LOCUS DS268441 634842 bp DNA linear CON 11-OCT-2010 DEFINITION Caenorhabditis remanei Scfld02_34 genomic scaffold, whole genome shotgun sequence. ACCESSION DS268441 AAGD02000000 VERSION DS268441.1 DBLINK BioProject: PRJNA12588 BioSample: SAMN00627085 KEYWORDS WGS. SOURCE Caenorhabditis remanei ORGANISM Caenorhabditis remanei Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 634842) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE PCAP assembly of the Caenorhabditis remanei genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 634842) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (17-JUL-2007) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA COMMENT The organism is Caenorhabditis remanei Sudhaus, 1974; strain PB4641. This strain is derived from the wild isolate EM464. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain EM464 was established with individuals collected from a pillbug (Armadillidium vulgare) in Brooklyn, New York, NY, USA in June 1990 by Scott Baird. EM464 was described as /Caenorhabditis vulgaris/Baird, Fitch & Emmons, 1994, which was later shown to be a junior synonym of C. remanei (Sudhaus & Kiontke 1996). Annotation was added to the scaffolds in October 2010. FEATURES Location/Qualifiers source 1..634842 /organism="Caenorhabditis remanei" /mol_type="genomic DNA" /strain="PB4641" /db_xref="taxon:31234" gene <4006..>9935 /gene="Cre-catp-1" /locus_tag="CRE_20675" /db_xref="WormBase:WBGene00060864" mRNA join(<4006..4254,4307..4639,4747..5127,5234..5540, 7359..7698,7746..8061,8114..8236,8285..8566,8647..8899, 8944..9149,9193..9699,9747..>9935) /gene="Cre-catp-1" /locus_tag="CRE_20675" /product="CRE-CATP-1 protein" /db_xref="WormBase:WBGene00060864" CDS join(4006..4254,4307..4639,4747..5127,5234..5540, 7359..7698,7746..8061,8114..8236,8285..8566,8647..8899, 8944..9149,9193..9699,9747..9935) /gene="Cre-catp-1" /locus_tag="CRE_20675" /note="contains similarity to Pfam domains PF00690 (Cation transporter/ATPase, N-terminus), PF00689 (Cation transporting ATPase, C-terminus), PF00122 (E1-E2 ATPase), PF00702 (haloacid dehalogenase-like hydrolase); contains similarity to Interpro domains IPR008250 (E1-E2 ATPase-associated region), IPR006069 (ATPase, P-type cation exchange, alpha subunit), IPR004014 (ATPase, P-type cation-transporter, N-terminal), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR006068 (ATPase, P-type cation-transporter, C-terminal), IPR005834 (Haloacid dehalogenase-like hydrolase), IPR000695 (H+ transporting ATPase, proton pump)" /codon_start=1 /product="CRE-CATP-1 protein" /protein_id="EFP00971.1" /db_xref="InterPro:IPR000695" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR004014" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006068" /db_xref="InterPro:IPR006069" /db_xref="InterPro:IPR008250" /db_xref="PFAM:PF00122" /db_xref="PFAM:PF00689" /db_xref="PFAM:PF00690" /db_xref="PFAM:PF00702" /db_xref="WormBase:CRE20675" /db_xref="WormBase:WBGene00060864" /translation="MNKNISESQNCIAPSSQNGSAMLEHHGSAGTSMCSSSDTTFTKL SEKAKRKREEKEEKEHGMSLIDIIKTSFVEHTLTVDQIKDLYPDSYVFPQVAERSDGL HSDEARKRLKDGGLNHIDTNSEPSLSRFFLAQFHFKFWILLIGAAILSVMTYFIHMAR GYNEPLNMYCAIILIAVVIFMGILSYWQQAKAKKVLQENRDMMPAMSYVIRDCEEQEI KADEVVVGDLVYLRLVIIPSFKISTSQSFRAGYKIPADMRILQANCLMIESNDATGHR TVREYKADPVPPTISVFDSCNVAFMGSYCTEGEGIGIVIRTGKFTVMGALAEQHTHIP PPSGRLQTELQNFSTFITIVALSMASGVFFIGCFVARFENILDHFIVGFVVIIVANVP QGLPATVMSQLRIIARRMAQKNILIKKLELIDELGAATVICADKSGTLTMNKMVVTDL WYNSRLLTGSAVDMKHPHLRAMKSSMKCQERLEEPLPDILTVMSVCNNGQFEHVRRSM RRVSTMRAMQKSASEAMLSAHMKKKFTIVDTRTGQVSEAGGLNKERTNQVSQSVAGES GKKSVKAKKNDIFGVPSDVALIQYVELSASVEGIRQRYQTVFEIPFNSSRRCQLVVAR CLASDFPVTAESVENPSEGQSRFMIFTKGAPEVILGKCSQARHGKELKVIDEKYKREC QSAWEMLGNEGRRVIAFAQKSFNADENTKFNGQEHDGDLVFLGMAAIMDPPRPETAAA IEQCKVAGVKVFMITGDHPTTATAIARQIGLIGTTNLVDAEKPRNSWAVVTGDQLKNY KAQDWNFLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDAPALAHANVGI AMGQTGSDIAKQTADIVLLDDNFASIVMGIEEGRLLFDNLRLSLAYTFAHLWPEVFPI MMSFMLGLPHGLSPLQILSVDLASEMPPAISLAYEQPENDIMHTPPRSRTARLLSKSL LVYAYILAGFGITIGCIAAYLSVYWYEPLSRCLLIDFFSSYHNIPIGDILFTAEHHWK IGAKNFTTSNGLTFDEQQQLFIKGQAAAAWQITLVMSQVFHLYNCTTRRVSVFRHGLT NIVSVFAVIIEVLLLFMFVYTPVFQYIMDIHTPPAHVWAIAPIVGLYLLAFNEMRKYF IRNFPKNKLVRLIKW" gap 6842..6996 /estimated_length=155 gene complement(<10182..>10578) /locus_tag="CRE_20733" /db_xref="WormBase:WBGene00060865" mRNA complement(join(<10182..10330,10407..>10578)) /locus_tag="CRE_20733" /product="hypothetical protein" /db_xref="WormBase:CRE20733" /db_xref="WormBase:WBGene00060865" CDS complement(join(10182..10330,10407..10578)) /locus_tag="CRE_20733" /note="contains similarity to Pfam domain PF01722 BolA-like protein; contains similarity to Interpro domain IPR002634 (BolA-like protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01021.1" /db_xref="InterPro:IPR002634" /db_xref="PFAM:PF01722" /db_xref="WormBase:CRE20733" /db_xref="WormBase:WBGene00060865" /translation="MLRLATSLRSTLITSALRRHSACCGGDHQMSEAEQKMSKLLTEK IEGCSRVEVHDVSNGCGSMFDVVVEASSFQGKSKVAQHKIVTSILKEQIKSMHGLTIK TKAA" gene complement(<10938..>14114) /locus_tag="CRE_20734" /db_xref="WormBase:WBGene00060866" mRNA complement(join(<10938..11196,11276..11756,11807..12250, 12309..12413,12464..13684,13770..13887,13941..>14114)) /locus_tag="CRE_20734" /product="hypothetical protein" /db_xref="WormBase:CRE20734" /db_xref="WormBase:WBGene00060866" CDS complement(join(10938..11196,11276..11756,11807..12250, 12309..12413,12464..13684,13770..13887,13941..14114)) /locus_tag="CRE_20734" /note="contains similarity to Pfam domain PF04685 Protein of unknown function, DUF608; contains similarity to Interpro domains IPR006775 (Protein of unknown function DUF608), IPR014551 (Beta-glucosidase, GBA2 type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00966.1" /db_xref="InterPro:IPR006775" /db_xref="InterPro:IPR014551" /db_xref="PFAM:PF04685" /db_xref="WormBase:CRE20734" /db_xref="WormBase:WBGene00060866" /translation="MRRRRSTKNTKKMAKDTGEEVGDDWIPSTVMSGPGWKARGDRKP KEKRVPFNRPTPYQIYEALPFVRRYFMYWMKHTFDKEKLFINTFQPLKHKPYYGVPCG GIGCGAIGRDFRGGFCKFSLRPGLVEHKVDVVAADQFIISVRENDTCIYQKVLSAADV HRSGNQLSTWDFTFPKKNVNYRGLFPRSWTTFRIPELGITVTIRQVSPVLPHNYEDTT YPVCLFVIDVENTTTSKEYEVSIAFTFRNGTGNRRWERESECSAVKFETPGPSDSESN PGQEKVTGISLYHTISSMPCTYGLATTHKNGSILSVCERFDPARNGSAFWNHLQQTGD VPSCVRILHVFFHKINSFQEEECAVNAREMAVAVCNRFRLSPGTKKTHDYALSWDMPK VHFGSVARSYHRRYTRFFDAAEAGTAADSLCVRALHLKNKWEEEIEKWQLPILNHEKL PDWYKSAIFNELYFITDGGTVWFEFDEQWAEHEMHLSEYTKEKMKSIGRFGYLESWEY RMVNTYDVHFYASYALAELWPQLELTVQSEFTDQVYHSIEKPTRFHMEGDWANVKTAS RVPHDLGNPADEPWIATNAYVMHDTGKWKDLNMKYVLTSWRDYVVLSEEHQEFLFHTW PAVKMIMLEALENWDQNGDGMIENFGKADQTYDAWQMEGVSAYCGSLWLASLRVSIEM ARLMGEEATENLFRVTLNKAKKVFIDTLWTGTYFRFCERSRSRETVMADQLCGYWFLQ SVSPEMVDDLLPNHMVRSALDTIYRLNVCRFGNGQMGAVNGMKPNGVVDREYIQADEM WTGVTYAVASLLIQQGEVEKAFHTASGSYLTCFEQTGLQYQTPEALYESKFYRAIGYM RPLSIWAMQWSLKKHCGLNTSQERLPKLPTASTSSIQEKEEDAMKRMTVETSASEDSS SLGYVSDYREESKISTRIR" gene complement(<16616..>19657) /gene="Cre-apg-1" /locus_tag="CRE_20735" /db_xref="WormBase:WBGene00060867" mRNA complement(join(<16616..16702,16750..17023,17069..17434, 17481..17920,18034..18294,18342..19038,19117..19241, 19312..19516,19596..>19657)) /gene="Cre-apg-1" /locus_tag="CRE_20735" /product="CRE-APG-1 protein" /db_xref="WormBase:WBGene00060867" CDS complement(join(16616..16702,16750..17023,17069..17434, 17481..17920,18034..18294,18342..19038,19117..19241, 19312..19516,19596..19657)) /gene="Cre-apg-1" /locus_tag="CRE_20735" /note="contains similarity to Pfam domains PF02883 (Adaptin C-terminal domain), PF01602 (Adaptin N terminal region); contains similarity to Interpro domains IPR017107 (Adaptor protein complex AP-1, gamma subunit), IPR011989 (Armadillo-like helical), IPR002553 (Clathrin/coatomer adaptor, adaptin-like, N-terminal), IPR008152 (Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain), IPR008153 (Clathrin adaptor, gamma-adaptin, appendage)" /codon_start=1 /product="CRE-APG-1 protein" /protein_id="EFP00996.1" /db_xref="InterPro:IPR002553" /db_xref="InterPro:IPR008152" /db_xref="InterPro:IPR008153" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR017107" /db_xref="PFAM:PF01602" /db_xref="PFAM:PF02883" /db_xref="WormBase:CRE20735" /db_xref="WormBase:WBGene00060867" /translation="MATAVELAIEKIDEYKSKIGRTLGTPMRLRDLIRQVRAARTMAE ERAVVDRESANIRESFRDDDSPWKCRNIAKLLYIHMLGYPAHFGQMECMKLVAHPRFT DKRIGYLGAMLLLDERSEVHLLVTNSLKNDLTCSTQFVSGLALCTLGSICSAEMCRDL ANEVEKIIKQNNAYLKKKAALCAFRIVRKVPELMEVFIPCTRSLLGEKNHGVLMGATT LVTEMCERSPDVLNHFKKLVPNLVRILKNLLMSGYSPEHDVTGISDPFLQVKILRLLR VLGKDDVRVTEEMNDILAQVATNTETAKNVGNAILYETVLTIMEIKSESGLRILAVNI LGRFLLNTDKNIRYVALNTLLKTVHVDYQAVQRHRNVVVECLKDPDISIRKRAMELCF ALMNRTNIAIMTKEVLIFLETADAEFKSECASRMYIATERFSPNHEWHLDTMITVLRL AGKYVPDEVVSCMIQMISANDQLQSYAVSQLYHAAQRDAINAQPLLQVAFWTIGEFGD LLLQPTDVDSTPISESDVISVFETVLPSVLTSLMTKCYGVTALAKLATRFHSTGDRIE ALVRMNQAHIQLELQQRSVEFNVILRLGELRDGLLERMPVITHNSLNAAAPSMIEDDG KKDDLKISSAEIKTFVVSTDATPVTNGDLLGDLNLGSTSDYSADLLGGGGGAPAAPAQ QQQHSNSNILDIFGDSSSLPSSNAGVADLDFGIPAAKESAPTYQPVIAINSKGIEVQI QVIESWRNEQARLKMTAYNYTPRTLTNFNFLAAVTKTFDIALEPSSSPNIEPNEHATQ FMTITRKVPNTAARMRTKISYIVDGSEQVGDGVVNEFPGL" gene <20117..>22027 /locus_tag="CRE_20676" /db_xref="WormBase:WBGene00060868" mRNA join(<20117..20236,20282..20610,20727..20883,20954..21112, 21172..21307,21393..21601,21653..>22027) /locus_tag="CRE_20676" /product="hypothetical protein" /db_xref="WormBase:CRE20676" /db_xref="WormBase:WBGene00060868" CDS join(20117..20236,20282..20610,20727..20883,20954..21112, 21172..21307,21393..21601,21653..22027) /locus_tag="CRE_20676" /note="contains similarity to Interpro domain IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DT936766" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00934.1" /db_xref="InterPro:IPR015943" /db_xref="WormBase:CRE20676" /db_xref="WormBase:WBGene00060868" /translation="MTTEESSQDSMSQMSEPEPESTSKLSLRAERSGIGSLLSSLRGD QLASEINQLSTSAEIDKEKGVRNAPEVSEASKIPEASETTDAQESSEAPTEAPDRPLN RKEKRRLQRLQEEKNQTGEGNSAKRIAPEATIVIEAAEIPTGLKKLYCDSTSFESYEA PFGYKSTSKNNFVHFSIQNNDGTRAIVASQDRCIRMYSLDKNEVQWKHNTGGLVLDTY WEHSGKGVFSTSRLRPIQLFETETGDIIGAYNGKDSGDNIKEAMCVGQSENTLIGGFK NHFQLWDIEYTGSALSTIKYYDQSFNTGITGISMSLVCHPTMPDLFGAVGTTSLLGIY SKKWGNAVSTMEGSSRGYTNCRFSLDGVKLYASERCGDIHCFDTRMNMMTQILKREMT TNHRTRFDIDPSGRLLYSGTSSGAVVVYDLHDFNEEIQPVLSVEHVASRCIPCVSVRG NKMVLCTGQRVFPDDPLLKEDDDVEMMDTTVVATGNSVQVFEIL" gene complement(<22168..>26131) /gene="Cre-eat-18" /locus_tag="CRE_20736" /db_xref="WormBase:WBGene00060869" mRNA complement(join(<22168..22276,22326..22539,22873..23087, 23129..23453,23509..23667,23717..23888,23936..24311, 24357..24481,24530..24680,24733..24894,24941..25148, 25200..25411,25935..>26131)) /gene="Cre-eat-18" /locus_tag="CRE_20736" /product="CRE-EAT-18 protein" /db_xref="WormBase:WBGene00060869" CDS complement(join(22168..22276,22326..22539,22873..23087, 23129..23453,23509..23667,23717..23888,23936..24311, 24357..24481,24530..24680,24733..24894,24941..25148, 25200..25411,25935..26131)) /gene="Cre-eat-18" /locus_tag="CRE_20736" /note="contains similarity to Pfam domain PF00431 CUB domain; contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR002172 (Low density lipoprotein-receptor, class A, cysteine-rich), IPR000859 (CUB)" /codon_start=1 /product="CRE-EAT-18 protein" /protein_id="EFP00970.1" /db_xref="InterPro:IPR000859" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR002172" /db_xref="PFAM:PF00431" /db_xref="WormBase:CRE20736" /db_xref="WormBase:WBGene00060869" /translation="MRSLERIVETRIELLEWDSKETKEDCARCRALDCDIIFALLFTI VIACLLVLIMVFWLKGVLQYEDCDIEYVDIYSEVESVDEDILSSALGGRYCGTVAPHV RISLRHVMKIVLHSRSTNHEDSHGFRAKYSFIPEDKFIAGEPVSGKKCSYIIDSSDRK IGTLYSPTYPGTYPHNMHCSYLMKGYRGERIRLFFTDFDIFFGGEHCPYDSITIFDGP TPSSPIIRKVCGLQQRMEIYSMTNSLLIHFNTTHPAKSDPRGFIMDYEFSSRFVNIDK LLNKQRGVTHIRGTECDVRVESNRETTHTISSPNYPEVYPANTTCTYIIHGLQGEQNL EKVILTFDSIAVLSFDTSPATAPPSVDDIACPSAWVGIAIGEGNMKAVMSSTDDSIFD VTLCERIPSDSPLLGPYISEGPRMVMQFGSTDTRDDRITPIGFKATIEFKTDFGVTGE SLGTSNECRFRFTSSTGFFNSPRYPANYPLDTNCTYYIVGQPGREILLHFEQFALSGD NDNNCNDYLDVYDVFVKNGKEELKLKERYCSDTFPGPSVSAFGSHEMRVVFTSGSSGT ANGFKALFEIRTARKEDVPHGEAHIRRGAYRCGSVINSTSLKPNGLIISPNYPVKYNK DVHCDWQINVKEGYQVLLKMEAIDVEGEMTSDSASCQKAVIRVEGAPRTEYCGTKREF FEAYLSPTNSVRISFLTAPDKVNGLKGFNLSWTEVKNLSGKDESVCKSDSLYLCTYSK LCIDAKLRCNGLDNCGYGVQDDTDEQHCSLKEKTADRTVVIAAIFCGGIFVFICGFFL YLFKKKLERKKKSKRKSDTKHRQRQPYRQQKPMHKQHCDSELSPPATSRFVHHDATGI MPPIPLHQIGSSSRDMYS" gene <30246..>31642 /gene="Cre-unc-95" /locus_tag="CRE_20677" /db_xref="WormBase:WBGene00060870" mRNA join(<30246..30537,30623..30711,30766..30913,30966..31154, 31239..>31642) /gene="Cre-unc-95" /locus_tag="CRE_20677" /product="CRE-UNC-95 protein" /db_xref="WormBase:WBGene00060870" CDS join(30246..30537,30623..30711,30766..30913,30966..31154, 31239..31642) /gene="Cre-unc-95" /locus_tag="CRE_20677" /note="contains similarity to Pfam domain PF00412 LIM domain; contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)" /codon_start=1 /product="CRE-UNC-95 protein" /protein_id="EFP01015.1" /db_xref="InterPro:IPR001781" /db_xref="PFAM:PF00412" /db_xref="WormBase:CRE20677" /db_xref="WormBase:WBGene00060870" /translation="MFPSLHRLFLSNMPTIHSSTILQMTISPQPPHQQFESYQWTTES RSSQQRNGTMTPSQDGRLSAIPDPVERHVARWRSESRNSNKDKVFRNDEEFSQQDEIV NGTLTALKNDVEQTTEIIRRKQEQMRMERRQFQTEMEVNGRITIDPTDDWLAARLKAV SADDMNRQLDTLKQNQRQNAVTDTLAALVYDVNATTEVLRRGQRGRDGEDGSKKRKEE IEYTLRLTPAPEEQIPQRPKIPEDDHLEKDDYSRDYGLQMTEETDSLRRRRARSTTPR RTLHISGSPPPPPAAVCAYCSEEIDGAILTALAPNSERAQKFHTYHFMCTYCQKALNM HGTFREHDRKPYCHDCFYKLYNGLQYAPDDHQASIEKLI" gene <31939..>34189 /gene="Cre-bbs-1" /locus_tag="CRE_20678" /db_xref="WormBase:WBGene00060871" mRNA join(<31939..32193,32293..32367,32412..32811,32849..32988, 33043..33364,33411..33580,33630..33805,33855..34002, 34085..>34189) /gene="Cre-bbs-1" /locus_tag="CRE_20678" /product="CRE-BBS-1 protein" /db_xref="WormBase:WBGene00060871" CDS join(31939..32193,32293..32367,32412..32811,32849..32988, 33043..33364,33411..33580,33630..33805,33855..34002, 34085..34189) /gene="Cre-bbs-1" /locus_tag="CRE_20678" /note="contains similarity to Nematostella vectensis Predicted protein.; TR:A7S5W5" /codon_start=1 /product="CRE-BBS-1 protein" /protein_id="EFP00937.1" /db_xref="WormBase:CRE20678" /db_xref="WormBase:WBGene00060871" /translation="MARSIEENSRKWTAPVLMKSGEVFCPSTCVTLGPIYNESESKLI IGTGGHRGMNMKLRVFKDVDQDEECTLAESPTAIMHFVNEARAVPTIAVAAGSSLLVY KNMKPFYKFTVPSSPIIPTELEAWKAAASNKINPNTLSTVLERLVTDVSFSKLTPMSQ TYILSKSNEDKLALIEKIGGKILNSGTITCIAKLTKSAADIMDILVFGTEHCDVFLID GQAFTIIQQIKLQSVPVTIRTYGMSGYFDVDYRIFVHTRDSLIFSIKRNDTEYKPIIV SQSMITSMILHNKSIVYTTTEDHITFCNFKGKKTGRAKCKDKVWNILLKTRVGITIFQ VKMIEPFYYETKQLSAVIAVFDKELRMYNDSYLLDVTKFQKPLAWVKYGCYGREDSSL IVCFKDGTLGIQIFRRTANFDIRKDFNEVPPAHALKLQIPKKTKIFIDQTQRELEFSS KIHNAYQKHLFNMKFKVAESYLALASSATSSVSTTSSLPIEIAVDINGFGPTHRMTVR LLSSSRQNLYDMQISIICDPEVYEFETPLMMVPILTPGHAYTYTTLLTCKDPERATTS EVRALLIHEKRATPIVTAVIKMPFSEFPLD" gene <34398..>35260 /gene="Cre-ech-7" /locus_tag="CRE_20679" /db_xref="WormBase:WBGene00060872" mRNA join(<34398..34639,34690..34915,34958..>35260) /gene="Cre-ech-7" /locus_tag="CRE_20679" /product="CRE-ECH-7 protein" /db_xref="WormBase:WBGene00060872" CDS join(34398..34639,34690..34915,34958..35260) /gene="Cre-ech-7" /locus_tag="CRE_20679" /note="contains similarity to Pfam domain PF00378 Enoyl-CoA hydratase/isomerase family; contains similarity to Interpro domains IPR014748 (Crontonase, C-terminal), IPR001753 (Crotonase, core)" /codon_start=1 /product="CRE-ECH-7 protein" /protein_id="EFP00951.1" /db_xref="InterPro:IPR001753" /db_xref="InterPro:IPR014748" /db_xref="PFAM:PF00378" /db_xref="WormBase:CRE20679" /db_xref="WormBase:WBGene00060872" /translation="MITLTRTGAAENVALIALNRPNALNALCRQLMQELSETLLKVEH DSSYNVIVLTGNEKAFAAGADIKEMAKLEFADVFQNDFFNNWDTLSHITKPVIAAVNG FALGGGTELALMCDIVYAGENAVFGQPEINIGTIPGLGGTQRWPRFTNKSIAMEICLT GDRLTAQNAKEVGLVSKIFPTQQLVSEAVILADKIAKNSPLIVKTVKNSVNSAYETSL NQGLQIEKQLFQSTFATNDRKEGMTAFAEKRGPKWAGN" gene complement(<35400..>38699) /locus_tag="CRE_20737" /db_xref="WormBase:WBGene00060873" mRNA complement(join(<35400..35504,35551..35781,35828..36325, 36452..37419,37558..37883,38332..38454,38638..>38699)) /locus_tag="CRE_20737" /product="hypothetical protein" /db_xref="WormBase:CRE20737" /db_xref="WormBase:WBGene00060873" CDS complement(join(35400..35504,35551..35781,35828..36325, 36452..37419,37558..37883,38332..38454,38638..38699)) /locus_tag="CRE_20737" /note="contains similarity to Pfam domain PF01545 Cation efflux family; contains similarity to Interpro domain IPR002524 (Cation efflux protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01058.1" /db_xref="InterPro:IPR002524" /db_xref="PFAM:PF01545" /db_xref="WormBase:CRE20737" /db_xref="WormBase:WBGene00060873" /translation="MLAQDFVKKDDRNFTPTQSSRSASYFVVLVLTKILRCIGIFFVD ILAKSSHIVNLLWLCKIICTCILFPLQKPLSAGKSLKRGLLPMILKLSLLNGVIEILW FYGITLCGPLRSVLVFELSSTVLLSAIVSFFKGGAVSTTSKTRGFFLLIVGFVALFLM DKDGTIEDPHHTTHAHHSGLNHLFYHLIGLFGMADHKGGLCILILSLCLRTGYETTFR HLAVEVGGAKRLYTLVTAGSAVILTPVAVLSWALSSSSIASMGFFEYSILLIIVAVFV FVLDFYAESICFQHVADPIMAAARWSSVTMFACAFGLAYLWYGHQNLGDHALTGGVSI TVVCFILGEFLKNFNQIVVNGIEKLNSFFSASISLTHSNAPKHRGGQFVGISNTGLPL FTYGEAFLQKTSKSLMRFMKDTLNEILANNDSRRIFWFLCVNLGFCGIEFLYGFWTNS LGLISDGFHMLFDCSALVMGLVASVMARWPPSKHFTFGFGRVEILSGFINALFLCVIA LFILIEALERLFDPPNINTDRLLFVAVSGLLVNLFGMYSLGEHGHSHGGSSHGHSHGG GGSHSHGHSHGNANMQGVFLHVLADTLGSVFVIISTLLIQWFGWVWVDPLCSLILSLL IIGSVYPLLVSSVNTLLQDIPEEDEFEYHVNEILEIEHVESYSNAHMWQHNDINVASV HVQVKDEANAQMVRHRVANILKSTGAGHSTVQVEKKAFAHRIQQLCPNYKIGYTVVRG SVIRDKTQHGHSHDDGHGHSHDHSGGGHHH" gene <39124..>41083 /locus_tag="CRE_20680" /db_xref="WormBase:WBGene00060874" mRNA join(<39124..39468,39620..40552,40617..40690, 40768..>41083) /locus_tag="CRE_20680" /product="hypothetical protein" /db_xref="WormBase:CRE20680" /db_xref="WormBase:WBGene00060874" CDS join(39124..39468,39620..40552,40617..40690,40768..41083) /locus_tag="CRE_20680" /note="contains similarity to Pfam domain PF07915 Glucosidase II beta subunit-like protein; contains similarity to Interpro domains IPR000886 (Endoplasmic reticulum, targeting sequence), IPR012913 (Glucosidase II beta subunit-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01030.1" /db_xref="InterPro:IPR000886" /db_xref="InterPro:IPR012913" /db_xref="PFAM:PF07915" /db_xref="WormBase:CRE20680" /db_xref="WormBase:WBGene00060874" /translation="MKSQLRIPIILLVSSFFIAHKAEKIDDSIHYYISFTSDSTFIKD PPPLEDSELSDDYVKIMSRNNERFVCKLPHIGPDEKKAIDYSGPTAGKLLETMLYKDS MCSFLIDVYWTYQVCHGRYVRQYHEDKNIAGHVALTEYFLGNFDSALTASTNEHVKPQ TRRIENEDYPYYSVTYNHGTTCDVTGKPRTTDVVYICVAKVQHKILSVTEISSCHYEI VIMTDLLCRHPEYQLSEKKDHKILCWNEDAKNENEAKPKTLQRLDDFHDSTFKREYTI NNEQEHSKLEEREDEGVIDAANFEKLREINQHGYILSGVKRWGNHKNRTFSEIILDFM NFSIRNFRFKTKESLANNPAVVHHTVNRIITGEDCIVGGTGWWKYEFCYGKHVIQFHE DANGQRSDILLGLFDEVVHKEWVKLDPKNRGAIEGPDQIHQIRHIYSKGDICDETQAH RDVEVRIRCATADHSALSFSMHLTEPKTCQYVLTIDSERFCEPLQYADEFGLIEIAPV DGSLSRSPPALMGEPVEEVDNVDGHVSDDEEHEEEDDDDEFKIKEEL" gene <43005..>44168 /locus_tag="CRE_20681" /db_xref="WormBase:WBGene00060875" mRNA join(<43005..43136,43220..43405,43455..43529,43613..43684, 43797..>44168) /locus_tag="CRE_20681" /product="hypothetical protein" /db_xref="WormBase:CRE20681" /db_xref="WormBase:WBGene00060875" CDS join(43005..43136,43220..43405,43455..43529,43613..43684, 43797..44168) /locus_tag="CRE_20681" /note="contains similarity to Pfam domain PF04908 SH3-binding, glutamic acid-rich protein; contains similarity to Interpro domains IPR006993 (SH3-binding, glutamic acid-rich protein), IPR012335 (Thioredoxin fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00942.1" /db_xref="InterPro:IPR006993" /db_xref="InterPro:IPR012335" /db_xref="PFAM:PF04908" /db_xref="WormBase:CRE20681" /db_xref="WormBase:WBGene00060875" /translation="MNFVFEQVVVPHSSFFMLVNSFFSESFRMAPLKVYVASATANPE TKYRVQRTLMILDGLGIPFDSIDITKPEHAEQRRFMRENASKKGPNGAVLPPQFFYED EYLGDYEDFDTSVEADTITEFLRLLPDAIGNRIRVNDANKCVAALFSKSQNKGESNVP TNGAEKPEENTDGGTAAAKSDEKKTEDEEDEEDEEWDEDEAEGEDEEENEDGEKKKKD SEEVKKEEDVEAETTETITLATPKSATSEDVKKDSEEVDDEELEGEDEEWDEEEEEEE EA" gene complement(<44785..>49283) /locus_tag="CRE_20738" /db_xref="WormBase:WBGene00060876" mRNA complement(join(<44785..44970,45018..45123,45169..45306, 45355..45519,45567..45661,45706..45887,45938..46046, 46096..46243,46332..46567,46609..46869,46926..47194, 47242..47549,47634..47735,47811..47872,47923..48018, 48116..48214,48262..48387,48432..49087,49202..>49283)) /locus_tag="CRE_20738" /product="hypothetical protein" /db_xref="WormBase:CRE20738" /db_xref="WormBase:WBGene00060876" CDS complement(join(44785..44970,45018..45123,45169..45306, 45355..45519,45567..45661,45706..45887,45938..46046, 46096..46243,46332..46567,46609..46869,46926..47194, 47242..47549,47634..47735,47811..47872,47923..48018, 48116..48214,48262..48387,48432..49087,49202..49283)) /locus_tag="CRE_20738" /note="contains similarity to Pfam domain PF01433 Peptidase family M1; contains similarity to Interpro domains IPR014782 (Peptidase M1, membrane alanine aminopeptidase, N-terminal), IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR001930 (Peptidase M1, membrane alanine aminopeptidase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00997.1" /db_xref="InterPro:IPR001930" /db_xref="InterPro:IPR006025" /db_xref="InterPro:IPR014782" /db_xref="PFAM:PF01433" /db_xref="WormBase:CRE20738" /db_xref="WormBase:WBGene00060876" /translation="MQASPPPPPTSSAAKMLYEEGETHDGLTIWTPSNPYRVRSSHRR ARICVAITFGILMFGLGFSAGGFLHAIVFPDGSSSIIKIPSFLKSSDSFEVDNSTLIR LSDVGNSVELEDTTIVSEEREEEEDEDDDKGKKVNSKSSEDEEDSDSDSNGEKENEED ENEEEDEEKKKVKIEEESNKKKRRGKKEPKVNSDKSEHEENEVEETEKEEEKEDENEE ESEKKEKVEEKVEEEEESGDKFVKANKECTNITWYSSRLPRTAEPIEYELTLHPNLTN GEVDAEVTIRILIKSETKLLILNAENLEMVSYEISKKGSKLKADFIKCEVMTQWAWKF GKRLHKGDHIKLKIKYTSQMKSDLQGLYFSTHLGTDGKKTKSAATQFEPTFARKMLPC FDEPNFKATFQVSIIRNANHIARSNMNLLMSKEYKDGLIKDEFEKSVKMSTYLLAVAV LDGYGYIRRLTRNTTTPIEVRLYAPEDMLVGQAEFGLDTTIRALEFFEHYFNISYPLD KIDLLALDDFSEGAMENWGLVTFRDSALLFNERKASVVAKEHIALIICHEIAHQWFGN LVTMDWWNEVFLNEGFANYMEYKCVDELFPDWSIMSRFYAENLAFSQEPDGFLSSRAI ESDDDDSLLNLFDAINYHKAAAIIHMIAEMAGQKNFQSALIEYLNKYAYDNAIGVDLW KIVEKHANLQGTVSIPDLAKAYTTQVGYPLITVERVDDGILVHNQTRFLFAEGDKAEE KRGDWKWPIPISYRQDSVRNGAETVYCNICSVSVTWETTSNDWLLLNTGGVGYFKVLY DSETYGKLIKELKNNHSAISPIDRSMIIVDSYDLSKTSLLNISVYMDLLEYVEKETDK MTWSIVSKQLRTIESLIEDSDYLDIFQDFQRSIIMKLYESLDWDEQGATPNQKRLQVD IFAVACRLRIKDCTKQAYQRYLKWVSSGVRNPEHHMIALMEGVKQGGTTAWERIWKAY KTAISPSEKNNIIGALTSTKDVTLINRILKYCLDGKIKANLIPRVFSYFALNQHTRNT VWKYFKSHFNEFHVILGKGSLMASCVKCLAEPLSTENELEELQEFLKSQKFEEDGQIK MEMTYEQIELNIQWRKLNEAQLGKWISKWDERRRTLYRRKRHRHNSRHIVSAF" gene complement(<50895..>54737) /gene="Cre-src-2" /locus_tag="CRE_20739" /db_xref="WormBase:WBGene00060877" mRNA complement(join(<50895..51106,51639..52191,53037..53107, 53269..53466,53889..54010,54310..>54737)) /gene="Cre-src-2" /locus_tag="CRE_20739" /product="CRE-SRC-2 protein" /db_xref="WormBase:WBGene00060877" CDS complement(join(50895..51106,51639..52191,53037..53107, 53269..53466,53889..54010,54310..54737)) /gene="Cre-src-2" /locus_tag="CRE_20739" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00018 (SH3 domain), PF00017 (SH2 domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR001452 (Src homology-3), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="CRE-SRC-2 protein" /protein_id="EFP00976.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF00018" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE20739" /db_xref="WormBase:WBGene00060877" /translation="MGSCIGKEDAPGATTPVHTSSTLGRDTLPSHPRIPSASGGIISS STLTSSSGNVVDKNQNVAQSLTFVALFQYDARTDDDLSFKKDDVSFHLRLSKYIYDIQ ILEILNDTQGDWWFAKHKATGRTGYIPSNYVAREKSIESQPWYFGSIRRLDAEKKLLQ NLNEHGAYLVRDSESKQHDFSLSVREDDSVKHYRIRQLDHGGYFIARRRPFATLHDLI SHYQREADGLCVNLGKPCVKSEAPQTNTFTYDDQWEVDRRSVRLIRQIGAGQFGEVWE GRWNGNLPVAVKKLKAGTADPTDFLAEAQIMKKLRNPKLLSLYAVCTKDEPILIVTEL MQDNLLTFLQRRGRQYQMPQLVEISAQVAAGMAYLEEKNFIHRDLAARNILINNGLTV KIADFGLARILMKENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVT YGRLPYPGMTNAEVLQQVDVGYRMPCPAGCPPALYDIMQQCWRSDPDKRPTFETLQWK LEDLFNLDSSEYKEASMNF" gene complement(<56158..>56795) /locus_tag="CRE_20740" /db_xref="WormBase:WBGene00082931" mRNA complement(join(<56158..56501,56723..>56795)) /locus_tag="CRE_20740" /product="hypothetical protein" /db_xref="WormBase:CRE20740" /db_xref="WormBase:WBGene00082931" CDS complement(join(56158..56501,56723..56795)) /locus_tag="CRE_20740" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01004.1" /db_xref="WormBase:CRE20740" /db_xref="WormBase:WBGene00082931" /translation="MSSSNSSPTIPASDEVTAKGNKKKVPVDGKKRIVVTDDTEHIVV HTLDIPNNDPPENGSFESKPNVSNQKLAKQGEQHWKLELLGIEPPKVVCKKLDLMNIS SNTRRNDIFEMRKIHLPYTCHYSYVALFLLYSFKAP" gene <60256..>63979 /locus_tag="CRE_20682" /db_xref="WormBase:WBGene00060879" mRNA join(<60256..60376,61079..61200,61251..61320,61401..61508, 61556..61710,61891..62020,62743..62951,63028..63133, 63181..63573,63618..63807,63856..