE-COL-87 protein" /db_xref="WormBase:WBGene00057651" CDS complement(join(255022..255495,255540..256072, 256121..256457,256503..256706,256759..256827, 256872..257018)) /gene="Cre-col-87" /locus_tag="CRE_04111" /note="contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies); contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-COL-87 protein" /protein_id="EFP05221.1" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="WormBase:CRE04111" /db_xref="WormBase:WBGene00057651" /translation="MHPLSSSFFKTLAYIPTVLLVFSLIVLVYFSTDLQKFEAKCKSQ LILFQTFEKAAWKDIIDFEKIHTRSRRQTENSTPKKRKTRKSKLRKMKKPPKLPHLYQ KQLVPVAEELTEFEGYRNSDWKKESKSDSENESGETEITTSGETENPDDIGIEEKETE ENEEDSEDLEKQETSESSTEQPITEVIRNMSTREMKMKYGRTEGGLAQLLEIDDGGDE EEEEDEEEEVEGEGGGETDGYYTEEDGDDNEEGCADTDIKCYGNPCPRGPPGPPGLPG SPGEDAPDGIDGGNGTEWELQAEDRVIILGCVKCPQGPRGVEGDPGPPGDKGGIGKNG NPGLDGYEGFPGQTGEEGESGYDGDFGPDGWPGQRGEDSKIYRNLPGPPGPPGVVGPP GDNGDYGNLGNAGTEGIAGVAGAPGHHGIHGPPGAPGAPGEPGLSGGYVGHCKCPERR RPVGGGGGGYPLSPQPVYQTPQSVEYHLPYATSTSGYYQSSSSFYSESNYVETTTEAP TTSIYRYFVKASAPGYKTLSTDSEYVETTTKFIQTSEYSAGKENAYVERFLQKASQHL SESEAFDPPEDHLSISSNGRI" gene <258033..>258358 /locus_tag="CRE_04045" /db_xref="WormBase:WBGene00057652" mRNA join(<258033..258162,258213..>258358) /locus_tag="CRE_04045" /product="hypothetical protein" /db_xref="WormBase:CRE04045" /db_xref="WormBase:WBGene00057652" CDS join(258033..258162,258213..258358) /locus_tag="CRE_04045" /note="contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05169.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00097" /db_xref="WormBase:CRE04045" /db_xref="WormBase:WBGene00057652" /translation="MLYVYKKLQEAQEKSDETTKPWKMCEICDTEYGEAADSVPRVLA CGHTICHTCATKLATSEYLRCPFDRKCTNLSNCTLESLPKNFTVLHM" gene <263309..>264809 /gene="Cre-gur-4" /locus_tag="CRE_04046" /db_xref="WormBase:WBGene00057655" mRNA join(<263309..263525,263572..263802,263844..263959, 264004..264252,264297..264470,264521..264685, 264732..>264809) /gene="Cre-gur-4" /locus_tag="CRE_04046" /product="CRE-GUR-4 protein" /db_xref="WormBase:WBGene00057655" CDS join(263309..263525,263572..263802,263844..263959, 264004..264252,264297..264470,264521..264685, 264732..264809) /gene="Cre-gur-4" /locus_tag="CRE_04046" /codon_start=1 /product="CRE-GUR-4 protein" /protein_id="EFP05113.1" /db_xref="WormBase:CRE04046" /db_xref="WormBase:WBGene00057655" /translation="MELQEVLIAQPDEQKPRNFKKSEQEQLELINHYHKHFGSYVFFV AKILRIDLRKPGRKRKVNGIVAGILFLIATYSICFNIRITFSTRHLSAELAAQLLIIL WAVQSLISMGFLVYWQIYGHLSEFRIKLALCQNLKGLESENGKKYVEVTTRCFFSAIF LTCSITAALATKYHMEEKHTEFQEKQSFIFVYPALRPLYTLVTTYLYIVFNMTLFILI HYTNATMLEMRYFNEEISNFNGSGEGASEKLMEHLEIYSNLVTVIRHLDLIFRLYTFI MIVITIPSMIFTLMMMNHRIHSLFDLFLCMPTIGLCAFSFFAVTIAPARLHDEICRSK GFLCQNRSIWFPYRKEVYLIANTLCSHMEQFDLGVSVWGFALLSRPLILGTLSATAMM LSLLTELAPKAELLNEV" gene complement(<265038..>265497) /gene="Cre-cpg-7" /locus_tag="CRE_04112" /db_xref="WormBase:WBGene00057656" mRNA complement(join(<265038..265349,265450..>265497)) /gene="Cre-cpg-7" /locus_tag="CRE_04112" /product="CRE-CPG-7 protein" /db_xref="WormBase:WBGene00057656" CDS complement(join(265038..265349,265450..265497)) /gene="Cre-cpg-7" /locus_tag="CRE_04112" /note="contains similarity to Homo sapiens retinitis pigmentosa GTPase regulator isoform C; ENSEMBL:ENSP00000367766; coded for by the following C. remanei cDNAs: DT937037" /codon_start=1 /product="CRE-CPG-7 protein" /protein_id="EFP05176.1" /db_xref="WormBase:CRE04112" /db_xref="WormBase:WBGene00057656" /translation="MQTVTILALLACIAVPIFADFDHLRARRDVVEASGEGSGESSGE KPIVEASGEGSGESSGDKPVVEASGEGSGEGSGASDGVLESSGEGSGENNTNAVVASD SPKDVKALTANEFAVSV" gene complement(<269903..>272481) /locus_tag="CRE_04113" /db_xref="WormBase:WBGene00057657" mRNA complement(join(<269903..270168,270225..270409, 270463..271086,271136..271435,271471..271632, 271679..271802,271849..271943,271989..272095, 272142..272237,272284..>272481)) /locus_tag="CRE_04113" /product="hypothetical protein" /db_xref="WormBase:CRE04113" /db_xref="WormBase:WBGene00057657" CDS complement(join(269903..270168,270225..270409, 270463..271086,271136..271435,271471..271632, 271679..271802,271849..271943,271989..272095, 272142..272237,272284..272481)) /locus_tag="CRE_04113" /note="contains similarity to Pfam domain PF05089 Alpha-N-acetylglucosaminidase (NAGLU); contains similarity to Interpro domain IPR007781 (Alpha-N-acetylglucosaminidase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05242.1" /db_xref="InterPro:IPR007781" /db_xref="PFAM:PF05089" /db_xref="WormBase:CRE04113" /db_xref="WormBase:WBGene00057657" /translation="MPRTNCFYVSLLILVWAKTGEGALRVQLPDYDKNSWRNVLKRVA PDWVLEEFQDVRVSSAAENGFQLPKSGNARIEISKHGKKSVMANTPTDALNAINTYLR TQCLSQVSWSNSSFSSGCRKHSNDILNFESKQIRYFGNMCTFSYSFAWWEWPQWEKFI DWIALNGFNTVLMPLGQEAIWRDVFMGLGVERDELDSYFTSQAYLAWHRMGNLKAYGG GLSDAQMLNDFNLAKRIINRLLELGIVPILPTFAGFVPDQLEKDFRLFPTSKFNRLPC WNNFTSETSCLLSVSPFDPLFQKIGSTFLRHQKKMLGGDITNLYSADPFNEILPSDSS KFDASFMKQTAQSIMNSCRKVDKNCIWVLQSWSFTYDQWPNWAIKSFLSAVPIGNLLI LDLYSEVVPAWQMTSSFHGHNFVWCLLHNFGGSRELRGNLQKVDKGYQLALMKAGSNL VGAGLSMEAIDQNYVVYQFMIDRMWSQEPIPLNNWLKSYSESRYSADFKVSHKFWTIL AGSFYSQPEKWGNPRFSVFLYHRPAFAKKIEYWFPVEETFNHLQSLMPSLMHVLGDHP LFKEDLNDVMRAVIQFEIGNEAALSLTEAFLMEDKQQIGASCENLMDMFQKLESYSNR DFKEWIEDSKSIAPTSEERQVFPVTASDILTVWGPTGQNLDYAHREWAGLLSGYYGRR WQYFCDWILEHDVFNHTDFSISVFRDVERPFAISNI" gene <277734..>278476 /locus_tag="CRE_04047" /db_xref="WormBase:WBGene00084314" mRNA join(<277734..277848,277892..277983,278026..278214, 278324..>278476) /locus_tag="CRE_04047" /product="hypothetical protein" /db_xref="WormBase:CRE04047" /db_xref="WormBase:WBGene00084314" CDS join(277734..277848,277892..277983,278026..278214, 278324..278476) /locus_tag="CRE_04047" /note="contains similarity to Pfam domain PF00075 RNase H; contains similarity to Interpro domain IPR002156 (Ribonuclease H)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05174.1" /db_xref="InterPro:IPR002156" /db_xref="PFAM:PF00075" /db_xref="WormBase:CRE04047" /db_xref="WormBase:WBGene00084314" /translation="MSQQQQSNFSMDLYTDGAALRNGQNDAKGGWAVVYERNGQIFVS KHYFSWGRQTNNLYELTAIFEAIRIARRIGIRNITIKTDSMYSINAITKWYWNWRKNG WLTRARKSVKNREIIEEIRKSMSDVRYEGGAVKIEYVKAHGQDYLNNLADKNAKLAAY ENPIYDYQKYRKYRKIPKDLLE" gene <279355..>282514 /locus_tag="CRE_04048" /db_xref="WormBase:WBGene00057658" mRNA join(<279355..279787,279831..280918,280966..281452, 281505..>282514) /locus_tag="CRE_04048" /product="hypothetical protein" /db_xref="WormBase:CRE04048" /db_xref="WormBase:WBGene00057658" CDS join(279355..279787,279831..280918,280966..281452, 281505..282514) /locus_tag="CRE_04048" /note="contains similarity to Pfam domain PF01030 Receptor L domain; contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05167.1" /db_xref="InterPro:IPR000494" /db_xref="PFAM:PF01030" /db_xref="WormBase:CRE04048" /db_xref="WormBase:WBGene00057658" /translation="MYFSEYSRRPRLIFDNCQDGWFPFQNFKVGQQLEQVEIHIKNSC FGCDFDNKKSPKSMDLIDRFGSFVVRIDHKCNWRYWNFDVSNINVKKYDTHMRPDLIY TSAVDVISLKVKGFGTNLNLMNSFLVKRFRLDWIRSVGVTNFEYKNGCLVFGETDPRA AFQLKELRQLHYDKENFQNSAPFVINSSNMACIDISEKIKLYEKFGVVALHILDSCHD RRKVLILDGRQPFEYIENRGDAKFRPGDTLLFVRIRYFTEKDHLKKLDEWLMRLGYHN VIEVGESQKVPKVPEVTVRDSISTFNPLPYLKRAVRGHDSDGNSNITVSETLEFYARI TKFFQLPIFYFRNNSGLDCGRRRTVNVLTRSIGENTATSLLDCECGQMTSSGFFWDHC LSHFGTIEIKGSTGSEDISKYERIREIRDGQLWIHDTETLTDLKSFKALKHIQCESKH NEGFENIKTSAIRIDGKNTKLENVELLNLTKTENCDRLVSIYGDKKILPIYSESQWMH SNSTNNLGGNKSKFTIVMKSLVIFILSACIAYSGRNGGLTAEFAHQLEGCVTIEGDLT IDGFGNDVPKVTAALRNIHSVQGNVLIKNLYAENYTFLKDVKHIGGNLTVQNNPVLKR MSLSLRTLGGEINILKSKLLCLEDSEMILLIERLKNKTSVMGCPYPDKNILSLFEDRF GDVLNLSHIGIALIFPIFVCYIMGAILLKQLKVLNITRWRKITDLDIRLKTDGNAYLN EETSDEEPDEMRLRKETLAWYGLDGNAYGGEQIQQEKKLFGENRIHKMTAWMGTKKEL ESDCEFFGQSWLRRKQKTKKQAKEEHPFESRRTRWHVRETLSKVEGEDVEMEIAFYDS LSSCIKEVSNDGCIDVRNRLMILLSMMEREGFMKKPHIVSNYNKIERGIAILETYAAK HDVESWKRLAELKTKVNKEALDVLRNEFQISSDAGDTKTAKEKRMTAGSQEIAKKRKN KGMFAKVIVETLHWIPPDEIEYERRKKTDHGHF" gene complement(<282696..>283448) /locus_tag="CRE_04114" /db_xref="WormBase:WBGene00057659" mRNA complement(join(<282696..282860,282973..283036, 283080..283192,283234..283344,283395..>283448)) /locus_tag="CRE_04114" /product="hypothetical protein" /db_xref="WormBase:CRE04114" /db_xref="WormBase:WBGene00057659" CDS complement(join(282696..282860,282973..283036, 283080..283192,283234..283344,283395..283448)) /locus_tag="CRE_04114" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05207.1" /db_xref="WormBase:CRE04114" /db_xref="WormBase:WBGene00057659" /translation="MSADREFSHITLSSTPFKYRMDQQAKKNDSDVEKDRNIAIKCAE RFNYNTNLLRKVTLSDRFELAALGFEMKSKPSSYLDKNQESEEFDYIYRKEKKQDYNA SPLPAGMSPTNPLPAGRGFLSPAIQATNSAFPFAGSPRSTPQKYSNSPAPRQPIRSLF DDIPANIA" gap 284167..284176 /estimated_length=10 gene complement(<284734..>287182) /gene="Cre-nhx-2" /locus_tag="CRE_04115" /db_xref="WormBase:WBGene00057660" mRNA complement(join(<284734..284962,285012..285289, 285333..285422,285464..285607,285653..285926, 285975..286300,286366..286499,286649..286915, 286990..>287182)) /gene="Cre-nhx-2" /locus_tag="CRE_04115" /product="CRE-NHX-2 protein" /db_xref="WormBase:WBGene00057660" CDS complement(join(284734..284962,285012..285289, 285333..285422,285464..285607,285653..285926, 285975..286300,286366..286499,286649..286915, 286990..287182)) /gene="Cre-nhx-2" /locus_tag="CRE_04115" /note="contains similarity to Pfam domain PF00999 Sodium/hydrogen exchanger family; contains similarity to Interpro domains IPR006153 (Sodium/hydrogen exchanger), IPR004709 (Sodium/hydrogen exchanger subfamily); coded for by the following C. remanei cDNAs: DR780963" /codon_start=1 /product="CRE-NHX-2 protein" /protein_id="EFP05198.1" /db_xref="InterPro:IPR004709" /db_xref="InterPro:IPR006153" /db_xref="PFAM:PF00999" /db_xref="WormBase:CRE04115" /db_xref="WormBase:WBGene00057660" /translation="MNLLQRSLILLIGLLLVVNYAGAECEEKEEEYPSRYPIAYFEWE NVKIPMTICLWLIGASIAKIIFNLIPHLNELFPDSALLIMIGLIIGIIFKLAGVNKNA FFLESEVFMLYLLPPLVFDAGYFMPARQFFDNFGSILCFAMLGTTFNIVAIALSLWAI GLTGLFSVETPLIHMLLFGSVAADVDPVAVIVIFEELKVNEVLFIAVFGESLLNDGVA VVLYRMFLTFSEIGTENLITSDYINGGVSFLVVAFGGIGIGLLFAFLASLLTKYARGD EIKVLNSVFILILPYTCYLCGELFGLSSIMAIVFCGAAMRQYCRENVDPDTVRSTESF IKVLSLASETVIFVFLGLSTVSSNHHWDTSFIVLTVVFCLIYRTLGVVVMCYFLNKYR LNKYTKVDQFIMAYGGLRGAIAYGLVVAIPEFIPAKNMFVTSCIIVIYFTVFLQGITL KPIAEFLQVEKKNVHSKNMIEHIYSELIDTTMAGMEDIAGFKGHHWIRDSWNTLNNNY LRPILVNKSNMREMDKTKLVRKYKHLVDEDAKKIARGDYNSNLVFTRALIEHTRSRTN TVIEGVSPTGKIDFGKHMKEQHGITLYDEHDNVPVSTSNIFQETSEIEYSTRTEQIET VGVQNDGYESDESSNFHERV" gene complement(<288518..