>63979) /locus_tag="CRE_20682" /product="hypothetical protein" /db_xref="WormBase:CRE20682" /db_xref="WormBase:WBGene00060879" CDS join(60256..60376,61079..61200,61251..61320,61401..61508, 61556..61710,61891..62020,62743..62951,63028..63133, 63181..63573,63618..63807,63856..63979) /locus_tag="CRE_20682" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PKS2; coded for by the following C. remanei cDNAs: DT936412" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01062.1" /db_xref="WormBase:CRE20682" /db_xref="WormBase:WBGene00060879" /translation="MIILLSLFLLPRDIGSLPIEPKTLFLDPSPRRFDRLITSVERKI GESDIIHPSVCPSSCEHLHQAMTYIQNHTDANFSIKECSCICPMSRPAYVSTAGSCID RLNECPNTIRWKSINSAIPVVQLQPHTIILPESELDFRSAGIRISPRGADEWNCGIRK IMYENLNTKWRAIAKERGIFQLTSSNGKPIVYFGGTEFDASFLVGAVVMIKLDCRTFS SPTDSPFCISLRIAGTSGTSSTFDHKQFEMEETGWRVESIYFLVIVALIVIVIIITFI VWNICWSMKKRKLISDFQMQFVQQYKNHNGSHHSSITEFEEIDDQEILQSHSQSLNRK RLIFSAEYFDPGQMTHPSPLAIQFLYDLRRVVDIAKERIRQRRFIPALPIILEDADNE KSYEDEEIEEKRRIQEPTTSEESLMNATTTPESSPRSEQKSVDSGRESKDDSEEDGDE VEERKEEIIPKAQTKVSDIVKSFEKSTKPTTVPPRPSYVPIMLNSSMRKKKQPLTTAP TTVTVEQPEPAFRSRIKAPTAFTERRSPRERKGYAVFPSDGTFNKSLPRRGKRNPSAN SSQPQTPTN" gene <64719..>66000 /locus_tag="CRE_20683" /db_xref="WormBase:WBGene00060880" mRNA join(<64719..64871,64915..65023,65248..65582, 65632..>66000) /locus_tag="CRE_20683" /product="hypothetical protein" /db_xref="WormBase:CRE20683" /db_xref="WormBase:WBGene00060880" CDS join(64719..64871,64915..65023,65248..65582,65632..66000) /locus_tag="CRE_20683" /note="contains similarity to Pfam domain PF02535 ZIP Zinc transporter; contains similarity to Interpro domain IPR003689 (Zinc/iron permease)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01046.1" /db_xref="InterPro:IPR003689" /db_xref="PFAM:PF02535" /db_xref="WormBase:CRE20683" /db_xref="WormBase:WBGene00060880" /translation="MYGRIVSRLTERVFDKSVWEGVHGGERAEPKDALRAVLLIVLFA LTFAAGMVATFLKGEWARSHILSFVSCIGGGVFLGACLLDLLPDSIESFEKTKLATDF PVPLAFVAVGFLLVLSIDQVVKAARERNVFGNVGYHIHSHDHEQRLEEREHLHGEGGD EEVAQSGIGVAMLVLALSVHALFEGLSLAVTSDASQLLQIFGALILHKCIMGFCLGVR LVQANLTTPWIALAQFLFSVQVLIGGLAGIGIMKFISGGEQSFAAIVSSVLQAIACGT FLYITTFEVIPHELHNGKFRVLKTLFIYFGFGIVVAFILIFPEAS" gene <66702..>73977 /locus_tag="CRE_20684" /db_xref="WormBase:WBGene00060881" mRNA join(<66702..67491,67571..68390,68448..68912,68990..69648, 69726..70196,70249..70703,70750..71779,71824..72888, 72960..73600,73648..73893,73939..>73977) /locus_tag="CRE_20684" /product="hypothetical protein" /db_xref="WormBase:CRE20684" /db_xref="WormBase:WBGene00060881" CDS join(66702..67491,67571..68390,68448..68912,68990..69648, 69726..70196,70249..70703,70750..71779,71824..72888, 72960..73600,73648..73893,73939..73977) /locus_tag="CRE_20684" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PU82" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00989.1" /db_xref="WormBase:CRE20684" /db_xref="WormBase:WBGene00060881" /translation="MFRYIDFILSRIISCITKCEVRIGGVGFVRLEDVTIRIAWLSIH IDVISLRRDAAHPTRFCILRLDDVRIEAEKDSGRTGETSRSSTSPGASLWIQRFTRIA QYCGLVVNRVHIVVMNTIPDCLLHVTIDELSLETFRSREGWQFETSCSLIQGKLLRRN SRSGSLLAEVSMPFQLSLDIDKDIIENVSLRISTPSFAFTDDFLHVLEGIVAAKNAGN KKSPKDPEDVIPAQPKNLIEKLIQLNVDMRSISIKYTVSCGAESHGGTENRYITTNIK QILATRSSFQVTELNIADQLLRSEIKLNSVQYEMQKEESDPGIRQIRSGIEGIHAKIS FHDLQWWKINFEKEEKILKFLKRINDNSEKIEQQKMESLQNINTNISFEISDFCCDIL DFDHHKSQAKMGFLSFDKVFSLPSESSESSESSESSVSQFPRYEVGVELLFFGTVPPD SPQFELHRWGESVFVGALIVQWSITQNLIDITVGCDDLKFEWSDRLARQIEGVLNGMM IERNVEQNSKPEVRRSDMKCVAIQVSVNRVAALVDVSNKSFGALTSSKLELVTENFQN DRLFKIEMIRGATGLRSGKDHIYLADIFESERIRPHNSEDEEEKHGSPTRRWSQLERE KNYKEERENREKGMYFKQFISVDYLEVSVDKEAPVIDKISLFTPNEIYLAWSPQLHLI GFHAFKSVKGTIQLLASSTTSKKPTRQVPRKKHIILTADDFVEVQIELARNHRMFWQG EKFNLERFDNQMRMSTEMLYILMNEQRVISVLNASIVVQNHDEMMSQSRDAFSTLQAK YNKVWNWTADKFHFRLPFDFNFAEIFTEFSNIIKWIKVVHEVKKSEFTENSPLPSDVR IEFHEVCLELEDDEFENRLKLSAQLKEDEVYESERREQLLEERLFNLKKTAPFLSKEM IETIKQTLFEKNSEIYIERWKMTEISDAPLFLSKWKGWSMRAFADISLHGTEKCIQMM KAFDPLSPIPEQKYSTLWARAVEFDVDEWTVTFKDYPMNYLDIKDLHFFGTLVAAESI ADDGRCLRECTIPLPEPFPTHTVQRNMSPLKFYYDLQCASTEYNCTYGPCWEPCLSMI SLVWNSISAPSIDPSQPLPFWDKMRFLLHGKLLWSSEKLVTTMLASNDPYNETETVEM LWEDFGLDWALGEIRIKSGLKIFLRTASRYDDSQILSLPDVRLKVLLGWECGGDPHEH HAVQLCAPHRLPHYSSTEEHDSYRQFRSSCVNVTLNFDVSPGSCTSNEKMPNLLLYSN TFRWIEQFLKSLTTKNRNVRRGKVFGNRVLLKPQLSKHFGKLQFSFSLPKVLVTYWMS HSSSYGFRVFSDGLQLTASFRQTVQHSSVNRVSVYKNISSVAPTFFLQEMNVQRRKVY SWSTHHMTCTWWATQIHVYGGESRPPSDGSPSEDTFLLGFGRVQYARETFPGKDVPLH KVTAFDLKMAWTAENRDACLTIADGVHRAHMLRRILSNDAVKTLNVHLEELVDTKPKD PTPKKEEHQKTHRRGYSVTEANPWMLTQLIDEVGTKLVAHCEQASDVPIDSLIGVHQS TMDDVKLINWQIDLFNSQLVLKGCERDGFLLVCAAKSQLLQNVSYCKLFISLISLLQF HRNVWKRSLLLSKKSWSAKLSGMQYFAPISLSASGTNKEKFRWLPREVIDDKTQDASG FADDFVQKFTAAGEAVGGVVQSEVPEKNSEENIQLQRIVSRCSCQIYFCYFSDELKTD SSEDISVPPQVDPKHQTLDADAVGIDVLTLKHNMLEATSNSEQYEMVVDIVNNLALFV DPNKKEMGEKRRRLRFECQLMGMAEMRAKIMRYQSELREIVSLGRYLERQLFYLNNQG NQADNSSASDQIIEYTEEQLVQEAEETKQRMLTVSEKLATYISSYKQRQVNQVKEYDE KSAKKGVEVVRRFEVCFEDCIWKLTESDGQIALAQTQIRNFLYTRTVRDSNCGDHLFE VGSVRITNLLPDTLYKHALHRDETHHSRQPAIRLYVRDMPPVGGISVKEHFELNIAPM VAEITHRLFDKMMRFFFPGRNIHTNDSLESEEDNSVSFFIFSHFQLPLTMFQTFSFTR KIASTLSMRSNKSASEKLMLQKSLYEKDDIDRMKERADKVNHFMYIKIPEVSFVVSYK GNKDKNLIDVNQFNFIFPLCEYHEQNWTWLDLALAVKQRCKRVLLQQFMRQKLLRNRI SNFSIDPTPQGVSEDEKKRIAVGITTSDQKSLKAPK" gene <74760..>75488 /gene="Cre-cyn-5" /locus_tag="CRE_20685" /db_xref="WormBase:WBGene00060882" mRNA join(<74760..74963,75081..>75488) /gene="Cre-cyn-5" /locus_tag="CRE_20685" /product="CRE-CYN-5 protein" /db_xref="WormBase:WBGene00060882" CDS join(74760..74963,75081..75488) /gene="Cre-cyn-5" /locus_tag="CRE_20685" /note="contains similarity to Pfam domain PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; contains similarity to Interpro domain IPR002130 (Peptidyl-prolyl cis-trans isomerase, cyclophilin-type); coded for by the following C. remanei cDNAs: DR777422, DT934977, DR406228, DY528129, DY528323, DT935399, DR781356" /codon_start=1 /product="CRE-CYN-5 protein" /protein_id="EFP01023.1" /db_xref="InterPro:IPR002130" /db_xref="PFAM:PF00160" /db_xref="WormBase:CRE20685" /db_xref="WormBase:WBGene00060882" /translation="MKSLLILAAVLAVGVFAQDDAKGPKVTDKVYFDMEIGGKPIGRI VIGIFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVIEDFMIQGGDFTRGDGTGGRSI YGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKVLEGM DVVRKIEKTEKLPGDRPKQDVIIASSGHIAVDVPYAVEREGVN" gene complement(<75713..>78974) /locus_tag="CRE_20741" /db_xref="WormBase:WBGene00060883" mRNA complement(join(<75713..75836,75881..76073,76250..76877, 77070..77458,77510..77826,77873..78267,78345..78643, 78854..>78974)) /locus_tag="CRE_20741" /product="hypothetical protein" /db_xref="WormBase:CRE20741" /db_xref="WormBase:WBGene00060883" CDS complement(join(75713..75836,75881..76073,76250..76877, 77070..77458,77510..77826,77873..78267,78345..78643, 78854..78974)) /locus_tag="CRE_20741" /note="contains similarity to Pfam domain PF03828 Poly(A) polymerase; contains similarity to Interpro domain IPR002058 (PAP/25A-associated); coded for by the following C. remanei cDNAs: DR408522" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00999.1" /db_xref="InterPro:IPR002058" /db_xref="PFAM:PF03828" /db_xref="WormBase:CRE20741" /db_xref="WormBase:WBGene00060883" /translation="MTRKRKIARRLTAPDRTPLQTLRFIGERLNHPLIINDLEPKTYR GQEVSPSPDVKRIMCFAGIPSCVLSSKGTGARENLADESAAHAMLDFFRLAVSPEFVN KLCACKDDDAVLELLPQVTPVFEQFDKAISVDFLSINRCTQLEMSPSSLLRGREIKKR VLVNTKNPSVGYELEASTTPKPNRKKDKLSPNETTQDESNNGTSNELITISSGDSRSS SCSADIIIVSENIKVRKMEPMSPIKSPSPQVESMRKVDDAQKSCMAGEFVRQSRDRRE EGIDSSTYFGQINTSNQGPADVFCCLPDPNPVRYNEDPYSDDSEDEGEKAVPSKRART DVDETDNEVIILNTSSASLNPLGEASTSGESVLSKKNPESRVKDSDEEIGDMVDEWDE NDDIEILEQDSGDQEVTTTTSPTTAQNGRLFDGHPNHQSFMKAHGLSVHYQAKTIGVV VNKKLSDSVERFVESVCERSLDSVKKLSSLAWDHYRHNTQSDATYNKKMNARQTLLNE IQQLFPDKFINLQVTGSTINGCGAFNSDVDMCLCYPTNSYRGYVFDDFGNDRSNSTKV LRKLDRAIKRTKYGQPLKNLIYRCEMIPAKVPIIKLKLNGIFKELEVDINVNNIAGIY NSHLTHYYSLVDARFPVLALLVKHWAGANYINNAQAGYLNSYTVILLVVHFLQCGVSP AVLPNLQYVFPDKFDKKLPLDELLLYGDISDKLPVSVPNTWSLGELFIGFFHYYSNFD FEKYAISIRSGQVVPRSLLPRDTANYPMFIEEPFDAINTARSVRTSEHMKQIKREIRK GLSVFNAQKFTMRDLRVAVWGDT" gene complement(<79649..>80398) /locus_tag="CRE_20742" /db_xref="WormBase:WBGene00060884" mRNA complement(join(<79649..80218,80267..>80398)) /locus_tag="CRE_20742" /product="hypothetical protein" /db_xref="WormBase:CRE20742" /db_xref="WormBase:WBGene00060884" CDS complement(join(79649..80218,80267..80398)) /locus_tag="CRE_20742" /note="contains similarity to Pfam domain PF00560 Leucine Rich Repeat; contains similarity to Interpro domain IPR003603 (U2A'/phosphoprotein 32 family A, C-terminal); coded for by the following C. remanei cDNAs: DY524939, DR779846, DT935880, DR781932, DY527408, DR776970, DT936266, DY529085, DR408106, DR778129, DY524739, DR776718, DR777464, DY526520, DY527161" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01052.1" /db_xref="InterPro:IPR003603" /db_xref="PFAM:PF00560" /db_xref="WormBase:CRE20742" /db_xref="WormBase:WBGene00060884" /translation="MPSMVEKYSVELRERDPETVDTLFLDNSDDGKIGGINDKLTNLT MLSMVKCGLTTLTGFPNLPALTYLDISDNQLGDEANFDILVRNAPELERITLAGNKLS LDNMRSLKMLPKLSELDLTNNAALGLLEEYRAKVFEMIPSLKILDGCDIDGDEVEEEF HGEGGEDSGEESAEEDGPGLSYLDKSQFSDDETDDYVPEENGAEARGTKRAASGDDDE DNEEPDVKKAAADEE" gene <81831..>83242 /locus_tag="CRE_20686" /db_xref="WormBase:WBGene00060885" mRNA join(<81831..81863,81914..82105,82257..82351,82402..82495, 82541..82691,82791..82915,82961..83083,83138..>83242) /locus_tag="CRE_20686" /product="hypothetical protein" /db_xref="WormBase:CRE20686" /db_xref="WormBase:WBGene00060885" CDS join(81831..81863,81914..82105,82257..82351,82402..82495, 82541..82691,82791..82915,82961..83083,83138..83242) /locus_tag="CRE_20686" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8QC14" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00932.1" /db_xref="WormBase:CRE20686" /db_xref="WormBase:WBGene00060885" /translation="MPSTSKGGILKSEATYFFVLELASAFVLSAAHNVLFFVLDIKLI ATSFAQFFFTFLFLKLIHFANYIPQAHIPKKVILPAAGAKLLEVLIGSLANSHNRTGE LYLVRIFDFLFAGCVLFYFSSRQNGKALTKTDCWLVAPLAIAVSISWLEPGQIEYTGV SLISAFILPFSRALSFILLKNSMDFMGKGHINAFMLDYTRLVTILLFLPALLSYSMSS VEVTASWESIDYVLMSLSFIFMICNLYSQLWLTLSLSPNVYLVFENSRNLLASCAQWI IQNMAHPSLIAFGAKLVGLSSIFRIWTRS" gene <84194..>85895 /gene="Cre-set-10" /locus_tag="CRE_20687" /db_xref="WormBase:WBGene00060886" mRNA join(<84194..84385,84456..84603,84652..84732,84780..85003, 85100..85321,85372..85613,85694..>85895) /gene="Cre-set-10" /locus_tag="CRE_20687" /product="CRE-SET-10 protein" /db_xref="WormBase:WBGene00060886" CDS join(84194..84385,84456..84603,84652..84732,84780..85003, 85100..85321,85372..85613,85694..85895) /gene="Cre-set-10" /locus_tag="CRE_20687" /note="contains similarity to Pfam domain PF01753 MYND finger; contains similarity to Interpro domain IPR002893 (Zinc finger, MYND-type)" /codon_start=1 /product="CRE-SET-10 protein" /protein_id="EFP00946.1" /db_xref="InterPro:IPR002893" /db_xref="PFAM:PF01753" /db_xref="WormBase:CRE20687" /db_xref="WormBase:WBGene00060886" /translation="MYTLARENPLAAVLCPQFQDFYCATCFAELDVNGEAEILMCDDC SEVSYCSLKCQRKDWRSVHQFECEILRTQNNQTPMTTTMRLCIRTLLVTLRNSERSPS FNGAIIEDLETNYKEFRSSPSHNQFLSDLVTIIKSVGHNVFPKSVETNKMIAIICTVL CNSFGIIDDKRVEPIGSGLFVGLAKHNHSCASTSHVVFEKNQVLLRGRDMDYCKSTTI SYVSRMLPTFERQKSIRSVHFITCRCEMCRNDDLDFIGLASRCQTVNCSGYVKGSDSC GVCKKPAVIPIMESASSTSKLIDILDNLHKSNEFDCTTQYDYLQNLRKEYIRILADCN VAILQLDEQIAYCASDLKKIPDDLTEIAVRGCQHFIDRLGIGALEVTRRLYIACKCLS LLPSSPSSEIHQLAIQSSILSHGEDHSITKYLNDLTNGCDISDD" gene complement(<85989..>88099) /gene="Cre-unc-122" /locus_tag="CRE_20743" /db_xref="WormBase:WBGene00060887" mRNA complement(join(<85989..86154,86234..86476,86520..86946, 86995..87090,87141..87369,87411..87686,87732..87854, 87927..88002,88056..>88099)) /gene="Cre-unc-122" /locus_tag="CRE_20743" /product="CRE-UNC-122 protein" /db_xref="WormBase:WBGene00060887" CDS complement(join(85989..86154,86234..86476,86520..86946, 86995..87090,87141..87369,87411..87686,87732..87854, 87927..88002,88056..88099)) /gene="Cre-unc-122" /locus_tag="CRE_20743" /note="contains similarity to Pfam domains PF02191 (Olfactomedin-like domain), PF01391 (Collagen triple helix repeat (20 copies)); contains similarity to Interpro domains IPR003112 (Olfactomedin-like), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-UNC-122 protein" /protein_id="EFP00973.1" /db_xref="InterPro:IPR003112" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF02191" /db_xref="WormBase:CRE20743" /db_xref="WormBase:WBGene00060887" /translation="MVPSDEETSRRRSRRLVIAGEIGNALLIGVLYLHALLWLNTLNC EISEFKPSPVRIKRDTKQLPVDLEDYTIIIGQDTIIPKNVLDRSCSQVHQYCSEKSQR LTGFPGARGSPGDQGPVGPPGRRGPMGIVGPIGLVGEHGSVGEAGRDGKCNCPFPDMY VQRVPIPGPPVIKIEEKMVPVPVVVVKEIEVTKLVPFEPTPPGFGPPEGWAPGMPKPG RTRKLPRYSTVRPPPTPKKKTTQPPIHVVPTEKNLTMDEWNAEMNISTPRPYMGPPTL GYNRKECILAAVGIPVLHAESQYGRVGSWMRDALPNSMKTAKRRWVTDGFASPVLYEY EDERQLLDKVQKIKYYVDYLASGTGNVVYNGSYYYHKHGTTSLVRYELETGVQVEAEL DPDMSHVDCGRLPDHTFEECNATDRHVWLYDRPHNYVDFAVDENGLWVIYAGADSETM KMAKLEPDLYVVSRWDVEVNTTDIADSFIMCGVWYGLKSAYNLQTQITHAFDLYRNDT IPGQVEWYNPYQGLTMLHYNPLDARLYFFDNSSLLSVNVRIEEDLPEYIDE" gene complement(<89029..>91218) /locus_tag="CRE_20744" /db_xref="WormBase:WBGene00060888" mRNA complement(join(<89029..89451,89658..89874,90001..90412, 90566..90745,91137..>91218)) /locus_tag="CRE_20744" /product="hypothetical protein" /db_xref="WormBase:CRE20744" /db_xref="WormBase:WBGene00060888" CDS complement(join(89029..89451,89658..89874,90001..90412, 90566..90745,91137..91218)) /locus_tag="CRE_20744" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01056.1" /db_xref="WormBase:CRE20744" /db_xref="WormBase:WBGene00060888" /translation="MSSCPSCVHCQGDKRVAAASAALAEQNDVPVVDPAHYLNRVPLL RDDQKKIAMEICHIWKDQKLSCIEGIAGTGKTYLLNAMRTLFKNVNLQTEFISSCQHH PAKQMKKLLGQRDEALENVDVFIIDNGNQITKEELDCLHHKLQRAMISDEIFGGKTVI MAADFGLILPVSAEFKNKLNSSLKNFVGIGQFKKYILETLDNDWGNFLNSVRKDPEIQ IPQGNIVKSVDELIEFTFGPLNAVPPNPKSIILVAKNLDRDLINKKVLDKMKKRVIII EAQHTSNIIRSDLELHQLRLKKGCILVLEEPAEGFPKGTRLVLEDVTRSHLNCRTVET NQCVDLERVKRFLSPSTKSPSKNKNNKAQGVQSVIQFPVSLGFGSTIHRCQSTQFEKV GLFKVDQPFEHGMVYSALSRATGAAGWRIAGEGSVIKNKVENSLI" gene complement(<92517..>94575) /locus_tag="CRE_20745" /db_xref="WormBase:WBGene00082941" mRNA complement(join(<92517..92924,92982..93198,93269..93689, 93889..94071,94488..>94575)) /locus_tag="CRE_20745" /product="hypothetical protein" /db_xref="WormBase:CRE20745" /db_xref="WormBase:WBGene00082941" CDS complement(join(92517..92924,92982..93198,93269..93689, 93889..94071,94488..94575)) /locus_tag="CRE_20745" /note="contains similarity to Sulfurovum sp Putative uncharacterized protein.; TR:A6Q8R4" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01060.1" /db_xref="WormBase:CRE20745" /db_xref="WormBase:WBGene00082941" /translation="MPCEHCPHCKEQEAIAAVLAERMSQNSFEDFPNVVQELQPMEEV PPLNPCQQPVALDICNNWKEQKLHFIEGNANSGKTYLLSAMWALLKNMELNVEVISSC PFPRQSKPILKFLALPDEYIEEIDIILIDNANQITEQLMKSLSEKLKRVMSTDAPFGG KTIVLAADFGQLLPFGDFKNKSKSTLKHLTENIVAPFKKHTLVVQHQDDWSLFLDNAR KSTKIAIPTTNIVKSIDELIEYTYGPLYTEPPHLHSMILTPKKNDVDLINKKVLEKIK GKELVLEALFNGKKIRSDLDLHELRLKKGSILILEEPFEGLAKGTRLFFEDYDRTHLN CRVIENNKLVDIERVNRFLAPKSPRKSFKEEQQSVKQFPVALGFASTIHTCQGRRFVN LGLFKLNQCFEHGMLYTALSRVGRFEGFRVLADDNIIENKLEPSLV" gene <99596..>108355 /gene="Cre-unc-54" /locus_tag="CRE_20688" /db_xref="WormBase:WBGene00060889" mRNA join(<99596..99658,100263..100391,100447..100587, 101282..101738,101834..102618,102669..103914, 105052..107525,107572..107787,107840..108064, 108146..>108355) /gene="Cre-unc-54" /locus_tag="CRE_20688" /product="CRE-UNC-54 protein" /db_xref="WormBase:WBGene00060889" CDS join(99596..99658,100263..100391,100447..100587, 101282..101738,101834..102618,102669..103914, 105052..107525,107572..107787,107840..108064, 108146..108355) /gene="Cre-unc-54" /locus_tag="CRE_20688" /note="contains similarity to Pfam domains PF01576 (Myosin tail), PF02736 (Myosin N-terminal SH3-like domain), PF00063 (Myosin head (motor domain)); contains similarity to Interpro domains IPR004009 (Myosin, N-terminal, SH3-like), IPR002928 (Myosin tail), IPR001609 (Myosin head, motor region); coded for by the following C. remanei cDNAs: DR777440, DY526766, DT934000, DR407809, DT934918" /codon_start=1 /product="CRE-UNC-54 protein" /protein_id="EFP01019.1" /db_xref="InterPro:IPR001609" /db_xref="InterPro:IPR002928" /db_xref="InterPro:IPR004009" /db_xref="PFAM:PF00063" /db_xref="PFAM:PF01576" /db_xref="PFAM:PF02736" /db_xref="WormBase:CRE20688" /db_xref="WormBase:WBGene00060889" /translation="MEHEKDPGWQYLRRSREQMLEDQSKPYDSKKNCWIPDPEEGYLA GEITATKGDTVTIVTARGNEVNLKKELVQEMNPPKFEKTEDMSNLTFLNDASVLHNLR SRYAAMLIYTYSGLFCVVINPYKRLPIYTDSVARMFMGKRKTEMPPHLFAVSDEAYRN MLQDHENQSMLITGESGAGKTENTKKVIAYFASVGASQQEGNAAADPTKKKVTLEDQI VQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFSKHGRLASCDIEHYLLEKSRVIRQAP GERCYHIFYQIYSDFRPELKKELLLDLPIKDYWFVAQAELIIDGINDVEEFQLTDEAF DILNFSATEKQDCYRLMSALMHMGNMKFKQRPREEQAEPDGTDEAEKASNMYGIGSED FLKALTKPRVKVGTEWVSKGQNCEQVTWAVGAMAKGLYSRVFNWLVKKCNLTLDQKGI DRDYFIGVLDIAGFEIFDFNSFEQLWINFVNEKLQQFFNHHMFVLEQEEYAREGIQWT FIDFGLDLQACIELIEKPLGIISMLDEECIVPKATDLTLASKLVDQHLGKHPNFEKPK PPKGKQGEAHFAMRHYAGTVRYNCMNWLEKNKDPLNDTVVSAMKASKLNDLLVEIWQD YTTQEEAAAKAKEGGGGGKKKGKSGSFMTVSMLYRESLNNLMTMLNKTHPHFIRCIIP NEKKQCGMIDAALVLNQLTCNGVLEGIRICRKGFPNRTLHPDFVQRYAILAAKEAKSD DDKKKCAEAIMSKLVNDGSLNEEMFRIGLTKVFFKAGVLAHLEDIRDEKLSTILTGFQ SQIRWHLGLKERKRRMEQRAGLLIVQRNVRSWCTLRTWEWFKLYGKVKPMLKAGKEAE ELEKINDKVKALEESLAKEEKLRKELEESSAKLVEEKTSLFTNLESAKTQLSDAEERL AKLESQQKDASKQLAELNDQLADNEDHASKQLAELNDQLADNEDRTADVQRAKKKVEA EVEALKKQIQDLEMSLRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEIN RKLMEDLQSEEDKGNHQNKIKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKI AQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISELE EELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELAKLRRD LEEANMNHENQLAGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVHDAEDLAAQL DQETSAKLNNEKLAKQFELQLTELQSKADEQSRQLQDFTSLKGRLHTENGDLVRQLED AESQVSQLTRLKSQLTSQLEEARRTADEEARERQTVAAQAKNYQHEAEQLQESLEEEI EGKNEILRQLSKANADIQQWKARFEGEGLLKADELEDAKRRQAQKINELQEALDAANS KIASLEKTKSRLVGDLDDAQVDVERANGVASTLEKKQKGFDKIIDEWRKKTDDLAAEL DGAQRDLRNTSTDLFKAKNAQEELAEVVEGLRRENKSLSQEIKDLTDQLGEGGRSVHE MQKIIRRLEIEKEELQHALDEAEAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEF ENTRKNHARALESMQASLETEAKGKAELLRVKKKLEADINELEIALDHANKANADAQK NLKRYQEQIRELQLQVEEEQRNGADTREQFFNAEKRATLLQSEKEELLVANEAAERAR KQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDETLNEYKAAEERSKK AVADATRLAEELRQEQEHSQHVDRLRKGLEQQLKEIQVRLDEAEAAALKGGKKVIAKL EQRVRELESELDGEQRRFQDANKNLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQ KLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEERADQAENSLSKMRSKSRASASVA PGLQSSASAAVIRSPSRARASDF" gap 104246..104255 /estimated_length=10 gene complement(<110107..>116473) /gene="Cre-str-245" /locus_tag="CRE_20746" /db_xref="WormBase:WBGene00060891" mRNA complement(join(<110107..110128,111294..111331, 113878..113899,114000..114024,115349..115655, 115707..115848,115898..116111,116155..>116473)) /gene="Cre-str-245" /locus_tag="CRE_20746" /product="CRE-STR-245 protein" /db_xref="WormBase:WBGene00060891" CDS complement(join(110107..110128,111294..111331, 113878..113899,114000..114024,115349..115655, 115707..115848,115898..116111,116155..116473)) /gene="Cre-str-245" /locus_tag="CRE_20746" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)" /codon_start=1 /product="CRE-STR-245 protein" /protein_id="EFP01010.1" /db_xref="InterPro:IPR003002" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE20746" /db_xref="WormBase:WBGene00060891" /translation="MFQFHSTIERIAVIFALVGNVSLILLILKKSVSKLGNYKYLMVY ISVFELAFAVLHGLTVPVSVEIFLFIYETFSFKVIFTTDCMNFLVTRVDKTWFPKPIL QVLNVLFCDMFGMSMSLFATHFIYRYMVLSRKKFLRKYDGRTICVMILFSILFGIVWG VFAWDTMQPFPEADRMLSEKFATQMNLTLDQIAYVGILFYYKDKLGNEQVHWPSVVGI GIQSFFIGISFFLIFYFGFKCYQQTRRLVSSQSNSSNNLQSQLFYALVFQTLIPICLM HVPASIVYGVAALNKSNDFFGQFLSLFICLYPALDPLPNFFIIKSYRKAVRGAPGAEL FGPDFLGFLASRLLGFSAGFFRLLGRTF" gap 110833..110842 /estimated_length=10 gap 112584..112593 /estimated_length=10 gene <116650..>118624 /gene="Cre-aex-5" /locus_tag="CRE_20689" /db_xref="WormBase:WBGene00060890" mRNA join(<116650..116666,116715..116784,117054..117250, 117295..117451,117495..117698,117802..117900, 117945..118042,118093..>118624) /gene="Cre-aex-5" /locus_tag="CRE_20689" /product="CRE-AEX-5 protein" /db_xref="WormBase:WBGene00060890" CDS join(116650..116666,116715..116784,117054..117250, 117295..117451,117495..117698,117802..117900, 117945..118042,118093..118624) /gene="Cre-aex-5" /locus_tag="CRE_20689" /note="contains similarity to Pfam domains PF00082 (Subtilase family), PF01483 (Proprotein convertase P-domain); contains similarity to Interpro domains IPR000209 (Peptidase S8 and S53, subtilisin, kexin, sedolisin), IPR015500 (Peptidase S8, subtilisin-related), IPR002884 (Proprotein convertase, P)" /codon_start=1 /product="CRE-AEX-5 protein" /protein_id="EFP01050.1" /db_xref="InterPro:IPR000209" /db_xref="InterPro:IPR002884" /db_xref="InterPro:IPR015500" /db_xref="PFAM:PF00082" /db_xref="PFAM:PF01483" /db_xref="WormBase:CRE20689" /db_xref="WormBase:WBGene00060890" /translation="MKRKVRQIKSEVQVLLKVCLSVFENKSPDWNLLPSMRIREAWEA GFNASRVTVAVVDDGVDVAHVDLRSAFSPDVSFDFVKFGSLPIPAVSKDTQHGTQCAG LVAMEGNQCGLGVGHGATLGAIRLLGQDTLNDALEGDALAFQKNLIDIYSVSWGPKDD GLTAEKPAKFTQEAIRNGAIHGRKGLGNIFVWASGNGGMNGDNCALDGYVSNEYTISF GVVDSTGAPASYAEGCSSVLAAVSGGDSMIQTTGLESKCSVISGSSASAAIASGVIAL ALEANPTLSQRDIQHLIVHTANPSAIRDITFFENAAGLKFHPSVGFGLLDAQKLVERA ATWQNVGEQKVCRKTKLLSGDIDVTDCVGVTRTERVILTGSVIHPHRGQVRMHIESPH GTVSELLPLRSKDESSDLLEWDFVSVHFFGESPKGVWKLRVISEEDLKDPESFRVKLT EFKITGT" gene complement(<118849..>122847) /locus_tag="CRE_20747" /db_xref="WormBase:WBGene00060892" mRNA complement(join(<118849..119033,119113..119884, 120300..120752,120965..121168,121463..122097, 122171..122525,122629..>122847)) /locus_tag="CRE_20747" /product="hypothetical protein" /db_xref="WormBase:CRE20747" /db_xref="WormBase:WBGene00060892" CDS complement(join(118849..119033,119113..119884, 120300..120752,120965..121168,121463..122097, 122171..122525,122629..122847)) /locus_tag="CRE_20747" /note="contains similarity to Equid herpesvirus 4 24.; TR:O39266; coded for by the following C. remanei cDNAs: DR779399, DR779763, DY525837" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01063.1" /db_xref="WormBase:CRE20747" /db_xref="WormBase:WBGene00060892" /translation="MPEEYIMSSKASVYVLGGENTAALFDLDGVYVLDGGLSEKSPGF ITCVREVTAVILSAPTLGNLGTTAALLEKDKTLPILTNTKPLKSAKPGSSAEVVKAIQ EANSKLISNTTPTFDPKYPAHILYQSLSKGILSLYILAGDAKDAEAITKALASGNETE VEKAASEHGTIGVMLWRPAEGDKPVVRVLISGTASLARIQQSLEKAAKALPFLNAATV KSKDALASIPPPSIPRALAPSKPAAGAKPAATKSATTRPTTSGPSAAARPASSAPRAL TSRAPAPISGAARPVSAKPTAPGASSRTGAPGKAPAPSKPAARAAPSPKTSAATKASA PAKAPVKPSAPGRGAPEPAAQKKTVGKVQGAAPSKKTETAAPAPAKESPAPAATIPAA AITARVPEPSETAANTTIVLDDSLLDDDHHSGLNPMDIVVIPPTPEPPRDPRDDDFVE AEPKKDEPKEEPKDEPVAAVEPPKEIDDVANLADVEDEIPQPVDSFKKPEPTPSVPEQ PKEAAETPKTDDVEDKVPEPIDAFKKPEPTPEDVHPGAYPKLDDVLADFDPLTPSHPE PSAPDVPSDHVIIATPDPNLPDIAAAIPFIPPTPLGPNDGLIQLEDDSINVAPGFEEP LIPQAPREDGTLADCSEELSKLVEISMDTDKSTEAGAELAKAIGDVTQLSAELQQLGL DEKTDEYVRKLSNQMIEDATLPFTSALASSIVSSNGSTDQEPNGHVSSPPANGVHKEI PKHDLMQSRSSVIENGAPVEYEKTDPALDDILNACAQESDKLDASHPAAPATTHTPET LHMPAAPGTAMALKPVKFTRPYYFDLVTAPRNEKLETTATSDGLQEFISKIRSRNVIL ASKDISGEQLQGVLTGKQMWCESGHQCIVIPTHSSPVLLDFRQKNEEQFHAAHLTFTV PVEKQRTTVSSDIGSTEYELAKISLE" gene complement(<127149..>127829) /locus_tag="CRE_20748" /db_xref="WormBase:WBGene00082932" mRNA complement(join(<127149..127562,127617..>127829)) /locus_tag="CRE_20748" /product="hypothetical protein" /db_xref="WormBase:CRE20748" /db_xref="WormBase:WBGene00082932" CDS complement(join(127149..127562,127617..127829)) /locus_tag="CRE_20748" /note="coded for by the following C. remanei cDNAs: DT934347, DT935369, DR407988, DR782158" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01005.1" /db_xref="WormBase:CRE20748" /db_xref="WormBase:WBGene00082932" /translation="MSDFHVKGDGPLETWQLEGAARFFNNQEHEIAYHKLFQSANARI QRYFITIGVRINHEDTRDWAMSKMIDEATKMNLSYNDNKSMAQVLDMGYKSAKRNYNN RQPLDDEEKVQLKDKAQWETHHSNVTEFQDAMDKLAENSAFEIRILSALLSGHPDDIQ YTKETWTEEYEHEKYVVHHHFFPKFVSHGTRHMTEAEMETLRNATTNY" gene complement(<128326..>130255) /locus_tag="CRE_20749" /db_xref="WormBase:WBGene00060893" mRNA complement(join(<128326..128605,128705..129171, 129279..129371,129415..129996,130172..>130255)) /locus_tag="CRE_20749" /product="hypothetical protein" /db_xref="WormBase:CRE20749" /db_xref="WormBase:WBGene00060893" CDS complement(join(128326..128605,128705..129171, 129279..129371,129415..129996,130172..130255)) /locus_tag="CRE_20749" /note="contains similarity to Pfam domain PF09243 Mitochondrial small ribosomal subunit Rsm22; contains similarity to Interpro domain IPR015324 (Ribosomal protein Rsm22, bacterial-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00941.1" /db_xref="InterPro:IPR015324" /db_xref="PFAM:PF09243" /db_xref="WormBase:CRE20749" /db_xref="WormBase:WBGene00060893" /translation="MLHNRLFFRHIVANFASLSAAAEYRESDKLFRREFNLPQKAIDG LRNAVVTCERPAKQLQNEADQLTSKLEQRRFPESPEKLKKVRDEVKRKLKSGKRGEIS DFDKEAFGGKVQEAQQYEIRNEVDRILKKANFNWKPLEITSKEAAAAYSLARLAPNYA DISRCLEEFNRIPDFQPETILDYGSGSGAGFWAATSRWDNVKEITMVDLSDAIMKFSM DSLRKNHNPADGIDNGRPFVHDNINFRRHLIPSLNTTYDVVIAHRVLCEIGSSETRLQ LIESLWKRTNRFLVLIESSQSGAFGGILEARDFILSQGTLVDYRKLLKTLEEKVMLSP KVVRIVEDYNLSDYEKFVLLNESVPPGEVVPTMLPTGTVMAPCPHDLGCPLGVHSSCT FSSRFQPIRADGKRSEKESDGTEVSKFTFMIIEKSARKVNEHTERILKNRKLGGHVTC DVCTAFRGIQRVTLSKKHGEMYTAIRSRRDGDVLPINLRTMTSSGIFDVDN" gene <135350..>140841 /gene="Cre-eva-1" /locus_tag="CRE_20690" /db_xref="WormBase:WBGene00060894" mRNA join(<135350..135461,138635..138737,138783..139243, 139898..140023,140072..140139,140194..140323, 140373..140675,140723..>140841) /gene="Cre-eva-1" /locus_tag="CRE_20690" /product="CRE-EVA-1 protein" /db_xref="WormBase:WBGene00060894" CDS join(135350..135461,138635..138737,138783..139243, 139898..140023,140072..140139,140194..140323, 140373..140675,140723..140841) /gene="Cre-eva-1" /locus_tag="CRE_20690" /note="contains similarity to Pfam domain PF02140 Galactose binding lectin domain; contains similarity to Interpro domain IPR000922 (D-galactoside/L-rhamnose binding SUEL lectin)" /codon_start=1 /product="CRE-EVA-1 protein" /protein_id="EFP00962.1" /db_xref="InterPro:IPR000922" /db_xref="PFAM:PF02140" /db_xref="WormBase:CRE20690" /db_xref="WormBase:WBGene00060894" /translation="MRSFTLLSCIFLLVFRIDGKLKSGFIGSNNHETSPIEGILKESL RSNRVQACDGERITLSCPRNTQISVQTGFYGRVVPENQLCPPQAGRKIPDALTDPLAM IHHSSTCDVIQAHTVGIELYVVGTKSFNFQRISELCDKRRKCTVVVDSNTFEDDPCPT TSKYLQMAYGCIPMSFDEETFCTPKPTEPSRPEIRLECREGRRLAVYSAQMKTSPQCD PDTEIRHECVSDVLPQVLRQCHAKEGCTLKSEEIKGHCRHGHLHVVYVCVNEEIFSEE AIKGELTSLETYLKEADAIQKQEDERFFKDVNDKTQWERVVDSEPARDSDVHQIANDA SYVTHDEYRMEKQDPPPITERVEPNLVGVGHDLLQVVQFFKENKEKAVMCIVLAVSMA AIVVLSACIITRLCTSTKDNSRSSRSSRSRRSLETSKLVSSNYGGSITPQHMLQDIED EQFLRFSMGSAANSNPHYSHYDF" gene complement(<140968..>142471) /gene="Cre-ddo-3" /locus_tag="CRE_20750" /db_xref="WormBase:WBGene00060895" mRNA complement(join(<140968..141141,141226..141448, 141527..142137,142284..142384,142432..>142471)) /gene="Cre-ddo-3" /locus_tag="CRE_20750" /product="CRE-DDO-3 protein" /db_xref="WormBase:WBGene00060895" CDS complement(join(140968..141141,141226..141448, 141527..142137,142284..142384,142432..142471)) /gene="Cre-ddo-3" /locus_tag="CRE_20750" /note="contains similarity to Pfam domain PF01266 FAD dependent oxidoreductase; contains similarity to Interpro domains IPR006076 (FAD dependent oxidoreductase), IPR006181 (D-amino acid oxidase, conserved site), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DR781027, DR409630, DT937322, DR777184" /codon_start=1 /product="CRE-DDO-3 protein" /protein_id="EFP00969.1" /db_xref="InterPro:IPR006076" /db_xref="InterPro:IPR006181" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF01266" /db_xref="WormBase:CRE20750" /db_xref="WormBase:WBGene00060895" /translation="MLRLLLLFGGVLAVNSLRVAIVGEGVIGLSTATAILDLAAKENV TAPDIQIFHHKPFEKILSRHIAGLFRIDSGSEINKKYGYDTFEKLATLWREYGGLSGV QLVSGHILSDSKPRLDSQRVAYGNLVYNYRDLTEPELFGPTSLFDLPRNTTTHGIHYT AYTSEGLRFCPFLKKELMAKGVRFIQRKIENLEDLGAEFDVVVNAAGLYGGVLAGDDA GNMTPIRGVLIRVDAPWQKHFLYRDFSTITIPVIDSVYMGTVKQEGAYGPPNVTFNDI QDITSRYVKLQPSFKRVHMLSSFVGYRPGRKQVRVEKQVREAYGMKKFTVVHNYGHGG NGFTLGYGSAVHAARLVLDLPLDDYKGIIPDPLPVNTTIGEWVHVLDD" gene complement(<143044..>143811) /gene="Cre-ubc-16" /locus_tag="CRE_20751" /db_xref="WormBase:WBGene00060896" mRNA complement(join(<143044..143364,143506..143611, 143705..>143811)) /gene="Cre-ubc-16" /locus_tag="CRE_20751" /product="CRE-UBC-16 protein" /db_xref="WormBase:WBGene00060896" CDS complement(join(143044..143364,143506..143611, 143705..143811)) /gene="Cre-ubc-16" /locus_tag="CRE_20751" /note="contains similarity to Pfam domain PF00179 Ubiquitin-conjugating enzyme; contains similarity to Interpro domains IPR000608 (Ubiquitin-conjugating enzyme, E2), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like)" /codon_start=1 /product="CRE-UBC-16 protein" /protein_id="EFP00933.1" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR016135" /db_xref="PFAM:PF00179" /db_xref="WormBase:CRE20751" /db_xref="WormBase:WBGene00060896" /translation="MSDAATRRLMKELAQLKNENPEGLLIDNTITSHDLKQWKIGVVG AEGTLYAGEVFTLQFTFGPQYPFNSPEVMFVGDTIPAHPHIYSNGHICLSILSDDWTP ALSVQSVCLSILSMLSSSKEKKHPIDDAIYVRTCNKNPSKTRWWFHGKRRNIQVSFRP MSDRAGFINVFTRIDSI" gene complement(<144201..>145271) /gene="Cre-let-49" /locus_tag="CRE_20752" /db_xref="WormBase:WBGene00060897" mRNA complement(join(<144201..144501,144598..144810, 144912..144989,145055..145136,145181..>145271)) /gene="Cre-let-49" /locus_tag="CRE_20752" /product="CRE-LET-49 protein" /db_xref="WormBase:WBGene00060897" CDS complement(join(144201..144501,144598..144810, 144912..144989,145055..145136,145181..145271)) /gene="Cre-let-49" /locus_tag="CRE_20752" /note="contains similarity to Pfam domain PF05983 MED7 protein; contains similarity to Interpro domain IPR009244 (MED7); coded for by the following C. remanei cDNAs: DR781281, DR408036" /codon_start=1 /product="CRE-LET-49 protein" /protein_id="EFP00994.1" /db_xref="InterPro:IPR009244" /db_xref="PFAM:PF05983" /db_xref="WormBase:CRE20752" /db_xref="WormBase:WBGene00060897" /translation="MLPGFGTQTVSPFPNPPEYATAYTSDRIDNGSAPPPPQALTEFK VFGEEYRLGDDVIAPLKDANVEELYKNKNNWKEEMKKLNRSAICAFFDLVEILIRAPD HPLREEKMIDLHTIFINMHHLINEFRPVQARDSVRILQERQIEELGEICDNFRSYLAD GKEVIEDQFKLVTGKLPPPPQPSELSKVRLQDGVLHELIERIKISEEEEDVEMKEEES EETKRRKVLEDLTREDGPPSVVHLLTRQLHEFELKK" gene <145864..>149256 /locus_tag="CRE_20691" /db_xref="WormBase:WBGene00060898" mRNA join(<145864..146058,146108..146205,146303..146429, 146513..146619,146718..147044,147123..147345, 147450..147635,147738..147980,148061..148816, 148921..>149256) /locus_tag="CRE_20691" /product="hypothetical protein" /db_xref="WormBase:CRE20691" /db_xref="WormBase:WBGene00060898" CDS join(145864..146058,146108..146205,146303..146429, 146513..146619,146718..147044,147123..147345, 147450..147635,147738..147980,148061..148816, 148921..149256) /locus_tag="CRE_20691" /note="contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DR407037" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00968.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="WormBase:CRE20691" /db_xref="WormBase:WBGene00060898" /translation="MEHLGEYPLLLDHIIQSEISAELLLDDKVITCAKFDQKYAEHVD NRLEEEFPEHIIGCKELDEDDKIVTVTSRNTLTIRKCSDLDIESTIQCDYFATSICSL IHGDSVASCHVFFGSVIGDLIDWKPNKDKKPVMRKGHKGMIFSIVTDETRIFTISDDR TVRMWLISDREGGPICTVFGHTARPFAISIDTVHFTIYTGGIEQTLFCWKYDNDSIKL FQKIPLSFGVIRKITKIDNNLLAISSQNGDLLKIRINENPYVLEILKEDVVNFAHLKD RLVILTSKNELFVYDSGLMDRIVFRSKEMKHMASSEESVVAWKDKIMILISEGSVTRL TLSMNIISISVYMNYVTIKTIDGYIQVYDFYDPEHLRCLNRFRLKNAAMIPSVTSVAH RTLIIGTTHGEIYHSDLRNDTDKVLLSLTRQDSYEIFGGKEVTCIHPIPKTTMFMTLG KTGIWSTMRVTPEDTVKVMNSRSFSAASRVAWPSKFIEWKNGQELLIAGFYGTSLVIW NSTTGLPVSEIYCGGGHRIWQLNPSSSDEHSFNFDYIRETEYCRQKIDFTEKVSLIST AHSSTIFAASGSENYLVTVSLDGHLSIGTNKGNPILTMFVGENLLSTDVYENHGEKQS EVFVLTGGGKSKFSVFRFQPDDLKKYNVFWLRSVARPDEGRIVAVKTCRLQNQNYFIA SYSSGVIEIFKISKDDNNLESTSRIEIEDSLGIGAKMDYCEKDGKLFVGTSGSYVLAY ILKENGRLEEENKLKLSDRSGVTSIAISPDGSAHFVGCDSGHVYQCHATETTKIHSHL STVVGIVVDKNDLVHSTSLDCVVLTSYEPSEFHLRKPTIIDMPNGMVRTGESTIIVVG DGIQIMKKF" gene complement(<149883..>156426) /gene="Cre-smp-1" /locus_tag="CRE_20753" /db_xref="WormBase:WBGene00060899" mRNA complement(join(<149883..150056,150120..150287, 150340..151238,151287..151428,151483..151580, 151736..151812,151981..152306,152356..152401, 152745..152847,156324..>156426)) /gene="Cre-smp-1" /locus_tag="CRE_20753" /product="CRE-SMP-1 protein" /db_xref="WormBase:WBGene00060899" CDS complement(join(149883..150056,150120..150287, 150340..151238,151287..151428,151483..151580, 151736..151812,151981..152306,152356..152401, 152745..152847,156324..156426)) /gene="Cre-smp-1" /locus_tag="CRE_20753" /note="contains similarity to Pfam domains PF01437 (Plexin repeat), PF01403 (Sema domain); contains similarity to Interpro domains IPR002165 (Plexin), IPR001627 (Semaphorin/CD100 antigen), IPR003659 (Plexin/semaphorin/integrin), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DR408417" /codon_start=1 /product="CRE-SMP-1 protein" /protein_id="EFP00945.1" /db_xref="InterPro:IPR001627" /db_xref="InterPro:IPR002165" /db_xref="InterPro:IPR003659" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF01403" /db_xref="PFAM:PF01437" /db_xref="WormBase:CRE20753" /db_xref="WormBase:WBGene00060899" /translation="MRQTLLLLLFFLFRNSEAATSGVVNLRPKQNVNSVGIGDRFGGI GTSSDESDHFKLLAADGDSLLVGARNAVYNLSLSTLSVNHKIDWKPPAEHIEECIMKG KSKTDCQNYIRVLARKSAGVSLVCGTHAFSPKCREYTVTDYGIRNTRQFDGQGISPYD PKHNSSALYIPGTNQLYAATVTDFVGNDALIYRKTIDETASTKSANIRTQSYDARVLN APNFVATFVYKEHVYFWFREIASEAIDNNEESQIYARVARVCKNDKGGARPANERWTT YLKARLNCSLPSGSSPFYFNELKAVSDPIDAGNNDHVVYTVFSTPDSDVRMSAVCKFS MKKIREEFDNGTFKHQNNAQSMWMAYNRNEVPKPRPGSCTPDSTKLPENTVSFILHHP LLHRPISAVSAPLLVEGADRADLTQITVLPRVKAVGGHSYDVLFIGTSDGKVLKVVEV DGNATVIQAAIVFQKGVPVVNLLTTKDNVVIVSSDEIASLPVHNCAQQTSCSKCVQLQ DPHCAWDSSIARCVHGGSWTGDQYIQNMVFGQSEQCPEGIIVREVFDDNENGDAQPEA VSRNVYAKEHSTVTVLLVAAVASLISLIIGAFIGIRINRWTASSEPHRSASSTSGSDY DSFGRARLTRHDSLTTATKVDHGFVPQSKQSMDATSLVMSMNATHHPMSMSQHGSGIN TPSRDKNAIVTSINQNTLPRDYKVKKVYL" gene complement(<164178..>165709) /locus_tag="CRE_20754" /db_xref="WormBase:WBGene00060900" mRNA complement(join(<164178..164368,164491..164848, 165143..165225,165271..165508,165605..>165709)) /locus_tag="CRE_20754" /product="hypothetical protein" /db_xref="WormBase:CRE20754" /db_xref="WormBase:WBGene00060900" CDS complement(join(164178..164368,164491..164848, 165143..165225,165271..165508,165605..165709)) /locus_tag="CRE_20754" /note="contains similarity to Pfam domains PF00107 (Zinc-binding dehydrogenase), PF08240 (Alcohol dehydrogenase GroES-like domain); contains similarity to Interpro domains IPR013149 (Alcohol dehydrogenase, zinc-binding), IPR013154 (Alcohol dehydrogenase GroES-like), IPR002085 (Alcohol dehydrogenase superfamily, zinc-containing), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DY525165" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00974.1" /db_xref="InterPro:IPR002085" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013154" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00107" /db_xref="PFAM:PF08240" /db_xref="WormBase:CRE20754" /db_xref="WormBase:WBGene00060900" /translation="MIKSSTIAALVHRFGGPEQIEIAQCGIPCIKNANQILVRNHASG VNPVDTYIRAGQYAKLPTLPYVPGKDGAGVVELVGENVKNVKVGDRVWFGMELGTASQ HTVVNRPFLLPEGVSFSEGASLGTPYLTAYRALFHLAGAKTGDVILVHGASGGVGSAL MQLAAWKKIEAVGTAGSKNGIQFVKRLGAKHVYNHSESGYVSKMKADYPGGFNYIFEM SAHTNLNTDLGLLAPRGKVAVIGNRDETKINARQLMATEGSVFGVALGLSTESELSDF GTNIVEFLKETDFRPLINKEYSLEQIGQAHKDIMENTGAKGNLVIRID" gene <166305..>167474 /gene="Cre-uev-1" /locus_tag="CRE_20692" /db_xref="WormBase:WBGene00060901" mRNA join(<166305..166308,166616..166761,166908..167033, 167331..>167474) /gene="Cre-uev-1" /locus_tag="CRE_20692" /product="CRE-UEV-1 protein" /db_xref="WormBase:WBGene00060901" CDS join(166305..166308,166616..166761,166908..167033, 167331..167474) /gene="Cre-uev-1" /locus_tag="CRE_20692" /note="contains similarity to Pfam domain PF00179 Ubiquitin-conjugating enzyme; contains similarity to Interpro domains IPR000608 (Ubiquitin-conjugating enzyme, E2), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like); coded for by the following C. remanei cDNAs: DT936926" /codon_start=1 /product="CRE-UEV-1 protein" /protein_id="EFP01054.1" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR016135" /db_xref="PFAM:PF00179" /db_xref="WormBase:CRE20692" /db_xref="WormBase:WBGene00060901" /translation="MVDVPRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTGS IIGPPRTPYESRIYNLQIQCGANYPREPPTVRFTTKVHMVGVNQSNGVIEKRNLATLR NWSNSYMIKNVLEDIRKNMMMAKENLKLQQPAEGAMF" gene <167926..>170696 /locus_tag="CRE_20693" /db_xref="WormBase:WBGene00060902" mRNA join(<167926..167950,168007..168936,168992..169413, 169582..169698,170460..>170696) /locus_tag="CRE_20693" /product="hypothetical protein" /db_xref="WormBase:CRE20693" /db_xref="WormBase:WBGene00060902" CDS join(167926..167950,168007..168936,168992..169413, 169582..169698,170460..170696) /locus_tag="CRE_20693" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01002.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE20693" /db_xref="WormBase:WBGene00060902" /translation="MSYEDLKPVRFDYDDHYQPPPVYYNSYSHEPDPYHPPQPQYIQM MTPSENGHNNHHYQQVNSHHVHQHHQTYQHQIHQHQNIAPTHVPHQNQHLHYTVIDNQ DSDSQDSMDSTFQHRPMTQAKLSGRGNGVQKQRFSVEDDSEDLSEEVQNHWMPMTWCE RSSDDPQVFNFVCLWGQCVAVSTGKDEFINHLFSHVPGREDSIQQRRYSAEDCITCKV RGCGAQLASIDDLSRHVSMHVFQADCQQKGSEALIEKEEYSGIESCGFEPCTNLSYDG MVLTCLWNDCGMTFNSLTDLFDHVGNHIDDVCDIDRLEQEFQNGVKKTVFPCKWTGCN HLAESKSNLRRHGRHHSGEKMLACPFCARFFSRRDKLYDHCVRRTILMTDPDIEDPYL CKLCQKRFGTERALCMHVTRHLVGHTCPLCALALDSRAAIHRHLMTKHSRRSRDFKCT TCNKMFFTESELNRHAVYHTDVMYSCKTCPEKFKWKKQLLKHMKEHDENYNPSPYTCH LCDRTYTSGFALGRHLTRQHRLQIPYGFSRFTYKKCADGLMRLQTKKLFRNESGENPD QSLSASHVPY" gene <171445..>172876 /locus_tag="CRE_20694" /db_xref="WormBase:WBGene00060903" mRNA join(<171445..171840,171935..172183,172232..>172876) /locus_tag="CRE_20694" /product="hypothetical protein" /db_xref="WormBase:CRE20694" /db_xref="WormBase:WBGene00060903" CDS join(171445..171840,171935..172183,172232..172876) /locus_tag="CRE_20694" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8QGT5; coded for by the following C. remanei cDNAs: DT933673" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01042.1" /db_xref="WormBase:CRE20694" /db_xref="WormBase:WBGene00060903" /translation="MLSKQIIRSFLTRNRNFHKTIKSKVLSPGFSLEKEWTGRHVALG KLGLGGDYEWISAVQKKFIGGGYASAVDVDAAVCVAEQKDQVDDVIELLYKLRHSVKA AEKLESSEYALVRLLLKYQPETILTLANDPINYGVFLNQHLACIVIDHFIKSSNIQSA ARIVTWMIQQEELENELLNVLGLYVCAKWAELPVDQQTLELGGVEEEEDVNDDDIRTF KFPYLKNDSFDEHFDLTNPNHLIGKSLMWLSRDTSSLNKDLKSSLNALGAVLFEKLAE AESTISTSLPSVKHLVAERLKAEEGEEQSEDVKKILEKIGETQKSEEGQKLSDMVLEH FKTIQAAEEEKLCSEQVKLYSAWNERRQILVKSQAQKVLLRVRQDEIRAELKQLDEQE EQMSFFKNRLQWEKRAAENTQIDEESKERHKKRESAV" gene <173093..>173693 /locus_tag="CRE_20695" /db_xref="WormBase:WBGene00060904" mRNA join(<173093..173153,173202..173273,173317..173422, 173468..>173693) /locus_tag="CRE_20695" /product="hypothetical protein" /db_xref="WormBase:CRE20695" /db_xref="WormBase:WBGene00060904" CDS join(173093..173153,173202..173273,173317..173422, 173468..173693) /locus_tag="CRE_20695" /note="contains similarity to Anopheles gambiae str PEST AGAP008600-PA.; TR:Q7Q8J2" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00985.1" /db_xref="WormBase:CRE20695" /db_xref="WormBase:WBGene00060904" /translation="MPETTTTPNKTREIESRARIISDRISESIRLLDNEPSLALYRLQ EHTVRSLPGIVNRRIQLTQQSATLSGAQFDLENCLSTTTNMQNASSSFENCIEMLRNC MFYKQQLDFDSTRKATSSDSMSTVKGRSKSLHNVATRVHSSEAPTTSSSHDS" gene complement(<173822..>174493) /locus_tag="CRE_20755" /db_xref="WormBase:WBGene00082944" mRNA complement(join(<173822..173885,173937..174387, 174487..>174493)) /locus_tag="CRE_20755" /product="hypothetical protein" /db_xref="WormBase:CRE20755" /db_xref="WormBase:WBGene00082944" CDS complement(join(173822..173885,173937..174387, 174487..174493)) /locus_tag="CRE_20755" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01066.1" /db_xref="WormBase:CRE20755" /db_xref="WormBase:WBGene00082944" /translation="MLEYFVTSLIVYNLFLVLPAALLLFTVPTTCCNKKKKKTSKSAS KNKKNKHHKGKKKHSKTAPTTTPLTTPLNNNPLVPTPITSTPIAPPTPLTQTPKAAPT PTVTDSTEVVDTKPAVVVPVISTKSKENVEKEEEKKSKKSEKEEEIGELLRCRDYTPE NFGELKYLFDLLD" gene <174812..>176022 /locus_tag="CRE_20696" /db_xref="WormBase:WBGene00060905" mRNA join(<174812..175021,175137..175278,175345..175529, 175571..175681,175735..175836,175888..>176022) /locus_tag="CRE_20696" /product="hypothetical protein" /db_xref="WormBase:CRE20696" /db_xref="WormBase:WBGene00060905" CDS join(174812..175021,175137..175278,175345..175529, 175571..175681,175735..175836,175888..176022) /locus_tag="CRE_20696" /note="contains similarity to Pfam domain PF03057 Protein of unknown function; contains similarity to Interpro domain IPR004296 (Protein of unknown function DUF236)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00939.1" /db_xref="InterPro:IPR004296" /db_xref="PFAM:PF03057" /db_xref="WormBase:CRE20696" /db_xref="WormBase:WBGene00060905" /translation="MSSMFFIVFLIIQCGTKKKSKKNKSESSESDDDDDDEDSEAERR RRKRAAEKKKKRRAKKQAAKLAAQKEAQQVPKPPKNMAALAATHDPNYQTLAGLNNDL VFGDQAGANGMAGNQGPKAPPPGSNPGMVGTHDPNYQTLAGLNNDLVFGGGGAGGGPL PPKPPAVGGKAGTNDPNYQTLAGLNNADIFKEKAMDGAPKAPAVGGKAETNDPNYQTL VGLNNNDIFKEKGQFAPKPPVNGGKVAGNDYQNNYKNNCPKQPVMKNVKAGTNDPNYQ TLAGLNQDIFGADKKKKF" gene complement(<176172..>177278) /locus_tag="CRE_20756" /db_xref="WormBase:WBGene00060906" mRNA complement(join(<176172..176363,176409..176539, 176586..176722,176769..176945,176998..>177278)) /locus_tag="CRE_20756" /product="hypothetical protein" /db_xref="WormBase:CRE20756" /db_xref="WormBase:WBGene00060906" CDS complement(join(176172..176363,176409..176539, 176586..176722,176769..176945,176998..177278)) /locus_tag="CRE_20756" /note="contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR013026 (Tetratricopeptide region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00987.1" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="WormBase:CRE20756" /db_xref="WormBase:WBGene00060906" /translation="MFKRAASSGFRFAFKNSTTSKFQRFKQVPKLLAITGGASMGIAF FGKAEEKKPENLEQGTGNSEKPKNFDLIVQNADELYDNYLIDNCYNILKKFESSKCSE LLWRLARVVCEKGKLAKDPNERKELILEAYQIIKKALENEPKEGCFGAHKWYAILLDY VGEIEGNKSRIEKSFLVREHLEKALSYFENDPTTWHILGVWHFSFANMGYATRMVAKA IFATPPSSTYQDALHYFLKAEQISPGFYSTNTYYIGEVYEQLGQKQDAIDAFKKSFKM PVVTSDDAAIHKKAYEKLKKYGVKDSEVV" gene complement(<177788..>181324) /gene="Cre-dog-1" /locus_tag="CRE_20757" /db_xref="WormBase:WBGene00060907" mRNA complement(join(<177788..178080,178159..178559, 178606..179960,180015..180092,180139..180241, 180365..180457,180504..180645,180715..181217, 181266..>181324)) /gene="Cre-dog-1" /locus_tag="CRE_20757" /product="CRE-DOG-1 protein" /db_xref="WormBase:WBGene00060907" CDS complement(join(177788..178080,178159..178559, 178606..179960,180015..180092,180139..180241, 180365..180457,180504..180645,180715..181217, 181266..181324)) /gene="Cre-dog-1" /locus_tag="CRE_20757" /note="contains similarity to Pfam domain PF06733 DEAD_2; contains similarity to Interpro domains IPR014013 (Helicase, superfamily 1 and 2, ATP-binding, DinG/Rad3-type), IPR010614 (DEAD2), IPR002464 (DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site), IPR006554 (Helicase-like, DEXD box c2 type), IPR006555 (Helicase, ATP-dependent, c2 type); coded for by the following C. remanei cDNAs: DY525957" /codon_start=1 /product="CRE-DOG-1 protein" /protein_id="EFP01008.1" /db_xref="InterPro:IPR002464" /db_xref="InterPro:IPR006554" /db_xref="InterPro:IPR006555" /db_xref="InterPro:IPR010614" /db_xref="InterPro:IPR014013" /db_xref="PFAM:PF06733" /db_xref="WormBase:CRE20757" /db_xref="WormBase:WBGene00060907" /translation="MSAEQFFGLFKKQKGRNTPSVRKPFKVKREDGGGDSEDPNVPKT HEIAPEIVKKSRAGKRKRIEIKNDDFNQLMMQSVPVRYPKGLTLYPTQKLMIVRIIKA IQNSENVLGESPTGSGKTMALLSSTCAWLKQYMDQKKESREKCAIHGDGAFGGNMKYE ETEDTIKEEMNETRDVKPMVPVKNENLFEDEWKDDFIAHSIPAAGVKIEEKPDVKPEV KKEPSEKAAQAECTCLPRVRIYYGTRTHKQIAQVVKEFSRLPYANIIKHTILASRDQS CIHPLARKQPDISQFCKEINSANGIGCSFKSAMRPKFEKAQPLRDHLRNNGSVVFDIE QVVETLALSYPQICPYFSTNRVLTQDADLIFCPFSYLVDPLIRNSSDVHIKNSIVILD EAHNIEDTCRDAASFSFTEKELDDSLLSLRLKKVAIDQVNANKTPEDALHQTPDLTIE LNEFRQHLLYLELLILEMLRWVRHVAQDARKPARGGMDGFKTCTLSSGNLFSSLTNAE NGIDLFTPPKTPKYDAISVSYNLILIFQSFNTLLSLILTSLFQVAFSGVTKHNEPEMQ HMDQFKPSATAIVCIEKWLYFQSFFGNQQYQPTYRLNVSIEPINQTGRFNRTFDGDLS MSSSFSSTPSLKTRSSAGPRNMQYKEENPWLQENDDDEWKDPSISQTGHKAISEGCKT TISLWCMSPALSFYDAFSETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPDN IFAAVIPFGPHGNRITCTFRNTSDPSSPFYEEIASIIKYVCMHVPAGILCFLPSYRVL EQLKTCMLRNHSMKHIQTKKVVLFEPRKSSELTAVMDEFDSAIFHPTNFGESINGALM FAVFRGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAKKSYNDQNSKDLGILTGDE WYTTQAYRALNQALGRCLRHKNDWGAMLLIDDRLERQTEKIMTGATSARVSKWIRAQL KNYRDFKQFNQNFRVFIEGRQNVNNVKKEKEDIVDE" gene complement(<181792..>183528) /locus_tag="CRE_20758" /db_xref="WormBase:WBGene00082930" mRNA complement(join(<181792..182064,182153..182339, 182430..182919,182978..183110,183157..183314, 183417..>183528)) /locus_tag="CRE_20758" /product="hypothetical protein" /db_xref="WormBase:CRE20758" /db_xref="WormBase:WBGene00082930" CDS complement(join(181792..182064,182153..182339, 182430..182919,182978..183110,183157..183314, 183417..183528)) /locus_tag="CRE_20758" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1); coded for by the following C. remanei cDNAs: DT933251" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01001.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CRE20758" /db_xref="WormBase:WBGene00082930" /translation="MSDFVPETEENEEEPMNVDLEPKIAQKAGKEPVVVDQSFSRRFI NNKWYGKYGEEGELLEHIKEDWIPVAEDEQEFLSQLWFEQEEQERNAHKHYDWDEEKK EWVPKTNKTEEVNEDFIAEYQANYGVQYDDIYKKMDEELQEKAAKALKEEEDKKEKKR KKKQKLHTEEAKNEGWVDFGDKVHAVYVSNLPLDITDEEFQEFMSKCGVIQPDIRTNK PKCKLYRNEEGDLKGDGRCCYIKKESIELACNILDGSLLKNKEVKVEEAHFELKGDFD PSKKRRKLTAAQKKRYMEQQNKLFEWTPDKPRNYRPKSDCTVIVKNLFTLEMMSKNAA LMLDLKEEMTQSCQKYGTVKKVVVYDNHPDGVVSVTFPTTEESDMAVKYLNGRVVDGR KLTAELWDGKTKYKIQETEEDEERRRKEFEKFIEGGGNPDDRNEEEEEDDEDDDDDEE " gene <184356..>186326 /locus_tag="CRE_20697" /db_xref="WormBase:WBGene00060908" mRNA join(<184356..184592,184669..184904,184951..185630, 185710..185795,185851..186083,186131..>186326) /locus_tag="CRE_20697" /product="hypothetical protein" /db_xref="WormBase:CRE20697" /db_xref="WormBase:WBGene00060908" CDS join(184356..184592,184669..184904,184951..185630, 185710..185795,185851..186083,186131..186326) /locus_tag="CRE_20697" /note="contains similarity to Pfam domain PF00201 UDP-glucoronosyl and UDP-glucosyl transferase; contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01026.1" /db_xref="InterPro:IPR002213" /db_xref="PFAM:PF00201" /db_xref="WormBase:CRE20697" /db_xref="WormBase:WBGene00060908" /translation="MSNSLIVLFIVFLSFIPCTSLKILVYSPAYGPSHTNFMARLADT LTEAGHNVTFFTPIMDESRRNQLGVKLTKDVIKLEQDETMKKRKVTIDNVMSLFWTMD VTSENGHRCLETIHQQAVLTCDNMFRNKELIEKLRSKDYDVGLAEPLMTCGLALFRHL GIDKVVLTNSCVNYDVMIPATGEPEDTSYLPCMFSLKISLKFGKKFPAMNSQVTDKMT FAERLENYNLFYLMYDTFGKMFDDETKMYRSHLGEEFPNWRELVADASLHFINAIPSI DFPRPSLQKTIAIGGISIDVEQIDAIENTEDSEFSEILDRRPKNMLISFGTLARSSDM PEDFKNNLIQVFKSEPNCTFIWKYETDDVSFADGVDNVVFVKWLPQKALLKDKRMTAF LTHGGLGSTTEAAFLAIPTIMFPIFADQSRNSNMLGRHGMSIVLHKRDLGNFQKLRNS FHEVLNNEKYRLNAKKVSEMVRNQPLNPKELVVKYIEFVGKYGPFPHMSPYSLKMPYY QRYNYDIYAFKTGLFLVPILLICIVFKLVISYFPVTIVSKDTKGKME" gene complement(<186489..>186774) /locus_tag="CRE_20759" /db_xref="WormBase:WBGene00060909" mRNA complement(join(<186489..186620,186721..>186774)) /locus_tag="CRE_20759" /product="hypothetical protein" /db_xref="WormBase:CRE20759" /db_xref="WormBase:WBGene00060909" CDS complement(join(186489..186620,186721..186774)) /locus_tag="CRE_20759" /note="contains similarity to Pfam domain PF01679 Uncharacterized protein family UPF0057; contains similarity to Interpro domain IPR000612 (Protein of unknown function UPF0057)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00993.1" /db_xref="InterPro:IPR000612" /db_xref="PFAM:PF01679" /db_xref="PFAM:UPF0057" /db_xref="PFAM:UPF0057)" /db_xref="WormBase:CRE20759" /db_xref="WormBase:WBGene00060909" /translation="METPEDRIVMVILILLFPPLAVWYKEGSCGCSVCLNILLYFCFV FPSYIHAVYVCYLRDRR" gene complement(<188491..>216072) /gene="Cre-lim-9" /locus_tag="CRE_20760" /db_xref="WormBase:WBGene00060910" mRNA complement(join(<188491..188645,188820..189176, 189589..189660,189856..189958,190164..190364, 196826..196924,197084..197200,197383..197619, 199643..199737,200121..200218,212068..212213, 215129..215188,215801..215905,215968..>216072)) /gene="Cre-lim-9" /locus_tag="CRE_20760" /product="CRE-LIM-9 protein" /db_xref="WormBase:WBGene00060910" CDS complement(join(188491..188645,188820..189176, 189589..189660,189856..189958,190164..190364, 196826..196924,197084..197200,197383..197619, 199643..199737,200121..200218,212068..212213, 215129..215188,215801..215905,215968..216072)) /gene="Cre-lim-9" /locus_tag="CRE_20760" /note="contains similarity to Pfam domains PF06297 (PET Domain), PF00412 (LIM domain) (6)contains similarity to Interpro domains IPR010442 (PET), IPR001781 (Zinc finger, LIM-type)" /codon_start=1 /product="CRE-LIM-9 protein" /protein_id="EFP01011.1" /db_xref="InterPro:IPR001781" /db_xref="InterPro:IPR010442" /db_xref="PFAM:PF00412" /db_xref="PFAM:PF06297" /db_xref="WormBase:CRE20760" /db_xref="WormBase:WBGene00060910" /translation="MMLSTVNNPYRGGNNSNNNNSNHRMVIEDVTDDPEYSAYGNENE KPENEEEGAFVEYEKLDKTEDPAAYKVCQSTTAVNRTYNNIRPSYRMPIGGGSGSSSG SISREIRVESMNLTDVEEGARCRNKECRLGWKQHPWRKVCVHCKSDRSDHELPPNQAL NVYNRLGIQPPAGMPQSGVAEVEVPGSVGHGYAWVPPGLSRKKVEEYMSQLPNNVVPR TNSSGEKLREKQLLVQLPRQDLSVAYCRHLTTQTERKVYEEFVNARNEIALDIGYVSS NINKAMECHKCSGILETNEMAVIAPKLGDSTGWHPACFTCQTCEQLLVDLTYCVKDSQ IYCERHYAELHKPRCSACDELIFAGEYTKAMNKDWHSDHFCCWQCDQTLTGQRYIMRD EQPYCIKCYEDVFANQCDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFG SKNDRIFCSNCYDQAFATRCDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKVAIGTK SFIPKNDDVFCGPCYEEKFATRCSKCKKVITAGGVTYKNEPWHRECFCCTNCNSSLAG QRFTSKDEKPYCANCYGDLFAKRCNACTKPITGIGGAKFISFEDRHWHNDCFICAQCT TSLVGKGFITDGHEILCPECAKVCI" gene complement(<222184..>224192) /locus_tag="CRE_20761" /db_xref="WormBase:WBGene00060913" mRNA complement(join(<222184..222468,222538..222652, 224122..>224192)) /locus_tag="CRE_20761" /product="hypothetical protein" /db_xref="WormBase:CRE20761" /db_xref="WormBase:WBGene00060913" CDS complement(join(222184..222468,222538..222652, 224122..224192)) /locus_tag="CRE_20761" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00979.1" /db_xref="WormBase:CRE20761" /db_xref="WormBase:WBGene00060913" /translation="MSDNIGPKELSNAFKYLLAYQLDSIASDGVMPSAHGALHKLLCS CYSKNTEVVDIYGEDNEQENQEQYTKRAITSSPSENNNMKKAILPAPSSPSQFPTSSE LSTTIQKVDELKKRKDEMRKKEKEEKQQSPIIVEVYDDTPHSKVCILLFFWKKI" gene <225406..