>290997) /locus_tag="CRE_04116" /db_xref="WormBase:WBGene00057661" mRNA complement(join(<288518..288827,288879..289014, 289065..290328,290376..290719,290763..290905, 290954..>290997)) /locus_tag="CRE_04116" /product="hypothetical protein" /db_xref="WormBase:CRE04116" /db_xref="WormBase:WBGene00057661" CDS complement(join(288518..288827,288879..289014, 289065..290328,290376..290719,290763..290905, 290954..290997)) /locus_tag="CRE_04116" /note="contains similarity to Pfam domain PF03190 Protein of unknown function, DUF255; contains similarity to Interpro domains IPR004879 (Protein of unknown function DUF255), IPR012335 (Thioredoxin fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05146.1" /db_xref="InterPro:IPR004879" /db_xref="InterPro:IPR012335" /db_xref="PFAM:PF03190" /db_xref="WormBase:CRE04116" /db_xref="WormBase:WBGene00057661" /translation="MLNRPVHASNLVFRMFATYKNRLGLEKSPYLLQHANNPIDWYPW GEEAFKKAKESNKPIFLSVGYSTCHWCHVMEKESFENENTAKILNENFIAIKVDREER PDVDKLYMAFVVVYLNFCFTSSFSFFQAASGHGGWPMSVFLTPELHPITGGTYFPPDD NRGMLGFSTILNMIQTEWKKEGDNLRKRGEQIIKLLQPETASGDVNKSEEVFQSIYSH KQSSFDSRLGGFGGAPKFPKASDLDFLIAFSSADSCGDKSKESTTMLQKTLESMADGG IHDHIGTGFHRYSVDGEWHVPHFEKMLYDQSQLLATYSDFHRLTGKKNENIKFVINDI FEYMQKISHKEGGFYSAEDADSLPKNDSKEKMEGAFCVWEKEEIKKLLCERKIGSADL FDVVADYFDVEDNGNVPRSSDPHGELKNKNVLRKLLTDDECAANHSLTVEELKRGIEE AKQILWEARTKRPSPHLDSKMVTAWQALAISGLVKAYQATEDVKYIERAEKCAAFVRK YLEENGELKRSVYLGVEGNIEQGHQNMKAFSDDYAFMIQGLLDLYTVLGKNEYLEKAI ELQKTCDQKFWSGNGYFISEQADEGVSVRMVEDQDGAEPTATSIASNNLLRLHDILEN DEYREKANKCFRGASERLNKFPIALPKMAVALHRWQNGSTTFVLVGEFESELLVEARR RLNEKLIENLSVVHIRSENEIGASGPSHNAMSQGPQPAVYMCKGFACGLPIRSIDALD KLFHKL" gene complement(<291154..>291524) /locus_tag="CRE_04117" /db_xref="WormBase:WBGene00057662" mRNA complement(join(<291154..291315,291411..>291524)) /locus_tag="CRE_04117" /product="hypothetical protein" /db_xref="WormBase:CRE04117" /db_xref="WormBase:WBGene00057662" CDS complement(join(291154..291315,291411..291524)) /locus_tag="CRE_04117" /note="contains similarity to Pfam domain PF07189 Splicing factor 3B subunit 10 (SF3b10); contains similarity to Interpro domain IPR009846 (Splicing factor 3B subunit 5/RDS3 complex subunit 10)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05229.1" /db_xref="InterPro:IPR009846" /db_xref="PFAM:PF07189" /db_xref="WormBase:CRE04117" /db_xref="WormBase:WBGene00057662" /translation="MALPGERFHVLAQLEHLQSKYTGTGHADMNRHEWVVNQHRDTRA FQMSHPGMNTYIAVVENESRARTRFNLINRMIQPCGPPPEKNPLDDV" gene <291781..>294388 /locus_tag="CRE_04049" /db_xref="WormBase:WBGene00057663" mRNA join(<291781..291844,291890..291940,291982..292094, 292142..292265,292341..292509,292562..292658, 292694..292919,292969..294010,294059..294124, 294163..>294388) /locus_tag="CRE_04049" /product="hypothetical protein" /db_xref="WormBase:CRE04049" /db_xref="WormBase:WBGene00057663" CDS join(291781..291844,291890..291940,291982..292094, 292142..292265,292341..292509,292562..292658, 292694..292919,292969..294010,294059..294124, 294163..294388) /locus_tag="CRE_04049" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related); coded for by the following C. remanei cDNAs: DY525378" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05239.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04049" /db_xref="WormBase:WBGene00057663" /translation="MSDHKESSHDEGELSDESHKRSNRASSSEEAKSTSSSKGLESKM RESILSRLSKRKQSESDDDTTEQRFSIQPKDAQKAKEERYREKERERRKEREHRDDRR GEREVETRQKDRDFKGRHEKPGRDVKSHEHRHHHHRKHEGDQHRRPERDRSSDRDADK HRRREDRNKDRHRKSRTPDEDQLKGSPIKKPRHTNNQEEAKLFDRGFSVLDPNYKTKE KEVLVVEDVEMSPIEILEEKDEKEIVEVIIDSPVGPKKYSKFESDPESDHDEQGKVES ENDDEDDDVVEVLDDPLNSDDESDDDKYNRTPEDREWEDMTEAEQRLHREAMKKRHAV RQKALISQLPVFYPGLMGCRNIDEYECVNRVDEGTFGVVYRGKDKRTDEIVALKRLKM EKEKEGFPITALREINMLLKAGNHPNIVNVKEILLGSNMDKIYMAMEFVEHDMKSLLD TMSRRNKRFSIGEQKTLMSQLLSGIEHMHKLWILHRDLKTSNLLMSHTGVLKIADFGL AREYGDPLRKFTSIVVTLWYRSPELLLGTRLYSTPVDMWSVGCIMAEFILLKPLFPGR GELEQIKKIFMELGTPTEAIWPGVTELDGWKALTFEKYPYNQLRKKFLAGRLLNDTGF KLLNGLLTLDPKNRFSASQALDHEWFTFREEPYPVPPEEFPTFPAKSEQNKAPPPAAK PKQPENRMAHVDPETAKLLKQFEVRPEQVKPGGFSLKFDPTRF" gene complement(<294901..>297865) /locus_tag="CRE_04118" /db_xref="WormBase:WBGene00057664" mRNA complement(join(<294901..294955,295005..295168, 295221..295403,295449..296001,296048..297483, 297529..297729,297773..>297865)) /locus_tag="CRE_04118" /product="hypothetical protein" /db_xref="WormBase:CRE04118" /db_xref="WormBase:WBGene00057664" CDS complement(join(294901..294955,295005..295168, 295221..295403,295449..296001,296048..297483, 297529..297729,297773..297865)) /locus_tag="CRE_04118" /note="contains similarity to Pfam domain PF04389 Peptidase family M28; contains similarity to Interpro domain IPR007484 (Peptidase M28)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05153.1" /db_xref="InterPro:IPR007484" /db_xref="PFAM:PF04389" /db_xref="WormBase:CRE04118" /db_xref="WormBase:WBGene00057664" /translation="MIRRRGGPNELRAEPSNISDHEDDQRTKRGRESIGFRHWIYFVL TVAVVYAGVVALHRRMPAVRDGSSFEEFSEQRARVLLKQLTALGPRPSGSANLEEKAF GMIQDRIEKVHSVVNDIGVNRMESDVQRPSGCFDLKFLSSFTLCYHKITNIVVRIGPK EGPSGNSLLLNCHFDTMPDTPGATDDAVACTILMDVLEVLAHSKTELQNDVVFLFNGA EENFLQAAHGFINQHPWRHDIRAFINLEGTGSGGREILFQAGPGNSWLLQTYLENAPH PFCSVLAQEIFQSGIIPSDTDFRIFRDYGRISGLDIAYTKNGWFYHTEFDEEWRIEAG AIQRAGENVLAVVRAILASPYLEKPASFDEENRWVFYDVVGLFTVYYSVSFGKLLNYL ACFATYLLVFLRVRKGVYSIGDLTAAFKHHVVALIAMTVTMLVIIAFVVQFDLVMCWY KMPEIVGALYVLPMLIAGAIVHSHYADNNRIRNVEMVQYDTILLSFASILFLMTFYNL SSAFYVLNNLILPVFKDIIIWTLGIFGVIRRVTPRILFFTQLFCFLPTFVFAAYAISQ CVDFFVPVMGRLGNAINPEFIMGPIGLVIASSFILFVNNLFYISRRMNYIIRVLFAIF ALFILVLMTTKVGYPYEYSHENPRLRRIIALHANRTIYDFEGHLIQKDNALFVHSLDY RGASDLPSHSFLQGSSAPNCTGVADEYCRMPYYTAIHELFPPEQSLWVPVPSPVVLPY PIDLQMVSRQVVGNNLNLTFEIRGGYDKMSLHVTPLNDYDLLSWSFTDIDIEEFGRRQ TYFVFMTYGHESPGVRRFWILLEHRNGAAPDPEKHENLELSVATHYAHGIYQETETLR QLRAMISSRRQTPEQAVGWWRWGITMVGGRSEIVVKLF" gene complement(<298338..>300030) /locus_tag="CRE_04119" /db_xref="WormBase:WBGene00057665" mRNA complement(join(<298338..298356,298495..298632, 298685..298947,298994..299098,299150..299302, 299354..299446,299831..299925,299967..>300030)) /locus_tag="CRE_04119" /product="hypothetical protein" /db_xref="WormBase:CRE04119" /db_xref="WormBase:WBGene00057665" CDS complement(join(298338..298356,298495..298632, 298685..298947,298994..299098,299150..299302, 299354..299446,299831..299925,299967..300030)) /locus_tag="CRE_04119" /note="contains similarity to Pfam domain PF03194 LUC7 N_terminus; contains similarity to Interpro domain IPR004882 (LUC7 related); coded for by the following C. remanei cDNAs: DT934507, DT933441" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05130.1" /db_xref="InterPro:IPR004882" /db_xref="PFAM:PF03194" /db_xref="WormBase:CRE04119" /db_xref="WormBase:WBGene00057665" /translation="MTDQMRDMIAQLMGSQHVDHKEKPSMPFDHHSVCRAFLLGICPH DMVPDSRLQNVVSCRKVHEPAHKADYERAQKERDHFYDVDAYEIIENAVRLVDVEIAK VREKLEDDVKTQTSQAADSKAKQVAEIEEKIAKNVEDIEKLGNEGKIEESMKLHKYVE ELREKIHEIEESQTEIKTAGPGSNSAKLRVCEDCGAQLNITDHESRIADHYNGKMHIG MVETRETYLKMKETIEERRKEREEKLGSQRGYQRRDTYGRRDRDRGDYRGGDRDRDRR NRDRSRSRDRSYRRDDRDRRYDRDNRDRRDRRY" gene complement(<300224..>301224) /locus_tag="CRE_04120" /db_xref="WormBase:WBGene00057666" mRNA complement(join(<300224..300656,300704..300833, 300884..301021,301074..>301224)) /locus_tag="CRE_04120" /product="hypothetical protein" /db_xref="WormBase:CRE04120" /db_xref="WormBase:WBGene00057666" CDS complement(join(300224..300656,300704..300833, 300884..301021,301074..301224)) /locus_tag="CRE_04120" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05179.1" /db_xref="WormBase:CRE04120" /db_xref="WormBase:WBGene00057666" /translation="MRSQLTFSTHRLACCFGHRCSVYATTSYENAFIPQKNSALFFQK RMLHVTDVQLVRARYPDEKQGKPQEENDGNQSNSEEKSSEQQEGPKKIDPATIRKLRM YVLAVAGLSFVTSFIMLSQMFTGDRNSTDGLASEDFTRPGIPMKTFVDNYLKHGEVKR IVFVPGNTRAIAILHPGAVIDGKPASDQSVVVEYPQNAQQFWADIRKAEAEIGIGLAQ GVQIDLYQGMTTLKYVFILKRKFQLIFFRVVELLIGVVILAWLGTQYGRLLRKRLLEN QAKNAKK" gene <301768..>303221 /gene="Cre-sre-1" /locus_tag="CRE_04050" /db_xref="WormBase:WBGene00057667" mRNA join(<301768..302032,302085..302172,302273..302415, 302463..302524,302575..302697,302744..302889, 302939..>303221) /gene="Cre-sre-1" /locus_tag="CRE_04050" /product="CRE-SRE-1 protein" /db_xref="WormBase:WBGene00057667" CDS join(301768..302032,302085..302172,302273..302415, 302463..302524,302575..302697,302744..302889, 302939..303221) /gene="Cre-sre-1" /locus_tag="CRE_04050" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor; contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)" /codon_start=1 /product="CRE-SRE-1 protein" /protein_id="EFP05134.1" /db_xref="InterPro:IPR004151" /db_xref="PFAM:PF03125" /db_xref="WormBase:CRE04050" /db_xref="WormBase:WBGene00057667" /translation="MNLPFSPVHKCPPEISFHCQWMFYFIHFEMLAMVIEIPSFLLVI YATIKSPFHYNLTFIGLFMLSGYYVFLVGRFITCLYEIGVVTLTDENEENEVYPTSLV IGSLMQFFYMGCACGISLAVAFERFFATYYVDTYETKKRKWISVLICSELTVACGVSA IIMLFDLLPISVMAFLGVFISCASFFFYLVLFIMNKRRLQTIQQERVDDMYTLSVRFQ LSENLRVMTLLRNVVIFSGVNNFIMAIILTLYMSKSFKTAYPVTCIYLHFAFNFCVII YSFLMLIIMVFSVKQYRVYFFSLRFVRKFKLFNLFISISDFSGVTLYPLVGRCFQNEF SMPHVQELSIRDETDSYFTNLSTQWDEKFERFNRS" gene complement(<303365..>307780) /gene="Cre-cpna-5" /locus_tag="CRE_04121" /db_xref="WormBase:WBGene00057668" mRNA complement(join(<303365..303436,303484..303608, 303659..303842,303887..304168,304215..304421, 304473..304548,304592..304726,304778..304860, 304911..305198,305246..305735,305801..305920, 307734..