>227624 /gene="Cre-chk-2" /locus_tag="CRE_20698" /db_xref="WormBase:WBGene00060914" mRNA join(<225406..225446,225497..225633,225678..225808, 225897..226035,226089..226225,226297..226404, 226454..226573,226625..226768,226850..226971, 227031..227128,227211..227290,227387..227557, 227610..>227624) /gene="Cre-chk-2" /locus_tag="CRE_20698" /product="CRE-CHK-2 protein" /db_xref="WormBase:WBGene00060914" CDS join(225406..225446,225497..225633,225678..225808, 225897..226035,226089..226225,226297..226404, 226454..226573,226625..226768,226850..226971, 227031..227128,227211..227290,227387..227557, 227610..227624) /gene="Cre-chk-2" /locus_tag="CRE_20698" /note="contains similarity to Pfam domains PF00069 (Protein kinase domain), PF00498 (FHA domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000253 (Forkhead-associated); coded for by the following C. remanei cDNAs: DR407117" /codon_start=1 /product="CRE-CHK-2 protein" /protein_id="EFP01037.1" /db_xref="InterPro:IPR000253" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="PFAM:PF00498" /db_xref="WormBase:CRE20698" /db_xref="WormBase:WBGene00060914" /translation="MVRGTKRRRNSEEKSKTVITVNRDDTIPVDEDAAVGDSQMTTSK PFARLVGIRRGIATIDLIEDNFVCGRGSEESPVNYNFSSLSHDTGLYRFISKVQFAIN RDSESHRIYLHDHSRNGTLVNQEMIGKGQSIELNNGDLISIGIPALIIFVYETTEDGQ YPEELTKKYHVTSHSLGKGGFGKVLLGYKKSDRSVVAIKCLNTQFSTRCSRAIAKTRD IRNEVDVMKKLSHPNIVGIYDCIAVSKYSYMVIEYVGGGEFFSKIVDSKYNRMGVGES LGKYFAYQLIDAVLYLHSVGICHRDIKPENILCSDKTERCILKLTDFGMAKNGMKMKT RCGTPSYNAPEIVANEGIEYTPKVDIWSLGCVLFITFSGYPPFSEEYTDMSMNDQVMK GRLLFHSQWRHVTIETQQMIKWMLTVEPSKRPSAVELMSTEWMKCGDCRLAKQEIIKI YKPVTTTDIKNNNNITTAAAALANKKKRLQ" gene complement(<228527..>230395) /locus_tag="CRE_20762" /db_xref="WormBase:WBGene00060915" mRNA complement(join(<228527..228805,228900..229172, 229245..229537,229589..229697,229788..229895, 229944..230250,230298..>230395)) /locus_tag="CRE_20762" /product="hypothetical protein" /db_xref="WormBase:CRE20762" /db_xref="WormBase:WBGene00060915" CDS complement(join(228527..228805,228900..229172, 229245..229537,229589..229697,229788..229895, 229944..230250,230298..230395)) /locus_tag="CRE_20762" /note="contains similarity to Homo sapiens Similar to Myelin and lymphocyte protein; HI:HIT000020948" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01040.1" /db_xref="WormBase:CRE20762" /db_xref="WormBase:WBGene00060915" /translation="MDDAICLSDDDGDECILIEETTVVTTRKSQEKTCSTSYSLVDSV NNRPRSNPITSKDWLEEGLDELDKLIQEKRKNNGNSASWSIGNGNIGDIDMMDYGRIP STSSSSGYFTSSGNIGNKPEKRKLTEDEKDHQREMKENAKRAREAEKEKKAIEKDQKK GEMLKKREEKEREKETRKIEREISAAINSKCEQYTYCHIGKTVMDNFPGLEAEIRILY AERKIDNQLKIENNLGTRIEWRRKCIEMKEDEDGRNERFEYMVRVFPCPDDTQFIFQS TQNLFAIVVPASTLKDVINSNSFEDFIIEQRAGFQNGRCTMLIISFGKLDIQKKRLHK MSLEIYETHRVQIVQIETIHELALLTAQYLRSLARREKKKMDDKEPGESSGGSHKLQY LGEKGIVIGSRNEIVSDWWSKMLSTIDRLSDAQRRAILGLIPDPISGIDKYSKMDYSL AIQEIGDLVAENGRKVGPVMAHRVLTMLTDETGNSIVE" gene complement(<230801..>232290) /locus_tag="CRE_20763" /db_xref="WormBase:WBGene00060916" mRNA complement(join(<230801..230992,231102..231779, 231825..232059,232190..>232290)) /locus_tag="CRE_20763" /product="hypothetical protein" /db_xref="WormBase:CRE20763" /db_xref="WormBase:WBGene00060916" CDS complement(join(230801..230992,231102..231779, 231825..232059,232190..232290)) /locus_tag="CRE_20763" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain); contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014014 (RNA helicase, DEAD-box type, Q motif), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal); coded for by the following C. remanei cDNAs: DY527980, DY527064" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00961.1" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00270" /db_xref="PFAM:PF00271" /db_xref="WormBase:CRE20763" /db_xref="WormBase:WBGene00060916" /translation="MAETKKKNDDMATVEFESSEEVSIVPTFDKMGLREDLLRGIYAY GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQTLDTQVRETQALILSP TRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIR RRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTS KFMTDPIRILVKRDELTLEGIKQFFVAVDKEEWKFDTLIDLYDTLTITQAVLFCNTRR KVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQV SLVSVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDE MPMNIADII" gene <233073..>234028 /gene="Cre-vps-20" /locus_tag="CRE_20699" /db_xref="WormBase:WBGene00060917" mRNA join(<233073..233305,233351..233438,233486..233638, 233784..233940,233985..>234028) /gene="Cre-vps-20" /locus_tag="CRE_20699" /product="CRE-VPS-20 protein" /db_xref="WormBase:WBGene00060917" CDS join(233073..233305,233351..233438,233486..233638, 233784..233940,233985..234028) /gene="Cre-vps-20" /locus_tag="CRE_20699" /note="contains similarity to Pfam domain PF03357 Snf7; contains similarity to Interpro domain IPR005024 (Snf7)" /codon_start=1 /product="CRE-VPS-20 protein" /protein_id="EFP01053.1" /db_xref="InterPro:IPR005024" /db_xref="PFAM:PF03357" /db_xref="WormBase:CRE20699" /db_xref="WormBase:WBGene00060917" /translation="MGGIFSKKERAPKSAPVSDQDNAILVSCVTVNVTINCFYFQALK TQRDKMKQMVKRKENCLEKERQLAKQLLKDGKKDRALLILKKKRYQENMIDQTLKHLS KIEQMVNDLEFAEVQQRVTEGLRQGNEALKKMNQLFDIDEIDRIMEETKEAADYQEEI SNMLTGQLSTSDVSDVEKELEELLAAQVPQVQLPDVPSHELPEAEREAQREKDKPRKE RVALEA" gene complement(<239132..>239695) /locus_tag="CRE_20764" /db_xref="WormBase:WBGene00082937" mRNA complement(join(<239132..239443,239492..>239695)) /locus_tag="CRE_20764" /product="hypothetical protein" /db_xref="WormBase:CRE20764" /db_xref="WormBase:WBGene00082937" CDS complement(join(239132..239443,239492..239695)) /locus_tag="CRE_20764" /note="contains similarity to Pfam domain PF00412 LIM domain; contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01047.1" /db_xref="InterPro:IPR001781" /db_xref="PFAM:PF00412" /db_xref="WormBase:CRE20764" /db_xref="WormBase:WBGene00082937" /translation="MNSKRLQKVALPYNIHCKSCTTTLTRQDAQTVFDFYFQSIKNKC FQGKIIKIQDEMFHITCLKCSVCQRTLGVTPCYPMHAFSSAFRCSDCHREATSPKCHG CKRPTFEKCVSAFDAYWHESCFKCKGCKKPFKSRLSFGLLYTESSCFQDKNTWFMMDV LMMRTATIASS" gene <239752..>241347 /locus_tag="CRE_20700" /db_xref="WormBase:WBGene00060918" mRNA join(<239752..240101,240177..240469,240646..240801, 240845..241210,241280..>241347) /locus_tag="CRE_20700" /product="hypothetical protein" /db_xref="WormBase:CRE20700" /db_xref="WormBase:WBGene00060918" CDS join(239752..240101,240177..240469,240646..240801, 240845..241210,241280..241347) /locus_tag="CRE_20700" /note="contains similarity to Pfam domain PF00112 Papain family cysteine protease; contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR000668 (Peptidase C1A, papain C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01007.1" /db_xref="InterPro:IPR000668" /db_xref="InterPro:IPR013128" /db_xref="PFAM:PF00112" /db_xref="WormBase:CRE20700" /db_xref="WormBase:WBGene00060918" /translation="MKEKAGKITQNTRFHGINYILLNLIITVIAVVYGSYYLYRRYVT DVNDKRENDEYLRKLVRQVNDSPETTWKAKFNKFGVKNRSYGFKYTRNQTAVEEYMEH IRKFFESDAMKRHLEELENYKSSDLPKHFDARQKWPNCPSISNVPNQGGCGSCFAVAA AGVASDRACIHSNGTFKALLSEEDIIGCCSVCGNCYGGDPLKALTYWVNQGLVTGGRD GCRPYSFDLSCGVPCSPATFFEAEEKRTCMRRCQNIYYQQKYEEDKHFATFAYSMYPR SMTVSPDGKERVKVPTIIGHFNDKNTEKLNVTEYRNVIKKEILLYGPTTMAFPVPEEF LHYSSGVFRPFPLDGFDDRIVYWHVVRLIGWGESGDGQHYWLAINSFGNHWGDNGLFK INTDDMEKYGLEYETAVV" gene complement(<242230..>246133) /gene="Cre-pyk-1" /locus_tag="CRE_20765" /db_xref="WormBase:WBGene00060919" mRNA complement(join(<242230..242273,242358..242856, 243167..243286,243572..244246,245372..245579, 245777..245943,246041..>246133)) /gene="Cre-pyk-1" /locus_tag="CRE_20765" /product="CRE-PYK-1 protein" /db_xref="WormBase:WBGene00060919" CDS complement(join(242230..242273,242358..242856, 243167..243286,243572..244246,245372..245579, 245777..245943,246041..246133)) /gene="Cre-pyk-1" /locus_tag="CRE_20765" /note="contains similarity to Pfam domains PF02887 (Pyruvate kinase, alpha/beta domain), PF00224 (Pyruvate kinase, barrel domain); contains similarity to Interpro domains IPR015806 (Pyruvate kinase, beta-barrel), IPR015794 (Pyruvate kinase, alpha/beta), IPR015813 (Pyruvate/Phosphoenolpyruvate kinase, catalytic core), IPR001697 (Pyruvate kinase), IPR015793 (Pyruvate kinase, barrel); coded for by the following C. remanei cDNAs: DT934527, DR779765" /codon_start=1 /product="CRE-PYK-1 protein" /protein_id="EFP00998.1" /db_xref="InterPro:IPR001697" /db_xref="InterPro:IPR015793" /db_xref="InterPro:IPR015794" /db_xref="InterPro:IPR015806" /db_xref="InterPro:IPR015813" /db_xref="PFAM:PF00224" /db_xref="PFAM:PF02887" /db_xref="WormBase:CRE20765" /db_xref="WormBase:WBGene00060919" /translation="MYRFWSFISGDNRNPSMRSIENAKHIAHVEQVPLTPILSKLAGE PVAQDLNNNDVKPVDGGLKEDGTRPKTHVCSVPGFRQNPYKTRQEQKLAAIPATTHME HLCRLDIREAPHLVRQTGIICTIGPACASVDMLQKMILNGMNIARLNFSHGSHEYHAG TIANVREAADSFSDKRVIGIALDTKGPEIRTGLLAGGASAEIELKKGASIRLTTDQHF SESGTAINLFVDYKNISKVLEVGSRVYIDDGLISLIVEECQEDAVVCQVENGGMLGSR KGVNLPGTIVDLPAVSEKDIKDLQFGVEQGVDIIFASFIRNAEGIRTIRKVLGEKGKK IKIIAKIENQEGVDNADEIITESDGVMVARGDLGIEIPAEKVFLAQKMLISKCNRAGK PVICATQMLESMVHKPRPTRAEGSDVANAVLDGADCVMLSGETAKGDYPIDALKIMHY ICKEAEAAVYHRRIFDELLQSTPKPTDMSHTIAIAATSAAASCHASAILLITTTGRSA IQCSRYKPAVPILTISRDVAVCRQLHLYRGVFPVHYQSERAADWPTDVDNRINHAIAI GKDRGFIHRGDFLVVVTGWRQGAGATNTLRIITAE" gene 243478..243548 /locus_tag="CRE_32220" /db_xref="WormBase:WBGene00186628" tRNA 243478..243548 /locus_tag="CRE_32220" /product="tRNA-Gly" /db_xref="WormBase:CRE32220" /db_xref="WormBase:WBGene00186628" gap 244747..244756 /estimated_length=10 gene complement(<251121..>252604) /locus_tag="CRE_20766" /db_xref="WormBase:WBGene00082929" mRNA complement(join(<251121..251246,251369..>252604)) /locus_tag="CRE_20766" /product="hypothetical protein" /db_xref="WormBase:CRE20766" /db_xref="WormBase:WBGene00082929" CDS complement(join(251121..251246,251369..252604)) /locus_tag="CRE_20766" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00983.1" /db_xref="WormBase:CRE20766" /db_xref="WormBase:WBGene00082929" /translation="MRALHSPAVAPIEMTNGNFRRLEVCQNCGNGNSTEEILTETAIE SALISLCPEQNLYSSNQHLSRSQGSSIHEKDWDLHPDAVVICTACDSLNSSNVRYYDN CDDVIMRNENVEVGSHDTVMGNQEEYEFIDVGERSGVIIEEIEDEEDSQVNRIVHNNE WDDVPVKGMLMESNSESFEMVVVQRSQEVISAERVEAVETLQDTSIPCESVVISEVSG IETLAITEVPIVCQQFPVFPQNQAANIQEPAQAMNSLSPPSTENPRSIWSLRKLDSET VPKVLTPEDYRKEQQDARRESYVTPLEDLYKKYNHQPILQNGIIRVIHTPPPPRRFST FGHLRRTSSCGTIETYGDALKRRPFWYIEENSSMTTVDEVEVGAPNVIEIEETVSTNR SGCFPMLWNFFTCKWADKGVELAEANDTVTEVKKAVSSASNRGRLARRMTIEEEHAGD YFK" gene complement(<256439..>259566) /gene="Cre-eft-2" /locus_tag="CRE_20767" /db_xref="WormBase:WBGene00060920" mRNA complement(join(<256439..256743,256791..258294, 258341..258517,258561..258915,258964..259178, 259564..>259566)) /gene="Cre-eft-2" /locus_tag="CRE_20767" /product="CRE-EFT-2 protein" /db_xref="WormBase:WBGene00060920" CDS complement(join(256439..256743,256791..258294, 258341..258517,258561..258915,258964..259178, 259564..259566)) /gene="Cre-eft-2" /locus_tag="CRE_20767" /note="contains similarity to Pfam domains PF03764 (Elongation factor G, domain IV), PF03144 (Elongation factor Tu domain 2), PF00009 (Elongation factor Tu GTP binding domain), PF00679 (Elongation factor G C-terminus); contains similarity to Interpro domains IPR000795 (Protein synthesis factor, GTP-binding), IPR005517 (Translation elongation factor EFG/EF2, domain IV), IPR004161 (Translation elongation factor EFTu/EF1A, domain 2), IPR000640 (Translation elongation factor EFG/EF2, C-terminal); coded for by the following C. remanei cDNAs: DY529405, DR778949, DR777370, DR780741, DT934135, DR779604, DR407230, DR409608, DR407384, DY525984, DR780040, DR409700, DR777253, DR778522, DR780044, DR777405, DT937449, DT937290, DR776649, DR409565, DR407831, DT936907, DY529052, DR408142, DT935823, DR781194, DR775986, DR409397, DR777937, DR408835, DT937271, DR779245, DY527841, DT934563, DR779172, DR407622, DR779163, DR782240, DT937013, DR777533, DR779543, DR408071, DY525010, DR775939, DY527508, DR408496, DT935930, DT937210, DR779098, DR407203, DR776810, DR777747, DR780774, DR777553, DY529073, DY524913, DT935549, DR408897, DY527917, DR777039, DR781512, DR406949, DT933236" /codon_start=1 /product="CRE-EFT-2 protein" /protein_id="EFP00955.1" /db_xref="InterPro:IPR000640" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR005517" /db_xref="PFAM:PF00009" /db_xref="PFAM:PF00679" /db_xref="PFAM:PF03144" /db_xref="PFAM:PF03764" /db_xref="WormBase:CRE20767" /db_xref="WormBase:WBGene00060920" /translation="MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG IIAGAKAGETRFTDTRKDEQERCITIKSTAISLFFELEKKDLDFVKGEQQFEMVEVDG KKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIA ERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDDDGPMGPIMVDP SIGNVGFGSGLHGWAFTLKQFSEMYADKFGVQVDKLMKNLWGDRFFDLKTKKWSNSQT DDSKRGFNQFVLDPIFMVFDAIMNLKKDKTAALVEKLGIKLANDEKDLEGKPLMKAFM RRWLPAGDTMLQMITFHLPSPVTAQRYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYI SKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYIPGKKEDLYEKTIQRTILMMGR YIEPIEDIPSGNIAGLVGVDQYLVKGGTITTFKDAHNMRVMKFSVSPVVRVAVEAKNP ADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKK SDPVVSYRETVQAESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKA RAKILAEKYEYDVTEARKIWCFGPDGTGPNLLFDVTKGVQYLNEIKDSVVAGFQWATR EGVLSDENMRGVRFNIHDVTLHADAIHRGGGQVIPTARRVFYASVLTAEPRILEPVYL VEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNT GGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGIPALDNYLDKM" gene <259937..>262790 /locus_tag="CRE_20701" /db_xref="WormBase:WBGene00060921" mRNA join(<259937..260023,260085..260388,260520..260582, 260747..261038,261148..261336,261404..262084, 262129..262348,262371..>262790) /locus_tag="CRE_20701" /product="hypothetical protein" /db_xref="WormBase:CRE20701" /db_xref="WormBase:WBGene00060921" CDS join(259937..260023,260085..260388,260520..260582, 260747..261038,261148..261336,261404..262084, 262129..262348,262371..262790) /locus_tag="CRE_20701" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PJV3" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00960.1" /db_xref="WormBase:CRE20701" /db_xref="WormBase:WBGene00060921" /translation="MDSTSQLSSTEETDSPSSLLAEPPTSDSQDQSMTNENEETTKTI EEERKLRRLERRKALALARSPQAPKLGTVHQSGNNTIDLTNEDDDPSNLWFKKTFNAE KIPKKAKSPEDAKLFAVPRTISKNAPKSLIVRENLQKKLQASMSAKRRKAQEERRKMY EEDNEHLKPGSDEEEEEVVFKKKKTKKPENEEYDSDEDDEDYKPGNSDSEEGKNDEEM SVNLLNDSFTYDVFNNVKRSGPGSVVSNFDTRSQDDPSEKSTIIPTMTQILGGVVSSS ADNPDDILNFCSGKFEGEGFPDTLQMLLDEGKSENRSEPVASKPVLKPSENSDSESED DSGPMKRLNKSAKANRILDSDDDEEVENSPDAESVILKSQDVFASSSVETEDVPDTIE VQEKEEIHLTRIVVSGDEDSEEEDGDADDEEEVEDGEEDQDDVGEEEEEVEDVEVPEP NFDDEDDELAVIKRIEHQEYKKQIKKRTLFDDEASLSGDDVGSDLEDEEGVENAYEAE EGDADDVPDNDTIRRQNFKMLLKQENDKETRALAKLQDRLLADGDLGGVETNRQFRFK LREEVEIQMAGVDGDGTEDQQEDDDEEEDEERKKEKAEMIKYRIEHLFKFIFQAEELR LLEQSRDDDDDGMFARAGKIMMKTEKTVIEETEEPSTVKYKPLIKPSLLTKTTLAVSF QEVLNGAGGAGPKQMYVQKFEKNSEVMSPATSSRLSSGIGAVKRVLKSPEQQQNSSAK RVRSSKLSSLE" gene <263175..>263561 /locus_tag="CRE_20702" /db_xref="WormBase:WBGene00060922" mRNA <263175..>263561 /locus_tag="CRE_20702" /product="hypothetical protein" /db_xref="WormBase:CRE20702" /db_xref="WormBase:WBGene00060922" CDS 263175..263561 /locus_tag="CRE_20702" /note="contains similarity to Pfam domain PF08561 Mitochondrial ribosomal protein L37; contains similarity to Interpro domain IPR013870 (Ribosomal protein L37, mitochondrial)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00982.1" /db_xref="InterPro:IPR013870" /db_xref="PFAM:PF08561" /db_xref="WormBase:CRE20702" /db_xref="WormBase:WBGene00060922" /translation="MLRAALRSGISLTARRSYPPKAAAGAGVKVDKSFVEEDAVKLAT HVCINAYTQGEEPGPKILPDSDYPEWLFKLDLRAPRELEDLDPEKDGWAYWRALRKRQ IEQNQRIQKLKTKFLHLQDSPSMKKK" gene complement(<263995..>268549) /gene="Cre-aspm-1" /locus_tag="CRE_20768" /db_xref="WormBase:WBGene00060923" mRNA complement(join(<263995..264362,264412..264485, 264556..265052,265157..266578,266626..267598, 267655..267853,267917..268441,268489..>268549)) /gene="Cre-aspm-1" /locus_tag="CRE_20768" /product="CRE-ASPM-1 protein" /db_xref="WormBase:WBGene00060923" CDS complement(join(263995..264362,264412..264485, 264556..265052,265157..266578,266626..267598, 267655..267853,267917..268441,268489..268549)) /gene="Cre-aspm-1" /locus_tag="CRE_20768" /note="contains similarity to Pfam domains PF00612 (IQ calmodulin-binding motif) (2), PF00307 (Calponin homology (CH) domain); contains similarity to Interpro domains IPR016146 (Calponin-homology), IPR001715 (Calponin-like actin-binding), IPR000048 (IQ calmodulin-binding region)" /codon_start=1 /product="CRE-ASPM-1 protein" /protein_id="EFP01025.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR016146" /db_xref="PFAM:PF00307" /db_xref="PFAM:PF00612" /db_xref="WormBase:CRE20768" /db_xref="WormBase:WBGene00060923" /translation="MDSTLERNKAMKLRQMAERHEQLARAKAEKEMKKKKIDLGATEK AFLQTSPSAISMKTPLQTQQRSFTITAESSSSPILSFDEKADKQMIALATWTNTMIGM DNSEELDLGATTAEACRRIQKMLSKKADSSDIETPQQSARRRYHRIFEKNDSENIRKQ CKKLLDDSGMENSIRDMLSKNCIAIREEHSVYNDLALQTTLLRTFLSFHPAWLKCALE AIFNAKIDAQPKYMIRALSQFLIERVFSNPAMLKNKKFAQGSGKPIITKAGREALHHH FLEVSMKLMFLIEAAYTHNVIPNLTRIFTKSSQFKSLDDMFSELTKELLTGSSLTFRK AFGKIGFIPSYKQSFIDNYDYQAKGKFEDFSDGLILAKLTETVGEMPHGKLLLKLRDP AGDRIRKVNNVKVVLQEMSALGISTEDVTANAIVGGKKEAILAILWAIVGVRVAKERK IRVTRSTDNAEGMTTPKKRRSAVHDDMSCEVLSACKAFGRDLDIEVLDLDTLTDGLLL DKIWTVYAPNGMSIQVYPGETLWEKIVSMAELELGIPRGLDQNVPLFVKMFLERTQMV RMYEKAAKIQKMWRCYIERKNTPKLYFIVKSLLNTELRHRSMSPASSIDNGTFTIPKT PGSSRILTEKLSSSQIPTTPRFSMNSTLNDATFTVSRDSIDTLSNTFKQPKTPLRGTF TRNTITAMHLNEVIEESEEDMENDETVVPSTLKKRVRVEGIQKVSIFEAEDSENHLTV QKSKTLVVSSEEVHIIKTINMNSENPVKIENIDNADQMLKDALEANLDDDESVLADNS TNCIPSVSELSPFFVNIPEDVSKSVSDGVEFASDSAERSSDYEKTQRSVSATEDCSQF LEKQEFLDEVQHPEADLTLDSSAAAIVTEGAPEASKEDVETSEIAKDVEETPEITPEE LDTSQVVQESLPVTENITENVEAEEVVKNLEETPESDLQNVTPTHESSILAPESIRTP IPTPRSTLTMEHTQTVSSKSNSFIEYEMTEEQKKNEEEFRQYEENQKQYVLRNQLNLE INDERDSVNTPELKRILRETKELKKKQEKIKNKLGAIERRAMEAKENAFIDSSFMNTA RLSSISGIEEESERSDAGHDDALIQDETDEVSRKMDSLEKSIDEIRARKSPESFELLA EIEDRRAQNGAAEALEKERTLQETAATTIQKMVRGFLARRRFCLEIENWREKMIRYNQ ILAEENEQFERDEAKDSSVENKLRNCTVYGLVNDNLHIVHLAATIIDRITDLVPSLLG KFVVDLNGVKIIYEILAVADQGLAYTSILHPLLRILKKSFVKVPEEVSNAKIRPILSK LSPRLVLLMCKHCMNTEFFDPIIITLISIARRFQTKKESALDPAYAIRQTMK" gene <268921..>269990 /gene="Cre-gip-2" /locus_tag="CRE_20703" /db_xref="WormBase:WBGene00060924" mRNA join(<268921..269016,269074..269310,269357..269475, 269532..269732,269774..>269990) /gene="Cre-gip-2" /locus_tag="CRE_20703" /product="CRE-GIP-2 protein" /db_xref="WormBase:WBGene00060924" CDS join(268921..269016,269074..269310,269357..269475, 269532..269732,269774..269990) /gene="Cre-gip-2" /locus_tag="CRE_20703" /note="contains similarity to Pfam domain PF03099 Biotin/lipoate A/B protein ligase family; contains similarity to Interpro domain IPR004143 (Biotin/lipoate A/B protein ligase); coded for by the following C. remanei cDNAs: DT933394" /codon_start=1 /product="CRE-GIP-2 protein" /protein_id="EFP01033.1" /db_xref="InterPro:IPR004143" /db_xref="PFAM:PF03099" /db_xref="WormBase:CRE20703" /db_xref="WormBase:WBGene00060924" /translation="MCTISRGKLAKVLKSTSNCIFENLAFEEHIFRSHNVEKNGEVLL IWSNRPAVVIGRHQNPWVEVNIPFAHERNIEIVRRHSGGGTVYHDLGNLNISLLTTHA QHCRPKNLKFISDALNNRFSVNIVPNKRDDMELQPGTRKCSGTAARIARGQAYHHLTL LIDADLSILSKSLKSPWRDQIESNATRSVRASAVGFLKQDDQKANVDESKAAILEAYR QLFDECQIETVNVSEEVRKSEEISKIVEELKAWKWIYGKSPKFKFFGENGSEIEVKDG LIIGTDQQFSTDL" gene <270290..>272722 /locus_tag="CRE_20704" /db_xref="WormBase:WBGene00060925" mRNA join(<270290..270341,270454..270596,270668..270943, 270991..271257,271355..271822,271881..272206, 272282..272504,272561..>272722) /locus_tag="CRE_20704" /product="hypothetical protein" /db_xref="WormBase:CRE20704" /db_xref="WormBase:WBGene00060925" CDS join(270290..270341,270454..270596,270668..270943, 270991..271257,271355..271822,271881..272206, 272282..272504,272561..272722) /locus_tag="CRE_20704" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00940.1" /db_xref="WormBase:CRE20704" /db_xref="WormBase:WBGene00060925" /translation="MRVAQQIEPWRETRRQLLNKWHGVRVCDEPSPWYMSIPTPFSQL HNVLPEEQEEMVFTELKLFLVGHQTENIRIDQFDSHLLPVTIAVNISFDPFIRSQLER FYDILITISTIKICCYSITHDAVTFSPIGSAVAGTIEKKINGFVTNICTKLSALQEST QQMNNLYREMHKIHESLTFYCGIVRSIYLEQLIGGQVLTLIDSKRRDVFSGNIQDLDD VFQAGWAVFARSIGRLVCKFEADYLDYEFVIWSTKQMNENLYKKLASTQTKHTKSPRY VIIDSLCPKFFIKYLDILVRCAEFGDASNAENSRKVIGQVKGKESVESVMEDVRNVDW SNLDVNTTVRMLGQFSRKESACLLREITSATNVDQAIRDIHELLIKGSCAHDVMLYGL KADILSKPVEEVGPIRMKKLTNDVLGAAAEKHHPFWKYFSFIIDRQNVFEMLGQRTRL GSHNIEPRETVTPALFECISVKMDCPIDIEPIISSSAVFTLIPIFRIWLQLHVASYTV AEYRDSVRGQMPSRQLGDVAKQKHLMYALDSEISRIKQKWIGYVNVAITLYYERVQKA VSLDEYTECQDILAREVTKMMGITELSQLKIIKDTLNIIWNYNNPDSNLDSLIAEFET VQSIVQMDNNIVMA" gene complement(<273265..>273912) /locus_tag="CRE_20769" /db_xref="WormBase:WBGene00082935" mRNA complement(<273265..>273912) /locus_tag="CRE_20769" /product="hypothetical protein" /db_xref="WormBase:CRE20769" /db_xref="WormBase:WBGene00082935" CDS complement(273265..273912) /locus_tag="CRE_20769" /note="contains similarity to Pfam domain PF00628 PHD-finger; contains similarity to Interpro domains IPR001965 (Zinc finger, PHD-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01029.1" /db_xref="InterPro:IPR001965" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00628" /db_xref="WormBase:CRE20769" /db_xref="WormBase:WBGene00082935" /translation="MSATTTNVPTIEKKILKDVKIEVEDETEHQCVMIHQMEVNRDDE EEMAFLRALLSSDIKKEAVKDEEVEFIDTFSIQLLHLRLERIREFEARELQNLQEYEE EMRVEEKKRRREASRCESEEKDIRPTVEKWIRKESKRSSKKKATKRGRPSSTSSKGAP SKKQKKEEYTCPTCQKPSKRGTCLCSGCGEWFHLACVGIRVSQYYKGFKCSSCLA" gene complement(<275154..>276283) /gene="Cre-aph-1" /locus_tag="CRE_20770" /db_xref="WormBase:WBGene00060926" mRNA complement(join(<275154..275438,275510..275897, 275964..276122,276171..>276283)) /gene="Cre-aph-1" /locus_tag="CRE_20770" /product="CRE-APH-1 protein" /db_xref="WormBase:WBGene00060926" CDS complement(join(275154..275438,275510..275897, 275964..276122,276171..276283)) /gene="Cre-aph-1" /locus_tag="CRE_20770" /note="contains similarity to Pfam domain PF06105 Aph-1 protein; contains similarity to Interpro domain IPR009294 (Aph-1); coded for by the following C. remanei cDNAs: DR777153" /codon_start=1 /product="CRE-APH-1 protein" /protein_id="EFP00963.1" /db_xref="InterPro:IPR009294" /db_xref="PFAM:PF06105" /db_xref="WormBase:CRE20770" /db_xref="WormBase:WBGene00060926" /translation="MGYLLTITCYIASFSPSIALFYSFIAHDPVRIILFFLGAFFWLV SLLISSLAWFGLSSFLPNTFLISLTFCIIVQEFARVAYFALLKKAQKGLNKITRQGQI SVAPGVSDLHNARHMLALVCGLGMGVISALFYTMNAFAVFSGPGTIGLPLALETGEID PNRAGKYLPLCYTLSAILLSLFHVTWTIMVWDTCHKIDRIPSAFVPAAAALISHLLVA FLSSLNSRGFYIVVFPVQFLILLICIAYCNVIMGGTISSFINGIGQSITDGITFKGIR TLIEERKMRTQRQSVPDEPMTERGGTATEGEETNTVDA" gene complement(<277131..>281429) /gene="Cre-tat-5" /locus_tag="CRE_20771" /db_xref="WormBase:WBGene00060927" mRNA complement(join(<277131..277319,277372..277520, 277567..277823,277871..278057,278115..278502, 278616..279098,279175..279289,279358..279694, 279791..280037,280084..280593,280640..280790, 281212..>281429)) /gene="Cre-tat-5" /locus_tag="CRE_20771" /product="CRE-TAT-5 protein" /db_xref="WormBase:WBGene00060927" CDS complement(join(277131..277319,277372..277520, 277567..277823,277871..278057,278115..278502, 278616..279098,279175..279289,279358..279694, 279791..280037,280084..280593,280640..280790, 281212..281429)) /gene="Cre-tat-5" /locus_tag="CRE_20771" /note="contains similarity to Pfam domain PF08282 haloacid dehalogenase-like hydrolase; contains similarity to Interpro domains IPR006539 (Phospholipid-translocating P-type ATPase, flippase), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR013200 (HAD superfamily hydrolase-like, type 3); coded for by the following C. remanei cDNAs: DT937136, DT936851" /codon_start=1 /product="CRE-TAT-5 protein" /protein_id="EFP01045.1" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR006539" /db_xref="InterPro:IPR013200" /db_xref="PFAM:PF08282" /db_xref="WormBase:CRE20771" /db_xref="WormBase:WBGene00060927" /translation="MGKKKKNDDGCSSSSSQKQSVNQSTSTSKDDYSVSFVKSEEDDV ATTIKDKTASLKSNATHFSAASAAKGGMLCCRSLFSRRRILHSRTVRVGYGPVGHDAN VTFSPNTVCNQKYNIFSFVPIVLFQQFKFFLNLYFLLMACSQFIPAIQIGAPITYWGP LGFVLTITLIREAFDDFVRYLRDRDLNSEKYEKLTRDGTRVEIRSADIEVGDVIIMHK DRRVPADVVLLRTTDKSGACFIRTDQLDGETDWKLRIPIPYTQHLPNEADIMELNCEV YAEKPQKDIHAFVGTMKITVDDSVQDGSLNVENVLWANTVVASGTAVGIVVYTGRETR SVMNTTLPESKVGLLDLEVNNLTKLLFIFVLMLSTVMVIMKGLDNLWYRYLMRFILLF SYIIPISLRVNLDMAKLFYSWQIGRDKHIPETVIRSSTIPEELGRISFLLSDKTGTLT KNEMHFKKIHLGTVAFSSDAFEEVGQHVKSAYAGRLAKHSFSAKLQNAVEAIALCHNV TPIFENGETSYQAASPDEVALVKWTETVGVRLANRDLHAMSLSVQLPNGQTLMKQFQI LHVFPFTSETKRMGIIVKDETTDEVTLLMKGADTVMSGMVQYNDWLDEECSNMAREGL RTLVVARKPLSTAELEAFDRAYHAAKMSISDRSQNMANVVNRMLERDLQLLCLTGVED RLQDQVTTSLELLRNAGIKIWMLTGDKLETAICIAKSSGLFSRSDNIHVFGNVHNRTD AHNELNNLRRKTDVALVMPGSALNVCLQYYEAEVAELVCACTAVVCCRCSPEQKAQIV QLLRKYRAPLRVAAIGDGGNDVSMIQAAHAGIGIDANEGKQASLAADFSITQFSHVCR LLLVHGRFCYKRSCALSQFVMHRGLIISTMQAIFSCVFYFASVSLYQGVLMVAYSTCY TMLPVFSLVVDRDVTATNALTYPELYKELGKGRSLSYKTFCIWVLISLYQGAVIMYGA LLVFDADFIHVVSISFSALIVTELIMVAMTVHTWHWAMLLAQALSLGLYMISLILFDQ YFDRQFVLSWVFISKTTAITAVSCLPLYIVKALRRKFSPPSYAKVN" gene complement(<286474..>286761) /locus_tag="CRE_20772" /db_xref="WormBase:WBGene00082934" mRNA complement(join(<286474..286590,286684..>286761)) /locus_tag="CRE_20772" /product="hypothetical protein" /db_xref="WormBase:CRE20772" /db_xref="WormBase:WBGene00082934" CDS complement(join(286474..286590,286684..286761)) /locus_tag="CRE_20772" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01018.1" /db_xref="WormBase:CRE20772" /db_xref="WormBase:WBGene00082934" /translation="MRYSRLATSHEEADEYSRLLPMPDSEIGIEGSDDVYLLPSVSST SSSTFSMTRYALNKIKKNKY" gene complement(<287292..>290086) /locus_tag="CRE_20773" /db_xref="WormBase:WBGene00060929" mRNA complement(join(<287292..287403,287450..287640, 287699..287781,287855..287963,288239..288610, 288678..289000,289078..289159,290003..>290086)) /locus_tag="CRE_20773" /product="hypothetical protein" /db_xref="WormBase:CRE20773" /db_xref="WormBase:WBGene00060929" CDS complement(join(287292..287403,287450..287640, 287699..287781,287855..287963,288239..288610, 288678..289000,289078..289159,290003..290086)) /locus_tag="CRE_20773" /note="contains similarity to Pfam domain PF01733 Nucleoside transporter; contains similarity to Interpro domain IPR002259 (Delayed-early response protein/equilibrative nucleoside transporter)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01031.1" /db_xref="InterPro:IPR002259" /db_xref="PFAM:PF01733" /db_xref="WormBase:CRE20773" /db_xref="WormBase:WBGene00060929" /translation="MSVKIFIAFTIVSISSMFPNNAFMNAHEYFYYKLRNVTHDEDPV NTTSSWFIKRQIREDAPTELQANFEAYLTVYGSIACVLGSILNVFATKSLSNSTRMIW GHLLVVVVFIPTIVLTLINFDDDQSFFFNLSMGLISIACFGSLGMMAGGVLGLSALFP SKYTQAVMIGQSCAGVLAALMSILCQAVTSNVILNGQMYFGFSLLMCFISLATYYYLT TLTPPIELETVDDMNGLIDNQEVQGFDDVNEVSIEAQASHFPPIDSDVTSENILEDGP KWAMYTDIIKKSSIDLTTISVVLIVTLAAYPGLTSLVHSTSRNHTWNSYFSAVASFLL YNVGDLIGRSSANSLRLPRKYLLVIAFFRFLLIPMIAMCNVSPRSHTHAMIPYDGVFV LLVILLSISHGFCITNATIGATMSIEKQSRELAGSIISLIGVTAAMMGGVLGVLIIKL V" gene <292817..>297106 /locus_tag="CRE_20705" /db_xref="WormBase:WBGene00060930" mRNA join(<292817..292826,293277..293550,294066..294170, 294258..294325,294524..294712,294764..294853, 294950..295087,295144..295420,295525..295685, 295733..295844,295902..296131,296305..296470, 296759..296829,296889..>297106) /locus_tag="CRE_20705" /product="hypothetical protein" /db_xref="WormBase:CRE20705" /db_xref="WormBase:WBGene00060930" CDS join(292817..292826,293277..293550,294066..294170, 294258..294325,294524..294712,294764..294853, 294950..295087,295144..295420,295525..295685, 295733..295844,295902..296131,296305..296470, 296759..296829,296889..297106) /locus_tag="CRE_20705" /note="contains similarity to Pfam domains PF00008 (EGF-like domain), PF07645 (Calcium binding EGF domain), PF00057 (Low-density lipoprotein receptor domain class A) (2), PF00058 (Low-density lipoprotein receptor repeat class B) (4)contains similarity to Interpro domains IPR000033 (), IPR006209 (EGF-like), IPR000152 (Aspartic acid and asparagine hydroxylation site), IPR002172 (Low density lipoprotein-receptor, class A, cysteine-rich), IPR001881 (EGF-like calcium-binding), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR013032 (EGF-like region, conserved site), IPR013091 (EGF calcium-binding), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DY529166" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01035.1" /db_xref="InterPro:IPR000033" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013091" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00008" /db_xref="PFAM:PF00057" /db_xref="PFAM:PF00058" /db_xref="PFAM:PF07645" /db_xref="WormBase:CRE20705" /db_xref="WormBase:WBGene00060930" /translation="MCNDPINITITTASSLIQTTSAPPISLPILKPESTVSPCDLIEE AAALHCIGPLVDYAADLSNNVLHPPLSAVEMTCDKYNQYMMCTQGVRPDCRQSRAPNI EFMYETICEEKFAAIMKEEKVCLLEVENDKNVKECFVNKTNTLRDETPDTVSTPTQNY ECTVIQAYVDCLIEREDTTCRDAVKIEISFLSMLAKRNSEARCELNTDATKARPKAQP LEECDTQGNCKCRLPGYYYEAARKKCLDVDECESLSSACSQKCINLPGTFECSCDQRF YKLAADNRSCERLDQSPMWLFFAHGQSVWNISTDGKSFQLQRAGLQKTAMIDIDVKEN RLYYADIGANVIERMNIEGTFPQAVQRFDVDGLEGIAVDWIGRNLYSLRREDILAQSL DGRFRQSVYKNVMKLPRSIALHPAKGIMFVTDWSANAFIAAASMDGSHFRKIVTDRIT WPNAVAVDIFAEKIYWADAFLDTIESANMDGTGRRIIIADAGSVPHVFGLAIADDFLY WTDWTYRGILRANKHNGENITVLAQTALLPYSLKIFHKTLQPEQTSTCDTRKCDQLCL LGENGAATCACGEGFDLQTDGKTCRSNCSESQIECGGADPKCISKIYLCDGLAQCSNQ ADELNCPPRICLPGQFQCHDNRKCLPPGGLCDEVADCADSSDEIYCSHQTKTSRGEFV LNSPSRKEKRSSDYWSENMI" gene 294400..294471 /locus_tag="CRE_32268" /db_xref="WormBase:WBGene00186676" tRNA 294400..294471 /locus_tag="CRE_32268" /product="tRNA-Pro" /db_xref="WormBase:CRE32268" /db_xref="WormBase:WBGene00186676" gene complement(296214..296286) /locus_tag="CRE_31708" /db_xref="WormBase:WBGene00186116" tRNA complement(296214..296286) /locus_tag="CRE_31708" /product="tRNA-Arg" /db_xref="WormBase:CRE31708" /db_xref="WormBase:WBGene00186116" gene complement(<297393..>299385) /locus_tag="CRE_20774" /db_xref="WormBase:WBGene00060931" mRNA complement(join(<297393..297764,297878..298335, 298381..298453,298498..298565,299232..>299385)) /locus_tag="CRE_20774" /product="hypothetical protein" /db_xref="WormBase:CRE20774" /db_xref="WormBase:WBGene00060931" CDS complement(join(297393..297764,297878..298335, 298381..298453,298498..298565,299232..299385)) /locus_tag="CRE_20774" /note="contains similarity to Pfam domain PF00084 Sushi domain (SCR repeat); contains similarity to Interpro domains IPR000436 (Sushi/SCR/CCP), IPR016060 (Complement control module)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00986.1" /db_xref="InterPro:IPR000436" /db_xref="InterPro:IPR016060" /db_xref="PFAM:PF00084" /db_xref="WormBase:CRE20774" /db_xref="WormBase:WBGene00060931" /translation="MSYTPTITATIPIGTVVNIVCYTGYSLSGNSIATCTSAGWSPSS VGSCVQQEVLGASCPAGIPAVLGATMTYSNGEPFGPYPTATVVTATCQVGYVPTGIMA STCSNGIWTPASLGLCELTGNEIGGTSCGRLGDPLGGTLVYSALGLGPYPTGTSATVL CNIGTTLSGSPTALCSNGVWNPLPGTCVSVLLRKGPAKGVPKGAPEKLVVGQNVTAAD DVPDDSKNVTAAPTGLMLSGEKCPPPIAPAFGEITYSGFSSKGTFDDGTTAALRCNLG YKPTGASFSTCRKGSFRPILGKCANGSEGSLPGVCVPLSPPKNARVVYIQSGSSLDFE DGTTGLLYCEEGYAVTGIATLQCQNGQWEPQSGFGMCDSI" gene complement(<299885..>305699) /locus_tag="CRE_20775" /db_xref="WormBase:WBGene00082939" mRNA complement(join(<299885..300087,300340..300468, 300546..301040,301088..301363,301431..301707, 301822..302031,302496..302723,302825..303034, 303320..303543,303625..303717,303769..303955, 304219..304392,304451..305121,305171..305521, 305603..>305699)) /locus_tag="CRE_20775" /product="hypothetical protein" /db_xref="WormBase:CRE20775" /db_xref="WormBase:WBGene00082939" CDS complement(join(299885..300087,300340..300468, 300546..301040,301088..301363,301431..301707, 301822..302031,302496..302723,302825..303034, 303320..303543,303625..303717,303769..303955, 304219..304392,304451..305121,305171..305521, 305603..305699)) /locus_tag="CRE_20775" /note="contains similarity to Pfam domain PF00084 Sushi domain (SCR repeat); contains similarity to Interpro domains IPR000436 (Sushi/SCR/CCP), IPR016060 (Complement control module)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01057.1" /db_xref="InterPro:IPR000436" /db_xref="InterPro:IPR016060" /db_xref="PFAM:PF00084" /db_xref="WormBase:CRE20775" /db_xref="WormBase:WBGene00082939" /translation="MKFTTLLTVIATITISVAFGKECGSNLKPEKLVVVGVWKRGFDN STAQYRISDEDLSVRGYERADSDKASSTVMLARHPEGCIINECGVRLSAMMQVNGAIL HTDNRMVKLNDSTMNNIEDEFYCAEKSGFCGANVPIYRLVKHSLTGPHYAYSFDNVGQ SLPGYEKEFFPLCYAWHQTPSVVLFNSSDDGVCLTLPDAQNARILYSSNQVNVFSIGT TATLQCNQGYVGNGTSSLLCTKDGWYPKRDEMGSCINQGKISIYFFIETLSLFPEPKK PLQLVVASDVTSQSSCSVPALTPNGNIVYSANVATSTSKTSVPSATRATVLCSLGFVP TTSVTSSKCVDGEWQPALPTCLSLLDLKCPILSAPRNGELVFTNSPKPPYSLDSTVSL KCDRNFFGMGNLTATCTSTGWDQKIGRCEPVGVRRLSESVSTGTPCTANVNPANGNLL YMQANPSQEYSSGTSVYLMCNLGFSLSGSVSSMCSNGVWTPTIGQCTSALSLGQITGS CEAIPARTNGTITYSSLGTYSSGTIATLTCNLMNTVSGSTTSTCLSGIWNPTLGNCIS SGTGVGGVGTGTTCPNPTVLNGQIIYSQGNTFDTTRPAMTTATLSCNSGYTVTGTSTS TCISGTFTPSLGTCTFGTSGSVGNTCSSPFIINGQVTFSQGNTYDLTRPSGTTATLTC NSGYTVSGTASSTCTNGVFNPTLGTCNMGTGGGIGTGTTCPNPTVLNGQITYSQGNTF DVSLPTTRPVMTTATLTCNSGYTLTGTSISTCISGTFTPSLGTCTFGTSGSVGNTCSS PFIINGQVTFSQGNTYDLTRPSGTTATLTCNSGYTVSGTASSTCTNGVFTPTLGTCNM GTGTGTGTGIQCTAMIAPLGGSVTYSNGGSMGPFPSGTTVTGTCTNGGAITGSATASC SNGMWTPTFLGTCSLIGGSTTGQCSALTVPSGAQATYSPFSLSTTSFTSGTVATVSCT SGGSMLGTSTCTNGLWSPMITGTCSGTGTGNTCTTLTRPVGETVTYDGQTSFATSFNS GVIARVTCTNGTQIGQSTCLSGQWTPAITATCSGSSTAIGTQCIGAIAPANSQITYSD GSMVLHSAGTTATLTCINSATISGNSFATCSNGVWTPTLGSCTSSGTNTGPCYTPPLT PTGATLTYSSGFFAPWTTGSTATMSCPAGQTAIGTTITTCSNAAWTPALGSCSGSGSS IGQANTTSTCSYLPIAPPFGSIVSSQQSPYSSGTVVTLTCDNGYQIQGTNATSTCTNG VFTEITATCIKT" gene complement(<309953..>310960) /locus_tag="CRE_20776" /db_xref="WormBase:WBGene00060932" mRNA complement(join(<309953..310315,310502..310625, 310738..310847,310889..>310960)) /locus_tag="CRE_20776" /product="hypothetical protein" /db_xref="WormBase:CRE20776" /db_xref="WormBase:WBGene00060932" CDS complement(join(309953..310315,310502..310625, 310738..310847,310889..310960)) /locus_tag="CRE_20776" /note="contains similarity to Pfam domain PF01467 Cytidylyltransferase; contains similarity to Interpro domains IPR005248 (Probable nicotinate-nucleotide adenylyltransferase), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR004820 (Cytidylyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00944.1" /db_xref="InterPro:IPR004820" /db_xref="InterPro:IPR005248" /db_xref="InterPro:IPR014729" /db_xref="PFAM:PF01467" /db_xref="WormBase:CRE20776" /db_xref="WormBase:WBGene00060932" /translation="MKRVALIAVGSFNPPTIAHLRMLETARSHLEAIDTHVVEGIMSP VADSYNNKPTLIKSKYRIEMVRAATKTSDWIRADDWECTRPTWTRTIDVLKYHRERIQ KKFGSDVGLMLVAGGDFVDTFPRILPDGSNLWNPSDILKIIVDFGLIVLTRDGSTPLN TLDSMPGFSEISGKIQFISDEVCPSAVSSTRLRAAISAKKSIKYATTDEVIEYIQENS LYQK" gene <312933..>314457 /gene="Cre-rab-5" /locus_tag="CRE_20706" /db_xref="WormBase:WBGene00060933" mRNA join(<312933..313026,313728..313816,313898..314209, 314323..>314457) /gene="Cre-rab-5" /locus_tag="CRE_20706" /product="CRE-RAB-5 protein" /db_xref="WormBase:WBGene00060933" CDS join(312933..313026,313728..313816,313898..314209, 314323..314457) /gene="Cre-rab-5" /locus_tag="CRE_20706" /note="contains similarity to Pfam domain PF00071 Ras family; contains similarity to Interpro domains IPR002041 (Ran GTPase), IPR003577 (Ras small GTPase, Ras type), IPR003578 (Ras small GTPase, Rho type), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR013753 (Ras); coded for by the following C. remanei cDNAs: DR776468" /codon_start=1 /product="CRE-RAB-5 protein" /protein_id="EFP00936.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR002041" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR013753" /db_xref="PFAM:PF00071" /db_xref="WormBase:CRE20706" /db_xref="WormBase:WBGene00060933" /translation="MAARNAGGAARPGGPNRTCQFKLVLLGESAVGKSSLVLRFVKGQ FHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI TNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANAYAEDNALLFM ETSAKTSMNVNDIFMAIAKKLPIGPAQGEPTGTVDMNQPQQQQKGSCCK" gene <315338..>317152 /gene="Cre-uev-3" /locus_tag="CRE_20707" /db_xref="WormBase:WBGene00082940" mRNA join(<315338..315395,315590..315725,315770..316172, 316473..316652,316772..316877,316923..>317152) /gene="Cre-uev-3" /locus_tag="CRE_20707" /product="CRE-UEV-3 protein" /db_xref="WormBase:WBGene00082940" CDS join(315338..315395,315590..315725,315770..316172, 316473..316652,316772..316877,316923..317152) /gene="Cre-uev-3" /locus_tag="CRE_20707" /note="contains similarity to Pfam domain PF00179 Ubiquitin-conjugating enzyme; contains similarity to Interpro domains IPR000608 (Ubiquitin-conjugating enzyme, E2), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like)" /codon_start=1 /product="CRE-UEV-3 protein" /protein_id="EFP01059.1" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR016135" /db_xref="PFAM:PF00179" /db_xref="WormBase:CRE20707" /db_xref="WormBase:WBGene00082940" /translation="MSDNPSTSGPPPIQPTSSRTVRRRRPTALPADDAPRNEVRILRP SEVPQREPMPEYKPIEFNRIIVPKDVPIERLIDYHNSDNTRNIVIPTFVSSEELRVEA EKTNETISFRSTNFVDPDIIWKEICKEQEKVEEEDSKDSDVEVYESGSESDQKSEIEA IVDDDEGVAEEMLDVRQEFIQKSMKLVGGTYGLFTTRLEKNEIGNTIYTVFQGPKGTP YEGGTYFLRINFGLHPDFFYVIPIIRFVTMMFHPSISKYGQYDVRNLMETTWNKHSTL IHLYRWLESEMVNLKDNMARKTVTELDEMSQPNIAHLAAGDWATFERLAIAMTKKMAG GSLTDSITAPTKTSGKCLLGGTAWDLLGEDEIDVVG" gene <327699..>330636 /locus_tag="CRE_20708" /db_xref="WormBase:WBGene00060934" mRNA join(<327699..327904,327963..328099,328699..328774, 329086..329564,329649..329879,329999..330137, 330225..330554,330624..>330636) /locus_tag="CRE_20708" /product="hypothetical protein" /db_xref="WormBase:CRE20708" /db_xref="WormBase:WBGene00060934" CDS join(327699..327904,327963..328099,328699..328774, 329086..329564,329649..329879,329999..330137, 330225..330554,330624..330636) /locus_tag="CRE_20708" /note="contains similarity to Pfam domain PF02755 RPEL repeat; contains similarity to Interpro domain IPR004018 (RPEL repeat); coded for by the following C. remanei cDNAs: DR781175" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00988.1" /db_xref="InterPro:IPR004018" /db_xref="PFAM:PF02755" /db_xref="WormBase:CRE20708" /db_xref="WormBase:WBGene00060934" /translation="MTSNEDITSRSHGPTKVKKSTVGDATSTTSSKSKGGRSPRKSIP FVSSKFWLRLVRPWKWRNLRRKVRRSDSDRSSSANRVNSVSNIPTTSPSLPELSSIVR EDSVEIPAGGSNDNSEAITYRPATSQYTSVSNHHTTENNSPQNPQPLIVDPTHISIVR TRIQDPQQESTSSEVQRVQFVQSTSSSRPSGDQAVFKAPPPPPALIIQPPPESRDSDE ENINYDQSTESEGEDGDESEEMKSSGVVNGRRGELSPQTSRMLKEGYRRIEAKEPNFM AQPDKPVLRRPGQPSRLRLNGKTGRTSKDVEPSSSSNYQSDQNHPSKLTDDSDSDAPI QYRDDPISLAAAAARRAANVAPPGSSTDSDTGDDEEDVPIPKNGLASKVARRDTIALK LDAPPCKDDINGQTPDDRKKLMKTASIKLARKLSERPTPEELEDRNILRRRGMTSSEA MEEKRKLLLRKLSFRPTIVQLKEQQIIQFNDYVEVTQAEVYDRKGEKPWTRLTPSDKA MIRKELNDFKATEMDVHEESRVFTRFHR" gene complement(<331677..>333711) /gene="Cre-prom-1" /locus_tag="CRE_20777" /db_xref="WormBase:WBGene00060935" mRNA complement(join(<331677..331904,332010..332149, 332194..332364,332418..332592,332669..332845, 332891..333018,333088..333255,333301..333531, 333579..>333711)) /gene="Cre-prom-1" /locus_tag="CRE_20777" /product="CRE-PROM-1 protein" /db_xref="WormBase:WBGene00060935" CDS complement(join(331677..331904,332010..332149, 332194..332364,332418..332592,332669..332845, 332891..333018,333088..333255,333301..333531, 333579..333711)) /gene="Cre-prom-1" /locus_tag="CRE_20777" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box); coded for by the following C. remanei cDNAs: DT937114" /codon_start=1 /product="CRE-PROM-1 protein" /protein_id="EFP01000.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE20777" /db_xref="WormBase:WBGene00060935" /translation="MDSSTPKRTYYLRSTDRAAQAFPTPKKPSSTATDKNVRISLRKR NTPTEGGRGQKRQRTLQSHGPPFKSPECINPPKKTVNEEQRVIVSLPARMSLEMETPF GNFGKLPTDVVFQILTRTPYTLLGRMSMTSTSWNRTVVSYMKTGSFRLRWITDIENSQ DSFNNVTPGSDSLYFAMGALIKFITANDKWSTRLHCLRTFLALSYEVGAPIAGLGKMI NAFAIRPDEEVMMDQIDDIVDMVFSVVGSLKDELNSVLVRPDVERQLENRDNLHVWFY EIELRRRTLALFLNNGTADPALGLNKYFLSSLMKIFKDLRGAMPTALFYLLFSPTIFH ENEEVIDFHRLSQISVLDMEDTVELKQFTRAIYALLRCKQLNNSVPWSKNTVFNLMEE ITTYPNPWSMNTFVSLHVLEPELVPIGVVARMNRNHEDEAGDMICTMKMLLHRWNMDV QGVMENAIEAIKAALCPIQRRTLFDRCWDWHQRNIDDLRVRFGPYSDIRAEIESQIEV MPVLMKLL" gene <334453..>338473 /locus_tag="CRE_20709" /db_xref="WormBase:WBGene00060936" mRNA join(<334453..334626,334683..334826,334876..335711, 335763..336189,336298..336423,336469..336749, 336799..336980,337056..337665,337744..337852, 337902..338099,338177..>338473) /locus_tag="CRE_20709" /product="hypothetical protein" /db_xref="WormBase:CRE20709" /db_xref="WormBase:WBGene00060936" CDS join(334453..334626,334683..334826,334876..335711, 335763..336189,336298..336423,336469..336749, 336799..336980,337056..337665,337744..337852, 337902..338099,338177..338473) /locus_tag="CRE_20709" /note="contains similarity to Pfam domains PF06883 (RNA polymerase I, Rpa2 specific domain), PF04561 (RNA polymerase Rpb2, domain 2), PF04567 (RNA polymerase Rpb2, domain 5), PF04565 (RNA polymerase Rpb2, domain 3), PF00562 (RNA polymerase Rpb2, domain 6), PF04560 (RNA polymerase Rpb2, domain 7), PF04563 (RNA polymerase beta subunit); contains similarity to Interpro domains IPR007120 (DNA-directed RNA polymerase, subunit 2, domain 6), IPR007641 (RNA polymerase Rpb2, domain 7), IPR007644 (RNA polymerase, beta subunit, protrusion), IPR009674 (RNA polymerase I, Rpa2 specific), IPR015712 (DNA-directed RNA polymerase, subunit 2), IPR007645 (RNA polymerase Rpb2, domain 3), IPR007642 (RNA polymerase Rpb2, domain 2), IPR007647 (RNA polymerase Rpb2, domain 5), IPR007121 (RNA polymerase, beta subunit, conserved site); coded for by the following C. remanei cDNAs: DR780108" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00990.1" /db_xref="InterPro:IPR007120" /db_xref="InterPro:IPR007121" /db_xref="InterPro:IPR007641" /db_xref="InterPro:IPR007642" /db_xref="InterPro:IPR007644" /db_xref="InterPro:IPR007645" /db_xref="InterPro:IPR007647" /db_xref="InterPro:IPR009674" /db_xref="InterPro:IPR015712" /db_xref="PFAM:PF00562" /db_xref="PFAM:PF04560" /db_xref="PFAM:PF04561" /db_xref="PFAM:PF04563" /db_xref="PFAM:PF04565" /db_xref="PFAM:PF04567" /db_xref="PFAM:PF06883" /db_xref="WormBase:CRE20709" /db_xref="WormBase:WBGene00060936" /translation="MDCDIASYHVSSFDFLVTEGCQFAAQAVPAEKFRLKNGDAVTMK FTSAQLHKPTLDNGAKLTSDTLPLYPAECRQRGLTYAGNLKVGIDVHVNGTRLDIIET ILGKVPIMLRSEGCNLRGMSRKELVAAGEEPIEKGGYFIVNGSEKVIRLLIANRRNFP IAIIRKTFKEKGKLFSEFGVMMRSVKENHTAVMMTLHYLDTGTMQLALQFRREIFYVP LMYVVKALTNKNDAVIMAGFKRGRNQDQFFSSCVLNMLAQCQEEGILHQESAIRAIGS RFRVAIADRIAPWEDDLEAGKFIIRECVLVHLDSDEEKFYMLAYMAQKLIALIKGECA PETPDNPQFQEASVSGHILLLILRERMENIIGVVRRKLEFMSSRKDFILTSSAILKAL GNHTGGEITRGMAYFLATGNLVTRVGLALQQESGFSVIAERINQLRFVSHFRAIHRGA FFMEMRTTDVRKLRPEAWGFICPVHTPDGAPCGLLNHVTASCRIVTHLSDNSSIPSML AELGMYTQKTVSLAPPGEELYPVLMDGRYIGYVPIAKAASIERYLRCAKVANDARIPY TTEIALVRRSTDIKNIQTQYPGIYILTDPGRLIRPVRNLAMDSVEHIGTFEQVYLSVV LDPEEAEPGVTMHQELHPSCLFSFAGNLIPFPDHNQSPRNVYQCQMGKQTMGTAVHSW HSRADNKMYRLQFPQQPMLKLEAYEKYEMDEYPLGTNACVAVISYTGYDMEDAMTINK ASYQRGFAHGTVIKVERINLVTDRERKTIFYKNPREDMKTVSADGLPIPGRRYFLDEV YYVTFNMETGDFRSHKFHYAEPAYCGMVRIVEQSESGSGAQHALIQWRIERNPIIGDK FASRHGQKGINSFLWPIESLPFSETGMVPDIIFNPHGFPSRMTIGMMIESMAGKAAAT HGENYDASPFVFNEDKTAINHFGELLTKAGYNYYGNETFYSGVDGRQMEMQIFFGIVY YQRLRHMIADKFQVRATGPIDPITHQPVKGRKKGGGIRFGEMERDAIIAHGTSFVLQD RLLNCSDRDVAYACRRCGSLLSVLMSSKAGAHLMKKKRSDNEPLDYTESQRCRTCDKD DQVYLLQVPRVFRYLTAELAAMNVKIKLGIEHPSKVTGS" gene <345992..>347950 /locus_tag="CRE_20710" /db_xref="WormBase:WBGene00060937" mRNA join(<345992..346105,346204..346297,346344..346411, 346538..346675,346723..346844,346926..347775, 347828..>347950) /locus_tag="CRE_20710" /product="hypothetical protein" /db_xref="WormBase:CRE20710" /db_xref="WormBase:WBGene00060937" CDS join(345992..346105,346204..346297,346344..346411, 346538..346675,346723..346844,346926..347775, 347828..347950) /locus_tag="CRE_20710" /note="contains similarity to Pfam domains PF00349 (Hexokinase), PF03727 (Hexokinase); contains similarity to Interpro domain IPR001312 (Hexokinase); coded for by the following C. remanei cDNAs: DR781187" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00967.1" /db_xref="InterPro:IPR001312" /db_xref="PFAM:PF00349" /db_xref="PFAM:PF03727" /db_xref="WormBase:CRE20710" /db_xref="WormBase:WBGene00060937" /translation="MSSIVCHPLIDTQNGIATDARIKKQRPPPLVVSRPRDLIQESCE RLVLSDQQLRRIMTLMEKSMEQGLSASKKNVAVKMLPTYVDAVPNGTEKGDFLALDLG GTNFRVLHIKLEGKETKMTGKIFRVPESIMRGTGEALFDHIADCMAKFMEENNLKDAP KLPLGFTFSFPCEQDGLTKGKLVTWTKGFKASGVEGADVVTMLRDACHRRKDIDIDVV ALLNDTVGTLMACAFQENTCQIGVIVGTGTNACYMERLDRIPKLAGYVDEHGVTPEEM IINTEWGAFGDDGTMDFLRTKWDDAVDRESINPGQHLYEKMISGMYMGECARVVLEDL AKQGLLFGGHSDAISIPHCFPTKFVSEIDSDLLEDDDRTFQKTYQILEDIGVEMITAN DCANVAYVCSLISTRAAHLTAAGIAMLLNRINKKQVTVGVDGSVYRFHPTYPTLLDAK IAELIVGDIEVRYKLMLSEDGSGRGAALVAAVATRLKEEKLAALSSSSSSSN" gene complement(<348763..>350582) /locus_tag="CRE_20778" /db_xref="WormBase:WBGene00060939" mRNA complement(join(<348763..349138,349191..349360, 349407..349700,350160..350241,350346..350415, 350462..>350582)) /locus_tag="CRE_20778" /product="hypothetical protein" /db_xref="WormBase:CRE20778" /db_xref="WormBase:WBGene00060939" CDS complement(join(348763..349138,349191..349360, 349407..349700,350160..350241,350346..350415, 350462..350582)) /locus_tag="CRE_20778" /note="contains similarity to Pfam domain PF00266 Aminotransferase class-V; contains similarity to Interpro domains IPR015422 (Pyridoxal phosphate-dependent transferase, major region, subdomain 2), IPR000192 (Aminotransferase, class V/Cysteine desulphurase), IPR003248 (Phosphoserine aminotransferase), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1); coded for by the following C. remanei cDNAs: DR409062, DY527566, DR779532, DR779618" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00938.1" /db_xref="InterPro:IPR000192" /db_xref="InterPro:IPR003248" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="PFAM:PF00266" /db_xref="WormBase:CRE20778" /db_xref="WormBase:WBGene00060939" /translation="MALEGRKINFAAGPAKLPEEVLLKMQEEQLNFNNLGVSVIEMSH RSKEFGVLLNETISLIRELMNVPDNFEILFMQGGGTGQFAAIPLNLKGSHDHADYIVT GAWSSKAADEAQKYIKVKKVFQPSKPYVTVPDQEKWVHDEKAAYLYYCANETVHGIEF TPTAPESHNVPLVADVSSNFMARPFDFKDHGVVFGGAQKNLGAAGLTIVIVRKDLIGK EQGITPSVFSYKEMIANNSLYNTPPTGGIYTTNLVLKWIKAKGGLQAIYELNLKKSGL IYGIIDNSNGFYHCAVDKRYRSIMNVCFRIGGPSGNDELEEKFLKGAIERNMISLKGH RSVGGIRASLYNAITLEETQVLATWMNEFEKQHNTN" gap 351892..351901 /estimated_length=10 gene complement(<352234..>352933) /locus_tag="CRE_20779" /db_xref="WormBase:WBGene00082936" mRNA complement(join(<352234..352398,352669..352736, 352780..>352933)) /locus_tag="CRE_20779" /product="hypothetical protein" /db_xref="WormBase:CRE20779" /db_xref="WormBase:WBGene00082936" CDS complement(join(352234..352398,352669..352736, 352780..352933)) /locus_tag="CRE_20779" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01034.1" /db_xref="WormBase:CRE20779" /db_xref="WormBase:WBGene00082936" /translation="MSSSVFLLLMAIIPIAHSGVLLTYPQARFPPLDYLPDDLTMPPC GVPKPTKPFYTTFHIGSEYNVSWITPASTNVFIEYGWKRNSHKPKCNLGLGKAVVERE SMLDCLETITHENNILSDDVSESDVP" gene <353550..>356393 /locus_tag="CRE_20711" /db_xref="WormBase:WBGene00060940" mRNA join(<353550..353674,353727..354128,354176..354685, 355430..355673,355715..356043,356101..356233, 356322..>356393) /locus_tag="CRE_20711" /product="hypothetical protein" /db_xref="WormBase:CRE20711" /db_xref="WormBase:WBGene00060940" CDS join(353550..353674,353727..354128,354176..354685, 355430..355673,355715..356043,356101..356233, 356322..356393) /locus_tag="CRE_20711" /note="contains similarity to Interpro domain IPR009448 (UDP-glucose:Glycoprotein Glucosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00959.1" /db_xref="InterPro:IPR009448" /db_xref="WormBase:CRE20711" /db_xref="WormBase:WBGene00060940" /translation="MRLHSIILLCILIFPTFGSSEKLVKTRIHSKWKKTSILVEISEC LSEQNDSLFWKFMDSIYLDDKEISTSKSDKKKSKMVILKFNSVLFSESDLEQYNLGIS IASRLLSSSEMNLLRFSVSTRIFSPRVEIHRQLSLKFKPEKCSLTAFFVFGSQKGCHL SQLNMNNYDGNRSSEGVFQFDHIYPINSTANRTIFIYGKLGSRELNNLITGAKKLVET EENLRFAVRFSDFSATEVSSRSPVSLSGYGVELAIKNTEYKAVDTSKVEDLPENLHGL NFKILKQKHPNQQKELDSLIDNLEKVGEIVPLKKWQLTDLGYKTCEKILENGSDLEGI EKLLQDFPSHARTISHRTLNETLLKSIKKSQELLQSSGIGNGLNVLTINGRIITARDE RIDLFSLAEVMKHEKKVVEDLVDIGFKLKDEEGNQVDHSKLLTLLDFTPVDLSTKAFD YRTAEPIVSSISDCKREIKIIQFLNNVESKGGPYRSIHLLLQPFPPDQIRPISRNIFN LIFFLDPFNSDDKLMDLVEQYLKSKVYIRIGVVPFFNERAHGMTIEEAVDSKPISPRK SKIWSSKDTLIKTLKCLFQNGNQVSDVLGPRAENRQYL" gene 355165..355235 /locus_tag="CRE_32217" /db_xref="WormBase:WBGene00186625" tRNA 355165..355235 /locus_tag="CRE_32217" /product="tRNA-Gly" /db_xref="WormBase:CRE32217" /db_xref="WormBase:WBGene00186625" gene complement(<357398..>359604) /gene="Cre-hsp-70" /locus_tag="CRE_20780" /db_xref="WormBase:WBGene00060942" mRNA complement(join(<357398..358252,358338..358991, 359067..359411,359530..>359604)) /gene="Cre-hsp-70" /locus_tag="CRE_20780" /product="CRE-HSP-70 protein" /db_xref="WormBase:WBGene00060942" CDS complement(join(357398..358252,358338..358991, 359067..359411,359530..359604)) /gene="Cre-hsp-70" /locus_tag="CRE_20780" /note="contains similarity to Pfam domain PF00012 Hsp70 protein; contains similarity to Interpro domains IPR001023 (Heat shock protein Hsp70), IPR013126 (Heat shock protein 70); coded for by the following C. remanei cDNAs: DR780164, DR775651, DR407933, DR778322, DT935433" /codon_start=1 /product="CRE-HSP-70 protein" /protein_id="EFP01048.1" /db_xref="InterPro:IPR001023" /db_xref="InterPro:IPR013126" /db_xref="PFAM:PF00012" /db_xref="WormBase:CRE20780" /db_xref="WormBase:WBGene00060942" /translation="MSFCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAF TDTERLVGDAAKDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFAVKAKQGKPV VEVEVKGEKREFNAEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKD AATIAGLNAIRIINEPTAAALAYGLDKGINEEKNVLIFDLGGGTFDVSILSIAEGSIF EVRSTAGDTHLGGEDFDSRMLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLS SSTEATVEVDSLFDGTDFYSKITRARFEELCADLFRKTLEPVEKALRDAKIDKGHIDE VVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAILSGVKDETIKDV LLVDVAPLSLGIETAGGVMTNLIDRNTRIPAKASKTFTTYADNQPGVSIQVYEGERAM TRDNHRLGTFELTGIPPAPRGVPQIDVTFDIDANGILNVSAEDKSTGKSNRITIRNEK GRLSQIEIDRMVNEAKQFEREDAEQRDKVSARNQLEGYAFQVKQALEEHGDKLSSEDR SRAKEAVEDTLRWMEANTLAEKDEIESKDRELKAVCQAILTKLHQSGGQQTGCGNPGS GGFNPSNYPQGPTVEEVD" gene complement(360107..360178) /locus_tag="CRE_32328" /db_xref="WormBase:WBGene00186736" tRNA complement(360107..360178) /locus_tag="CRE_32328" /product="tRNA-Gly" /db_xref="WormBase:CRE32328" /db_xref="WormBase:WBGene00186736" gap 360573..360804 /estimated_length=232 gene <360948..