>307780)) /gene="Cre-cpna-5" /locus_tag="CRE_04121" /product="CRE-CPNA-5 protein" /db_xref="WormBase:WBGene00057668" CDS complement(join(303365..303436,303484..303608, 303659..303842,303887..304168,304215..304421, 304473..304548,304592..304726,304778..304860, 304911..305198,305246..305735,305801..305920, 307734..307780)) /gene="Cre-cpna-5" /locus_tag="CRE_04121" /note="contains similarity to Pfam domain PF07002 Copine; contains similarity to Interpro domain IPR010734 (Copine); coded for by the following C. remanei cDNAs: DY525144" /codon_start=1 /product="CRE-CPNA-5 protein" /protein_id="EFP05119.1" /db_xref="InterPro:IPR010734" /db_xref="PFAM:PF07002" /db_xref="WormBase:CRE04121" /db_xref="WormBase:WBGene00057668" /translation="MMVPRLQLKPLAVGNGRSQSIAGVRVSPRISVAPSCIGSKHGVN MSNTIEISITIHDFATTETAKEIICELYENETESEENWSKVGTSSPVRFSRNIVFPEK FSYQYVFEKTQLVKAVFSRCYDRNKPSSSSSDILATSIFKVDELIGSFGLQLRRQLQK TGNIATALSGTLRQSDEYLGGIIVSAEMPEKEQPIVVQFHGKSLDRKDFLWDETAVFF RVFRLEEGKDDDSLVFLYESEALKNHSHPQWAEFRLDTQDAADNRNRLLEIWVMYKDV DGKEGYIGKFLTTYAKMKYGPGSDNVYSVINDVKKAQKKSYENSGKMELVKFTDVSFY SFLDYIVSGTQLHFEIGVDFSTPEPVHELDQRRFDGELHMAIRAIGSIIRDYTPNRLF AAFGIGAKIPPTFHESNEFFLNFSMDPICRGLDGVMEAYRKTQSMVTPLKESKLSPVI NYVTRMSHRSGFRGLHYHVLALFTRGEVTDLKEIQQALNSASDAPLSILIIGMGDFDF TPLQKLCSKRKDGRRDVVQFIHLKSLLNGAEAPWLNKSRIAETALRNVPHHMVQYMHN ANIAAKPPIQVCRSPLFHSSSLIPDKPTEFDFELTKDNRHVGIEIPSLMPNLILPPDL SPRPRQDRRGSDTQYLDIETMRGSLTVRVPERCHSVLQTSREQYQRRLKERGLARMKF PRVELSTLESSGGSTQDSSL" gene complement(<308977..>309078) /locus_tag="CRE_04122" /db_xref="WormBase:WBGene00084317" mRNA complement(<308977..>309078) /locus_tag="CRE_04122" /product="hypothetical protein" /db_xref="WormBase:CRE04122" /db_xref="WormBase:WBGene00084317" CDS complement(308977..309078) /locus_tag="CRE_04122" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05211.1" /db_xref="WormBase:CRE04122" /db_xref="WormBase:WBGene00084317" /translation="MTNSAIALPPTRINRRRSTKALHDFFSRPFTQR" gene <315345..>342590 /gene="Cre-cpna-2" /locus_tag="CRE_04051" /db_xref="WormBase:WBGene00057669" mRNA join(<315345..315612,315690..315856,316408..316856, 316910..317192,317369..317492,317536..317982, 318052..318146,318193..318312,318359..318427, 318475..318543,318588..320120,320169..320301, 320684..320950,321618..337957,338718..>342590) /gene="Cre-cpna-2" /locus_tag="CRE_04051" /product="CRE-CPNA-2 protein" /db_xref="WormBase:WBGene00057669" CDS join(315345..315612,315690..315856,316408..316856, 316910..317192,317369..317492,317536..317982, 318052..318146,318193..318312,318359..318427, 318475..318543,318588..320120,320169..320301, 320684..320950,321618..337957,338718..342590) /gene="Cre-cpna-2" /locus_tag="CRE_04051" /note="contains similarity to Interpro domain IPR002016 (Haem peroxidase, plant/fungal/bacterial)" /codon_start=1 /product="CRE-CPNA-2 protein" /protein_id="EFP05191.1" /db_xref="InterPro:IPR002016" /db_xref="WormBase:CRE04051" /db_xref="WormBase:WBGene00057669" /translation="MNDYEIRDLPGSSMTSSCHQKQSNYSGQEVSSDGASDELISESD DTSSSSKSVSTPLTETENHLSGGGFVAKDLLSSPTILLPQTAIRTCTDIDTNNRSKDD YSILTSFLYSSCNIFLNSIIPDPLDLFAAAVGQSTAQALLVAQIGWMVCVCCRCCLCK CVTGGREVRGQKKQLQEPTIADDDGRDLPYEVPGLIHIPKPVYGKKLSKSRSSSVPHV AVPSLVSSSSNYKRMSMWETSLNVQSDVEPLHTPPLVVERKLDYIDKEGNNPSCCREK GKRKPGFRPLRGSGSPSPPDTLTSTKVAVTSASEVKKIKDHKKELKKEKEKKKKMDRK QASSGGGFFTRWFGGSGSNTSQQNLSEDVIDARSERKTAKQREQELLQRSERRSGGRT HSHEEYRRHQQPNLMVNTNLDDDDYATIDRDRRSNNREMSMPASPRNVHFVDESSGPL SRTMNESAFGDRAHLQYRPRAQKGATGPTTRGAPTSSVTKLDEATLDLLRLSTEPSPV PSRRALPKSASLSSVQQKQPIKTIDGGQLRVGNVYTWDQNSVDTATDDGRDFNRGDRS SRLSPQAERRNERQIQIQQRSASSGPSNRRETEIEYEEKRQGPPVVRTTVEGKLKMEK IVGADLITVDSCISSAWTVRDTVTNYKIKSTIGKKSLILEEMKDGQSKYKITLIENGE TKMEREANLDVPDFVNKKDYLAEVSKKLLSDLREDSESVSALTHIEVEVVEDVTNILK TYVIGERADDVLAEEQLRLHFEQTADKTPSPIPLEKVEKIYVDELQKDKIELEDPKKA DIHLIKDGHHFEGEGALRRIRRFETEESIENPTVIRMEPRCAHAFADCDVAKKEDTSN YTVRIAVPLVHTITFLLKQSKMMRQQKAAGYEMEQEGQRFEDETTLRRIKRYETEEEE EKHVAVVQHVEEVKVATMKTQREVEAEGGQYEMSQEGIHLRGEVAFKKRGKHLDSESS EERFMEREAEGGQYAMQMEGERLLGEKKFRSKGRHYESESEESMASWNGGSPTLVDLV KKESSSIFEATFETANNHSPIVTEIRRPKLKKENTTIGCTIANQKATSASAELTTKHV NIQKETGKFRELAEEQAMMLCGFENQKSSKEEVSTIRQQKNKSEIVFTAGSAETENTT LSTTIFHDADSFAVEGSSKSANSTATYGRFKEMSEENASNMVYLQKSESSSSNLSGTE ARMKHGQRQSSEASFTEFKQVAESCAVMIKNTGIERGSTSSTVAEAATDLRIRRKDAR GEITVFVLFKKVFGNYVHASMRLASSGGLREIRETRSSEKKSSSIMQQEQHQHREESH YAQSSYEHTSEHYSHSSFYHQERDENGLEPEVQQVSKQLSSIEKQLLKLDDVVVGAEG TDVVEVKVTIKKREQHANQLIVVLEEPYENAISEGIKQVKKSVVDTSLESRVRKLEQT SSYSIIKKSSSKESVVHTGKPPLERQASLEGRFKMEESWSAVECRKRSASIDRAALNL RASQEEVCTGFWNTTKGESTRRTLLQKAKSTESMSLKTKSASFTNIEMSSQQQKSAVT RSTSTEIASHRREIVAAAFGITTNSLERLLNFVEDIDWESITMMESQKERLSVNLQAL TSSPVVLDIPSVLGRIVAPPEQEENFDLILRDRAESRVFAQLRASADEMTTREVSLGS MSQLEQAAFMSLLITSASRCDLRTIAPRNISSTTEIFYDVAEEKMRTSGVMRRESRRE YESKKFTSSREEIVQGFWKGERDSERVVKTLKDQMETFKQSLTVRSAKYISETSTLGM RKADQKSETTRSQKLTPKEIVSQVFGVSESKTDQFFQVLEKMDWSKIEFGEKEHSAIS ANIRSLAPEQTICDGILGKLRAPKQQDESTDVKLIEIRKASFVLSVRAALQSTISSNS NFCKNISDTEKAVFSNLISVMASHNLSTIGTSSESTTASINYQDIPESLSASKILISK NLDNLRIEIREPVVEAVESFWETTNDQEKIAILMNEKIESIYSSLNTLAASMANEEIS KDLVKEAETSGEVSVKSISPREVVSSSFQISKSDIQQFFNIMEKMDWSQINLPVPEHS IISKNVQCLAPSSYECSNILGKLKAPKMEEQSADLKIRQAQQSKVVLDVTAAMKNTIN STETFSKIPEQEKATFTNFVGIISTQDLSTMGTSSVSQTVQVNYSEAQEQLEASRKLV AKNLTILKSEIRESSEEVVQGFWNTASEQEKVGAIVCEKLKSIHHSLQTHAIRTVTES LSHDIRKEHQSLVGHHYVKLSSREVVQAAFGISSESVDQLLSLIENIDWSEINLAESV HSNISANVRALASTSAQSSGILEKLIAPKTEDASVNKEFRHLNTAKCVLNVISSFNSS VTSDSSLHRISEEEQAIFSNIIGVMASNNLTTSSESTSSSFGFNNVFELSEARRVLKQ TNQQSLTEKIRESSEELFHGIWNTANEQEKVAIVVKERLETVHQSMKTLAIQMATLSV NRELAGNEENLASFRSVVLPTREVVQAAFGISNENVQQVLEVLAKVEWSNILLPEKEH RILTKNIKALAEPNFNCDSILGQLNTPEQESESADMLLNQKRKASIVVHVKSAVESAI SSDSVFVKLPSEEKAVITNMAGLVVSNDLTSLCSSSETFGFQQRITRNQNANILLCSK NSQSLLQRLREPIENQIQGFWNTASSQGKSSLVVKQKLDTMYETLKTIASQMISETVN QNIKASEPDAESIKVIDKAAREIVTAEFGVRSESVQTALEVLSKIEWNAISLPEKIHQ TISRNVRVLAEPTFNCDSILGTLNPPESQEASTDKSFADSRIIEVVSRINSAVESVIS NDSELRKLPAEEKAVITKIARLVVSNDLTSMTSTSNSFGYKQTVSAPQSTEILLGTPE SMYLQQHLREPVEERIQGFWSTSSPQEKTSFVVKQKLHFKYDAMKMLAMQIASESVET ELKGAENNVELMKNLGSSTKEIISSAFGITSETVQNALETLSKIEWTDISLQEKEQQT VSQNIKVLAEPNFDCDSILGKLSAPEPQSGTTEKKFVEQRNIYLVSNVKSAVQSVISR DATLQKLPENEKSAIIKVSEIIVSSDLTSMSSSSSDFKLLQQSSEQGNVDFLLKSPNS QTLIEHLREPIENQIQGFWNTASSQGKSSLVVKQKLDTMYETLKTIASQMISETVNQN IKASEADAESIKVIDKAAREIVTAEFGVRSESVQTVLEVLRKIEWNEISLPEKIHQTI SRNVRVLAEPTFNCDSILGILNPPESQEASTEKSFADSRIIEVVSRIKSAVESVISND SELQKLSAEEKAVITKIARLVVSNDLTSMTSTLSSFGLKQNSSDLQNTEILLGTPESM YLQQHLREPVEERIQGFWSTSSPQEKTSFVVKQKLHFKYDAMKMLAMQVASESVETEL KGAEDNVELMKNFGSSTKEIISSAFGITSETVQNALETLSKIEWTDISLQEKEQQTVS QNIRVLAEPNFDCDSILGKLSAPEPQSGTTEKKFVEQRNIYLVSNVKSAVQSVISRDA TLQKLPENEKSAIIKVSEIIVSNDLTSMSSSSSDFKLHHQSSEQGNVDFLLKSPNSQT MIERLREPIEKQVQGFWSSASSTEKQEMFMKEKIETIHAMLKTFSASLVSETVHRDFM ATAQSLAALHSIRLTPREILCSAFGISNEQMNETFRALNEVHWSEIEIPSSEREHLLA NLRIVNADVPNVFGNLIGRPEENQEISTVLSEKQHVSFLLNLQKTLEQSIDNSSTFSR KNEHSGAQISNVISLITSENLGDLISQAVQLAQPNMSEETMKEFEIPQRILLDRVVPE TTEESIQSFWNTSQLSEATISTIAQKLSTLTSEFVVSAAKQVSTSLTLDYRRKIFNQN SEVIFGDVTRDVVKAAFSVSDETLNQLFFYLEQSDWSQIKLTSRQKAILSANVKYVAT SNLSTLLGHLVSKPEEIEHSEVSMAEKQRVEIENTFKISSILLESSLLSENSEEEKAT LSNLVKLLTSVDLKTAIQKAAFDKKPDSLEANTSITPVMKIQEHVRQPEEHVVQGFWS NDRPQQETVDFVIRKIEVLKSILNCYSVAECRGTMNISEVVKDAFAVSDQTYYKILKV LGSMQSAEIPDTVKETLSKNLQILNLPPVESLINSVQQESSVGKTIRNQQLAQFLFNF KSSVDYEIGITANLSQSSEEEKIVLNNLVAILSSVNLSAIVPENGQLPTSEESVLDFS IQFPETNRSITTTQDYVNVLRHYLQTFAIQRTSTEVNRVIEIIKTSQSFHLVHTTVLE EIKTIQLRMEVLKKVLLNQATAEEILQEAFQSSEQQMEVFQRIIENVHWEETQLTEDI IRNLRINFSAIPNFEGSLGCLTAPEEQQHSVDTCVSSVRRAEAVMNLMAAADNAISTS SCLSMMESDERLLHKTMLKTMAVCDLTAPAASSEIETMTQGFYRKVEEFNTEKQVSEK LMSNAEMEAFETSEEAVHGLWSSRKEKETSQMILQARELEKATLATLASVEEENSIYT ELASFGSKEQIEKLVSIELRDIIENSFGISEQSLDKLLEIVPKMDWSSLTMPITQKDL VVRNLTLLVPAEANTMESVGTIQAPPEEEAFAELDLKQAREAKVMMDIQECVFTTCVG YTEMNKPNDSEVTSFSALLGTMSICDLVTMAASNIQVDSKYDYYRRPAPKAAEVTITG CNADAFSLALQETGEVTSSGIWSTVSTSEAAKTTVSDKIISVSKTQMSTRASSEQVIS HDHELKKDSAETIEKKIPDSLQETLQQNYSIDRSDSNVQIQGATASESFEVKYPESRD DTVSQTMRSQSQKDLQFGGTFGDLQPPLPQEEDTEMTIRQSRLYRSSSQVRAPSEESI HRTEALRRSESLESNARKTFVEKRRDSISMSQKASVERETSMEARVSRPEVSVPVESL QKTKPKELTSTSIAESKDLNVCGSWTTAKPPIGAKVSLQTKKVQKEVTSATMTVASAS VNCEVGLESKRAQSGDATGSLVRAKSIEEVEREFGVEVASTEKILEKREQIESWIKSL PQSMEVEETAEFGDDEVKIGGVMGVLNAPKEHDEEVESSLVMKRAASEVRNLKAATKE SIDESDEFSRIEADQEIHTVQKEMVKEKGSFNAAASMEISATAKLEYTKTPSEDVTEL SMTESRRQSNVGQFHESKEEEFVGLWNTVAKGQSASMILPHKPPIDTASIKAKAAREN SIEMTGSLQKSPSAEALGVMTQKVKMGADSKFGIAQGAADTTLTLSDQTGATSHNINI SNTGTAIGTVNQFSNKETGVGFGASCLVPPNPEFAEIEFTEKVVPITQASLSKLAAGD SVAAVESKIFGTGETEADSSLLTKVASTETIGKTLQASKDSVVTLEAKQSRDAVSDEK SDLNLKTANLESQKLKLAETKEEESGVFIRSSHEYEETQKTLRHRSTSRESASRTVTA PTSQEVLVNFDRKVEESVAEGSLSIGIVRESSQSEVLKHTERTSDLTKSFMSEEVAGV RAVSETRAEEFRGRQQGDVEVQTGTAMGRIEAPRPQREETETTQKLKRTLSVERNAKA IETAESQMTANIQKREDSLTSEYSTRDNLLLKSSSVSHVAIQQMTEHLVMRSKSEHHI TEKLQEILCEKESFSSQEFITENQGIHTHWDVIDNNGEALICWKSAEIEQKSLDAKQV TESTAGTTLDLSVRLPGGKDEEKIAEHVVVGISEALSVSETRADMEMTRQDAFSDDAT YVASDILEEHSLSTVHEFGESEASTTFGIGKLVSKKPEKEEVGRSFSETRKASQFSDV AAISELTTEMDSEILRLPECDQSVKLLTSKTEQKDSKDLKATIETSAGKDVSLEKRDD REQSIDVKKVDKRSIADGKRLSEPRNENALSKYTSEIVDLEEKKIVPLTRTDSASMIL KAPQTNRTDREISIDRGEANRMASKNIMQRGMSRASEERRFQIQMTKSEKMLKREDSF DESEFVTSVSLRDEVTSGTFHEYGDASVEVCTLFGKIVQKKFEVEDFEEVLPMIRRWA EVLSMKASTSVDIQADNSISKPDSQAESRKNLRTANVENHRINVNAIQEEVMDSTTAF QCKKTGEDVASIRLRDKSRERVEKKYQENQWNLLSTSAEWETLLNDLEESVTIAQSVQ DSMAFSAKASATVNLNSEALIKKTESAFGIQKSISQSNVDKTVGQFSSANVENELLVT KLGMDLEEIEKLVDEINREQAVGGRIREFGKSETGGGIYLVRRALPKVKETSTHTVTV ATSFRQIFSTMSAGDEISEANVELTIPSSSVGAEFQSSVARSDSMTFTTNHASEYTAS TVADYARDIAVSASTAARKKAIPVERSSQKLKEVGSDGIEILSLWEGIETDLDASTQL VDLLRVKSSLQTIESSEEVERINQYLEMPEEKGLVIHLINIQNKEICERNFSVSICSL DTALSREFDIPSSYSVSKVLTDKRVLREIWRVIESGYVRFNAVINLHRYSLSKPTLAQ ETVLRDVVRIAAQPLFISAGDIESDVVWSTHQLEKAAVREETNRTIIGARKGENIKKK LEESGDEKVKLKVELIGGNQPNEFCEKSWKIPRFGDKVKLDAEEFELDECLFYGQINC KQTHFEDKDLVVNIPRVTSLQLTTLASKEETKEVHEAWSIPDQFEVADRLIIISNIGE PTYMRTKESTEDIVGVGIAYNVSEENLTSSIKIKDKASGGSYELTTKAAGDEYKAISS SLSRTQDVEKVKGKMVQKVIAKEEIRVLETTTESVNANVNYEIPEDNVKIGVTKTCAN NAAPFTVRLHECLDFYFVEATRNPEFNRPSEFSDLEKTVIDFNRIEGTSLNTFEPTTL KITLSTVLNRENEYFRTEHIVKDKNRGASLKFRFIESREEKQTIFSAFEVDAENEKIE RTIDLVRQEGHYKLSTDAAEDNEITLHREISKPLITHYDTLHQITLSNSAPHQMLSTT GASQDLQNISVQLSRPTEWLSTELLIVDKNVEQPVTWRVLECEECVENLHPIYRRPDD IFDLDETWYIARNGGKFEQRCKASGDEKEVLDQEIRSRGIKDDVIDKKFIVGNQGEPI SFNTIQTSSIVASISQDMSRLGEKETVKKVLRNSNKGINVEKKMIEATEMRQTISEQF RRNDDFDKADLLIKDRRLGGCYELSTNASEQSSSSISTALICPRPSHLSTEKTFITAQ TIIPAVLNCNASESIGHTVTEHWNRPNDHFAISKIITDCNKENEQFTFREAGEEYHTT NCFYTREQEEKVVAKTLLEARQGSGQTFETKHATDRSMDAVQHLEKERLAEAHAEKLF VIGNTSQPVSWTTRASSEMQHNQVVTLNRPSPYHQVEIIRQGANLGIPTYFNARETTS KIENVATQLSRKEEKLEVETTKTTPFLAEPVVFDSNASKSHSVSLDKNFTASGDSELD AVVVIVDKNSEQPQFFRCSCTKEASTSAAASLSAGSKSESCKLVRVSSNLGHPTSLVL RESSSVQETNNVHYQRDEHHEHISETKPWPRDGGSFKLETKASTANEVRLDKDLEKKS DRELETERKTIIRNEEKPVEIFVSATEESAAGVSANLSRANQYETTNITLTAANKGEP AYSRVTETTELTETNNVQLRREEEHQDTEKIVQIPASGGSTLLRAGFADEKFADIDAK LARDSEFQSTQVIRQIGNQDKTNLSIGASQETSVDFDETIKCNKSSSEETFVTKVAKN IEPHVIFRSTEASDMAVGIHYTLRSSDKVDETEEIKNVARNGGSATFSCFASGEESPD SVSAFLTRQPQEEITEKLFPTPMLDSIKFNSTAAEEFAVWNTTSFRRKDHEEEIEKVF NTSETGQNESFTSKAAEDISITLDADLHFGVGYKEHRQITKDEANQGEGTGMHSGASE ETIFNLGYDYCKQPTEFTTVCVTEDKLLIQGAYGFRAAKEESITLDADLHFGVTYRDL LAMGLHASNNEIEGTGMRSTASEETVFNLAYDYCKQPTEFRTLFISEDHQFVHGAFGF RAVGEEHIETQVLELEARMVEVMVEGSVHNVARRHEDEPFVLYTEVLEETIIRVDEQL EKKTTVIETEQASEVKMREKGEERRKEEKR" gap 338119..338632 /estimated_length=514 gene <342722..