>364497 /locus_tag="CRE_20712" /db_xref="WormBase:WBGene00060943" mRNA join(<360948..360974,361103..361180,361227..361393, 361560..361629,361682..362068,362220..362771, 362822..362989,363033..363144,363200..363302, 363353..363638,363695..363823,363877..364026, 364068..364274,364336..>364497) /locus_tag="CRE_20712" /product="hypothetical protein" /db_xref="WormBase:CRE20712" /db_xref="WormBase:WBGene00060943" CDS join(360948..360974,361103..361180,361227..361393, 361560..361629,361682..362068,362220..362771, 362822..362989,363033..363144,363200..363302, 363353..363638,363695..363823,363877..364026, 364068..364274,364336..364497) /locus_tag="CRE_20712" /note="contains similarity to Pfam domain PF06427 UDP-glucose:Glycoprotein Glucosyltransferase; contains similarity to Interpro domains IPR000886 (Endoplasmic reticulum, targeting sequence), IPR009448 (UDP-glucose:Glycoprotein Glucosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00957.1" /db_xref="InterPro:IPR000886" /db_xref="InterPro:IPR009448" /db_xref="PFAM:PF06427" /db_xref="WormBase:CRE20712" /db_xref="WormBase:WBGene00060943" /translation="MKYRVRGVMKGSQFLENFGLSKVPHALLNGYLLDVSSPENFDVL LQENVQKQTIRLQMMIYHGMINDNVKIDEWWLAKETNPDIVARINQKAFSDMITSVDY FPKSSLSSLKSSNVSTWIIADFQNPINRFFAANTLKSVARKSENRIAIISNPKSSSRN SESESCSFEYGDLENLIETLESTDNCIKTTVSSKFLIANGINPGETVIVSNGLIIGPF SDEREYLKVEDFDYLKELWNEKGAGRTSEFFKKQYSVDDVDIKFYSAMARMYRKDVSR ISFDEFKNSENIITFPPENASLPSVTITWISNPVSREAQQIISIVKLMSKVLNAKVEV RKVEIKFTLDQASFQIIFNPAAEILENPIKRFYRFVAKEELEFNDFGAVENHFAVFSN LPQKQLLTMSIETNDGWMIELKEAEYDLDNILLDSTSEDVESVYSLEHILVEGQSRKS SGEASDGLEIELQSGDTTYDTLVMLNLGYYQLKAEPGVWNLHLREGSSSEKYKFLKVD SKQVEKDIKVVVDSFTGKWIQLVVDEVESKKTPEPSKIEKLMNSAKSFFSTPAPSDTI NVFSLASGHLYERFMRIMIVSVMKNTKTQKVKFWFLKNYLSPKFKKSIPLLADFYGFD YELVEYKWPKWLHQQTEKQRVMWGYKILFLDVLFPLNVEKIIFVDADQVVRADLQELM DFNLNGSPYGQSFEPFIFRYVPFCESRKEMEGFRFWKTGYWNNHLMGRRYHISALYVV DLKAFREFSAGDRLRGRYDSLSADPNSLSNLDQDLPNNMIHEVPIKSLPQDWLWCETW CDDNSKKTAKTIDLCNNPLTKEPKLNSAQRIIGEWKDLDEEISNIIRNDNRTKRSKLS ESNEEKEEL" gene 360958..361029 /locus_tag="CRE_31982" /db_xref="WormBase:WBGene00186390" tRNA 360958..361029 /locus_tag="CRE_31982" /product="tRNA-Gly" /db_xref="WormBase:CRE31982" /db_xref="WormBase:WBGene00186390" gene complement(364724..364795) /locus_tag="CRE_31903" /db_xref="WormBase:WBGene00186311" tRNA complement(364724..364795) /locus_tag="CRE_31903" /product="tRNA-Gly" /db_xref="WormBase:CRE31903" /db_xref="WormBase:WBGene00186311" gene 365016..365086 /locus_tag="CRE_31875" /db_xref="WormBase:WBGene00186283" tRNA 365016..365086 /locus_tag="CRE_31875" /product="tRNA-Gly" /db_xref="WormBase:CRE31875" /db_xref="WormBase:WBGene00186283" gene <365335..>366999 /locus_tag="CRE_20713" /db_xref="WormBase:WBGene00060944" mRNA join(<365335..365339,365392..366025,366087..366172, 366261..366372,366420..366665,366712..366851, 366936..>366999) /locus_tag="CRE_20713" /product="hypothetical protein" /db_xref="WormBase:CRE20713" /db_xref="WormBase:WBGene00060944" CDS join(365335..365339,365392..366025,366087..366172, 366261..366372,366420..366665,366712..366851, 366936..366999) /locus_tag="CRE_20713" /note="contains similarity to Pfam domain PF01053 Cys/Met metabolism PLP-dependent enzyme; contains similarity to Interpro domains IPR000277 (Cys/Met metabolism, pyridoxal phosphate-dependent enzyme), IPR015422 (Pyridoxal phosphate-dependent transferase, major region, subdomain 2), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01024.1" /db_xref="InterPro:IPR000277" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="PFAM:PF01053" /db_xref="WormBase:CRE20713" /db_xref="WormBase:WBGene00060944" /translation="MSDNFDWPVGNNEAKERLGERYGIHNIKNIKSISRFSSLHLDTK ISASHAKPLSNADPVVVPIYHSSTYRFKTVNQFNEPNHGSNFVYRRCGNPTTENVEVV INEIEGGAGSLLYNSGLAAISAVFLEFLNSGSHLISMSPIYSGTSSFINETLKRFGVE VTFVDVEKEEDFADAVEKAIRPNTKLIYFETIANPTMAVPDVLGTLEVAKKHNIRTCI DATFSSPYNIQPLKLGADISLHSCSKYIGGHTDVIAGVVTVAHYEDWKKLKLQQLTTG SSLSPYDAALLTRGLKTLALRVDRISENAQKTAEYLESHPKIDHVYYPGLPSHPQHKY AKQVMKQFSGMIAFDVGTAENAINLVENLKLIIHAVSLGGTESLIEHPLSMSHGKQLL RDADGPTVAPGLLRFSVGIENVEDIIGDLKKALDQL" gene <367496..>367751 /locus_tag="CRE_20714" /db_xref="WormBase:WBGene00082943" mRNA join(<367496..367583,367627..>367751) /locus_tag="CRE_20714" /product="hypothetical protein" /db_xref="WormBase:CRE20714" /db_xref="WormBase:WBGene00082943" CDS join(367496..367583,367627..367751) /locus_tag="CRE_20714" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01065.1" /db_xref="WormBase:CRE20714" /db_xref="WormBase:WBGene00082943" /translation="MGCCWPKITVTPPAPEDVDSSVQNSVPPQSPGRLQLPPSPPPQS SGSTTNTSPQRPQFRVQIPGCHWSTH" gene complement(368224..368296) /locus_tag="CRE_31786" /pseudo /db_xref="WormBase:WBGene00186194" tRNA complement(368224..368296) /locus_tag="CRE_31786" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CRE31786" /db_xref="WormBase:WBGene00186194" gene <368514..>369345 /locus_tag="CRE_20715" /db_xref="WormBase:WBGene00082942" mRNA join(<368514..368574,368823..369006,369084..>369345) /locus_tag="CRE_20715" /product="hypothetical protein" /db_xref="WormBase:CRE20715" /db_xref="WormBase:WBGene00082942" CDS join(368514..368574,368823..369006,369084..369345) /locus_tag="CRE_20715" /note="contains similarity to Pfam domain PF01053 Cys/Met metabolism PLP-dependent enzyme; contains similarity to Interpro domains IPR000277 (Cys/Met metabolism, pyridoxal phosphate-dependent enzyme), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01061.1" /db_xref="InterPro:IPR000277" /db_xref="InterPro:IPR015421" /db_xref="PFAM:PF01053" /db_xref="WormBase:CRE20715" /db_xref="WormBase:WBGene00082942" /translation="MKYRVRGVMVSMDAFQAFDGELWRKHIVVEVAFVDVEKEEEYFA DAVEKAIRPNTKLIYFETIINPTMTIPDILRTIELAKNFLDPNRNEFQIRVVIDVPFA SLSTFNLHVSVFSVLGGLHVFRDESRPDVAPELLRFGGRLAIKRNLTKVISFSSTFVS NSIFLSFT" gene 368524..368595 /locus_tag="CRE_32545" /db_xref="WormBase:WBGene00186953" tRNA 368524..368595 /locus_tag="CRE_32545" /product="tRNA-Gly" /db_xref="WormBase:CRE32545" /db_xref="WormBase:WBGene00186953" gene complement(<375570..>380839) /gene="Cre-lin-41" /locus_tag="CRE_20781" /db_xref="WormBase:WBGene00056438" mRNA complement(join(<375570..375731,375808..376081, 376161..377420,377505..377584,377635..377972, 378016..378115,379056..379179,379228..379535, 379689..380151,380222..380513,380653..>380839)) /gene="Cre-lin-41" /locus_tag="CRE_20781" /product="CRE-LIN-41 protein" /db_xref="WormBase:WBGene00056438" CDS complement(join(375570..375731,375808..376081, 376161..377420,377505..377584,377635..377972, 378016..378115,379056..379179,379228..379535, 379689..380151,380222..380513,380653..380839)) /gene="Cre-lin-41" /locus_tag="CRE_20781" /note="contains similarity to Pfam domains PF00630 (Filamin/ABP280 repeat), PF00643 (B-box zinc finger), PF01436 (NHL repeat) (6)contains similarity to Interpro domains IPR001298 (Filamin/ABP280 repeat), IPR013783 (Immunoglobulin-like fold), IPR003649 (B-box, C-terminal), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR000315 (Zinc finger, B-box), IPR013017 (NHL repeat, subgroup), IPR015943 (WD40/YVTN repeat-like), IPR001258 (NHL repeat)" /codon_start=1 /product="CRE-LIN-41 protein" /protein_id="EFP00964.1" /db_xref="InterPro:IPR000315" /db_xref="InterPro:IPR001258" /db_xref="InterPro:IPR001298" /db_xref="InterPro:IPR003649" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR013017" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00630" /db_xref="PFAM:PF00643" /db_xref="PFAM:PF01436" /db_xref="WormBase:CRE20781" /db_xref="WormBase:WBGene00056438" /translation="MAMTTTTNSAMTSMETEGGAIQQQQQSSGGEGPRRHHHQTDIID ADANDSGNELSMGGSSSEGDSMSHHRGEHSPNQHHQDSLLGQTATSSIQGFQQFTGSL FDTPPSMLSSPQQQQHQFHHGSFSPSGFGLGIQNDTFRCAVCSKIGRNGILQFVCAHK TCQTCYQMTSSQFDSHLRPSCTLCGAGSATAANFPPQMFLSPTLTTPPHQGGLLLDTV GSSSAKSSTPQQPARAFSFSLSGLPGSPSPIMMPRMSTPASMMRPPMGFPDIDMNGTT STWSPMQVPPPLTSLKSLPSLGAQSPMMSQNVFDSLAVNDDTPVFSPLSPTNTSSHMP PSLMASSDVPRHSATIAPPRTSICSTPRLPAGSTSSTMTQVPSPYQSQQAFPISLPLA PSPVQQQPLQNQLAPIQCQGCESHVSFAFCMQCQEALCAHCVQAHQRVRATKQHAFVE LSQLMATLMNRAAAQAQQQQAQLVQSGVPTRQALGSAGSGDVFFAGHATEVVNESTPT TTTTGGSGGSSPRSSSVCGQHESPIVGFCEHCPQTNSSLCAICVAQHPGQHRVQPIGD IRMAVGELTNESQLLQWQCEKTGETIKRLIEGVVTNATTAVNEIRVAFDTHVSALEER RKELLKRVETVKSLKLSVLISQAEHLKSKQADLHKAIQNATKSMDSSTETDESVLRQV FDQLTACQTCSSTTEPNNNMLNVLMLACQVNEDDRLKFTAPQDGILLNKARQFGNIES GPCAKNSSLAGDTFKKAIRERQTMIYVQLRDACGDPLSSSIAATQPSSQPLLPHQTPH LEQAMPTSDVQAFVISPNGSPIEVGMTPRENGVVAFSYFPAIEGTYTLNILVKGTPIS GCPTTMEVRRGRNYDEISAKGPILTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNN RVQIFDKDGNFLSKFGTTGNRPGQFDRPAGITTNTSNHIVVADKDNHRIQVFDENGMF LLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYF FKNLDSPRGLCYLPDGQLLITDFNNHRLAVLSPRNMSEMKVYGSEGDADGMFVRPQGV VIDPEGHILVCDSRNNRIQVFASDDMRFIGSFGLGPVTNTTGFQMPQELPAPYSSLAG PFGAPAFSSTPTPLTPSPRQLLDRPTDLAVGPDGRIYVVDFGNNCIRVF" gene complement(<384579..>386352) /locus_tag="CRE_20782" /db_xref="WormBase:WBGene00056437" mRNA complement(join(<384579..384654,384812..384892, 384954..385219,385301..385386,385498..385578, 385633..385657,385868..385933,386344..>386352)) /locus_tag="CRE_20782" /product="hypothetical protein" /db_xref="WormBase:CRE20782" /db_xref="WormBase:WBGene00056437" CDS complement(join(384579..384654,384812..384892, 384954..385219,385301..385386,385498..385578, 385633..385657,385868..385933,386344..386352)) /locus_tag="CRE_20782" /note="contains similarity to Pfam domain PF06162 Caenorhabditis elegans protein of unknown function (DUF976); contains similarity to Interpro domains IPR010381 (Protein of unknown function DUF976, Caenorhabditis species), IPR016125 (Peptidase C15, pyroglutamyl peptidase I-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01036.1" /db_xref="InterPro:IPR010381" /db_xref="InterPro:IPR016125" /db_xref="PFAM:PF06162" /db_xref="WormBase:CRE20782" /db_xref="WormBase:WBGene00056437" /translation="MMGPECIGDVADMLTMCNRMRVDTNYTRDVVVTGFDTPFEDFDE NPSAVVVDELMKIPIENVKIFPHKIPVAYEAVTEKLPELRKNCPDDVLHLATHSVRNT IYFQQKAFSHGYCREDINGYVPEGNKIEDEDEEEEQKKLKPFVDFDYLVEEVTEKCGL DGERYGGLKVEKSDDPGRFVGGYLYYLSIREGPVNTLYINVPPFEGECTKEAVANVIR EVIRFLTRNDF" gene complement(<388191..>389357) /locus_tag="CRE_20783" /db_xref="WormBase:WBGene00082938" mRNA complement(join(<388191..388263,388320..388400, 388451..388713,388764..388849,388963..389068, 389119..389202,389349..>389357)) /locus_tag="CRE_20783" /product="hypothetical protein" /db_xref="WormBase:CRE20783" /db_xref="WormBase:WBGene00082938" CDS complement(join(388191..388263,388320..388400, 388451..388713,388764..388849,388963..389068, 389119..389202,389349..389357)) /locus_tag="CRE_20783" /note="contains similarity to Pfam domain PF06162 Caenorhabditis elegans protein of unknown function (DUF976); contains similarity to Interpro domains IPR010381 (Protein of unknown function DUF976, Caenorhabditis species), IPR016125 (Peptidase C15, pyroglutamyl peptidase I-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01055.1" /db_xref="InterPro:IPR010381" /db_xref="InterPro:IPR016125" /db_xref="PFAM:PF06162" /db_xref="WormBase:CRE20783" /db_xref="WormBase:WBGene00082938" /translation="MMGPNTLGEVSDMLTLCDRVPEDISGNIMLDWTKEVVVTGFKGS FEGTPDDVSSVIIDELQKVDVENRILLLIKLDASYEEVMKKIPELFTEHQDFVLHLAS YSEQNKTTIFIEQKAFMSGYTKPDKNEFIPEGNRVKSESKEQELVTKVNVDDLVKELT EKCGLNGQKYGGLTVEKSEDPGRFIEGYTYFLSLDANPSSRLLVKIPAFQGECTKEAV ASVIRELIIIATRSF" gene complement(<389904..>391510) /locus_tag="CRE_20784" /db_xref="WormBase:WBGene00060946" mRNA complement(join(<389904..390497,390551..390984, 391045..391352,391404..>391510)) /locus_tag="CRE_20784" /product="hypothetical protein" /db_xref="WormBase:CRE20784" /db_xref="WormBase:WBGene00060946" CDS complement(join(389904..390497,390551..390984, 391045..391352,391404..391510)) /locus_tag="CRE_20784" /note="contains similarity to Pfam domains PF01467 (Cytidylyltransferase), PF01121 (Dephospho-CoA kinase); contains similarity to Interpro domains IPR004821 (Cytidyltransferase-related), IPR001977 (Dephospho-CoA kinase), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR004820 (Cytidylyltransferase); coded for by the following C. remanei cDNAs: DR781461, DR778570, DR779790, DT935081" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00972.1" /db_xref="InterPro:IPR001977" /db_xref="InterPro:IPR004820" /db_xref="InterPro:IPR004821" /db_xref="InterPro:IPR014729" /db_xref="PFAM:PF01121" /db_xref="PFAM:PF01467" /db_xref="WormBase:CRE20784" /db_xref="WormBase:WBGene00060946" /translation="MHSKYGLLVLNSKNVQKLKQLLTSAATSLSSRLYIRLNPDQPRT DELVSKIYLNSANSCPKLDVRLLVSDIPGKIENYTAIGEEKPEKIEKIEKKYKKVVLG GTFDRLHNGHKVLLNKAAELASDDIVIGVTDKEMILKKSLFEMIEPVEFRIKKVVEFV EDISDGAKCLAEPITDPFGPSTRIKDLEAIVVSRETIKGADAVNKKRNEQGMTQLDII IVELIEGSDEILNETKISSSSKRREDLGVLLRPVRRVPRETDRPYIIGLAGGIASGKS HSGKYLKEKHGFDVIDCDKLAHTCYEKGSSLNRKIGEHFGSDILIDGIVDRKKLGSIV FSDKSKLRELSELVWPEVKSKAAEIVEKSTAKVVGKIKKKNVTVSDHFIISNVKFITV IEAAALIEAGWHKSLAETWTVFVPAEEAVRRVVERDNLTKEQAIDRMSSQITNKERID SSNLVLCSLWKYEETRAQVDRAVNDLMKRI" gene complement(<392986..>394843) /locus_tag="CRE_20785" /db_xref="WormBase:WBGene00060947" mRNA complement(join(<392986..393492,393569..393668, 394076..394467,394580..>394843)) /locus_tag="CRE_20785" /product="hypothetical protein" /db_xref="WormBase:CRE20785" /db_xref="WormBase:WBGene00060947" CDS complement(join(392986..393492,393569..393668, 394076..394467,394580..394843)) /locus_tag="CRE_20785" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01027.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE20785" /db_xref="WormBase:WBGene00060947" /translation="MNHIHDFCSIVSHYFSYSNFSIKKEKERRSHNRMAAPPQKELIR AQNGNYEVTKPLATGTFGSIYKAKRESDGKLFAVKCESLNMKSSLLRQMSVVLASIQY PSPFFATIEERGTVPQRFLFVVMPLVGLSIYFDQNFSFDVQYGENLIDLMHSVRERKF SMSTGLHLAEQTLTAIRDLHRNGFIHRDIKPTHFCIGRESEDQYHHVFLLDFGLCKRP RFANKNNEAEEQMRKNAILYRGVVKYASVHAHQGKNLGYKDDMESWWYMVLEFFLGAL PWALLNKESEQDVLHLKKRLTAQMVAACWKTTSETSSAFFELLSIVREPKDVAEFVDY DRIADGITKLFEKSKANPQEPPDWDCMTDYKGPSYQQVPMIAPPEVGLKPEMEFGKND PGAAAGSVEPMKSAEGAKKKKKKVRCFS" gene <395126..>400817 /gene="Cre-sdc-1" /locus_tag="CRE_20716" /db_xref="WormBase:WBGene00060948" mRNA join(<395126..395169,395344..395576,395656..395879, 395932..396221,396301..396661,396751..396933, 396978..397219,397266..397648,397834..397970, 398060..398137,398341..398616,398724..399080, 399124..399855,400051..400198,400294..>400817) /gene="Cre-sdc-1" /locus_tag="CRE_20716" /product="CRE-SDC-1 protein" /db_xref="WormBase:WBGene00060948" CDS join(395126..395169,395344..395576,395656..395879, 395932..396221,396301..396661,396751..396933, 396978..397219,397266..397648,397834..397970, 398060..398137,398341..398616,398724..399080, 399124..399855,400051..400198,400294..400817) /gene="Cre-sdc-1" /locus_tag="CRE_20716" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type); coded for by the following C. remanei cDNAs: DT937113" /codon_start=1 /product="CRE-SDC-1 protein" /protein_id="EFP00992.1" /db_xref="InterPro:IPR007087" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE20716" /db_xref="WormBase:WBGene00060948" /translation="MVQDISVDQSMCSTRSNKARILPDKKLDSDIVPSEITVVANFYK DQNQDIIAELPRLPYITSPNYGDADDYENYPNKMSSWFENTKKPGKKQSDKPPNPKKR YYCIKCEWSFDTGQQLFRHKIMHRTPGSFACQVCLTLFAHAFNTHSHWRSICPQITKS RSDIELSRSDMSEIRNFVLCAMGMANRAQQYHVLGGIIFFPSPWFLKDKYNIIDTHYQ RPCHLCHVTVPDKFLECHGDVHRGRFRIDGRIYGDFFCHICGQVFQLKQSLIEHWRFD CPELMNYTPDDIFLDDEEMAALAWLFLQSTISQDKIIAMAGNTMLTLERWARDHAKKY GFLHLLDRYYHYPQEIWPLKLKTGMDIMNDSIPIMGPNAFLRPPADGNGMTLNNPVLP VHATNLLATVCPVFYATGAVFTEIIGANEDPKEPKKLHRILMRYTTTGSIIDKYKISI RTCPILRSQKINGLRRPEYYNIEKPFFPKSPSGGQSKSNTTENALYSKSWTCHARFDT RMEQTDRKENICDICMRIVGIRSLKEHWTLNCVPLRIIFPEAEDRMCVNKTIALQIKN LFKKHKTNVTHIWVHRPKKDKETESEPAERIGERRKIHVEYVESAMKNIRQSLAVLIE ESRKEQDQRRELEAKLAYSVVHAIICPHCGGRINQVRFFSHLENRHFYDTETKKICRE DVENWKNGGCSESYKLLETIIPKEFERTGRSMLPLIPKEIYNKACEAHKILAKRPTQG DISFNDPSSTNAYDPWTENPTTRSVVLDKPLALCDKVPKRLEKSVVTLERKKKVGLEV YFPETTVADNSSIVNQSQEGDEYRTTGSTKKMKQIENKDYKDIITGEELPADLIQIRI SQDKQFFGDTQEDEARKNRLNIKTIGEFYQQVELCKEDDDYSSSEQEEEDGLEKSDDE NEDDEGDLSPDEEGKPKKKKRKPNPPGQSDDDDDDEEDDEDDENNDDDNCPDSTVIKA KVQISGNILLYLFFQKRDGCDPDDESEEAMKERNQVRQFERRKHKEMSLNFKGTPEEF NETQFAKLSINVDPSKLEQLKYLTRVESDNSEDSEDSDNDGDVGDGRNLLAFSMAYEN SGDFLQSALHFNKHCKEQLPPKQSGHLKEKLTRLQKSTAIDLDNDWHIDQDGPPDAVR DKKSGTIYIGGYVRPMEKNEHDDLKSVYLTRGEYARQFKIFNCEDKEGHFKFYWPMDK ITIEIAIENYREFERVEMVDADILFATLLAEHDPSNKDRQKSKSKPHTTISGKRANLI IANNLELDQMKFEHPVRAVAEKEVEPEEWEDMMNLEPEEPLDDDEPARKKSKRVKDDD DDDDDMGFPGPRVRANRVRMREEFYDNYDPKVDGGDEFGPLLRNYSRASTSTVIRDSD LYEDDKDIPSISTVPPKPKLRRRGN" gene complement(<401238..>402657) /locus_tag="CRE_20786" /db_xref="WormBase:WBGene00060949" mRNA complement(join(<401238..401424,401474..401697, 401769..401958,402010..402354,402401..>402657)) /locus_tag="CRE_20786" /product="hypothetical protein" /db_xref="WormBase:CRE20786" /db_xref="WormBase:WBGene00060949" CDS complement(join(401238..401424,401474..401697, 401769..401958,402010..402354,402401..402657)) /locus_tag="CRE_20786" /note="contains similarity to Pfam domain PF01697 Domain of unknown function; contains similarity to Interpro domain IPR008166 (Protein of unknown function DUF23)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00954.1" /db_xref="InterPro:IPR008166" /db_xref="PFAM:PF01697" /db_xref="WormBase:CRE20786" /db_xref="WormBase:WBGene00060949" /translation="MYLNSNIPPYFHDLLRKYGHLYGLIILKSRTLYLFVIFLVFLHL FLHPLPVLRRVRNAYTYKMKELDNDEKDLFFVSAYYYGNEYSLYENQVSLTFIAPRDA HWDRRKIIVIRSNGSTSVLEPMKVHRATPHNVCKFVTLVGTVTLKDDLMDLEILVSRN IAGIRYLPADNKQRDLVVCTPPIYNNVGWQSILLASHIYSRFGGHLQIYLSNTNPAFF DFLEELKRRKGISMNAFPDFYGNSKLNEVEFGGITVANSDCLSKYKSSASFITFLEWN ELVLPKSFNSYFSEFANFFESEIFVGLLEFRNSKGISKVVTRPLLISSVWLNEPVERP FKLKSKQMDSNKIYEISVSDDVDSMIRGDFPGSDILKMEDRRAIGLGIRKLVELIYFI GFTSIWPY" gene <403016..>404171 /locus_tag="CRE_20717" /db_xref="WormBase:WBGene00060950" mRNA join(<403016..403136,403239..403355,403400..403551, 403656..403877,403959..>404171) /locus_tag="CRE_20717" /product="hypothetical protein" /db_xref="WormBase:CRE20717" /db_xref="WormBase:WBGene00060950" CDS join(403016..403136,403239..403355,403400..403551, 403656..403877,403959..404171) /locus_tag="CRE_20717" /note="contains similarity to Pfam domain PF01467 Cytidylyltransferase; contains similarity to Interpro domains IPR004821 (Cytidyltransferase-related), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR004820 (Cytidylyltransferase); coded for by the following C. remanei cDNAs: DR407685" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01028.1" /db_xref="InterPro:IPR004820" /db_xref="InterPro:IPR004821" /db_xref="InterPro:IPR014729" /db_xref="PFAM:PF01467" /db_xref="WormBase:CRE20717" /db_xref="WormBase:WBGene00060950" /translation="MNSLASNQPARFSDDPEVIEERKLIDYSKKVTIEDAKNGKVTRP VRVYADGIYDMFHHGHAKQFLQIKQAFPNVYLIVGVNSDEETLKYKGRTVQSEDERYE AIRHCRYVDEVCRASPWTFPIQYLKDLKVDFISHDALPYQGPQGEDIYEKYKNAGMFL ETQRTEGISTSDSITRIIRDYDTYARRNLKRGYSPKELNVGFLTTSKYRIQDKVDEVC EMGREFLQVWKTNAEHYIDSFLQTFARDASISDEVKKSASGVKMEYGHGGVKEKNK" gene <405044..>406290 /locus_tag="CRE_20718" /db_xref="WormBase:WBGene00060951" mRNA join(<405044..405167,405214..405330,405552..405703, 405797..406018,406111..>406290) /locus_tag="CRE_20718" /product="hypothetical protein" /db_xref="WormBase:CRE20718" /db_xref="WormBase:WBGene00060951" CDS join(405044..405167,405214..405330,405552..405703, 405797..406018,406111..406290) /locus_tag="CRE_20718" /note="contains similarity to Pfam domain PF01467 Cytidylyltransferase; contains similarity to Interpro domains IPR004821 (Cytidyltransferase-related), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR004820 (Cytidylyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01020.1" /db_xref="InterPro:IPR004820" /db_xref="InterPro:IPR004821" /db_xref="InterPro:IPR014729" /db_xref="PFAM:PF01467" /db_xref="WormBase:CRE20718" /db_xref="WormBase:WBGene00060951" /translation="MSDPLASFMPAPFSDDPEVIRKRDLIDYSTQITLEAAKSGDISR PVRVYADGVYDMFHYGHANQFLQIKQALPNVYLVVGVCSDEETLKYKGRTVQPEEERY EAIRHCRYVDEVFKASPWTCPIPFLKELKIDFMSHDALPYQGPLGEDIYEKHREAGMF LETQRTEGISTSDSICRIIRDYDTYVRRNLQRGYSATDLNVGFFTTSKYVIQDTVFEV QKMGRGLLQTWKSKSDYLIDGFVKTFAGDATNISPPKPEDLENVEI" gene complement(<406659..>407466) /locus_tag="CRE_20787" /db_xref="WormBase:WBGene00060952" mRNA complement(join(<406659..406846,406892..406979, 407034..407370,407417..>407466)) /locus_tag="CRE_20787" /product="hypothetical protein" /db_xref="WormBase:CRE20787" /db_xref="WormBase:WBGene00060952" CDS complement(join(406659..406846,406892..406979, 407034..407370,407417..407466)) /locus_tag="CRE_20787" /note="contains similarity to Pfam domain PF00300 Phosphoglycerate mutase family; contains similarity to Interpro domain IPR013078 (Phosphoglycerate mutase); coded for by the following C. remanei cDNAs: DT935541" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01049.1" /db_xref="InterPro:IPR013078" /db_xref="PFAM:PF00300" /db_xref="WormBase:CRE20787" /db_xref="WormBase:WBGene00060952" /translation="MTITYPRKIWIIRHAEREDNINRHWKKLNGADGLASDNSMLSQR GKQQAKECKTRFKNAQFSHIFASPFDRTIETASIIVEDRDMKVKAEGGLCEALYLCEK PPGFWETDKLAKKFPLVDVDYIPVYSRYTLPKEGCGDDACVTRVGTTLRKIFEKYEGN LVLVGHGASIGACHEVLMGDFKYVGQATVSEFEETAPGKYRCNFSSDSSHLSDKKNLR PW" gene complement(<408000..>408967) /locus_tag="CRE_20788" /db_xref="WormBase:WBGene00060953" mRNA complement(join(<408000..408244,408297..408657, 408704..>408967)) /locus_tag="CRE_20788" /product="hypothetical protein" /db_xref="WormBase:CRE20788" /db_xref="WormBase:WBGene00060953" CDS complement(join(408000..408244,408297..408657, 408704..408967)) /locus_tag="CRE_20788" /note="contains similarity to Brugia malayi Zgc:92155, putative.; TR:A8QCA6" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00981.1" /db_xref="WormBase:CRE20788" /db_xref="WormBase:WBGene00060953" /translation="MNILHHKSWHVRTKSNMERVRRDERKAAEDEQRVLDRQIQAENE RRINHLRQKADDRMTTMFGTSSSSGPAAKDVSISDETGHVNLFQDLEREERKNLGTGN KEYEAEKAAEKKEWESKMGIQVYFADNTNDLNKKKEWYEEMPLRRNPDGLTTSRKFDA LPCISRGKEETEKEKKKKKRKRKHSDSDSDSDDGGKRKHKKDKKKKQKKKHHRDSSEE RRLEEEYDRERKQKMAKLRDERIKRERLEKQRQYELLHPEEVQKKKKMEEEEEKKGKK KYNSQFNPEFFRK" gene complement(<409406..>413956) /locus_tag="CRE_20789" /db_xref="WormBase:WBGene00060954" mRNA complement(join(<409406..409558,409612..409719, 409796..411583,411630..411761,411845..412093, 412146..412470,412524..412750,412795..413050, 413176..413777,413831..>413956)) /locus_tag="CRE_20789" /product="hypothetical protein" /db_xref="WormBase:CRE20789" /db_xref="WormBase:WBGene00060954" CDS complement(join(409406..409558,409612..409719, 409796..411583,411630..411761,411845..412093, 412146..412470,412524..412750,412795..413050, 413176..413777,413831..413956)) /locus_tag="CRE_20789" /note="contains similarity to Pfam domain PF02145 Rap/ran-GAP; contains similarity to Interpro domain IPR000331 (Rap/ran-GAP)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01014.1" /db_xref="InterPro:IPR000331" /db_xref="PFAM:PF02145" /db_xref="WormBase:CRE20789" /db_xref="WormBase:WBGene00060954" /translation="MFARKGKSSDVQASISRFTDLNRDCVSRVKHLKILLDTLTTNEK RQLLDEHSFETFHLVDELLLVNDVSSQIDSAIEAESGLWTLEQVLCLAPELVGSGWQR HAIESLLKKAVYPKNLMAVRKIAIRLFLVFYQCLGVYGKATPDLDRVFQCLLPFFPLK SGENAEDVLNEYCQSSGTGDWCERLRNGPIKSTASAAQTSKERAQMLQVYLDKFLEYC TRETVRIEWNDEGKRQECANFIIDKVIKLYMGECFTELETNGVDVFGGWEGADEQGEP LDTADPVVIARYWLIRWINNIASATHQPTNGPPQSAHSSLILYRNALFSSHKATNVAL TLMREAMKLPLACSNVTHKVVNVLSSWLLQYEIPPFVASGEVSIERCSLLLANILLSF FHSPYLAQSGERHSSAISIAFAILTSCKQLVSHRIQLPKPLPQKFWSELMSGLCAVAS KICHQSDIFSQHVSAAFTSTLISNVVIIKAVRRIEIDDDVWDEVHEVMKRGVWIPMAE QWAAIVNSVTRALILHLAHIDIFSREEALRKATEVSQTSRRQAIESANAMEEPRKESS EAGDSMSSTNTISEDNVFHDTDDITNAVTSWSGDKLAWLQTWRRVISLVDPYTNSSAH VAIDCMSLTIKNLLSVNLHPLAHWLACRLVTVPPILLPRCVPALSAILNESSVRRPPP LLSANILLCFIRLMQSKEQSVVPAICGLSANELSIVAPRALEHLPKMLQAARTSKDSK MSSNSLKLFAMLCSSYPGAEQILLDHLVHTDVSENAVVIVNTLAILIVQKAQIDLVLS ALKVIETHQFAMRLIPLFCSAIATLAQFSSTTLLQALLRAASLLRDERQRTEIEWQMV KLCVQWPQPQMPLVIRGILADRHMVLHGELVGLGGQYPIRGFDVSRWNSSGSQAPGSQ ATSQEDKTVYINRQTAIISLSRPTPSKFEITSRTVVARHIWDLDTLETPRASTRHVTN WLRKEALKGKKPGRESQGILGAMDDPFDDLPRAPSSASTGTGSLGSGALGSPVEGSAQ FASMIETSRRQPQPLGSGSGTMGSGPVGSGPTPAFTPNSKLLEWRSLSASLGFVPLVS QVHTNFLRDLKHLDQTSSREVHKVAVIFVGDTQDDRASILSNTSASPQFDDFVSELGW EIKVGRGHEGYSGGLPVETRAPYYADAESECIFHVSTWLNGDVQQKWKHIGNDEVHVV WTENYRKVYTRETIATKFCDVLIVLEHVGDKMVRVRVDTASALEFGPLFDGALVTMSE LSQLVRLTVINASRAYRLARVEHSRPLRHREEVFCNEALGHMRPMALAQSINHLYVPT I" gene complement(<415866..>418323) /locus_tag="CRE_20790" /db_xref="WormBase:WBGene00082928" mRNA complement(join(<415866..416398,416734..416994, 417038..417277,417324..417660,417742..417872, 417966..418133,418290..>418323)) /locus_tag="CRE_20790" /product="hypothetical protein" /db_xref="WormBase:CRE20790" /db_xref="WormBase:WBGene00082928" CDS complement(join(415866..416398,416734..416994, 417038..417277,417324..417660,417742..417872, 417966..418133,418290..418323)) /locus_tag="CRE_20790" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00952.1" /db_xref="WormBase:CRE20790" /db_xref="WormBase:WBGene00082928" /translation="MEDDDDLIEITDEQHARIRATIGKRPEFDHLILRDLQLSDSEEH RCESEEESEDDEGGELFYKRNTLRVTTVAQEAAFKRFQALPKAVREAEIQKNLNDLKQ YADEKDLAMEKILGKLTTESENQEEEEEEAIVGEGDERENSDGETSEGGEEVDVDDYV DDPDGLSKEEMRDWWTAMNEIWDDMYGDRHEKSMTSLIKNDGSSGEMKTPKTEIGCVG SSKILEHKPCLFDSQKPLIPSLRNKSNQKTSCLFLSQSRSRRENAFQKESEITVVADP RCDLEETGIRRRTVSDSVNSLCSDGASVNSNSIALDDFFSSRPNTPEYPEMPIDKDRN GIIVDQEKETLNSTICVSNTNDGDVGKEEEEEKNLSRSPIKQVPHEMMESRESFQAAR PPTPNRQESQNQISIHQIIPEYVQQKVSTHVPSPSTETTRPIIEKHETCRKRVLSPIS IPNIASSVKSKRAKSEMTVENTKKLPDRASRSRKDSTKDNIEKPIVIKRGRGRPKKVR RKKCEGHHANLRKVQCNSVHFFCSIYISRKWSHEINKFLQNNTLFLRRLQNFLMYFDQ N" gene <418748..>421466 /gene="Cre-pif-1" /locus_tag="CRE_20719" /db_xref="WormBase:WBGene00060955" mRNA join(<418748..418923,418969..419103,419179..419292, 419365..419445,419489..419678,419750..419848, 419893..420004,420049..420365,420419..420525, 420600..420960,421066..421317,421368..>421466) /gene="Cre-pif-1" /locus_tag="CRE_20719" /product="CRE-PIF-1 protein" /db_xref="WormBase:WBGene00060955" CDS join(418748..418923,418969..419103,419179..419292, 419365..419445,419489..419678,419750..419848, 419893..420004,420049..420365,420419..420525, 420600..420960,421066..421317,421368..421466) /gene="Cre-pif-1" /locus_tag="CRE_20719" /note="contains similarity to Danio rerio ATP-dependent DNA helicase PIF1 (EC 3.6.1.-).; SW:Q7ZV90" /codon_start=1 /product="CRE-PIF-1 protein" /protein_id="EFP00995.1" /db_xref="WormBase:CRE20719" /db_xref="WormBase:WBGene00060955" /translation="MSKILKNEEKDGISESPSNCTYCYTLECSLRIESTSSTKKKTPI NSKNAILTVGRNAHRKIHLRIELKTTSSGQPAVVSYDATDAVVHLQNVANGKCTVEIP SLSLMFQMFNCAPRKLNVFMKSLQAKLDIMKMDNQSLSALPKQFSRPPAVFNVLSPLS VGEMRRVKKMREPSSLVTNPLTDNSKLSTSTTPKRRNSSMNLAEGLQTRIINRSIGLK RMTSFARDDREKAEVLTSLKPLKDAPSIAERIQLSDEQKSVVRCVINSRSSVFFTGSA GTGKSVILRRIIEMLPAGNTYITAATGVAASQIGGITLHAFCGFRYENSTADQCLQQV LRQPHMVKQWKQCAHLIIDEISMIECDFFEILEYVARAVRNNDHPFGGIQLIITGDFF QLPPVTKDNDPTFCFESEAWDRCIQKTIVLKNVKRQNDNLFVKILNLVRMGKCDQKSA DLLKQSSKNEFASHVIPTRLCTHSEDADRINQQSLNETIGEQKIFHAYDDNEFDSKIR TLAVKKLILKVGSQVMLIKNLDVNKGLCNGSRGFVEKFSENGNPIIRFVSQDVSIEIR RSKFSIRVPGCDAPFVRRQLPLQLAWAISIHKSQGMTLDCAEISLERVFADGQAYVAL SRARSLSAIRIIGFDISCVRANSKVIDFYKSIENNYDEDDDDFSRPSSKIKRFRSL" gene complement(<421726..>424379) /locus_tag="CRE_20791" /db_xref="WormBase:WBGene00060956" mRNA complement(join(<421726..421795,421844..422200, 422311..422751,422856..422934,423039..423302, 423429..423746,423792..424059,424107..>424379)) /locus_tag="CRE_20791" /product="hypothetical protein" /db_xref="WormBase:CRE20791" /db_xref="WormBase:WBGene00060956" CDS complement(join(421726..421795,421844..422200, 422311..422751,422856..422934,423039..423302, 423429..423746,423792..424059,424107..424379)) /locus_tag="CRE_20791" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00991.1" /db_xref="WormBase:CRE20791" /db_xref="WormBase:WBGene00060956" /translation="MKTKTLLLLFLNIHLIQPHLQCLRWFPEPVSYKLEVSNLKLGED FFMIDDFLMNRDENSTSKVVEDYVIGKLNEGKSGGYSDIFSIVFKQLPSVRQLIISMF CLIVSVVIFFIVWMMDVSEFFEFIGIRFKFTEHRSGLTIIPIFCCIGLLVLHSNIRDS FAATTKGIVDLYNTNDGEFAPLEARIARKMEMVPCLFKKDFAKGLISHRLVDRYTDNM NMTSLFDRVRDTLFGRIPTMIDSLPKTILQDLLKRNVVFDKKEMNNNCMNLLKITNES LMTWRTEMNFNILHSELGNLEAEYIDIILKALDVSIPIFIKALGTIEDFVEKYHSTVL ILPKKHIIEFYETCAESSITISLVITVILTALLMVKFEFKRKWCKRVAELSVPVTMSF TIICLFLFAALIVRITFIQLVHQQVEHENFAAFEKVNPFNLTENGAIYSINYGNVLKK AVEQETTLFHLLAAESEYNENRRFIPRSINGKLLFNSTKKFNATIEKLVEIMNTKYEK YVEISCEKSRLAFEKLEKEVEKSHCSENRSLGILNEMRTLLNTTHHTACNLKTNPIDK SKMRSSSYSAWVQSLLPLKNQALIRKASVQDVRSPMQVYLIFENPSRKLRPTVLENML HMAVLIVSMAPIFLILAIYFMCILPLLMGDEESEWAESDSRSSVLEENRSKNSSNEKS GLKNYEN" gene complement(<427401..>430869) /locus_tag="CRE_20792" /db_xref="WormBase:WBGene00060957" mRNA complement(join(<427401..427939,428010..428249, 428300..428587,429635..429746,429794..430015, 430062..430248,430336..430441,430490..430605, 430772..>430869)) /locus_tag="CRE_20792" /product="hypothetical protein" /db_xref="WormBase:CRE20792" /db_xref="WormBase:WBGene00060957" CDS complement(join(427401..427939,428010..428249, 428300..428587,429635..429746,429794..430015, 430062..430248,430336..430441,430490..430605, 430772..430869)) /locus_tag="CRE_20792" /note="contains similarity to Pfam domains PF00246 (Zinc carboxypeptidase), PF02244 (Carboxypeptidase activation peptide); contains similarity to Interpro domains IPR003146 (Proteinase inhibitor, carboxypeptidase propeptide), IPR000834 (Peptidase M14, carboxypeptidase A)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01064.1" /db_xref="InterPro:IPR000834" /db_xref="InterPro:IPR003146" /db_xref="PFAM:PF00246" /db_xref="PFAM:PF02244" /db_xref="WormBase:CRE20792" /db_xref="WormBase:WBGene00060957" /translation="MRLNIFSFLFILTFIYERIQAIHNTDENSAFHNFKLIRINPETE NSVKYLRSLYEDSSPYELDFWQPPTHIGAIVDLTVAPSDAPKFVRDLESKNINYIVAV NDLSKAIENERGSDKFYNPIAGFAYDKYNSLDEIHSEMKRLKKEYPTMITLIDIGQSH ENRTLLVMKITGKRNPLGSKISMWIDGGIHAREWISPATAMYIAHELILGYENDATVA KLMDHIDFYILPVMNPDGYEYSREKNRMWRKNRSPAKCHRQTFSTVCCSGVDLNRNFD WFWASTGSSSDPCHDTYHGSSAFSEPESQAVRDFLEQNTPEAFISLHSYSQMWLIPYG HRKQSYPQDYHTGLRPLALRATKALYELYGTKYQVGTGADLMYEASGGSHDWAKGQLK VPYAYLIELRPKNTMMGHGFLLPEREIVPTGLETFESIKVVADELVAQFVEPVIRAKL TTTTRPSIPPYRRGYSIIDTTTMDPVEELAPVKKTFVAPTTTEATTTTTTTTTTEAPT TTTATTTVPTTTTTTEASTTTTESTTTTTTTITTTTEEPTTTSTTPIPSTITDSEPDS NATVVLPTETYPSEVTDKSEVSSTTLTPFEETSEIPVEEVIVFSILTDSSQLISIFSG NKPASEMHGLR" gene complement(<431628..>434470) /locus_tag="CRE_20793" /db_xref="WormBase:WBGene00060958" mRNA complement(join(<431628..431791,432150..432278, 432324..432498,432545..432604,432653..432804, 432922..433036,433082..433201,433662..433763, 433891..434241,434315..>434470)) /locus_tag="CRE_20793" /product="hypothetical protein" /db_xref="WormBase:CRE20793" /db_xref="WormBase:WBGene00060958" CDS complement(join(431628..431791,432150..432278, 432324..432498,432545..432604,432653..432804, 432922..433036,433082..433201,433662..433763, 433891..434241,434315..434470)) /locus_tag="CRE_20793" /note="contains similarity to Pfam domains PF00246 (Zinc carboxypeptidase), PF01549 (ShK domain-like), PF02244 (Carboxypeptidase activation peptide); contains similarity to Interpro domains IPR003146 (Proteinase inhibitor, carboxypeptidase propeptide), IPR000834 (Peptidase M14, carboxypeptidase A), IPR003582 (Metridin-like ShK toxin); coded for by the following C. remanei cDNAs: DT934659" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00953.1" /db_xref="InterPro:IPR000834" /db_xref="InterPro:IPR003146" /db_xref="InterPro:IPR003582" /db_xref="PFAM:PF00246" /db_xref="PFAM:PF01549" /db_xref="PFAM:PF02244" /db_xref="WormBase:CRE20793" /db_xref="WormBase:WBGene00060958" /translation="MKSTSSPQMLILLFFSFISLSLQSFSVYRLLPKTQTDFQAIQRL YKNATDHDLNFWKTGKDKHGFWDVMVELNNEKFLMDYLQINDISHVKTIEDVEKLISK HENNKTLSKMFPRLWDDSSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTT EGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLE EITFVVVPCLNPDGYEFTRSSTNPHVRLWRKNRSKMQCRKDIWGRNRCCRGVDLNRNF DFHFRESGTSDDPCSEIYQGPAPFSEPEAKAVRDALLSQRYKGRTDAYITLHTYSQIW IHPYGHKKDAYPGDIKDLYEVGKKAAQALKRVYGTKYVVGSGADTLYPASGGSEDWAK HEAKVKFVYLLELRPDEKNWDGFILDEKELIPTARETWEGVRVVAEAVLDRIVAQKAS TPREAPKARGFRFGDGTEGSCFDVRHACKRWVQEREELCRTVPIFMRENCAYSCNFC" gene complement(<437179..>438008) /gene="Cre-mps-3" /locus_tag="CRE_20794" /db_xref="WormBase:WBGene00082927" mRNA complement(join(<437179..437217,437273..437692, 437778..437884,437996..>438008)) /gene="Cre-mps-3" /locus_tag="CRE_20794" /product="CRE-MPS-3 protein" /db_xref="WormBase:WBGene00082927" CDS complement(join(437179..437217,437273..437692, 437778..437884,437996..438008)) /gene="Cre-mps-3" /locus_tag="CRE_20794" /note="contains similarity to Xenopus laevis Transcription initiation factor TFIID subunit 3 (TBP-associated factors3).; SW:Q5EAW9" /codon_start=1 /product="CRE-MPS-3 protein" /protein_id="EFP00947.1" /db_xref="WormBase:CRE20794" /db_xref="WormBase:WBGene00082927" /translation="MPTEKASSSSSSPWIKVVIFVFVGILIVAGIVFAVIFCMKKNKK KAEEEKKKKGSSSSSSKSKSNKDKKKKKKTRVVSSSSKKSAKVAVPPPRGRSIIPQIP LRTKSTDETVTPTTSFTSSPTHEVAPPAPSAHRPPILPPLGLAPPVDDGQRASDEQNA SRDNVTVLCTYGNGWKAKGKPPPDFSFSIESE" gene <439813..>443555 /locus_tag="CRE_20720" /db_xref="WormBase:WBGene00060959" mRNA join(<439813..439874,440757..440838,441558..441694, 441853..441928,442028..442168,442344..442629, 442678..442952,443002..443086,443145..443364, 443447..>443555) /locus_tag="CRE_20720" /product="hypothetical protein" /db_xref="WormBase:CRE20720" /db_xref="WormBase:WBGene00060959" CDS join(439813..439874,440757..440838,441558..441694, 441853..441928,442028..442168,442344..442629, 442678..442952,443002..443086,443145..443364, 443447..443555) /locus_tag="CRE_20720" /note="contains similarity to Pfam domains PF00246 (Zinc carboxypeptidase), PF01549 (ShK domain-like), PF02244 (Carboxypeptidase activation peptide); contains similarity to Interpro domains IPR003146 (Proteinase inhibitor, carboxypeptidase propeptide), IPR000834 (Peptidase M14, carboxypeptidase A), IPR003582 (Metridin-like ShK toxin); coded for by the following C. remanei cDNAs: DT933558" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01009.1" /db_xref="InterPro:IPR000834" /db_xref="InterPro:IPR003146" /db_xref="InterPro:IPR003582" /db_xref="PFAM:PF00246" /db_xref="PFAM:PF01549" /db_xref="PFAM:PF02244" /db_xref="WormBase:CRE20720" /db_xref="WormBase:WBGene00060959" /translation="MNVFFLIFSSFLVLEIAAHQKKFTVWRVQPTTQDQVDILQNLYM HDVKLDFWKSPSEAGKEVHVMISDEKTPKFLQEMDDNSIAHSVMIDDVQKVIVEQKEK RDKLRKQVRLHDWREQKVQFNLAQYHSFADVINYLNSLAITYPELVSVQPIGTTHEGR QIPLIKITNKRNGGTKRGIWVDGGIHAREWVSPSTVLYFIHQLVTQYDKDAQIRQFVD TLEWYIVPLLNPDGYEYSRSSNDPEIRLWRKNRSPPKCIQQATGLFQPPTTTCCQGVD LNRNFDWFFGQVGSSTDPCSEIYQGAYAFSEPETAAVRDFVQRHRISTFLTFHSYSQI LMYPFGHQVRTYSNDLNDLRSTALSAAQALNSVYNTQYKVGTGADTLYPASGGSEDWA KGKAHVKYSFLFELRPEEQVWDGFLLAENQIIPTARETWEAVKVIAAKTIELPSNTHR APPKRCVDHDSLCPSWAQGGACENWPEMRLRCPRSCQVCV" gene complement(<443943..>444962) /locus_tag="CRE_20795" /db_xref="WormBase:WBGene00082933" mRNA complement(join(<443943..444153,444214..444525, 444643..444803,444846..>444962)) /locus_tag="CRE_20795" /product="hypothetical protein" /db_xref="WormBase:CRE20795" /db_xref="WormBase:WBGene00082933" CDS complement(join(443943..444153,444214..444525, 444643..444803,444846..444962)) /locus_tag="CRE_20795" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01006.1" /db_xref="WormBase:CRE20795" /db_xref="WormBase:WBGene00082933" /translation="MAFIDDGSISSYKKMKLAEVGIGIEHGSILQNLTTGYETGAEST LRVLEFYGSDRFIVINFWTRTYYFMKRNDKYMMRSNKPTIKPSFDHFVRIYFICAPGN ARSALILFGEQATLRKLKGSDGDSDVTKSAKSKKKTKRRAPIEMEIGNKTVKRCRKNK KNREKRSNKSNEKQVNRDISKAVPNKKDTRRMERRALIFLKVSLVFAHFGFGVAIFIN LLALLGFFLYFKRVKPIPVVVKEKGEKEPGKVAATTTDTKTKSDKKDK" gene complement(<445742..>447517) /gene="Cre-gpa-16" /locus_tag="CRE_20796" /db_xref="WormBase:WBGene00060960" mRNA complement(join(<445742..445861,446017..446250, 446324..446453,446553..446629,446676..446763, 446811..446998,447165..447335,447452..>447517)) /gene="Cre-gpa-16" /locus_tag="CRE_20796" /product="CRE-GPA-16 protein" /db_xref="WormBase:WBGene00060960" CDS complement(join(445742..445861,446017..446250, 446324..446453,446553..446629,446676..446763, 446811..446998,447165..447335,447452..447517)) /gene="Cre-gpa-16" /locus_tag="CRE_20796" /note="contains similarity to Pfam domain PF00503 G-protein alpha subunit; contains similarity to Interpro domains IPR001019 (Guanine nucleotide binding protein (G-protein), alpha subunit), IPR011025 (G protein alpha subunit, helical insertion), IPR001408 (G-protein alpha subunit, group I)" /codon_start=1 /product="CRE-GPA-16 protein" /protein_id="EFP00978.1" /db_xref="InterPro:IPR001019" /db_xref="InterPro:IPR001408" /db_xref="InterPro:IPR011025" /db_xref="PFAM:PF00503" /db_xref="WormBase:CRE20796" /db_xref="WormBase:WBGene00060960" /translation="MGCIMSQEDEAAKRRSKKIDRLLREDAESSNRTVKLLLLGAGES GKSTILKQMRIIHDVGYTTEERKVFRGVVYGNIILSLNAIIRAMEQLQISFATMDHES DARKLLMFSTTGEEDELPEELVVLMKSVWSDEGIQKALERSREYQLNDSAGYYLSQLD RICAPNYIPTQDDILRTRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFEDV TALIFCVALSEYDMVLVEDCQTNRMRESLKLFDSICNNKWFTETSIILFLNKKDLFEE KIQKSPLTHCFPEYTGANNYEEASAYIQQQFEEVNKRTAGQKNQEIYTQFTCATDTNN IRFVFDAVTDIIIRDNLRTCGLY" gene <449417..>451722 /gene="Cre-him-19" /locus_tag="CRE_20721" /db_xref="WormBase:WBGene00060961" mRNA join(<449417..449508,449683..449831,449919..450046, 450231..450413,450508..450587,450855..450948, 451055..451153,451197..451276,451339..451413, 451472..451541,451636..>451722) /gene="Cre-him-19" /locus_tag="CRE_20721" /product="CRE-HIM-19 protein" /db_xref="WormBase:WBGene00060961" CDS join(449417..449508,449683..449831,449919..450046, 450231..450413,450508..450587,450855..450948, 451055..451153,451197..451276,451339..451413, 451472..451541,451636..451722) /gene="Cre-him-19" /locus_tag="CRE_20721" /note="coded for by the following C. remanei cDNAs: DT935680" /codon_start=1 /product="CRE-HIM-19 protein" /protein_id="EFP00943.1" /db_xref="WormBase:CRE20721" /db_xref="WormBase:WBGene00060961" /translation="MDSTVTNSLNVSNLESPKSSSSSLFNDSSYRWKRTPEKSLSFDA DVENLEVSEPFVIKFHNISNGERGQQHKIDVACQLDDFIEMPIADAGKCLDCMTDDRI QLDNVEIEIKICAPTSKIAIENVIRRYIERRERCRTNVPVKRIALFIYDFTYAKELAP ILGRLAPNCIILNLGIPKMKTYPLQPSMESRYVADFISQFVGTRNTCETLRVLRIFNF VSLDSHLQKALSKCSHLHHLTISNIDDVGLFELPTIEAVFLDSCDFSITMFDEMFAEK HPRLFPNANTFGFLRCPVELSIRAVKEWSMDRKADERTELFFYQPERDFRKFLFETSK SFEVVNDDRELEGEIQIKGHNGGPLITVFNKDRVYKATTILDDI" gene complement(<451917..>453695) /locus_tag="CRE_20797" /db_xref="WormBase:WBGene00060962" mRNA complement(join(<451917..452033,452135..452573, 452645..452851,453667..>453695)) /locus_tag="CRE_20797" /product="hypothetical protein" /db_xref="WormBase:CRE20797" /db_xref="WormBase:WBGene00060962" CDS complement(join(451917..452033,452135..452573, 452645..452851,453667..453695)) /locus_tag="CRE_20797" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01022.1" /db_xref="WormBase:CRE20797" /db_xref="WormBase:WBGene00060962" /translation="MTEWVPPPTTTTTTTTTTTVDPCESSHPLDLTRRLRDTAGYNKI YMAKDFSTARNEFPDLRGLAHKPPADYHCGKRCQRSSQLIRKIIKTGQPAEAERAWWD EDEWEEGRRRRSRAADWRDNEDGTSNSNSLLSRNTGTSRHILGKLPLIYTTSTSVVSG MTVAVECDDETGEFNSGGYSLCTTCRAVRHLPSTYFPRVINELICSQKACLRGEGKCI QRVMPMKVLRNVGTRECARWQMSQIDVRTCCDCMLNPNSPLVTYL" gene <455854..>465000 /gene="Cre-pde-6" /locus_tag="CRE_20722" /db_xref="WormBase:WBGene00060963" mRNA join(<455854..456378,460309..460401,461191..461270, 462739..462792,462874..462925,462982..463083, 463156..463364,463411..463879,463963..464619, 464691..464784,464855..>465000) /gene="Cre-pde-6" /locus_tag="CRE_20722" /product="CRE-PDE-6 protein" /db_xref="WormBase:WBGene00060963" CDS join(455854..456378,460309..460401,461191..461270, 462739..462792,462874..462925,462982..463083, 463156..463364,463411..463879,463963..464619, 464691..464784,464855..465000) /gene="Cre-pde-6" /locus_tag="CRE_20722" /note="contains similarity to Pfam domain PF00233 3'5'-cyclic nucleotide phosphodiesterase; contains similarity to Interpro domains IPR002073 (3'5'-cyclic nucleotide phosphodiesterase), IPR000014 (PAS), IPR003607 (Metal-dependent phosphohydrolase, HD region)" /codon_start=1 /product="CRE-PDE-6 protein" /protein_id="EFP01051.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR002073" /db_xref="InterPro:IPR003607" /db_xref="PFAM:PF00233" /db_xref="WormBase:CRE20722" /db_xref="WormBase:WBGene00060963" /translation="MENMGKRKRRRDMEKKKKMGGIRLHGGKDAPSQAQQMTTSLLKK KNKREEKKKRRNWGEKYERERRHEKSEKRREKEREMAGLASFGRGGGSQQQHSTLLEE AYTHIHTQHTEHQCIAMRWCCGGSYSENGGGGSGSSSRTPHQQPTPLLTVATGSATSN THDTFGPMQVKMHKTAVIVTEGTGESVLLDSLRASGWNCTISFPTQATSDVESICPLA VFIDLRVPHPSQIAKDVSSVSTEEVLIVSIAEKHISEKRRRALGQSNIIHHVTWNTRD VTLFDYVGRLANRIRALPALFAVLDETDQAVEVCDEQRVVQYVNRAYENVTGCIRSEV IGQPESEMRRKSLPRARGEEERRRSSDWKFIRVPFANNSQFVYMKRSNTTGEAAIFRD VSLKSLKSQTGGIEAPISEVLTMLRDVSSRVDGEPAQTIKDAMKVLSSHELYAPSINR FRDADRIATQYYDGLIRLHHPARQRKRSVVDAHREKRGSHGERRRVSADVKNALENDN CWKFDILHLEKVSDHHALSQVGMKVFERWKVCDVLGCSDELLNRWILSIEAHYHAGNT YHNATHAADVLQATSFFLDSPSVAIHVNESHAVAALLAAAVHDLDHPGRGNAYLINTR QSLAILYNDNSILENHHIALAFQLTLQHNANVNIFSNLSREEFIQMRHAMVEMVLATD ISRHFEYLAKFNKMHVTDVAEEQRDTNSLTICDMLVKCADISNPAREWGLCQRWAHRI VEEYFEQTREEKEKGLPVTMEVFDRNTCNVPITQCGFIDMFAREAFATFTEFAKLGEL SDQLESNYEKWKLMTSQWTPSHNTNLVL" gene complement(<467231..>471629) /locus_tag="CRE_20798" /db_xref="WormBase:WBGene00060964" mRNA complement(join(<467231..467626,467678..467808, 467861..467972,468163..468369,468495..469332, 470398..470744,470880..471049,471148..471259, 471309..471384,471446..471553,471601..>471629)) /locus_tag="CRE_20798" /product="hypothetical protein" /db_xref="WormBase:CRE20798" /db_xref="WormBase:WBGene00060964" CDS complement(join(467231..467626,467678..467808, 467861..467972,468163..468369,468495..469332, 470398..470744,470880..471049,471148..471259, 471309..471384,471446..471553,471601..471629)) /locus_tag="CRE_20798" /note="contains similarity to Pfam domain PF07528 DZF; contains similarity to Interpro domains IPR003604 (Zinc finger, U1-type), IPR006561 (DZF), IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type); coded for by the following C. remanei cDNAs: DR782250" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00984.1" /db_xref="InterPro:IPR003604" /db_xref="InterPro:IPR006561" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF07528" /db_xref="WormBase:CRE20798" /db_xref="WormBase:WBGene00060964" /translation="MYGGYQGAYGAYGSQQYAAAANAANAANRANAYQQGHPQPAQNY YTGVNPYANYGYGGVNAPLPPPPPPPPAPQTNYGSTYSSFPSQATKMTAPGAYFKKAQ STPSNQGAFNGYDAAVYNYAQQTTQSAQNTANHIGATWNNTTGGAAGRNNKQSSGDNN MFYCETCKVSCAGAITYREHLDGKGHKKREECLKTGKHPVSLAKHKLSYRCELCDVTC TGQDTYNAHIKGGKHIKTANLHKKMGKYVPEDVPTIIAPGVDGPIETKAKPKWHQQQI PGTKKVIGINTVQFVGGHKLNSTGQLEEKKRVVALTVGSAGKKEDSGMEPIIVEDEML QAMIVAEEIQPVGAEYVMEDRDATGKLVQFHCKLCDCKFSDPNAKEIHIKGRRHRMSY KQQVDPTLIVDQKPSNKKSDKGAKKGMDYLPMKFKCTVVPPTPKGREMNIVDDRTVDQ KYQSLHPGKEYNDNIDRFLADVKSCFKMVSDKIGEVSGESTSESEVTTAQTPTNGKTN NPRILIGCIRCGPFSKKTYIKADAYADMVLTCTPLPTPELVQRMTDTFREVSTDLTIE SDPTSGVCVIISANYFPELKCRVMITSPSLRSEEDSEGAKSEFPEKAMCLNALAMIRS TKWYEQLELLVSNVIDSTPSVLNPAEAFKRVIEAISSGYLHSAILNDPCESTSINVLD ALSDEQKHSLTCSAQSFIRKIGFNKIHEVLGIDRLVDVAPGIPTKKRPFDTSSRDVIG EMYDEMLGYDGPVIDPRPPGVGKDFVEEDYAGIDQDDGEPQAKRGKLDDFIEEQKMDT TKEEANLATETVELMSTEEEERNVADPVNPDKSEAAEPMEEFV" gene <477950..>480636 /locus_tag="CRE_20723" /db_xref="WormBase:WBGene00060965" mRNA join(<477950..478099,478147..478206,478451..478511, 478981..479122,479202..479480,479538..479837, 479883..480065,480128..480272,480321..480449, 480496..>480636) /locus_tag="CRE_20723" /product="hypothetical protein" /db_xref="WormBase:CRE20723" /db_xref="WormBase:WBGene00060965" CDS join(477950..478099,478147..478206,478451..478511, 478981..479122,479202..479480,479538..479837, 479883..480065,480128..480272,480321..480449, 480496..480636) /locus_tag="CRE_20723" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related); coded for by the following C. remanei cDNAs: DY524621" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01044.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE20723" /db_xref="WormBase:WBGene00060965" /translation="MWGKITSHIGVWLGLEEAERPMRASCSLSMIHHPQLTAVRNSKS SENLHRITTMSPQRIQDVEGSPSTRKTSSIFTLRRSRNKEKKYKNNGSNKSPLSKNGT EMTQSWHSNNVNGTSSGSGSGSTPEHHNKNIFSFLSRQSRSRSNNPSESLSTVTHKTS PSTMPPPPTSNTVADFTHLRKRRPRSAHYDPNTITLPAKEEVTPQDVNDLYKRIDKLG EGSYATVYKCESKLDGSIVALKEIKLQFQEGLPFTAIREASLLRNLRHANIVSLHDIF YQHHQLTFVFEYMKMDLSKYLEQNVYGLDSIDIKLLLFQLLRGLDFCHRKKILHRDLK PQNLLLDEDGVLKLADFGLARAKSVPSRTYSHEVVTLWYRPPDVLMGSTDYSTSLDMW GVGCIFAEICTGTALFPGSKDSHYPGTKDQLDMIFSIRGTPDEKKWPEVKNLPSYNPE IFPRYRELSFIAVNPMFTKILKTGQELLGMLLQLRPESRVSAASAMLHPYFASFPREI HLLAPSQSIFRLRELRDLRSL" gene complement(<480893..>483550) /locus_tag="CRE_20799" /db_xref="WormBase:WBGene00060966" mRNA complement(join(<480893..480925,480983..481345, 481396..482031,482091..482503,482557..483144, 483224..483391,483439..>483550)) /locus_tag="CRE_20799" /product="hypothetical protein" /db_xref="WormBase:CRE20799" /db_xref="WormBase:WBGene00060966" CDS complement(join(480893..480925,480983..481345, 481396..482031,482091..482503,482557..483144, 483224..483391,483439..483550)) /locus_tag="CRE_20799" /note="contains similarity to Mus musculus Sperm mitochondrial-associated cysteine-rich protein.; SW:P15265; coded for by the following C. remanei cDNAs: DR777245" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01032.1" /db_xref="WormBase:CRE20799" /db_xref="WormBase:WBGene00060966" /translation="MHWSSWAIALNVIVLCIADEAPEGFPEDHVDLVFPMKMKYDSHL RQHDLPPHFIGVNETNLIPLTLRMETRRKRCSCGCSGCDLFPNRSCCSSSCCSSQKPI PLACCPPPPPPKPCCQPAFGPCCPATPNCCPKPCCRGRRPEYEEYEDEEGNPGGVPAP PNPPRTCCPPPTPAAPPPPPPPPPPAPEAPTQCCPSSPYGRTPCRSGCPNGDCGCGRP CCYYQNPTCCNQGQKACCPPEQPCCPELKLDTGCLSMIPPCLRSCPSCPCRKRLMLGK RTKRAAPGLHCQSLGLLGQQSPPTLISQPTKTIVKSRVKAAGTKTSTVTATKKLIEQS SDHVESPPTAGRLYDFRRAHVRVKRNLGGEGGCQLCLNGTPLKRTKRSFDCVPCTYLQ PQYSDWNPFLGDQRPRGSQSPVGTPIAGHRTKRAGCLPHPQCTVHVRRYKRNLIGSQY CEPCNGHYGRKKREAERDQCLRREKRYADEQCDNDEFSVNERSKRQAYNPKGILDIVK LLSKASSGGNNPGGCMKFPACVLAQKKRRKRNADRLDKYYQAVEEHKKQVEEYEKALE EHKRVKRQFFAPDNSAACVPCPAWVTLALASRKKRDVDGKEVDDHEDKKQMTISEAIA DIRSKKGYKEGFDADDDDSSEETIETRRKQRRSCQQSDDCLNNVEYAVFQKVYAEKRT KREAVFRRKKCSRCGVSGLTPHRVKRNFGQPNINVSEQNCMAFPQCRHRVKRNFLGED CNICTQDTGLKRRKRNMGTAQCYPCPGTRA" gene complement(<485305..>506676) /locus_tag="CRE_20800" /db_xref="WormBase:WBGene00060967" mRNA complement(join(<485305..485415,485469..485558, 485613..485859,485915..486925,486973..487655, 488007..488121,488847..489541,490153..490374, 491887..492039,492098..492284,494733..494928, 496670..496726,501727..501937,505156..505695, 505741..505979,506592..>506676)) /locus_tag="CRE_20800" /product="hypothetical protein" /db_xref="WormBase:CRE20800" /db_xref="WormBase:WBGene00060967" CDS complement(join(485305..485415,485469..485558, 485613..485859,485915..486925,486973..487655, 488007..488121,488847..489541,490153..490374, 491887..492039,492098..492284,494733..494928, 496670..496726,501727..501937,505156..505695, 505741..505979,506592..506676)) /locus_tag="CRE_20800" /note="contains similarity to Pfam domains PF00046 (Homeobox domain) (3), PF00096 (Zinc finger, C2H2 type) (6)contains similarity to Interpro domains IPR003604 (Zinc finger, U1-type), IPR012287 (Homeodomain-related), IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR001356 (Homeobox), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01013.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR003604" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00046" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE20800" /db_xref="WormBase:WBGene00060967" /translation="MDVALLTMDDTKPTTTTSNQNGSSGGNRANESAKCHLERILAAT GFDEQSLVNGNFPFDASSLGFADLSPFSSLRNSSKTLKCPKCNWHYKYQETLEIHMKE KHSDADVKCIFCVENQPHPKLARGETYSCGYKPYRCDLCRYSTTTKGNLSIHMQSDKH LHAVQELPNSIGECDELGVIMSMTLINSFNAFFSEFAANFACGAPVSRSSPIEESDGS LICLICGIYATESIPEMLDHVEKDRSRTYQGDVTVMNGNFRCYLCPYQTTLKANFQLH TRTDKHLQKVQTANHIREGARPHTAIYRLSSTKTSVQVLCRQCQEVIPSSESLREHRH FLSTKQLWRCKLCNQEFDSVTQAIDFKLMEDAAYACAGCDFTTKDVSDFEEHAKAHEE EASSGGEGASSQKACALCLEPTEDLEKHLVEQHRIAESAIEKFLLTERTAKEASCSTS TTSDPSSSEFPHRCSKCSMAFRSESQLQTHSLKHVFNSFHKCPTCGDSFDENSIVTHM LEHTKEECEMCSETFPSKESFLSHLNSARHLQQAKKQLETSKVDLNSQDPSSSEKQRI YVCNVCKQSYPQAANLDVHMRSMTHQSRMSRLAELVANGDVDGDKTVFEQPGIPAPTI QSYIETTANQVSMNDLMSLLSRSESDEMREEVNGLQVLTQIKVYGEPKITNLVPGLEG KVDNIALFDDQQAAEISKIDCGACGQQISGILALNLHYEESHSSKIPSEVLKKFGERI LSAVEEKLSRENSVRNDGSQSPQSDDEPMEKKIKLENMLPDMDKNAAANQFAMFQQMM NCLPFMAPPGSAGFGGFSPEMLSQLMNPAAAAAAAAAAAANAANNSPAKRARTRITDD QLKVLRQYFNINNSPSESQIKEMSHKSGLPEKVIKHWFRNTLFKMIIYWKPKKSITFQ ERQRDKDSPYNFSNPPQMGIDLDMYEKTGETKVHSLNNDNAPKSELSSARATPTIPTP TPLPLVVEEKKVSVSEPKSASSSASSSQLNLQAMLSQMQNNVNFFDATSFMAAATNPM TPSTPSSCNTTSSGRRANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLSPRV IVVWFQNARQKARKIYENQPNHENSDRFVRTPGSNFQCKRCNQVFQRYYELIQHQQKK CYKDDGAALASDNKSVEESLTEEEKAQLLAQQQITQLASSLEMPKFQPADLLKMIGAS SSGASTSDVLMKMCENISGSGFHKTCLFCNQEFRDKAVMTEHMNQKHPQHMLLPNFDL DLMPDAGAELLMDFKESALDLSGSSVDYRDSISTSPPRSEDDVLTEALDDSTFAALGI PLNIPGGHPGSGSECRSPASNKRFRTHLTPMQVQMMKSVFNEYKTPSMAECELLGKEV GLHKRVVQVWFQNARAKERKTRGAVDEDSRSGELHCEQCDKTFGTRLALQDHLFTSEH IGILRNQLKLEGVSELTTASVTECSPEKKTKSSNQLDLASLPFFNPLIDIQIYGTPIQ FLQVPEDIKKQIADDIAAGKSRTVFSQDGLPLEQLKEALPENEKSSLSTVQKDVGWAC PGCTFVFQEEKKLRDHQKSMCPCDKTLTLVQTHYSCKSCKSDFCLQSEYIFHLSMPPH TSP" gene complement(<526351..>531531) /gene="Cre-mig-1" /locus_tag="CRE_20801" /db_xref="WormBase:WBGene00060969" mRNA complement(join(<526351..526471,526744..527198, 527285..527461,527532..527652,527704..527795, 527916..528050,528226..528438,528495..528636, 531038..>531531)) /gene="Cre-mig-1" /locus_tag="CRE_20801" /product="CRE-MIG-1 protein" /db_xref="WormBase:WBGene00060969" CDS complement(join(526351..526471,526744..527198, 527285..527461,527532..527652,527704..527795, 527916..528050,528226..528438,528495..528636, 531038..531531)) /gene="Cre-mig-1" /locus_tag="CRE_20801" /note="contains similarity to Pfam domain PF01392 Fz domain; contains similarity to Interpro domains IPR000024 (Frizzled cysteine-rich domain), IPR000832 (GPCR, family 2, secretin-like), IPR015526 (Frizzled related); coded for by the following C. remanei cDNAs: DR780376" /codon_start=1 /product="CRE-MIG-1 protein" /protein_id="EFP00935.1" /db_xref="InterPro:IPR000024" /db_xref="InterPro:IPR000832" /db_xref="InterPro:IPR015526" /db_xref="PFAM:PF01392" /db_xref="WormBase:CRE20801" /db_xref="WormBase:WBGene00060969" /translation="MLPFLSIFITGRHKNFSLSFYFSRWSANRPTDRKKRTQALNFSF SLYHAYKYLITEGPPPTTKLRPHFGSFVNEERRRDGCHWWYLEREGVPSSSSFPSLLL LLIISLFTTKPIGPLTNPFHYHIMGPSFRGFLVLLLGVLGVGAQRCQRVDHEMCAELP YNLTSFPNLVGEESFKDASESILTYKPLLSVVCSGQLKFFLCSVYFPMCNEKLAHPIG PCRPLCLSVQEKCLPVLESFGFSWPEVIRCDKFPLENNREKMCMKGPNEQGAIQDERA KYAAAERENNDDEEDKRREADRLNGKCPQDEVFLNRSSKCVPLCSNPQKVGQTDRESA TRLLLFLSLSSVILTILSVFIVGLSIYFRRLELLHSLPETAMFFSCIAFCVTSTIYII SVSFKDQFQISCTDYTHHLLFVVGGLSHVPCSSVASLIYYSATCSRLWWLLICFSWNK ATRTANLLDESRTRVIMLILGIPLAPLMLALLAKAVAANPLTGLCFIGQASAGTDWIF NFCRELILFLISSIALSSACCRLLGSDDQEVNGFAGVIAAIYPIVALFYMLFFINDAT QPNLALDRSFNAVSATKFSFDMLLSFIMCAFCLVYLLFKIARSSSKVSKEGYQPAVPK LPQPAIPGSVRSNTYASTFRTNNMI" gene <536450..