>344353 /gene="Cre-tag-308" /locus_tag="CRE_04052" /db_xref="WormBase:WBGene00084319" mRNA join(<342722..342734,342797..343047,343400..343531, 343578..343728,343775..343849,343898..344033, 344086..344185,344234..>344353) /gene="Cre-tag-308" /locus_tag="CRE_04052" /product="CRE-TAG-308 protein" /db_xref="WormBase:WBGene00084319" CDS join(342722..342734,342797..343047,343400..343531, 343578..343728,343775..343849,343898..344033, 344086..344185,344234..344353) /gene="Cre-tag-308" /locus_tag="CRE_04052" /note="contains similarity to Pfam domain PF07002 Copine; contains similarity to Interpro domains IPR010734 (Copine), IPR002035 (von Willebrand factor, type A); coded for by the following C. remanei cDNAs: DT933298" /codon_start=1 /product="CRE-TAG-308 protein" /protein_id="EFP05231.1" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR010734" /db_xref="PFAM:PF07002" /db_xref="WormBase:CRE04052" /db_xref="WormBase:WBGene00084319" /translation="MHFLSGTSLPKAINHQEANEEGERKTWQRSSSECCSCFVCFYIY SGSNFRISSKPVRRNSLLQALAIGSPHNIPHFKTLDDIVKAIKHAGLEYSNLIFGIDY TKSNFYQGERTFDKRPLHTIDPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEF TDQGIFNIADRYDLDKDCNGFEEVLRVYNEVTPSIEMSGPTNFVPLIDRAIEICKEKH SYHILVIVADGQVTNEKINQKAIAAASHYPLSIIMVGVGDGPWNMMGRFDDNIPKRLF DNFHFVDFHKVMFNAPNADASFALNALMEIPDQYKAIKELGLLKHSRRS" gene complement(<344742..>345272) /gene="Cre-trx-1" /locus_tag="CRE_04123" /db_xref="WormBase:WBGene00057670" mRNA complement(join(<344742..344813,344867..344938, 345015..345176,345231..>345272)) /gene="Cre-trx-1" /locus_tag="CRE_04123" /product="CRE-TRX-1 protein" /db_xref="WormBase:WBGene00057670" CDS complement(join(344742..344813,344867..344938, 345015..345176,345231..345272)) /gene="Cre-trx-1" /locus_tag="CRE_04123" /note="contains similarity to Pfam domain PF00085 Thioredoxin; contains similarity to Interpro domains IPR015467 (Thioredoxin family), IPR012335 (Thioredoxin fold), IPR013766 (Thioredoxin domain), IPR006662 (Thioredoxin-related)" /codon_start=1 /product="CRE-TRX-1 protein" /protein_id="EFP05151.1" /db_xref="InterPro:IPR006662" /db_xref="InterPro:IPR012335" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR015467" /db_xref="PFAM:PF00085" /db_xref="WormBase:CRE04123" /db_xref="WormBase:WBGene00057670" /translation="MSLAKEPILELTDLSEFEHLIRQHPEKTIILDFFATWCGPCKAI APLYKELATEYKGVIFCKVDVDEAEDLCAKYDVKMMPTFIFTKNGETVETLEGGVEEE LRRKVREHSTPAQ" gene complement(<345889..>346877) /locus_tag="CRE_04124" /db_xref="WormBase:WBGene00057671" mRNA complement(join(<345889..346512,346560..346727, 346776..>346877)) /locus_tag="CRE_04124" /product="hypothetical protein" /db_xref="WormBase:CRE04124" /db_xref="WormBase:WBGene00057671" CDS complement(join(345889..346512,346560..346727, 346776..346877)) /locus_tag="CRE_04124" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05163.1" /db_xref="WormBase:CRE04124" /db_xref="WormBase:WBGene00057671" /translation="MDSDWESTFEIVSESDEIRKRVNVEKEEEATVNVKDINDEVTKE SSDTIKTIRRNTKNERVLCEIAAITCFFGTLIIVWLTDIIGLSMTEDFLRDQPNIAKE MMIKTEADKVLQSRVAEFAVKLKMGGRNNRKPRESQEDTLFYLLSEKEPIELAFRRKW MADPSFFEGVDEFVYGMDWENTFEEDLFVRGVPNFDHQFELEEMTLKTTLLNQNYDQK FFNFGRKEMIDKTYSVEYFVSQRTLVKLEKKNGVEVSRTEYFLKLGDLYVYDKRGNLE CTRVYYAPTIGKELMNKVEKQ" gene <347618..>348438 /locus_tag="CRE_04053" /db_xref="WormBase:WBGene00057672" mRNA join(<347618..347765,347811..347890,347936..347996, 348041..>348438) /locus_tag="CRE_04053" /product="hypothetical protein" /db_xref="WormBase:CRE04053" /db_xref="WormBase:WBGene00057672" CDS join(347618..347765,347811..347890,347936..347996, 348041..348438) /locus_tag="CRE_04053" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05152.1" /db_xref="WormBase:CRE04053" /db_xref="WormBase:WBGene00057672" /translation="MFRFLLHFLVLFWFTVGAIISPMTASPKVENVSSVTIPKIPMRP NGFVAGRDSKKLAIQRFKLLVSDFLTDAQLSKSIDVAAVGMHKGKPLDDIIDDVYARL RRNLTTKQISQLAKAQKGLVEDLDEKSAKLVKARVKRMIVYSFDPAAEQIHKFATRPS MAFALIAETINERFVGSVKDLIRDVLTPKEYEIFRKHYHPTIFKLDNDNKSMEIVNMT TPKMFQSLIW" gene complement(<348535..>350152) /locus_tag="CRE_04125" /db_xref="WormBase:WBGene00057673" mRNA complement(join(<348535..348653,348732..348810, 348857..349003,349023..349352,349396..349642, 349694..349980,350045..>350152)) /locus_tag="CRE_04125" /product="hypothetical protein" /db_xref="WormBase:CRE04125" /db_xref="WormBase:WBGene00057673" CDS complement(join(348535..348653,348732..348810, 348857..349003,349023..349352,349396..349642, 349694..349980,350045..350152)) /locus_tag="CRE_04125" /note="contains similarity to Pfam domains PF00664 (ABC transporter transmembrane region), PF00005 (ABC transporter); contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR011527 (ABC transporter, transmembrane region, type 1), IPR001140 (ABC transporter, transmembrane region), IPR003593 (AAA+ ATPase, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05237.1" /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="PFAM:PF00005" /db_xref="PFAM:PF00664" /db_xref="WormBase:CRE04125" /db_xref="WormBase:WBGene00057673" /translation="MDEKDVRSYTVTTSVDCDTASSTDFVCYKSFTFLSLKRGEKDSA KAEEPSRLAIEAIEQHRTVQYLTRENHFIQKFDDGMRLIHSRNLQRGILQSLSYALTV SYTFLNFAIGYRYGVYLVSANVTSPFTIFQVIESLNSASPSLLAFGTYLPEYVRARVS AGLLFEMLRERPRIDNSSVDGKKLLLDGDISLNNVYFGYQVSGRKMILNDFSLKIERG KTTAIVGASGCGKSTVIQLLERFYDPIAGNINYDRECLRDLNLRYLRSQISLVGQQPT LFNYSIRENIGYGLEKITEDEIIAAAKQAHAHEFIIKMPQVKNTRIILGYDTVVGERG NKLSGGQKQRIAIARAIVRKPKILILDEATSALDVESEKLVQEALERAKEGRTCVVIA HRLSTIRGADTVVAVVKNGKVIEQGTHQKLLALGGEYANFVQKTLL" gene complement(<351492..>352584) /locus_tag="CRE_04126" /db_xref="WormBase:WBGene00057674" mRNA complement(join(<351492..351770,351820..351972, 352019..352121,352165..352258,352304..352414, 352467..>352584)) /locus_tag="CRE_04126" /product="hypothetical protein" /db_xref="WormBase:CRE04126" /db_xref="WormBase:WBGene00057674" CDS complement(join(351492..351770,351820..351972, 352019..352121,352165..352258,352304..352414, 352467..352584)) /locus_tag="CRE_04126" /note="contains similarity to Pfam domain PF00896 Phosphorylase family 2; contains similarity to Interpro domains IPR010044 (Methylthioadenosine phosphorylase), IPR001369 (Purine phosphorylase, family 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05200.1" /db_xref="InterPro:IPR001369" /db_xref="InterPro:IPR010044" /db_xref="PFAM:PF00896" /db_xref="WormBase:CRE04126" /db_xref="WormBase:WBGene00057674" /translation="MVKVGIIGGSGLEDPNILINPQTVSVDTPYGKPSDHLVEGTING VECVLLARHGRKHDIMPGNVNYRANLWALYSLGVDVIIASTACGSLQENVEPGQLLFP DSVFDRTNSRKSTFFDGTYSQAPGVCHIQSHPTYNEKLRQVLISTAEKCQLVHHRTGF GVCIEGPRFSTKAESMVFKSWGASLVNMTMMPECILAKELGIPYATTALVTDYDCWKE EDHVTASSVMKVFAANVEKAKTLFVEAVAEIGKIDWSAEILKMKTEARESIMISPDVV IPFLTVRQS" gene complement(<353181..>354969) /locus_tag="CRE_04127" /db_xref="WormBase:WBGene00057675" mRNA complement(join(<353181..353234,353282..353454, 353502..353683,353724..353813,353878..353972, 354020..354072,354118..354239,354285..354532, 354577..>354969)) /locus_tag="CRE_04127" /product="hypothetical protein" /db_xref="WormBase:CRE04127" /db_xref="WormBase:WBGene00057675" CDS complement(join(353181..353234,353282..353454, 353502..353683,353724..353813,353878..353972, 354020..354072,354118..354239,354285..354532, 354577..354969)) /locus_tag="CRE_04127" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05131.1" /db_xref="WormBase:CRE04127" /db_xref="WormBase:WBGene00057675" /translation="MRLFVFSTFLFFVGGAHGFFDSIEEDNAPSYFINNFYNNEIPDM NSETVSKPRRLVASEGMPKAAEEMMTRFNRNFLNLLTSENQNNWNQLMEMISPSAYIE TCMEPAFGLSIDQFHKWMTHLSRLYSKFELTNSVMEDNSITDITTKLIIRTETRGNVV GADQWTMSASLDSEKGYFVVNTLKMMNDCKSIPTSPPLEPANPFETFISRLKTKLVSD IFLNGGIRYKSLYESLNTYLDPKSEIQACDVGKLSLNQFVEYWYKRYGKVQTYTNHKF EVVKKGTELWIDFAVTYQGESGTVFQDKIRIILNISRLLWIGTLYEFNKIARRIRQRK MSKHDEAQAKLDLSSRRWDQLFHPDISWDTQQAFKELFDQNTFHGYACNACGACNDLG TFQDFGNWLGDQAKFYSNSVPIETRVYAAEEKIGFYAVNTLTARADNSTSNRRVYFEG FYKDDHWQLNHLGFSCNDK" gene complement(<355615..>357320) /locus_tag="CRE_04128" /db_xref="WormBase:WBGene00057676" mRNA complement(join(<355615..355871,355916..356171, 356220..356336,356387..356439,356487..356611, 356658..356908,356955..>357320)) /locus_tag="CRE_04128" /product="hypothetical protein" /db_xref="WormBase:CRE04128" /db_xref="WormBase:WBGene00057676" CDS complement(join(355615..355871,355916..356171, 356220..356336,356387..356439,356487..356611, 356658..356908,356955..357320)) /locus_tag="CRE_04128" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05234.1" /db_xref="WormBase:CRE04128" /db_xref="WormBase:WBGene00057676" /translation="MCRLYLLFFLFLSTSASDFFDFDWDSPYESTEDVRYLGRDDGRT PSERGAHEPSTQYLMNERFKEDMLAVLQKRSRAHFDDLARYFNPNIQIQSCFASGKNL NADQLYQLMIHLSAYYRVWSNVEFETRDLAGPKYAFAIMRHNATIHDGSQIAGKWKYE ASFNRLWNSFLIDHLTFVGSCRGIPQTAPQDPLEDPDHFVERVRTKLVSDLFLPYGYF KKLENFEDFGDWITEAAQFVVCDEPKMNKKEFIKFMAERYHGIRRYSDNVFNYTKNQQ NIEITFSTTWEAPNTTLYRDTYTFRVKKEEDYVPQLDNSFSYWRIYWVTKKCTVDRTR HPAILDGANNLMEVNKRFCGMIDGENWDVFQSFLDLFDPKDTKWGACVGARDLGYDKL REHMEKVAMRYAKCVVTQVNIRNLIRAEFATTFTMSRARDIQEQEEVDVGFSGFKDKD GYWRMNRMYFLCDETTQKRKFIEL" gene complement(<357480..>358694) /locus_tag="CRE_04129" /db_xref="WormBase:WBGene00057677" mRNA complement(join(<357480..357773,357821..358048, 358095..358294,358327..358472,358519..>358694)) /locus_tag="CRE_04129" /product="hypothetical protein" /db_xref="WormBase:CRE04129" /db_xref="WormBase:WBGene00057677" CDS complement(join(357480..357773,357821..358048, 358095..358294,358327..358472,358519..358694)) /locus_tag="CRE_04129" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05161.1" /db_xref="InterPro:IPR003002" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE04129" /db_xref="WormBase:WBGene00057677" /translation="MSCNQEVSLLENPSFFRNLCFLLTVSEVGITSYTLYLLVFHSPS QMKEMKWYLINMACWTRAMDLMYSLFVIPYFFIPTLVVLPVGVFSLIGVPTQIQLLML VIIITVTTSGLGSAVVMIFENRFNAIAPPHFRFKIHWRKSFHSVMFLISFSLLISSFM KLEDQNTAKNAYSEYFLCPIPQFFTTAFSFKPVSVPLLITTVLLFSLLILVQVITFAC LSFYFLFSLEKSKMSQATRNLQRKFFLTAWLQILTHLAVIVMPMGYTFFSFLLRYRNQ SMFKIVFPKEELYFSSRQSVHNINHISWDHYFYFNNFHQPSIQKSCQIVDVSKETSKP KKQHKPECFNGFF" gene complement(<359081..>364146) /locus_tag="CRE_04130" /db_xref="WormBase:WBGene00065152" mRNA complement(join(<359081..359104,359149..359227, 359275..359400,359447..359532,359577..359649, 359950..360011,360220..360294,360344..360460, 361627..361733,363726..363854,363902..363993, 364040..>364146)) /locus_tag="CRE_04130" /product="hypothetical protein" /db_xref="WormBase:CRE04130" /db_xref="WormBase:WBGene00065152" CDS complement(join(359081..359104,359149..359227, 359275..359400,359447..359532,359577..359649, 359950..360011,360220..360294,360344..360460, 361627..361733,363726..363854,363902..363993, 364040..364146)) /locus_tag="CRE_04130" /note="contains similarity to Cricetulus griseus Protein FAM21.; SW:Q91Y25" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05148.1" /db_xref="WormBase:CRE04130" /db_xref="WormBase:WBGene00065152" /translation="MPIPFSVISTTSEDVLEGNNSDEETETFDVNWISARNHSFPQSM VLELEEESLVSSVKVTVHKDYPPSSLTVSLGIPSNHFRNSRGKSYNADYSVRQELSFK DDFHLEYGEIPPIDSHFKDEPKQKTMSFVELDRGILLPLKAKPKMRETKTIVGLYDTD SEDEEILFSKEMLNRLRKREASMKNPQLPSSSAVTEAITVDTNSEKSAPESSSSSSSK PQSSVSPPLSDRSKKQILDEILGIDEKGNKRKPRKEVYFGSRMAEFNNMLRLLERKRE ESIWDEKYAQASAIDESVKDLKAREAGLRELIIEREDALKGKNLILAQRSKDRFDKNM SDALHLPTIRGFLSEEELKRLKIE" gene <365143..>366370 /locus_tag="CRE_04054" /db_xref="WormBase:WBGene00057680" mRNA join(<365143..365229,365271..365789,365840..366022, 366067..366225,366275..>366370) /locus_tag="CRE_04054" /product="hypothetical protein" /db_xref="WormBase:CRE04054" /db_xref="WormBase:WBGene00057680" CDS join(365143..365229,365271..365789,365840..366022, 366067..366225,366275..366370) /locus_tag="CRE_04054" /note="contains similarity to Pfam domain PF00560 Leucine Rich Repeat; contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR000875 (Cecropin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05201.1" /db_xref="InterPro:IPR000875" /db_xref="InterPro:IPR001611" /db_xref="PFAM:PF00560" /db_xref="WormBase:CRE04054" /db_xref="WormBase:WBGene00057680" /translation="MNVTSVTSEDGVKEYEKIVVEPEEIEYVEIASDAKVVDLTRHRL KEIGDYSWLTHVEQFYLRWNLIKKIENLDCLTTLTHLEFYDNQIAKVENLDALVNLEV LDLSFNRIMKIENLEKLTKLKTLYFVHNKITKIEGLDMLTELEYLELGDNRITKIENL DNNLKLDRLFLGANQIRNIENLEHLKNLTVLSLPANAITVVDNVAGLTKLKEIYLAQN GIKYFFGLDENLPLEILDLNQNRLEKVENIHQLSTLTDFWARGNKLSDWNILDELIRL PQLSCVYLDNNPIADSDTYRGKVVRFLPQIHRLDGTQCREKSILRPPKIEKTAVETAA VEFEHPTEESQVV" gene complement(<366676..>370017) /locus_tag="CRE_04131" /db_xref="WormBase:WBGene00057681" mRNA complement(join(<366676..366829,366873..367027, 367080..368276,368361..368733,368781..368855, 369935..>370017)) /locus_tag="CRE_04131" /product="hypothetical protein" /db_xref="WormBase:CRE04131" /db_xref="WormBase:WBGene00057681" CDS complement(join(366676..366829,366873..367027, 367080..368276,368361..368733,368781..368855, 369935..370017)) /locus_tag="CRE_04131" /note="contains similarity to Pfam domain PF02219 Methylenetetrahydrofolate reductase; contains similarity to Interpro domains IPR003171 (Methylenetetrahydrofolate reductase), IPR004621 (Eukaryotic-type methylenetetrahydrofolate reductase); coded for by the following C. remanei cDNAs: DR779441, DT935454, DR779254, DY524637, DR780559" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05157.1" /db_xref="InterPro:IPR003171" /db_xref="InterPro:IPR004621" /db_xref="PFAM:PF02219" /db_xref="WormBase:CRE04131" /db_xref="WormBase:WBGene00057681" /translation="MTNAGGTHVAETQETIKKIDSLSTMPYCGIDTDDNTGVEERATL ETGKSWSPKHYELLHERIERLIDEKQPFFSLEFFPPRFVNGVPNFLERVERLSEGGSV FVDMTWHMGSDPANIDKVTSSSSIAASMLDYCGVDTMLHMTCVQYNKADTLKHLEQAK AMGLRSILALRGDLPPGTELQDTHQFRALDMIRWIREEYGSYFSIGCAGYPLGHPQAP SYKADLMYLKAKCDAGANFVITQLFFEPETFEKFVRDCREIGITQPIIPGIMPIMGYE SIKRIATLSQLEIPQHILDDLEPIKHDDDAVQKYGTERCIAMCRRLLDNGSAPSIHLY TMNREGSIREILKALGLWKLEGDRVFPWKNRSQHPIRCLESVRPIYWSFRPRSYITRT RDWDQFPNGRWGNSSSPAFGDVSSYYLSNLTVRFSKCDYSCTITFQTLRNGDDRLSMF GDNIDSIEDVKRVFINYITQTPNAAGKKVTVLPWTEAETGVQPETSLISEQLVWCNEN GILTVNSQPSVNGAPSTDPLVGWGKPGGYCYQKAYLECFMTAELSEKLIQIIQRDFPI RVNYHAIDKDSTFDQTNSEETTPIAVTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMW MAQWGDFYPKESKSYGVIKSIHDTFRLVTLVDNDFQKPSVLFDVLQTALEELRK" gene complement(<371191..>373105) /locus_tag="CRE_04132" /db_xref="WormBase:WBGene00057683" mRNA complement(join(<371191..371374,371424..371574, 371615..371754,371797..371869,371924..372167, 372192..372692,372740..372817,372863..372947, 373008..>373105)) /locus_tag="CRE_04132" /product="hypothetical protein" /db_xref="WormBase:CRE04132" /db_xref="WormBase:WBGene00057683" CDS complement(join(371191..371374,371424..371574, 371615..371754,371797..371869,371924..372167, 372192..372692,372740..372817,372863..372947, 373008..373105)) /locus_tag="CRE_04132" /note="contains similarity to Mus musculus snRNA-activating protein complex subunit 1 (SNAPc subunit 1) (snRNA-sactivating protein complex 43 kDa subunit) (SNAPc 43 kDa subunit)s(Small nuclear RNA-activating complex polypeptide 1).; SW:Q8K0S9" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05186.1" /db_xref="WormBase:CRE04132" /db_xref="WormBase:WBGene00057683" /translation="MNASGVPTPFMGSGIKQDLHLLFNKFSAIESDKIRDFSDVFREL HFETIFHYRLNPIECLEFSEYLLQNAALYFDKYNEIGDSRSLKNKTTMDKNTLPRLFL NQIIATSFRNDCLVYTSVMPCTIYSQSITYARYRKIQIIFEYNFFQIPVTLAQFEELL TFQKILASKKMLEPLAALKSLLLQKAFRLKLFQSMYDPVTHKKYLSEEELPNYSRKPI EPFSRIKQIQSHQAFGELKYIHNMYTKVNRVFQGLSFKRKLGLTDIQLIDKMNPIEEI QKNLEHHEKELQSVKTKEDESNEKLVESAGSSRSALRSKAYSAGLKHTRQRRHLDPNM EENFKHLTFGQIAQECLEEPSSHLGYPSERPVKRKRRPRTFDSEPLEQLDGHAMAEQV LRDEYAARVKPEPEEEEHKFGLKIGKLGTSGVAKIRAPKRTNVKLIQVKTEPVDNHNT PITASQIDASFKSPEKKRPTLQQDVKPKISNEWANKLHAWTGQVEATDKQLKKLKSQI KLEMVDEDE" gene <373365..>374991 /gene="Cre-spdl-1" /locus_tag="CRE_04055" /db_xref="WormBase:WBGene00057684" mRNA join(<373365..373400,373442..373684,373730..374053, 374106..374738,374782..>374991) /gene="Cre-spdl-1" /locus_tag="CRE_04055" /product="CRE-SPDL-1 protein" /db_xref="WormBase:WBGene00057684" CDS join(373365..373400,373442..373684,373730..374053, 374106..374738,374782..374991) /gene="Cre-spdl-1" /locus_tag="CRE_04055" /note="contains similarity to Schistosoma japonicum Myosin (Fragment).; TR:O96398; coded for by the following C. remanei cDNAs: DR780178" /codon_start=1 /product="CRE-SPDL-1 protein" /protein_id="EFP05132.1" /db_xref="WormBase:CRE04055" /db_xref="WormBase:WBGene00057684" /translation="MPDDDEKLQLRADVERYRKAIRQKDDMIEEMENELNHYGKPAIS DGKAEAREKELNGRIRDLQFEMDEKDAAIHDQTDLISSLRSEIEKLEKTNRELINRSE CNESDESNSFVESEMIRISEECEKFKEVASTLYEQNRELKKEAVELREEHDSAMGHVK NLESHIKTNEEEIARLEGEVFDLKNSNQGKHASTGNSIFAEAMEAEQKLEEDLKVLFR EKQSLMSMVKRLTMEKDEAEERARSFMNRGLIVRNAINHIDVEEMRRLSARNRELETE RTHFWERMFIKMKTVPKKEIGAIIVGYFESFKCSIASIKGGFDDLMKKNEQNLTIIRG QNQDLENQRVKIEQLQFDMECLERKLRSAVKAESEDSQLRAPLKPMNNSRPSFFVKPK KTDPVPPLETSMSNMMMTPQKPSPVITARSTAKKEDSSEWAERRLKAKAEKKSATPTP RYNYVTMSAPVPKFKAAVLQMPSTLPESQEN" gene <376098..>376924 /locus_tag="CRE_04056" /db_xref="WormBase:WBGene00084311" mRNA join(<376098..376415,376670..>376924) /locus_tag="CRE_04056" /product="hypothetical protein" /db_xref="WormBase:CRE04056" /db_xref="WormBase:WBGene00084311" CDS join(376098..376415,376670..376924) /locus_tag="CRE_04056" /note="contains similarity to Pfam domains PF01466 (Skp1 family, dimerisation domain), PF03931 (Skp1 family, tetramerisation domain); contains similarity to Interpro domains IPR001232 (SKP1 component), IPR016072 (SKP1 component, dimerisation), IPR016897 (E3 ubiquitin ligase, SCF complex, Skp subunit), IPR011333 (BTB/POZ fold), IPR016073 (SKP1 component, POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05126.1" /db_xref="InterPro:IPR001232" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR016072" /db_xref="InterPro:IPR016073" /db_xref="InterPro:IPR016897" /db_xref="PFAM:PF01466" /db_xref="PFAM:PF03931" /db_xref="WormBase:CRE04056" /db_xref="WormBase:WBGene00084311" /translation="MSCKEPTTSPTPENNITVVSSDGKEFLLDLKLTEQSETLARLIL NFEYDRTDVKKDPVPLGNITSAQMQKIIEWLQHHRYYPKWEQNDIHYSTSFTFETWVE EYLNIPNNEMFELLNAANYLNIPRLFSTICRIMASRITGKSAEQIRTVLNIKTDVKND VYTGIPIQEDSSSSEDGMSEISLSPSPPPI" gene <377404..>377988 /locus_tag="CRE_04057" /db_xref="WormBase:WBGene00057685" mRNA join(<377404..377441,377487..