>538239 /locus_tag="CRE_20724" /db_xref="WormBase:WBGene00060970" mRNA join(<536450..536563,536616..536798,536849..537103, 537154..537232,537299..537433,537484..538053, 538181..>538239) /locus_tag="CRE_20724" /product="hypothetical protein" /db_xref="WormBase:CRE20724" /db_xref="WormBase:WBGene00060970" CDS join(536450..536563,536616..536798,536849..537103, 537154..537232,537299..537433,537484..538053, 538181..538239) /locus_tag="CRE_20724" /note="contains similarity to Homo sapiens 36 kDa protein; VG:OTTHUMP00000024469" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00980.1" /db_xref="WormBase:CRE20724" /db_xref="WormBase:WBGene00060970" /translation="MKEEVPRDHHNITSLIYPDHNMRCHSTNDDDRLNKDVKFGVLRI FWGEMELPFTEEIELRAVKRSVEMKTFMSWEFRLGPPEDQKVLVSVPAHLFWRMLRTK KEELKMYPATFMFQLAQEGMEHLKTSIPDVYESVKKYHKERRKPLSELLFVVLDPANI QFFELGLLLYRGAYEVLIRQFHKVFDKHWADHNKWCMTRYPDPRVVYAPIEEVSGDDF SHLTKRFGLRNYDTRESADGIRYTVRTYLPRKEVKKKYKKGAHMKKTMNQREDGGVER REDAGGHDQEEILGNRQMSFDRKIVYPENLTDFFEEMRRKKQMQNRKNRLLKEIEDRI VKVKEPKIVVEVEEELIEVKEEPKDEAMEGPEEKTVEEDVSEEVELDFGMEEEEEEEE EEIEEADDGSFETDAPTTSTRSAKSRQVRRRAPGSAAPSTSLTLDNRPRRQRNEPTEI YKATPIKMRTSKRR" gene complement(<538681..>542140) /gene="Cre-cutl-20" /locus_tag="CRE_20802" /db_xref="WormBase:WBGene00060971" mRNA complement(join(<538681..538999,539318..539400, 540177..540299,540351..540437,540637..540718, 540780..540842,540941..541026,541093..541218, 542054..>542140)) /gene="Cre-cutl-20" /locus_tag="CRE_20802" /product="CRE-CUTL-20 protein" /db_xref="WormBase:WBGene00060971" CDS complement(join(538681..538999,539318..539400, 540177..540299,540351..540437,540637..540718, 540780..540842,540941..541026,541093..541218, 542054..542140)) /gene="Cre-cutl-20" /locus_tag="CRE_20802" /note="contains similarity to Pfam domain PF00100 Zona pellucida-like domain; contains similarity to Interpro domain IPR001507 (Endoglin/CD105 antigen)" /codon_start=1 /product="CRE-CUTL-20 protein" /protein_id="EFP01016.1" /db_xref="InterPro:IPR001507" /db_xref="PFAM:PF00100" /db_xref="WormBase:CRE20802" /db_xref="WormBase:WBGene00060971" /translation="MILLWIIGWAVLPFIQSVAIVDTSIACDKTDFLLKIKFDEVFHG TIQSRSGHPKCIYANGTLQPDTKYQLKIPLKGCSTKENGEGNLENEIEVVMGSNNDFN VETDKRFLLTCIPAAPVPKESQVTVSFGGITINSDATTASSILNNQTVDYRVRVLDGA SLDAKQLQRPLAVGDKVTYTVEMKDDQNGRIGRCWANDGISELPLSDSQGCSLQTSGE VWGDFEVSRRDGKTIFYNHIKAWAFPTSNEVNIFCNLHVCVTCSQPSCRGRERRHHPE TPVSDPFSSSIDVSDISPPIAVRTSFRLKRENQARLETSPTSSSASSSSNSSPSANHV FLVPLLLIVASGVFSLF" gene complement(<542745..>544642) /gene="Cre-shc-1" /locus_tag="CRE_20803" /db_xref="WormBase:WBGene00060972" mRNA complement(join(<542745..542921,543203..543293, 543361..543854,544036..544108,544155..544225, 544577..>544642)) /gene="Cre-shc-1" /locus_tag="CRE_20803" /product="CRE-SHC-1 protein" /db_xref="WormBase:WBGene00060972" CDS complement(join(542745..542921,543203..543293, 543361..543854,544036..544108,544155..544225, 544577..544642)) /gene="Cre-shc-1" /locus_tag="CRE_20803" /note="contains similarity to Pfam domains PF00017 (SH2 domain), PF00640 (Phosphotyrosine interaction domain (PTB/PID)); contains similarity to Interpro domains IPR011993 (Pleckstrin homology-type), IPR006020 (Phosphotyrosine interaction region), IPR006019 (Phosphotyrosine interaction (PID or PI)), IPR000980 (SH2 motif)" /codon_start=1 /product="CRE-SHC-1 protein" /protein_id="EFP00975.1" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR006019" /db_xref="InterPro:IPR006020" /db_xref="InterPro:IPR011993" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF00640" /db_xref="WormBase:CRE20803" /db_xref="WormBase:WBGene00060972" /translation="MPDVDPRFSQELRSSGVTLAAVYLGSVPVIESMNSVVSQMRSQV VAECIQHVAATVGQCEAQEINPIVGRIIGEVKEENYVVDLNISSKMVKVIKKNRLIQR HPITYFSFGCRGRGENSNMFGYIAKNKDGTDRRCHVLSSKDAQKLVDTLIAAINVSMT DTRGTPSTSSTPSDDGFVKPEVPAEGRIVNLVRQSPVGSHRQVSDDVVGKVWFHGHLS RDDAQSLLTTAGDFLVRQSDHTSGKFVLSGLTTDGDHKHLILLDHQMRVRTRDHEFNN ITELIDYHMTNGIAVRTERNAKGETSIMLLRPVPAPAEVPPSPESPN" gene complement(<547720..>548862) /gene="Cre-col-46" /locus_tag="CRE_20804" /db_xref="WormBase:WBGene00060973" mRNA complement(join(<547720..547791,547889..548248, 548337..548648,548701..>548862)) /gene="Cre-col-46" /locus_tag="CRE_20804" /product="CRE-COL-46 protein" /db_xref="WormBase:WBGene00060973" CDS complement(join(547720..547791,547889..548248, 548337..548648,548701..548862)) /gene="Cre-col-46" /locus_tag="CRE_20804" /note="contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies); contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-COL-46 protein" /protein_id="EFP01003.1" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR008161" /db_xref="PFAM:PF01391" /db_xref="WormBase:CRE20804" /db_xref="WormBase:WBGene00060973" /translation="MNENARETAYASIIIVSLFISLSTMSSFLISVHPLASILRPSIQ NTVNDATYCQESAFEIKGMLSDIGSQFQNITRQKRDEVDDFLRETGQSAHERVCECRH PQGPPGLSGRDGLPGPKGSEGAPGLPARLPCEPPVDYKSLCADPCPRGIQGTTGITGI KGDTGKTGIPGKNGIRGENGKMGQKGPIGPQGISGLDGEMGDPGADATPKPFIPGPAG PIGEEGEFGPPGPSGMPGIDGPMGAQGPRGKKGKPGFPGNDGAAGAEGLIGERGEEGN RGVCPTYCATDGGVFFVQPPDWMLQ" gene <549348..>550386 /gene="Cre-col-47" /locus_tag="CRE_20725" /db_xref="WormBase:WBGene00060974" mRNA join(<549348..549535,549614..549705,549754..549828, 549877..550262,550306..>550386) /gene="Cre-col-47" /locus_tag="CRE_20725" /product="CRE-COL-47 protein" /db_xref="WormBase:WBGene00060974" CDS join(549348..549535,549614..549705,549754..549828, 549877..550262,550306..550386) /gene="Cre-col-47" /locus_tag="CRE_20725" /note="contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies); contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-COL-47 protein" /protein_id="EFP01017.1" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR008161" /db_xref="PFAM:PF01391" /db_xref="WormBase:CRE20725" /db_xref="WormBase:WBGene00060974" /translation="MKMLMFSVSCPLVFLIYHFFQILHEISSMDDGFIYANEEYKSRM KNLTKELAELELNKRREKRGYSSHPSICSCSISVWQKCPIGKKGATGEPGLDGLPGTN GINGMDGDNGHSNMNINMSPTGCIRCPAGPPGSPGDLGSPGEPGFPGQPGAPGPDGAD TIGPVGPPGLPGHSGIDGGPGEPGMDGMDTVRIISAPGKQGRRGDEGCRGSKGSPGAV GKAGEPGKVGESGESGLKGIDGRSGAPGKIGSPGLPGKDGTYCRCPERNRYDILN" gene <559608..>562755 /locus_tag="CRE_20726" /db_xref="WormBase:WBGene00060975" mRNA join(<559608..559652,559785..560001,560417..560619, 560721..560956,561016..561115,561164..561574, 561648..561833,561887..561995,562320..562521, 562620..>562755) /locus_tag="CRE_20726" /product="hypothetical protein" /db_xref="WormBase:CRE20726" /db_xref="WormBase:WBGene00060975" CDS join(559608..559652,559785..560001,560417..560619, 560721..560956,561016..561115,561164..561574, 561648..561833,561887..561995,562320..562521, 562620..562755) /locus_tag="CRE_20726" /note="contains similarity to Pfam domains PF00621 (RhoGEF domain), PF00169 (PH domain); contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type), IPR015721 (Rho GTP exchange factor)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00949.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR015721" /db_xref="PFAM:PF00169" /db_xref="PFAM:PF00621" /db_xref="WormBase:CRE20726" /db_xref="WormBase:WBGene00060975" /translation="MVDLQLFTPLIRYSEPEEGEPQTIHPNKEQLSRRHAIIPDQPSE NQETSSQGCCSSDNVIIVPHVQISPNESHLFNRAISSGGGLLADLQRATIASQAFYAE ASEPQKNRSPWILKRLYEWSGRAKRREIIKHVQAALETSKDHEIEDDELEKLLPVSYE EMFLGDETSTLPPAKQKYLQAVWELFHTELVFLYRQLFVLRDVYKEPLKRCQVEGCLL LVEPDLLFGNLDQLCRISRTFCQSFLSLLSTVDKEVWDCTQLVVDLFEKFSKGPSTIS AYQAYCINYKATMEYLGSIRQKEERFTEFERICLADERCFRLQLEDLLIAPLQRITRL PILLREIHKRSEDEESKGKVEKVIDTMTESLRSIDDSVQWLHNFERLQQLQTQVVWPN ISELEPKSYIPDFLRVALSRQFCENLLAHPRRKLIHEGPLELVENGRTVDMYAFLFND MFVLTKTKKCASKLKVKGVPLGKSEHYIVQRQPVPLDSCVFCDADSNDQATPMSLKFA FVIIHLTRYYQVVGIYTLQAADKADKELWIEKFQESIENYESIQLKDMLKCTPLFSSL SLRRCSSSRLMSKSEPNSPQLPKEDGKEKKEKEEKKECCSSSTCNQNQ" gene <565755..>573237 /gene="Cre-nas-30" /locus_tag="CRE_20727" /db_xref="WormBase:WBGene00060977" mRNA join(<565755..565802,566392..566478,566919..566990, 567074..567206,567963..568270,568339..568500, 568549..568661,568735..568968,569053..569119, 569219..569422,569474..569600,570554..570682, 570732..570817,570863..570987,571035..571144, 571157..571414,571948..572088,572210..572349, 572406..572562,572607..572768,572862..572958, 573075..>573237) /gene="Cre-nas-30" /locus_tag="CRE_20727" /product="CRE-NAS-30 protein" /db_xref="WormBase:WBGene00060977" CDS join(565755..565802,566392..566478,566919..566990, 567074..567206,567963..568270,568339..568500, 568549..568661,568735..568968,569053..569119, 569219..569422,569474..569600,570554..570682, 570732..570817,570863..570987,571035..571144, 571157..571414,571948..572088,572210..572349, 572406..572562,572607..572768,572862..572958, 573075..573237) /gene="Cre-nas-30" /locus_tag="CRE_20727" /note="contains similarity to Pfam domain PF01400 Astacin (Peptidase family M12A); contains similarity to Interpro domains IPR002345 (Lipocalin), IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidases), IPR000859 (CUB), IPR013032 (EGF-like region, conserved site); coded for by the following C. remanei cDNAs: DY525662" /codon_start=1 /product="CRE-NAS-30 protein" /protein_id="EFP01039.1" /db_xref="InterPro:IPR000859" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR002345" /db_xref="InterPro:IPR006025" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR013032" /db_xref="PFAM:PF01400" /db_xref="WormBase:CRE20727" /db_xref="WormBase:WBGene00060977" /translation="MKTLWIFVLLVVGLIEAQDFMSLFKPFLGGGGGGGNPFANPQAI GGLFQQFAGGQGGGGFGQFLGAMAPKPPPAPAAGPAAVAPTNEDYNTDLDAVPAPPKP KARAAHHRRPQADAPPPPQQSFRQPRTKQEKIERWKNIARTFSPFYFADQNTTPAPQF NNYIWQQNAPAVTPEPFTFAPFSLATLATVAPIGPTLEPMLPTTASPQLLAHNTARMI REIATFSDGGKSRDQDFGAVQTLMQAFFEAVASGNNGGSAAATGAAVGTPLGDAPMYQ ARRDGTELGANRALTNKLFESDMVLTVPQMKAVVLAAQEARNPHGRKKRKVITGSVYR WKSVIPYRFKGGDSKWKKLIKEGLSLWEKETCVRWSENGHGKDYVIFFRGSGCYSSVG RTGGSQLISIGYGCEDKGIVAHEVGHSLGFWHEQSRPDRDQYIHLRKEWIIKGTDGNF EKRSWEEIEDMGVPYDIGSVMHYGSNAFTKDWDQITIETTDSRYQGTIGQRQKLSFID VKQVNRLYCNSVCPVALSCQHGGYPDPNNCSVCKCPDGLGGKLCGRVAKGTDHDKCGG ELVATPEWQEMIYKGKRTCNWRVKSPNGGRVRLVLTELRYQCATSCKAYIEIKHNTDF QQTGFRVCCFNKTYDVISDQSEALILSNANIVDYEVSYKLQWIQEITDNESLKQYFPD NGKPLPPPKPTSTWVPGKENRPFRGVENTGGTIEKFILQAIPKIRDSHRPLESITSIV AEYGLATLLGISHNDTTSPVDIIITVSDQLLSFHFIRSSSTSQVMILICFYLLSLLNL ANSMSATVRPFTNSIPVPGRNVPIMRLFENYAASCRPTNKRDFNMDQLATLLQSFQMD EVATKQYNSIFFGMADMQIEKFMGKWYTVVDSKEVHKEDCSIFYFDMVLQTPYTATFT SKQYALVNNDVITHEGYGSMVGPEPGAVLITTGHERDQCPFFPVRIGGLNDDGEYQYM ILSTPLKYPTMVWTRDLELFETKWKHEVYDFVEKNGFMSPMAALNTRLHFTDTDVCRK VNKLYENGNI" gene complement(565834..565915) /locus_tag="CRE_32072" /db_xref="WormBase:WBGene00186480" tRNA complement(565834..565915) /locus_tag="CRE_32072" /product="tRNA-Leu" /db_xref="WormBase:CRE32072" /db_xref="WormBase:WBGene00186480" gene complement(569628..569699) /locus_tag="CRE_32455" /db_xref="WormBase:WBGene00186863" tRNA complement(569628..569699) /locus_tag="CRE_32455" /product="tRNA-Trp" /db_xref="WormBase:CRE32455" /db_xref="WormBase:WBGene00186863" gene <573702..>575119 /locus_tag="CRE_20728" /db_xref="WormBase:WBGene00060979" mRNA join(<573702..573823,573902..574325,574365..574448, 574496..574569,574618..>575119) /locus_tag="CRE_20728" /product="hypothetical protein" /db_xref="WormBase:CRE20728" /db_xref="WormBase:WBGene00060979" CDS join(573702..573823,573902..574325,574365..574448, 574496..574569,574618..575119) /locus_tag="CRE_20728" /note="contains similarity to Pfam domain PF00657 GDSL-like Lipase/Acylhydrolase; contains similarity to Interpro domain IPR001087 (Lipase, GDSL)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00948.1" /db_xref="InterPro:IPR001087" /db_xref="PFAM:PF00657" /db_xref="WormBase:CRE20728" /db_xref="WormBase:WBGene00060979" /translation="MVTARFSSATVFLVLIVGTALSALPDLGYPGWQCDASLYQKSKK VPTSAHSVRFADIKVIGALGDSLTAANGAGAPKGDPLAVILQYRGLAFQCGGDNTLDE HVTVASKTNPVLYRFLFIISSDVLKKFSPNLMGYSTGIGSANVWEVSKLNQAVPGAEA SDIITQARALVQIIQSHKEVNWIDYKNDWKLVNVFIGANDMCAYCNDGENGGHSKANW KQNVITAIQILKNNLPRTIVSMTGMFDMRMLREIDHDKYFCDGLHTFECPCEKNKAFT NDDISAACHRYMDAQLEIQSSGIFDSTDDFTFVVQPFFNGIVTPPLKPDGDVNLDWFA PDCFHFSKLGHANVAKHLWNNIVQPVGSKNTIVNLSDPTIPLNCPDASCPFFRTTKNS VDCSKYMTA" gene complement(<575576..>576306) /gene="Cre-ceh-9" /locus_tag="CRE_20805" /db_xref="WormBase:WBGene00060980" mRNA complement(join(<575576..575692,575838..576037, 576153..>576306)) /gene="Cre-ceh-9" /locus_tag="CRE_20805" /product="CRE-CEH-9 protein" /db_xref="WormBase:WBGene00060980" CDS complement(join(575576..575692,575838..576037, 576153..576306)) /gene="Cre-ceh-9" /locus_tag="CRE_20805" /note="contains similarity to Pfam domain PF00046 Homeobox domain; contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR000047 (Helix-turn-helix motif, lambda-like repressor), IPR001356 (Homeobox)" /codon_start=1 /product="CRE-CEH-9 protein" /protein_id="EFP00931.1" /db_xref="InterPro:IPR000047" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="PFAM:PF00046" /db_xref="WormBase:CRE20805" /db_xref="WormBase:WBGene00060980" /translation="METEMLLQILQPYLALLTPDLGKTPRKTSHLIKDILDLPTSNGE IDEFGRCKKSLEKEQERSGSISSEKSMRNKKKKARTTFSGKQVFELEKQFEAKKYLSS SDRSELARRLDVTETQVKIWFQNRRTKWKKIESEKERIASEVIPEDQLVKPTSE" gene complement(<578934..>582234) /gene="Cre-grl-16" /locus_tag="CRE_20806" /db_xref="WormBase:WBGene00060981" mRNA complement(join(<578934..579101,579713..579817, 580038..580501,580613..581190,582098..>582234)) /gene="Cre-grl-16" /locus_tag="CRE_20806" /product="CRE-GRL-16 protein" /db_xref="WormBase:WBGene00060981" CDS complement(join(578934..579101,579713..579817, 580038..580501,580613..581190,582098..582234)) /gene="Cre-grl-16" /locus_tag="CRE_20806" /note="contains similarity to Pfam domain PF04155 Ground-like domain; contains similarity to Interpro domain IPR007284 (Ground-like region)" /codon_start=1 /product="CRE-GRL-16 protein" /protein_id="EFP01012.1" /db_xref="InterPro:IPR007284" /db_xref="PFAM:PF04155" /db_xref="WormBase:CRE20806" /db_xref="WormBase:WBGene00060981" /translation="MRVLVAVLLAVSPAWACIGGAGSAGGCCPPSQPSCGAATPPCSS SSYASGGGSYAAAPAALAPPPPPPPPPAPIGGGYAGAGGFGGAAGPIAGGSYNQGPQG FGGQQGGQGGYQSGPAQAIQGGGQQGYAGPVGGAQQSSYAGPAQSGPIGGGQEASYAG SAQSGPIGGGQQSSYAGPAQVAPIAPQQPQGYAGPAQVAPEQPSQQGGYQSGPVSSIQ VTQVSHGGLYQAPPEQPAQQALTFSLFTSHSVVEQVAPVATYTQGPVPTPVEQVVETV VEPAAAPEPEPQAAPEPAPEQQTETVVEEVVPETVVAETEAPAVVEETEAPVVEETEA PVIEETEAPAPVVEETPAPVEQAPVPAAKEESTYDDIVEEQPAVATATEAATEQVDTV EETNEAVEYADEEGDEGNCDDPELRAIVEAALKNEKDNLEAARKIEGDASAKFGGRFN AIVSDAEFAYVNWYGKRNCQLRYENRHSLTWED" gene complement(<586818..>590177) /gene="Cre-ptr-21" /locus_tag="CRE_20807" /db_xref="WormBase:WBGene00060982" mRNA complement(join(<586818..587063,587111..587269, 587374..587598,587664..587850,587899..587972, 588049..588501,588563..588684,588754..589204, 589260..589673,589724..589920,589967..>590177)) /gene="Cre-ptr-21" /locus_tag="CRE_20807" /product="CRE-PTR-21 protein" /db_xref="WormBase:WBGene00060982" CDS complement(join(586818..587063,587111..587269, 587374..587598,587664..587850,587899..587972, 588049..588501,588563..588684,588754..589204, 589260..589673,589724..589920,589967..590177)) /gene="Cre-ptr-21" /locus_tag="CRE_20807" /note="contains similarity to Pfam domain PF02460 Patched family; contains similarity to Interpro domains IPR003392 (Patched), IPR000731 (Sterol-sensing 5TM box)" /codon_start=1 /product="CRE-PTR-21 protein" /protein_id="EFP01043.1" /db_xref="InterPro:IPR000731" /db_xref="InterPro:IPR003392" /db_xref="PFAM:PF02460" /db_xref="WormBase:CRE20807" /db_xref="WormBase:WBGene00060982" /translation="MSSAEGEQFIHRPTVISTASAASRPRHKTFELLGPFSNISLAEM YKVCGKIIGRFPVPFIIATAIMCSAALGAIGLQMKDNVRDGYTPKNSQSRLENKLYRE FLGSEGDPVMTTVLMTAKDGGSMHRIEYLEEAQRQWLYISKNLSVDVGDGQFMKFGDF CGHYCQANDILQYFLSAYKTKSADPTVDGYQLDYPIATVMGYQLHLERNFFGVTTNQS NPVTNIQMMRVLTLPVLSEVKTFEDTDKLNKWELAVYNYATGYSALDGPNHLVEINVI GAEVVDTEMNKDAQKMVPYFIVGIVSMIIFIFITVSISASYYGYFSWRIGLIALACLM VPILAILTAFGINNMLGNRTNSPMMIMPFLINGIGVNDAFLTLQNWLQHSPDLPSGKR LGYMLSEAGPSITTTTLTNVIVFLIGWMNPTEEMSIFCLGCAISLLLAYVYTLTFFCP VLVLLLNERVKEPSKLERSFNKALEFYAKIVCSRWTFLLLMLGVAVYWGFGIYGTLRI QAVLNTAKILPLETPIRKPNRIIEETVWKEFYPVTVIVNNPVDISNPSKLSIFENLVH DFESMEKCRGSEYTISPIRDYQTYFYGVGAEDFDYEDETVKNTSTTFDFSKLTGFLEN PIYKHHKGTMKLNFSNTVPIRKVQLIFAYENVTSWDDRIKIMEDWRHIASSYDTLNVS VWNVNAMFVDQMQSLKGLAISNALVTLGCMAAVCIVFIRNPLSVSLATASILSISIGV TGYLCFWDLDLDPVTLCAVIVSIGMSVDFVAHVACHYQVRYKEFEENGVVKKIEMKTP ESRVVNSLSNVLWPMVQSAFSTLLCVLPLAILQNYLPMVFVKTILLVVIWGMFHGLVL LPCILAQFPLSVFNKTFADLLFGRTSSSSCSSETDSEEDTMAEAQEMTPLSIADKA" gene complement(<600695..>604669) /gene="Cre-wwp-1" /locus_tag="CRE_20808" /db_xref="WormBase:WBGene00060983" mRNA complement(join(<600695..600982,601061..601282, 601388..601648,601702..602022,602068..602275, 602463..602737,603050..603259,603593..603834, 604253..604510,604564..>604669)) /gene="Cre-wwp-1" /locus_tag="CRE_20808" /product="CRE-WWP-1 protein" /db_xref="WormBase:WBGene00060983" CDS complement(join(600695..600982,601061..601282, 601388..601648,601702..602022,602068..602275, 602463..602737,603050..603259,603593..603834, 604253..604510,604564..604669)) /gene="Cre-wwp-1" /locus_tag="CRE_20808" /note="contains similarity to Pfam domains PF00168 (C2 domain), PF00397 (WW domain) (4), PF00632 (HECT-domain (ubiquitin-transferase)); contains similarity to Interpro domains IPR000569 (HECT), IPR001202 (WW/Rsp5/WWP), IPR000008 (C2 calcium-dependent membrane targeting); coded for by the following C. remanei cDNAs: DQ115354" /codon_start=1 /product="CRE-WWP-1 protein" /protein_id="EFP00965.1" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR000569" /db_xref="InterPro:IPR001202" /db_xref="PFAM:PF00168" /db_xref="PFAM:PF00397" /db_xref="PFAM:PF00632" /db_xref="WormBase:CRE20808" /db_xref="WormBase:WBGene00060983" /translation="MARNEPSQQPSSSGSNGTSSASQNGSAKPSKVTVKVVNASFTKP CDCYVEITSDTSSAAPKKTTVKKKTSGPEWNEHLNVHANETSTLSFRLLQKAKLFEDT CLGMAKIKLANVGKTENGEFKADINNISLLAKDSSKMGTLNVIFSGYAERKRRSAGQR AETAVSASSEASTSNGVLPTASASSGGRRPATAKRDTLAVPANGVAGANTSGGGTTTG TTPEEALPEGWEMRFDQYGRKYYVDHTTKSTTWERPSTQPLPQGWEMRRDPRGRVYYV DHNTRTTTWQRPTADMLEAHEQWQSGRDQAMIQWEQRFLLQQNNFSADDPLGPLPEGW EKRQDPNTGRMYFVNHVNRTTQWEDPRTQGGSDQPLPDGWEMRFTEQGVPFFIDHHSK TTTYNDPRTGKPVGPLGVVGVQMAMEKSFRWKIAQFRYLCLSNSVPNHVKITVSRNNV FEDSFQEIMRKNAVDLRRRLYIQFRGEEGLDYGGVAREWFFLLSHEVLNPMYCLFMYA GNNNYSLQINPASFVNPDHLKYFEYIGRFIAMALFHGKFIYSGFTMPFYKKMLNKKIV LKDIEQVDSEIYNSLMWIKDNNIDECDMELYFVADYELLGELKTYELKEGGTDMAVTE ANKLEYIELLVEWRFNRGVEQQTKAFFTGFNSVFPLEWMQYFDERELELLLCGMQDVD VDDWQRNTVYRHYAPQSKQVTWFWQWVRSLDQEKRARLLQFVTGTCRVPVGGFSELMG STGPQLFCIERVGKENWLPRSHTCFNRLDLPPYRSYEQLCEKLSMAIEMTEGFGNE" gene complement(<605363..>606054) /locus_tag="CRE_20809" /db_xref="WormBase:WBGene00060984" mRNA complement(join(<605363..605500,605550..605957, 606007..>606054)) /locus_tag="CRE_20809" /product="hypothetical protein" /db_xref="WormBase:CRE20809" /db_xref="WormBase:WBGene00060984" CDS complement(join(605363..605500,605550..605957, 606007..606054)) /locus_tag="CRE_20809" /note="contains similarity to Pfam domains PF00627 (UBA/TS-N domain), PF01849 (NAC domain); contains similarity to Interpro domains IPR016641 (Nascent polypeptide-associated complex, alpha subunit), IPR002715 (Nascent polypeptide-associated complex NAC), IPR000449 (Ubiquitin-associated/translation elongation factor EF1B, N-terminal); coded for by the following C. remanei cDNAs: DY527075, DR779297, DT935770, DR780378, DT936229, DR777983, DR780519, DR407326, DR778421, DT935711, DY529288, DR775755, DY525462, DY525569, DR777448, DY529642" /codon_start=1 /product="hypothetical protein" /protein_id="EFP01038.1" /db_xref="InterPro:IPR000449" /db_xref="InterPro:IPR002715" /db_xref="InterPro:IPR016641" /db_xref="PFAM:PF00627" /db_xref="PFAM:PF01849" /db_xref="WormBase:CRE20809" /db_xref="WormBase:WBGene00060984" /translation="MTGSTETRNNEKDVKEPQVDSDNDSDNEALEHELTEEQRRVAEA AGLGDHIDKQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKS PGSDTYIIFGEAKIEDLTQHAQMSAIENMKPTREAPQLKTVEEDDNEDLEEDSAGIEE KDIELVISQANTTRNKAIRALKEADNDIVNAIMSLTM" gene complement(<606706..>607442) /locus_tag="CRE_20810" /db_xref="WormBase:WBGene00060985" mRNA complement(join(<606706..607223,607331..>607442)) /locus_tag="CRE_20810" /product="hypothetical protein" /db_xref="WormBase:CRE20810" /db_xref="WormBase:WBGene00060985" CDS complement(join(606706..607223,607331..607442)) /locus_tag="CRE_20810" /note="contains similarity to Pfam domain PF06425 Partner of SLD five, PSF3; contains similarity to Interpro domain IPR010492 (GINS complex, Psf3 component)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00950.1" /db_xref="InterPro:IPR010492" /db_xref="PFAM:PF06425" /db_xref="WormBase:CRE20810" /db_xref="WormBase:WBGene00060985" /translation="MAGLGKQIVESKFFDLDDIIASSESTSCTFEIGELNPDFFQEMV GIVKPTQNAEGYGVDTPLWLLNPDIIKTPVTVRFYESSFKNVISSQIHLPQAYSVNMQ GVLNADARNVNLSRMQQQFYTNGMQLCYLTKKQNPDGALNLARCLLSTVTQRLGGIIS SSANQRTKGDRFDGLEIKVFLEGKRCKDDIDRWLRQDNKSMSKKRKRNS" gene <610798..>611979 /locus_tag="CRE_20729" /db_xref="WormBase:WBGene00060987" mRNA join(<610798..610877,610925..611749,611850..>611979) /locus_tag="CRE_20729" /product="hypothetical protein" /db_xref="WormBase:CRE20729" /db_xref="WormBase:WBGene00060987" CDS join(610798..610877,610925..611749,611850..611979) /locus_tag="CRE_20729" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00956.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE20729" /db_xref="WormBase:WBGene00060987" /translation="MSHRFPLLFVPQLVLTEIIKFLKPAELVTLSLCSKRCRILVKIH RKKSTRVSIQLFNGHVPRVGVCINTNNNSYNVLGSFGGYRFHFESANKEKYKKIENLV ISGHMITCAIDQRTGYSVTFWDDNTQGLKIITDYVCNLFRSTVRTVSIDQYSSWIVDW INKKQKSPINRMIINDHMDDLKKPNLLQVLRSFRGTEKLLIVASPPKLFKFPYKFEKV STLIIKNGFWLTVDNLIDLDCVSMKIKNTNLSSLEINMFLLNWMTGSSRLRCFQIEVT RGNFNEVIKDVEHLIELFEGTRVYKWDNIADIHFHGGYNIRRDDGITATISVGPKLII FAVWPDWQRK" gene <622216..>623712 /locus_tag="CRE_20730" /db_xref="WormBase:WBGene00060988" mRNA join(<622216..622319,622994..623075,623647..>623712) /locus_tag="CRE_20730" /product="hypothetical protein" /db_xref="WormBase:CRE20730" /db_xref="WormBase:WBGene00060988" CDS join(622216..622319,622994..623075,623647..623712) /locus_tag="CRE_20730" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00977.1" /db_xref="WormBase:CRE20730" /db_xref="WormBase:WBGene00060988" /translation="MLPDSPSPRAALALSDLQPQTGASTFSIGSGSGNWSTRGVGGVS GDYMDKSGGGMFGNSRNNIFNQFSASTCFVSTPSLGNNS" gene <624075..>625073 /locus_tag="CRE_20731" /db_xref="WormBase:WBGene00060989" mRNA join(<624075..624195,624280..624767,624840..>625073) /locus_tag="CRE_20731" /product="hypothetical protein" /db_xref="WormBase:CRE20731" /db_xref="WormBase:WBGene00060989" CDS join(624075..624195,624280..624767,624840..625073) /locus_tag="CRE_20731" /note="contains similarity to Pfam domain PF01682 DB module; contains similarity to Interpro domain IPR002602 (Protein of unknown function DB); coded for by the following C. remanei cDNAs: DT933807" /codon_start=1 /product="hypothetical protein" /protein_id="EFP00958.1" /db_xref="InterPro:IPR002602" /db_xref="PFAM:PF01682" /db_xref="WormBase:CRE20731" /db_xref="WormBase:WBGene00060989" /translation="MRSAAGILILISIIPSVYSEPKLPDCEQIPKVLCCTQRVLDKCM SGCIDYVTEKCPHKLEKYETIDDEEPSTTTTHRAPKKQVKAATVSSRVVGQVDHEIKE QFIDSKDIRRAPLAGDAKLLNQEYPITEVTDADLSSECGTEKSNPPFSPCLSRKSADD VFLSCCRQQLPSNCHSLCTYEHREHVAAETLIQAVQQEHCDMKYLTNLLYCANQNRDN RACCSHLGMSNPELGVGDRCLRMCNIAPSGDRVSSVEKEDLVCLSNWNVIMYCARGGL RTIN" gene <631940..>633852 /gene="Cre-acs-13" /locus_tag="CRE_20732" /db_xref="WormBase:WBGene00060990" mRNA join(<631940..631983,632331..632559,632663..633095, 633266..>633852) /gene="Cre-acs-13" /locus_tag="CRE_20732" /product="CRE-ACS-13 protein" /db_xref="WormBase:WBGene00060990" CDS join(631940..631983,632331..632559,632663..633095, 633266..633852) /gene="Cre-acs-13" /locus_tag="CRE_20732" /note="contains similarity to Pfam domain PF00501 AMP-binding enzyme; contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase); coded for by the following C. remanei cDNAs: DR408387, DR407762, DT933381" /codon_start=1 /product="CRE-ACS-13 protein" /protein_id="EFP01041.1" /db_xref="InterPro:IPR000873" /db_xref="PFAM:PF00501" /db_xref="WormBase:CRE20732" /db_xref="WormBase:WBGene00060990" /translation="MVITDTAAWVQSQSRSIVDFISTPTANSSSLPPYVQIGAAAAVT MGLGYYLSKGTSGSSGSAGSYTFNNGVTYTGNVKPLVDPMNQSRVLPDGSRISAYLKD DKLQAFLFEDARTLYQGVRRGARLSNNGPMLGHRVKQSDGSIPYVWETYNQIIERAEN VSVAFRELGIPTGNDENIGIYSKNRPEWIVTEFATYNYSNVIVPIYETLGSEASIFIL NQAEIKIVVCDDIAKATGLLKFKEQCPSLKTLVVMESLTDELKSSASSLGVQVFTFED LEKLGKDAKTRPAHIPPTPEDLATICYTSGTTGTPKGVMLTHANVIADGVCMDFFKHS GIAATDSMISFLPLAHMLERVIESVCFCVGAKVGFYRGDIRVLAEDIKELKPTVVPVV PRVLNRLYDKVMSEVNKSTFKKLLFDFAISYKARDMAK" CONTIG join(AAGD02008914.1:1..6841,gap(155),AAGD02008915.1:1..97249, gap(10),AAGD02008916.1:1..6577,gap(10),AAGD02008917.1:1..1741, gap(10),AAGD02008918.1:1..132153,gap(10),AAGD02008919.1:1..107135, gap(10),AAGD02008920.1:1..8671,gap(232),AAGD02008921.1:1..274038) //