>377988) /locus_tag="CRE_04057" /product="hypothetical protein" /db_xref="WormBase:CRE04057" /db_xref="WormBase:WBGene00057685" CDS join(377404..377441,377487..377988) /locus_tag="CRE_04057" /note="contains similarity to Pfam domains PF01466 (Skp1 family, dimerisation domain), PF03931 (Skp1 family, tetramerisation domain); contains similarity to Interpro domains IPR001232 (SKP1 component), IPR016072 (SKP1 component, dimerisation), IPR016897 (E3 ubiquitin ligase, SCF complex, Skp subunit), IPR011333 (BTB/POZ fold), IPR016073 (SKP1 component, POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05164.1" /db_xref="InterPro:IPR001232" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR016072" /db_xref="InterPro:IPR016073" /db_xref="InterPro:IPR016897" /db_xref="PFAM:PF01466" /db_xref="PFAM:PF03931" /db_xref="WormBase:CRE04057" /db_xref="WormBase:WBGene00057685" /translation="MPKKNNSKRPQASSMKPTTPPRMIQLTSSDGILLQADIRALILS STLASTIKELGYDKEDCTDFKPLPVNNVIAFTLKLVIEWCDKHKEDDPAIAQAEKDKK NIFIPSWDRHFLGRLPMSNLFDLITAAYHLDITGLINYGCKTVANSAKGKSTEEMREL FGIPEPWEQPSTSTATWDD" gene complement(<378224..>379512) /locus_tag="CRE_04133" /db_xref="WormBase:WBGene00057686" mRNA complement(join(<378224..378451,378497..378990, 379041..>379512)) /locus_tag="CRE_04133" /product="hypothetical protein" /db_xref="WormBase:CRE04133" /db_xref="WormBase:WBGene00057686" CDS complement(join(378224..378451,378497..378990, 379041..379512)) /locus_tag="CRE_04133" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05168.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04133" /db_xref="WormBase:WBGene00057686" /translation="MSGKSSKSVLATEKSEKGTKDDSKRGSPHSKKTITDSKPQSAEP NEKKLNSPTKRIGVMPRLKRPEPDSVPLLPIDEKFKTRWHIEGIIGKGGYGEIYLAID MKLAEEVAIKAEPIVRKGQVARRMILEQEVLLKLQGKPHVPLIFGSGHTDKFNYIVLQ LLSINLGDIRRISPTRKLSKSTVGRITVQAIAAIRDLHEIGYLHRDIKPANMCFGITP RVSETCFVRCWYLSIQTRHVLMLLDYGLVRRYKDSDGEWRPQRAKAGFRGTQRYVSTR VHRRLEQTPADDMVSLMYTAFELLAGELPWRNLEQSDDIWKIKEAVHFGHIEYFNGMA RELFDFSKLVSGLDPMVDPPYATLQTCVKKLYSPKRLSDPYDWEENFKEAILEKTLST DDSTK" gene complement(<380597..>381208) /locus_tag="CRE_04134" /db_xref="WormBase:WBGene00057687" mRNA complement(<380597..>381208) /locus_tag="CRE_04134" /product="hypothetical protein" /db_xref="WormBase:CRE04134" /db_xref="WormBase:WBGene00057687" CDS complement(380597..381208) /locus_tag="CRE_04134" /note="contains similarity to Pfam domains PF01466 (Skp1 family, dimerisation domain), PF03931 (Skp1 family, tetramerisation domain); contains similarity to Interpro domains IPR001232 (SKP1 component), IPR016072 (SKP1 component, dimerisation), IPR011333 (BTB/POZ fold), IPR016073 (SKP1 component, POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05230.1" /db_xref="InterPro:IPR001232" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR016072" /db_xref="InterPro:IPR016073" /db_xref="PFAM:PF01466" /db_xref="PFAM:PF03931" /db_xref="WormBase:CRE04134" /db_xref="WormBase:WBGene00057687" /translation="MTSPASSSEVKYLIESSEGNTFDVSGAALRQSNTFNAMFLNIGA DGPIPFTDYNEATLKKVFEYCEHSVNEENYSGPKHQDDLSKWDLNFFNEMDQKMFIDV INASNFLDIERLTSYCCERIARMLRGKNTQEMIKVITLPTAEELEAKQKVEEKKAAAA KKVAEKAAETAEKTETLEELPVQQLVQTTRNKLTRKYLSFSNE" gene complement(<382708..>390948) /gene="Cre-glr-4" /locus_tag="CRE_04135" /db_xref="WormBase:WBGene00057688" mRNA complement(join(<382708..382948,383643..383737, 383782..383897,383942..384007,384054..384177, 384228..384399,384450..384558,384605..384855, 384905..385094,385147..385252,385302..385562, 388760..388867,389568..389657,389706..389780, 389816..389917,389966..390067,390125..390439, 390488..390588,390649..390792,390846..>390948)) /gene="Cre-glr-4" /locus_tag="CRE_04135" /product="CRE-GLR-4 protein" /db_xref="WormBase:WBGene00057688" CDS complement(join(382708..382948,383643..383737, 383782..383897,383942..384007,384054..384177, 384228..384399,384450..384558,384605..384855, 384905..385094,385147..385252,385302..385562, 388760..388867,389568..389657,389706..389780, 389816..389917,389966..390067,390125..390439, 390488..390588,390649..390792,390846..390948)) /gene="Cre-glr-4" /locus_tag="CRE_04135" /note="contains similarity to Pfam domain PF00060 Ligand-gated ion channel; contains similarity to Interpro domains IPR015683 (Glutamate receptor-related), IPR001320 (Ionotropic glutamate receptor)" /codon_start=1 /product="CRE-GLR-4 protein" /protein_id="EFP05182.1" /db_xref="InterPro:IPR001320" /db_xref="InterPro:IPR015683" /db_xref="PFAM:PF00060" /db_xref="WormBase:CRE04135" /db_xref="WormBase:WBGene00057688" /translation="MQEKCRLIGFSIGIHLLITLILCSDATADDRFHIGTIANRGSFA YEHLRYAIDRWNTEHGAHTQIKFSIVSPIRYDNNYEERMCEIMQQGIVAVVLSNEESE QDSQLIKSMCHYFNIPCLSLQSTSLRDSISDFVTLLGPSRGAGARATSEFLDSMRWTG FLLAYQHGSDLEDLSPLMQYKQIADTGGRRIHIKVRRLPNNTDDYEPFLKYVKTRLKQ TNIIIHSNNITVLYNLLQQARGLNMAEPPFSYVFTNTDLSLLEDFLNNMYGASFHCNI TGLQLVKNDPMMKIFQTQLALTSEAVYVVGMAIYRMRELGHAPRQSAVMCDSHDIWSD GRIMNEGIRKLKLRNQLTGDVQFKSNGERDDIMYHGVGRINSQFVKLGNWSEKRGWNF DSRYANRWEFDIDPDSEDLEGLHLRVVVYLEEPFVIKTGDNQYEGFCIDLLNEMTKVL KFNYTIIEVQDGTYGIEDESGRWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPF MHLGISILLARTSEETDKGSLWTFLEPLSLTVWISLLISYCIVSYSMHILAKFSPYEW YNLERIDERDFENIKNQKNQFTVLNSFWFTMGSLMQQGSDVIPRAAATRLIAVVWWMF TQIIISSYTAQLAAFLTVERMSTPIESTQDLANQQKIRYGVLKSGSTMDFFRESKIPM YERMWSVMESSSPGVFVNSSREGIARVKSGGYAYMMESSMLEYYLERDCDLQSIGGLL DSKGYGIALPKGSPLRDILSRTVLQLQERTILEALKNKWWRDRREGPSCGPPPAEKAM NSKPQNIFGIFYVLLTGLIVAFLLACGEYCIESRHEAFRLKLTIVGKFIDWYRGNSND TKTRNKMRNMQLDTAGQEISISTHPCEPPPIPVSTSRPDPTRLSISSPAPTICVVSCD DGTPISRDRPPSISRAGLRRLSRMLPATTHEQLSRFRQGSMS" gene <404993..>405601 /gene="Cre-cki-1" /locus_tag="CRE_04058" /db_xref="WormBase:WBGene00057690" mRNA join(<404993..405204,405256..>405601) /gene="Cre-cki-1" /locus_tag="CRE_04058" /product="CRE-CKI-1 protein" /db_xref="WormBase:WBGene00057690" CDS join(404993..405204,405256..405601) /gene="Cre-cki-1" /locus_tag="CRE_04058" /note="contains similarity to Pfam domain PF02234 Cyclin-dependent kinase inhibitor; contains similarity to Interpro domain IPR003175 (Cyclin-dependent kinase inhibitor)" /codon_start=1 /product="CRE-CKI-1 protein" /protein_id="EFP05217.1" /db_xref="InterPro:IPR003175" /db_xref="PFAM:PF02234" /db_xref="WormBase:CRE04058" /db_xref="WormBase:WBGene00057690" /translation="MSSARRCLFGRPTPEQRSRTREWLDKACKRMREQESQKWGFDFE REQPLPSLQSDFIYDCLPANYVPDFYRAKFITVDTSMSTISTLDISSTTLTPLSSPST SDKEDHSLLDHNSSFEDEEEPKKWQFREPPTPRKSPMKRVQKITDYMTVSRKKISLSP NKISPKNVIYSPKSRRPTVSTRSPY" gene <409797..>411441 /gene="Cre-cki-2" /locus_tag="CRE_04059" /db_xref="WormBase:WBGene00057691" mRNA join(<409797..409955,410010..410335,410382..410440, 411089..411251,411297..>411441) /gene="Cre-cki-2" /locus_tag="CRE_04059" /product="CRE-CKI-2 protein" /db_xref="WormBase:WBGene00057691" CDS join(409797..409955,410010..410335,410382..410440, 411089..411251,411297..411441) /gene="Cre-cki-2" /locus_tag="CRE_04059" /note="contains similarity to Pfam domain PF02234 Cyclin-dependent kinase inhibitor; contains similarity to Interpro domain IPR003175 (Cyclin-dependent kinase inhibitor); coded for by the following C. remanei cDNAs: DR407589, DT934915, DY529714, DT935479, DR779507, DT934017" /codon_start=1 /product="CRE-CKI-2 protein" /protein_id="EFP05155.1" /db_xref="InterPro:IPR003175" /db_xref="PFAM:PF02234" /db_xref="WormBase:CRE04059" /db_xref="WormBase:WBGene00057691" /translation="MCVLPHFSLVSYRFSIFLSTIYSRDEAPNMATATGDSKRKAARS LFGRPEPGEVTRKLDNSLQRMYREESRKWNFDFAGGVPLVGAEGDIDFVSIPASDVPE FYREKIIRTRKTITRRDVSPVSDTLEAPEEPLFVVEPSEPQLLLASTSHEIEEYIKPV TRSSSAKNQQEVDTLKQTKLTNYMPVRKRRSETLPASGAVLMSRSISIDSNFATQKEK RGIKLGNNNKGAPKRPLRFVPPNIPKSAQSSVSDSALVSSPRSPPAKKTTVTSRRSRR PIEAGDF" gene <417208..>417472 /locus_tag="CRE_04060" /db_xref="WormBase:WBGene00057692" mRNA join(<417208..417381,417437..>417472) /locus_tag="CRE_04060" /product="hypothetical protein" /db_xref="WormBase:CRE04060" /db_xref="WormBase:WBGene00057692" CDS join(417208..417381,417437..417472) /locus_tag="CRE_04060" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05159.1" /db_xref="WormBase:CRE04060" /db_xref="WormBase:WBGene00057692" /translation="MRLFFYFLVLCNVISTLLAYDVRDFENLRQNTIRNIASLENILE HRIAGAHRHHKIPKSRRIGGNIVMG" gene complement(<417848..>419679) /gene="Cre-cex-2" /locus_tag="CRE_04136" /db_xref="WormBase:WBGene00057694" mRNA complement(join(<417848..417982,418535..418795, 418911..419024,419496..419548,419598..>419679)) /gene="Cre-cex-2" /locus_tag="CRE_04136" /product="CRE-CEX-2 protein" /db_xref="WormBase:WBGene00057694" CDS complement(join(417848..417982,418535..418795, 418911..419024,419496..419548,419598..419679)) /gene="Cre-cex-2" /locus_tag="CRE_04136" /note="contains similarity to Interpro domains IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand)" /codon_start=1 /product="CRE-CEX-2 protein" /protein_id="EFP05184.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="WormBase:CRE04136" /db_xref="WormBase:WBGene00057694" /translation="MTDMHPKAANPKEFLESKWKHAFTTFFDLDRNGLIEWKDFKDLI EVIGEVRGRRSDVFMTARLCLPDIWQKMTEAIGKEEEDIITLSDWIQLCESSRKSPRE PAWQKAYVEYMFKLLDESGIEELIKKVLIWDLSFSADHLVDQAEYVQVLGYFGVNRKD SSHCFDQFAFNHQGQLIHAIDKKKFHVLWKQFFHSEDPSSPGNWLLGKKFKTQE" gene <428628..>431443 /gene="Cre-klp-3" /locus_tag="CRE_04061" /db_xref="WormBase:WBGene00057695" mRNA join(<428628..428684,428732..428870,429405..429612, 429810..430135,430181..430598,430647..431289, 431339..>431443) /gene="Cre-klp-3" /locus_tag="CRE_04061" /product="CRE-KLP-3 protein" /db_xref="WormBase:WBGene00057695" CDS join(428628..428684,428732..428870,429405..429612, 429810..430135,430181..430598,430647..431289, 431339..431443) /gene="Cre-klp-3" /locus_tag="CRE_04061" /note="contains similarity to Pfam domain PF00225 Kinesin motor domain; contains similarity to Interpro domain IPR001752 (Kinesin, motor region)" /codon_start=1 /product="CRE-KLP-3 protein" /protein_id="EFP05192.1" /db_xref="InterPro:IPR001752" /db_xref="PFAM:PF00225" /db_xref="WormBase:CRE04061" /db_xref="WormBase:WBGene00057695" /translation="MDSHVGEVDIFQQCKYIHEVELVNMKLQMRILETHIETKDRLLR NLEDIIDEQESRIANMEDFIQGRATTYTNRSNMLRGISVLSLDFGTLSEENLRLKSAL SQLQKVARVNEILETDEDYESDMTSNEDRFALSRDSSCSVPRSVSPQPTGDVIKPYPQ MVQSMREEGQIKKLQRCAEKLKNEKDELRRLAIDTKDAFSVCMAEMNMMLTSKTTDFF RVLIERYKAEMEKRKQLHNQLVELNGNIRVFYRIRPQLASESDSQKPVVVIDDMDNGV VHVSNSSGSRKTSAGADKVIPTDFSQDQIFNEVSPIITSCIDGYNVCIFAYGHTGSGK TYTMDGPVEMPGINQRAIMQLFETAKERTGDIKYDIKVAMMEIYNEKIRDLLNTSNTN LAIRQTEEGKSSIPGLEEVTVNSAQEVTETLARGRKNKSVAATEANIESSRSHVIVRV LVSATNLITKVTTVGESFEELGSPCLHMSFSGRLNLVDLAGSERVSQTNATGQLLKEA QAINKSLSELGNVVLALRQNQKHIPFRNCQLTRILEDSLSEFSFHVVSENIHFVPDGD SKTLVIVHLSPDAKSLNESISSVNFAEKIGQVFTKSGTMKRESTRRSMTGITTGQRRE IPASPKK" gene complement(<431723..>435532) /gene="Cre-acr-7" /locus_tag="CRE_04137" /db_xref="WormBase:WBGene00057696" mRNA complement(join(<431723..431842,432180..432295, 432340..432439,433837..433959,434004..434117, 434162..434358,434405..434538,434584..434701, 434752..434875,434923..435013,435063..435187, 435235..435382,435429..>435532)) /gene="Cre-acr-7" /locus_tag="CRE_04137" /product="CRE-ACR-7 protein" /db_xref="WormBase:WBGene00057696" CDS complement(join(431723..431842,432180..432295, 432340..432439,433837..433959,434004..434117, 434162..434358,434405..434538,434584..434701, 434752..434875,434923..435013,435063..435187, 435235..435382,435429..435532)) /gene="Cre-acr-7" /locus_tag="CRE_04137" /note="contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region); contains similarity to Interpro domains IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region)" /codon_start=1 /product="CRE-ACR-7 protein" /protein_id="EFP05139.1" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="PFAM:PF02931" /db_xref="PFAM:PF02932" /db_xref="WormBase:CRE04137" /db_xref="WormBase:WBGene00057696" /translation="MVSLINIIISAFVLFVVFLNLDTVEGSKREAQLYRDLLANYSYL VRPVRNPKKALTVTMKVFIQQVLTVDAKHQMIEVNAWLKYVWTDFRLRWHPPDYENIT SVRFYGEDQIWQPDILLYNRYIEDEQESFDITYKTNALVYNDGVINWIPPGIFKLSCK MDITLFPFDEQICFMKFGSWTYHGFALDLRLDTIKGQEPSADLSTYITNGEWHLLAAP ARREEKFYKCCREPYPTVKFYLHLRRRTFYYVFNVILPTLLVSFMSLLAFCLPATDLS EKIGLQTTILLSVCFFLTILSEMTPTTSEAVPLLGVFFSALTFIVAISTTFTILVLNI RYRQITNHYLTPFFRSIFLEWLPWCMMMKRPDHKFRRGSSYRDSTADQCVQCAKNAEL KSILRGTDNQKQVDNDTLYPFPAETLSLKRKVGDGLFIQRRCQVHEEARSEKFTRGMR ACERTLREDGSELANVLVTIIKMYEVMVTQVERIRKRIALKRKRKDIQDEWKFAAQAV DRFCLILFTIVFITLCSIFVFIPPIKILD" gap 437503..437958 /estimated_length=456 gene complement(<438733..>439461) /locus_tag="CRE_04138" /db_xref="WormBase:WBGene00057698" mRNA complement(join(<438733..438908,438959..439062, 439109..>439461)) /locus_tag="CRE_04138" /product="hypothetical protein" /db_xref="WormBase:CRE04138" /db_xref="WormBase:WBGene00057698" CDS complement(join(438733..438908,438959..439062, 439109..439461)) /locus_tag="CRE_04138" /note="contains similarity to Brugia malayi Hypothetical 19.4 kDa protein T09A5.5 in chromosome III, putative.; TR:A8QHA2; coded for by the following C. remanei cDNAs: DY525272" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05244.1" /db_xref="WormBase:CRE04138" /db_xref="WormBase:WBGene00057698" /translation="MNVFILFISCNCKVYLSYLVKLAIYLPRFSFSICNRLFQMSIGA NAVMSVQNGFTAKLIRFVPHFVALRLSWTHNDLKAEGLEKFVEEYLPVIRENNPQVKY FLQRSYTTCDPFVVGEYSWLRHRKKRVNWKSKEQVLSMVEEMSIGGDYREGYRRGVNR RLPRGQELWDTETMGHDVFQVSSKWKADVLEEDELPITAKTHPHFTYRKY" gene complement(<439510..>440178) /gene="Cre-mdt-10" /locus_tag="CRE_04139" /db_xref="WormBase:WBGene00057699" mRNA complement(join(<439510..439794,439840..440037, 440086..>440178)) /gene="Cre-mdt-10" /locus_tag="CRE_04139" /product="CRE-MDT-10 protein" /db_xref="WormBase:WBGene00057699" CDS complement(join(439510..439794,439840..440037, 440086..440178)) /gene="Cre-mdt-10" /locus_tag="CRE_04139" /note="contains similarity to Brugia malayi SD24044p, putative (Fragment).; TR:A8QHA3" /codon_start=1 /product="CRE-MDT-10 protein" /protein_id="EFP05170.1" /db_xref="WormBase:CRE04139" /db_xref="WormBase:WBGene00057699" /translation="MDPSSPLFQNSMQQQQNQQRIMELNERNERDKTARQKEKEREEE RRKLEDEKILQLEKKLEEFQENARFIGDLASNFQAKNQDALNGRIYSLVRGLQDLDRM KGNFSDKQVPMDLLPYLDEGKNPLLYSKHCMEKTLEKNKAVGKKVLYQRYFFFQVNGK IEIYKKFRAHLMKEFSEEMPDLVMEYRNERG" gene complement(<440457..>440854) /locus_tag="CRE_04140" /db_xref="WormBase:WBGene00057700" mRNA complement(join(<440457..440582,440632..440751, 440801..>440854)) /locus_tag="CRE_04140" /product="hypothetical protein" /db_xref="WormBase:CRE04140" /db_xref="WormBase:WBGene00057700" CDS complement(join(440457..440582,440632..440751, 440801..440854)) /locus_tag="CRE_04140" /note="contains similarity to Pfam domain PF05254 Uncharacterised protein family (UPF0203); contains similarity to Interpro domain IPR007918 (Mitochondrial distribution and morphology family 35/apoptosis)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05172.1" /db_xref="InterPro:IPR007918" /db_xref="PFAM:(UPF0203)" /db_xref="PFAM:PF05254" /db_xref="WormBase:CRE04140" /db_xref="WormBase:WBGene00057700" /translation="MSDRHMSSIFPECDQLKQIYDKCFTEFFQKFITPNYRHQYAVNP CERFHEVYKRCVDERLATQRPFEIDLDEIRKEYLNTDDDKLKDRQNRQSTDSEHK" gene complement(<441214..>442563) /locus_tag="CRE_04141" /db_xref="WormBase:WBGene00057701" mRNA complement(join(<441214..441275,441322..441438, 441482..441960,442099..442361,442406..442506, 442554..>442563)) /locus_tag="CRE_04141" /product="hypothetical protein" /db_xref="WormBase:CRE04141" /db_xref="WormBase:WBGene00057701" CDS complement(join(441214..441275,441322..441438, 441482..441960,442099..442361,442406..442506, 442554..442563)) /locus_tag="CRE_04141" /note="contains similarity to Pfam domain PF00385 'chromo' (CHRromatin Organisation MOdifier) domain; contains similarity to Interpro domains IPR000953 (Chromo domain), IPR001525 (C-5 cytosine-specific DNA methylase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05243.1" /db_xref="InterPro:IPR000953" /db_xref="InterPro:IPR001525" /db_xref="PFAM:PF00385" /db_xref="WormBase:CRE04141" /db_xref="WormBase:WBGene00057701" /translation="MGDEPREPEAKEGKSEEVFEVEKILDHRVTNNQLQLKVRWLGYG PDDDTFEPEDDIKECASEVVEEYYRKMKVNDKTELIERLQKEIKRTKKQTAKKRERSP SPDVDDDGSESDASYSSAKKNKKASRNATPSSSSKVAKVPTKAALKSYDSHGHVPPNK AKQAATRIRTSMFGDSSDEEDASPVRSAVDELQSKVKPKETKDVFQSPIQRPAETPKP KTENGSNVTSKQSSSPQPCSSSAVSSSYKVLYITVCLIFFSIQPSSGNLETNGRHRSL ELPHKKKDEPLWSVTGIVRHKNESNVVDKLILMTNRDTGDRKVLNPDEAFNLDSWALT KYLLDRCEF" gene <442893..>443171 /locus_tag="CRE_04062" /db_xref="WormBase:WBGene00084313" mRNA <442893..>443171 /locus_tag="CRE_04062" /product="hypothetical protein" /db_xref="WormBase:CRE04062" /db_xref="WormBase:WBGene00084313" CDS 442893..443171 /locus_tag="CRE_04062" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05145.1" /db_xref="WormBase:CRE04062" /db_xref="WormBase:WBGene00084313" /translation="MRVPAGAPIPFWLSVKNRFPKWAKMSRPTLGSMAVVATAVVTCC AVAAVTLYPKYHHDYYQKAQKEERAMLRSSREQQAGPQNVWIDPFERK" gene <443399..>444654 /locus_tag="CRE_04063" /db_xref="WormBase:WBGene00057702" mRNA join(<443399..443512,443555..443829,443873..444004, 444049..444277,444328..444414,444457..>444654) /locus_tag="CRE_04063" /product="hypothetical protein" /db_xref="WormBase:CRE04063" /db_xref="WormBase:WBGene00057702" CDS join(443399..443512,443555..443829,443873..444004, 444049..444277,444328..444414,444457..444654) /locus_tag="CRE_04063" /note="contains similarity to Pfam domain PF00560 Leucine Rich Repeat; contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003603 (U2A'/phosphoprotein 32 family A, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05215.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003603" /db_xref="PFAM:PF00560" /db_xref="WormBase:CRE04063" /db_xref="WormBase:WBGene00057702" /translation="MSEKPSAGVVDLPQEEEESKEPVLKNQFDLSTYDADSTEIDLTH TRADHIPDLSRFTNVEVKLKITYFPHRFFFLSQELRMRNNLLTSCSPTLSSLVTLTSL DLYENQLTEISNLESLVNLVSLDLSYNRIREISGLDKLTKLEILYLVNNKIEKIENLG SLTQLKLLELGDNRIKKIENIEHLVNLEELFLGKNKIRQIEGVGSLQKLRVLSIPGNR LVKIENVEELKDLKELYLSDQGLQNIYGVESLVNLTLLDVANNEINSFSGVEKLTSLN DFWANDNKVESFSEIELLSKLKDLQTVYLERNPFYFHDTNQYRRKVMMTLTQVTQIDA TMCRQPTSPF" gene complement(<444832..>446779) /locus_tag="CRE_04142" /db_xref="WormBase:WBGene00057703" mRNA complement(join(<444832..445114,445157..445875, 445916..446248,446294..>446779)) /locus_tag="CRE_04142" /product="hypothetical protein" /db_xref="WormBase:CRE04142" /db_xref="WormBase:WBGene00057703" CDS complement(join(444832..445114,445157..445875, 445916..446248,446294..446779)) /locus_tag="CRE_04142" /note="contains similarity to Brugia malayi BTB/POZ domain containing protein.; TR:A8PBU1" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05115.1" /db_xref="WormBase:CRE04142" /db_xref="WormBase:WBGene00057703" /translation="MSQSDLSVLSAHTATSFHEMDLEILKETQKNLELEMNNRMNVGK EIEVEEMMETPVVFVAVDDQNLKNGQDVDSFVFEKLEFRVKQVVEYGTRRVYLSVQSM TPAEWILLVQLRIKTGSQSNILNVVDKDVFKFDAFSYPLNVEIQNNDVKFLKFEMRVL NLMYLDYPKFEDGDEVIEFDDGSTIRVHSNILALLSDFMAGAEKQYASRSGCSAIRVT SSEKEAFLELLYQAYPTRRPIYSSFRRLTAASVAYKCDILIYHLSKHLIEYNFRPMTF IQRFQASIENRLEPAIRELAFRAALDGTWNRLIQSGFEPENFCGRQVYTKIVCPAILE ARSARPDATTLQPPVQKLNFIELEVSEICLNSSHETGVFQEGDNTKSSILFRGTHFYI NSGLLAAHGKEMLCIGQNGEYIARYTPEFHRECARENLIPGEVLVQLFTYMHPMGDVP HPTMVRACIVFAHDHGWNVVKENLEQEFEPPITPDEYMSQLVFGDKFDLKNLLRVNIQ RAESSCRELAEALEKHGKLKMLKDRTREGLLDRMCSGWGLNPMVNRLSTRFPTTFHHR TVNLERGKAVVVGEGRAIDTLNSMASEHAFGEPNELIVLD" gene <447329..>448974 /gene="Cre-ostb-1" /locus_tag="CRE_04064" /db_xref="WormBase:WBGene00057704" mRNA join(<447329..447461,447569..448065,448113..448637, 448792..>448974) /gene="Cre-ostb-1" /locus_tag="CRE_04064" /product="CRE-OSTB-1 protein" /db_xref="WormBase:WBGene00057704" CDS join(447329..447461,447569..448065,448113..448637, 448792..448974) /gene="Cre-ostb-1" /locus_tag="CRE_04064" /note="contains similarity to Pfam domain PF03345 Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kD subunit; contains similarity to Interpro domains IPR000010 (Proteinase inhibitor I25, cystatin), IPR005013 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit); coded for by the following C. remanei cDNAs: DR779724, DR780171, DR776696, DR776106" /codon_start=1 /product="CRE-OSTB-1 protein" /protein_id="EFP05125.1" /db_xref="InterPro:IPR000010" /db_xref="InterPro:IPR005013" /db_xref="PFAM:PF03345" /db_xref="WormBase:CRE04064" /db_xref="WormBase:WBGene00057704" /translation="MRWLPTLLLVASIGIQQSFADRVLVLGETAAVKDSHSVFLNSIK ERGHELTVRAADDAQLALFKHGQLIFDHLFVLAPGVQVFGGSLSPVEISKFVDAGGNV LIAAGSNIGDALREVAVEHGFEFDEAGTAVIDHHNYDQTLDAGDHTTIVVGKDQIISA ELIVGNAAKLGPVLFRGVGLVSGKSNNLALNIVKASGTAFSSDPKAARAVNPSIAGSR TLLIGGLQSRNNARIVFSGSAEFFSNTFLASKTNSVNPLVQGASSGNAELASAISKWV MKESGVIRVKSVNHHKKGETVPPAEDYFITEDVVYTIEIEELKNGKWVPFQGKDVQLE FVRIDPFVRATLKNNNGRLSAAFKLPDVLGVFKFLVDYRRVGYTHLYDVQQVSVRPLW HTQYERFIRSAYPYYASSFSMMAGLVLFSIVYLYHKDTPIKGAKVLDSEKKKN" gene complement(<449799..>452488) /gene="Cre-ztf-17" /locus_tag="CRE_04143" /db_xref="WormBase:WBGene00057705" mRNA complement(join(<449799..450158,450207..450314, 450362..450432,450481..450633,450679..451228, 451280..451733,451780..452018,452065..452217, 452270..452350,452423..>452488)) /gene="Cre-ztf-17" /locus_tag="CRE_04143" /product="CRE-ZTF-17 protein" /db_xref="WormBase:WBGene00057705" CDS complement(join(449799..450158,450207..450314, 450362..450432,450481..450633,450679..451228, 451280..451733,451780..452018,452065..452217, 452270..452350,452423..452488)) /gene="Cre-ztf-17" /locus_tag="CRE_04143" /note="contains similarity to Interpro domain IPR015880 (Zinc finger, C2H2-like)" /codon_start=1 /product="CRE-ZTF-17 protein" /protein_id="EFP05199.1" /db_xref="InterPro:IPR015880" /db_xref="WormBase:CRE04143" /db_xref="WormBase:WBGene00057705" /translation="MLRYQASVYGDSYGNDYHSPVQGPSKIASSIGLRSQQSKVIKRP LTTYKSIPACRLAPRRRLFVAEGTGVQKSMTSSSGVTFPPPDYMKKMKENYESGKIIY IRRNGGVKGQSIPGRLTTINTSIRAPSYVITENSFQSFLIRYHATSMSSGSVTLDTSG SAPKYVYRLPKPEFGSKFDENRPTSNMYVPAQEPPKQHFTTVPACMSMGGEVVFEEEV DDEIADLGADELTGDGFNADKSPKSESPDPYLKSSGPLVQPSSTLKSPNYNILQRNRL PGSRFACPQPDCYWRGANEMSMKKHMLVHGQKQPVMYDKAGETMKVQLVQPKPKGVKC SECDTFAYSRPLLLRHMYDSHGIEAPLVKRTFANREMLQSWLDSLRETHAVEFVVSSG SKKWGRGLQVHYLTCSRSGDQKERPNKKYVRPPRPSIKCGRNCMAYLKIKQNPTVSEL QIEGCLHHSGHEIDHTRMVLEPNEVYSSSINFFQNILLQLASIGLLVDAVNEGLDVLG NVETIRSYLGSSGRFRLVTDNGLIEQMPIWFEQYHRDVSSYNGSGYRDSGPLHGSSYL SSMPLKHPINGHRRVQYSGINIKKELDAIATKAAVPIRFSGGQLQNVQLNPENQEYDE SKVKIEMDDEDALATQSILKDEFEEFKPEDLFGLHGTDDEILCGGEEASGVTSNIDGI LAANLPENFNDPLCGMDLNTDFSGSFDDNVFDEVIHNKSVFNIHCRFQFLGLSNFNDR TNAF" gene complement(<453511..>455883) /locus_tag="CRE_04144" /db_xref="WormBase:WBGene00057706" mRNA complement(join(<453511..453662,453706..453791, 453839..454021,454066..454214,454264..454467, 454515..454602,454645..454754,454807..454949, 454996..455180,455228..455642,455685..>455883)) /locus_tag="CRE_04144" /product="hypothetical protein" /db_xref="WormBase:CRE04144" /db_xref="WormBase:WBGene00057706" CDS complement(join(453511..453662,453706..453791, 453839..454021,454066..454214,454264..454467, 454515..454602,454645..454754,454807..454949, 454996..455180,455228..455642,455685..455883)) /locus_tag="CRE_04144" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily; contains similarity to Interpro domain IPR011701 (Major facilitator superfamily MFS-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05110.1" /db_xref="InterPro:IPR011701" /db_xref="PFAM:PF07690" /db_xref="WormBase:CRE04144" /db_xref="WormBase:WBGene00057706" /translation="MAGGRPAAGCCCLINNVRFPVLILTTFSIAALFSTLILPNLLAI LDPEVDIRPVPGLDSLHGSSYKGYDRFKRESEEPKIPSKVVRFDQSTEEEDGHPILPP TEKPAPIPTTTTPATKKTEKPIPVFITNRPETTTERFERATTTKIESTTTQDDVVARG ISYISKLKNSNFSEVQRSLKKLRDAEEGKVEDKAEKGVEETFEYKTEPLSLRLRRGLL VSSPGIGIIFGSFLTINLTKKYGARKVFTTCLSQSALSIIIFLYVQKRYFYLLVIIRF IQGVLFSSVFPTMGSLLIHWGPLKEQLTFLTTMLMFISIGPVVAWPVANYFNALELAH DHVYYVQMAIIAILGVLWSIFYRDLPQDHPWVSGVELNRIVAGKVKELHSNRALSDAF SSLFRSLSAWSIWTSAFGFFSATAFVTIYLPSFLSSPDVFIVEGLGIHSSLPMQLLPL ACAIFASLNLLFKPSTKIIRILNTTAFALAAFLMVAIILVAHLQTKAGLLSLLLISML PFGLAIVTGFMRSLTVVGRVFAEQIVAMCAIPFGLAFTVLPLVGTYVINENKLAEWMK VAMFLFFVLSAVAIEFAVFGRGKSASWAASSWDPLAASTKMQSLALIDFNQDECGLYE LRRIEPKNKSDHS" gene complement(<456354..>460743) /locus_tag="CRE_04145" /db_xref="WormBase:WBGene00057707" mRNA complement(join(<456354..456505,456584..456643, 456693..456972,457017..457112,457156..457599, 457642..457743,457791..457916,457972..458194, 458250..458401,458444..458557,458604..458729, 458777..458905,459709..459926,459973..460623, 460671..>460743)) /locus_tag="CRE_04145" /product="hypothetical protein" /db_xref="WormBase:CRE04145" /db_xref="WormBase:WBGene00057707" CDS complement(join(456354..456505,456584..456643, 456693..456972,457017..457112,457156..457599, 457642..457743,457791..457916,457972..458194, 458250..458401,458444..458557,458604..458729, 458777..458905,459709..459926,459973..460623, 460671..460743)) /locus_tag="CRE_04145" /note="contains similarity to Pfam domain PF06462 Propeller; contains similarity to Interpro domains IPR006624 (Beta-propeller repeat TECPR), IPR006614 (Dysferlin, C-terminal), IPR006613 (Dysferlin, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05189.1" /db_xref="InterPro:IPR006613" /db_xref="InterPro:IPR006614" /db_xref="InterPro:IPR006624" /db_xref="PFAM:PF06462" /db_xref="WormBase:CRE04145" /db_xref="WormBase:WBGene00057707" /translation="MPSEYIWTVSANGVPCRIPAPSDPRCTSETDWQELPCSDGSSIC TIVASPTTAFAIDRTGRLLILVMPTHIAIRERVEIYNNQRWIGIWRGTFFIDRPRYSD ESGQIAKDISLNEISSGWSWEDKWVPHLDPRKYDKEGWQYSLSFLAPKWDKQCRLYHL VRRRVLKRHMRYTSHDKWIEMTNEETRLYTELAIGGLDVMSEGECLLFALGSDGNIYR RDGIKTNCPGGTEWQIIPKITFKDSDSDDVTLISASPSLATLIAITWDGKMFHRKEIT RKSPIGLTWQSIPTPKNKAVICAAIGTKTMWCITADGCVWFTRLEVDEKLKEHTMKNI SSDGYQMVTQGGVSRLSVSKNDKVFCISTSEKIEIRSGIESNEPSGKRFEGIVDRGEP KDQRWISIHCGSVNFSQVPEYFTSSSSLQSKMEVLLFKKADWRLKILQQLQESTNRSW SAMNGIKGGDLESPDDNNDGSNSVKHIRCQMMQGDAFRSVNVTITNKTIEITGEQMTP KSIENSKIKSVLPSFQRLPQKYLLYFFTGSHSEFECFAFTDEKSRSIFQIDIENIIRN FICCSTRNSFGESMWSVSIGGVVRWHCLAEMSQESKFEKRVNPAETRALTVEGIFENI DCGAKGCVWAVNEVSGSLYALSSRYNPLSSHDETYDFKMTNERTFKMYEYQKHAVFRG FISFQGSQKGVSAWMCDGRPCPPNFSSLPSTNWSWMDSSWHLEDEEWKYSNEIDGTYD YNERGQGRARRRLWIRRARYDCNKSPWCHVEAPPMKYIRLAKQASTETIIVVALTKDG HILRRNGVTRENFTGTTWTEILTDSPISCIHYQSEGMKLWCVTSDGMISSRNLQISND SSFLSNSDWRHLDMDLSPLTQHLSKKSTTDLELTGVSDILYARVGFILFRIDTKNETI SDAYPMDNLQQAVVNAQGSICVRGTNITIVRDWRVVPYTDRKATIIAMRNVDRATNMG RGLKNMALF" gap 459020..459318 /estimated_length=299 gene complement(<461186..>462135) /gene="Cre-vha-4" /locus_tag="CRE_04146" /db_xref="WormBase:WBGene00057709" mRNA complement(join(<461186..461521,461652..461799, 461846..461978,462063..>462135)) /gene="Cre-vha-4" /locus_tag="CRE_04146" /product="CRE-VHA-4 protein" /db_xref="WormBase:WBGene00057709" CDS complement(join(461186..461521,461652..461799, 461846..461978,462063..462135)) /gene="Cre-vha-4" /locus_tag="CRE_04146" /note="contains similarity to Pfam domain PF00137 ATP synthase subunit C; contains similarity to Interpro domain IPR002379 (ATPase, F0/V0 complex, subunit C); coded for by the following C. remanei cDNAs: DY525995" /codon_start=1 /product="CRE-VHA-4 protein" /protein_id="EFP05224.1" /db_xref="InterPro:IPR002379" /db_xref="PFAM:PF00137" /db_xref="WormBase:CRE04146" /db_xref="WormBase:WBGene00057709" /translation="MAAGAILKTTATLTVITTLILVGTGLFYMLSGQGHRFDIAWFLT STSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAV AIFGIIMAFVFVGKLALCMFFLIILSIFFFQEFRREDLPEGQDGMTILARNLAAGYMI FGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGI VQTNKASFGNK" gene <462584..>463210 /locus_tag="CRE_04065" /db_xref="WormBase:WBGene00057710" mRNA join(<462584..462659,462704..462760,462809..462973, 463023..>463210) /locus_tag="CRE_04065" /product="hypothetical protein" /db_xref="WormBase:CRE04065" /db_xref="WormBase:WBGene00057710" CDS join(462584..462659,462704..462760,462809..462973, 463023..463210) /locus_tag="CRE_04065" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05181.1" /db_xref="WormBase:CRE04065" /db_xref="WormBase:WBGene00057710" /translation="MEWKNDILSFSGFDYGVSKRTKLIEESYCDYNQQSELKKSSSIE ELKEYELDTQVRHALEKTAEDGGNKYQPEECEFDSMTERKIENLYFQNVEQAERKMKK LTILKSKWSEPWQVGDEIVARTYLKPKNHANPWKNGTIPEKEAAETLKNRQKRGMCTI S" gene <463614..>466280 /locus_tag="CRE_04066" /db_xref="WormBase:WBGene00057711" mRNA join(<463614..463648,463703..463913,463957..464079, 464153..464249,464301..464575,464620..464737, 464779..464993,465038..465110,465162..465270, 465318..465446,465506..465651,465697..465755, 465797..465912,465962..466058,466107..>466280) /locus_tag="CRE_04066" /product="hypothetical protein" /db_xref="WormBase:CRE04066" /db_xref="WormBase:WBGene00057711" CDS join(463614..463648,463703..463913,463957..464079, 464153..464249,464301..464575,464620..464737, 464779..464993,465038..465110,465162..465270, 465318..465446,465506..465651,465697..465755, 465797..465912,465962..466058,466107..466280) /locus_tag="CRE_04066" /note="contains similarity to Interpro domain IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05220.1" /db_xref="InterPro:IPR015943" /db_xref="WormBase:CRE04066" /db_xref="WormBase:WBGene00057711" /translation="MSTKSRSSSKEKKSSKKEKSTKKESKKEKKIKEKKPKTPEPEPE YEDDFEEYEDDFEEDEDDQIDDKISKADEKRGNNKEKEVPFESNLMQRLATSHMRRTE NATKPPVVPKISTAPISFHSTIDNKPYSYHNEEERKTQEQRAFGRLNKLRGLISIEVT KSQVFTDISSNIFEPLSSLPSNKAHAFTQTGKDVNTEEVQTEKGETEDKETQCPHSES MRLEDGAIERERTAIDRARLKKFFFAATQTIREILISDEKTEEDETSEKSVSKFSRGF NPFRLCQVVSKCKSTCIKKGESDSVLVAYEIFESPAPDLINKSLIAEFYVHKRRPPKR LFVVESVVSAMELSQSTQTLYVCLMDGTFCAFDLSITDAYFDDNLPWVDSETNIALRR PTFDSSFLATTISDATPLIGITVVKSNMGEDITTIDSSGTISYWVVNRIEKNELRVLL TAVIRPHPVLKRHSSTFAVSAFCYTTNPLRFFIGTDTGMMYSVYKSDTSQAIPKIFKT EKEKYGEVTMITANPSDNSVLLIGFSNGSISVYRASQTSAIVNIPTADLSTRVTWLTW SLTNPSGFYAIHNGNITTFWDLGFKLSPKSVDHRTDSVQLLAFDTWLSESARIGYMAF GLSNGDSEVHVLEDPARKNQNETILDVLRRIKNL" gene <467700..>468014 /locus_tag="CRE_04067" /db_xref="WormBase:WBGene00057712" mRNA <467700..>468014 /locus_tag="CRE_04067" /product="hypothetical protein" /db_xref="WormBase:CRE04067" /db_xref="WormBase:WBGene00057712" CDS 467700..468014 /locus_tag="CRE_04067" /codon_start=1 /product="hypothetical protein" /protein_id="EFP05154.1" /db_xref="WormBase:CRE04067" /db_xref="WormBase:WBGene00057712" /translation="MKYDASDERWANPPQPVAAAEQAPAFDHSMVSEEYEHDKKKNPA PKQGISFSQALLASGHEKSDGKIKLTASSFMEVGSYAVFLIVLVYGEHALGVVNIEKI LS" CONTIG join(AAGD02001068.1:1..46218,gap(10),AAGD02001069.1:1..27212, gap(648),AAGD02001070.1:1..210078,gap(10),AAGD02001071.1:1..53942, gap(514),AAGD02001072.1:1..98870,gap(456),AAGD02001073.1:1..21061, gap(299),AAGD02001074.1:1..9038) //