LOCUS DS268435 748538 bp DNA linear CON 11-OCT-2010 DEFINITION Caenorhabditis remanei Scfld02_28 genomic scaffold, whole genome shotgun sequence. ACCESSION DS268435 AAGD02000000 VERSION DS268435.1 DBLINK BioProject: PRJNA12588 BioSample: SAMN00627085 KEYWORDS WGS. SOURCE Caenorhabditis remanei ORGANISM Caenorhabditis remanei Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 748538) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE PCAP assembly of the Caenorhabditis remanei genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 748538) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (17-JUL-2007) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA COMMENT The organism is Caenorhabditis remanei Sudhaus, 1974; strain PB4641. This strain is derived from the wild isolate EM464. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain EM464 was established with individuals collected from a pillbug (Armadillidium vulgare) in Brooklyn, New York, NY, USA in June 1990 by Scott Baird. EM464 was described as /Caenorhabditis vulgaris/Baird, Fitch & Emmons, 1994, which was later shown to be a junior synonym of C. remanei (Sudhaus & Kiontke 1996). Annotation was added to the scaffolds in October 2010. FEATURES Location/Qualifiers source 1..748538 /organism="Caenorhabditis remanei" /mol_type="genomic DNA" /strain="PB4641" /db_xref="taxon:31234" gene complement(<331..>624) /locus_tag="CRE_20276" /db_xref="WormBase:WBGene00061626" mRNA complement(<331..>624) /locus_tag="CRE_20276" /product="hypothetical protein" /db_xref="WormBase:CRE20276" /db_xref="WormBase:WBGene00061626" CDS complement(331..624) /locus_tag="CRE_20276" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98613.1" /db_xref="WormBase:CRE20276" /db_xref="WormBase:WBGene00061626" /translation="MFVSFFFFFFLLPSQFFHPSRHRTFRFLVNHSYCLFSVISTFLY SHCLIDNMGNVATRKRPGCHHDVRNEENEEEDGPARKKLRIGETRTENEYQKV" gene complement(<2059..>3375) /gene="Cre-rfc-4" /locus_tag="CRE_20277" /db_xref="WormBase:WBGene00061627" mRNA complement(join(<2059..2418,2465..2597,2643..3002, 3050..3144,3189..3267,3314..>3375)) /gene="Cre-rfc-4" /locus_tag="CRE_20277" /product="CRE-RFC-4 protein" /db_xref="WormBase:WBGene00061627" CDS complement(join(2059..2418,2465..2597,2643..3002, 3050..3144,3189..3267,3314..3375)) /gene="Cre-rfc-4" /locus_tag="CRE_20277" /note="contains similarity to Pfam domain PF00004 ATPase family associated with various cellular activities (AAA); contains similarity to Interpro domains IPR003959 (AAA ATPase, core), IPR003593 (AAA+ ATPase, core)" /codon_start=1 /product="CRE-RFC-4 protein" /protein_id="EFO98477.1" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="PFAM:PF00004" /db_xref="WormBase:CRE20277" /db_xref="WormBase:WBGene00061627" /translation="MAEQIQVDNKKSKVLTWTEKYRPKTLDDIAHQDEVVTMLKGALQ GKDLPHLLFYGPPGTGKTSTALAFCRQLFPRNIFQDRVLDLNASDERGISVVRQKVSR FIVLLSNHSLQIQSFSKTTLSTNCKEDVLKLKIIILDEVDAMTREAQAAMRRVIEDFS KTTRFILICNYVSRLIPPVVSRCAKFRFKSLPSEVQVQRLRTICDAEETPMSNDELMQ VMEYSEGDLRRAVCTLQSLAPILRSGDENARNCYLRGSSDSALISNLCKSVRVSNVPQ IISLTKSITKSCTGVAFMRHCFQQMLQENIINDENIAVMGKLVAVSFCPEARVNFTIQ TCEKRILDGCDLENNLLNFLLTLRETIQ" gene <3809..>5438 /locus_tag="CRE_20182" /db_xref="WormBase:WBGene00061628" mRNA join(<3809..4048,4096..4264,4311..5131,5181..>5438) /locus_tag="CRE_20182" /product="hypothetical protein" /db_xref="WormBase:CRE20182" /db_xref="WormBase:WBGene00061628" CDS join(3809..4048,4096..4264,4311..5131,5181..5438) /locus_tag="CRE_20182" /note="contains similarity to Pfam domains PF03143 (Elongation factor Tu C-terminal domain), PF03144 (Elongation factor Tu domain 2), PF00009 (Elongation factor Tu GTP binding domain); contains similarity to Interpro domains IPR000795 (Protein synthesis factor, GTP-binding), IPR004160 (Translation elongation factor EFTu/EF1A, C-terminal), IPR004161 (Translation elongation factor EFTu/EF1A, domain 2), IPR004539 (Translation elongation factor EF1A, eukaryotic and archaeal); coded for by the following C. remanei cDNAs: DT933686, DY527741, DR407404, DR777189, DY529608, DY525138, DR779166, DT935950, DY527037, DR781278, DY526712, DR778426, DR777282, DR781801, DY528095, DT935997, DY526456, DR780719, DY526063, DR776688, DY525948, DT934451, DT935616, DY524989, DR776884, DT936353, DT937390, DR780459, DT933653, DY528829, DY529153, DY526182, DR782005, DY526400, DT933557, DR408055, DR408559, DY525035, DR409676, DY525818, DT935135, DR775694, DY525335, DY529599, DR780820, DR408135, DR408594, DY529487, DR780761, DY527032, DY525472, DT937260, DR776218, DT937333, DR779622, DR409161, DY527489, DT933245, DY525564, DT935617, DY527633, DY527770, DR409568, DR775877, DT934173, DY526772, DR408199, DR780370, DT936127, DY527775, DQ115328, DR781337, DT936883, DY525835, DY527737, DY527378, DR781519, DR408026, DR776664, DY526284, DR407930, DR409289, DT934785, DR779220, DR407132, DR780005, DY527461, DR406225, DR781918, DY529654, DR778670, DR409204, DT934506, DT937315, DR781950, DR408320, DY525109, DR409259, DR408043, DT934229, DT933440, DR407257, DR409696, DR782229, DT933556, DY527420, DR408174, DY528351, DR776748, DT934557, DY525528, DY526753, DY528914, DR779071, DR408339, DR778305, DT933738, DR409776, DR776802, DT936251, DR409692, DY527230, DY524854, DY526661, DY527115, DR782148, DR779178, DY526022, DR777780, DR778162, DY529387, DR780340, DT936704, DR407851, DR781040, DY529211, DY526589, DY527237, DY528334, DY528913, DY525036, DT934018, DT934040, DT934498, DY528641, DR408917, DR408781, DT937191, DT935641, DT935164, DY527747, DR776255, DR780097, DR779975, DR777663, DR776989, DT933919, DR777944, DY528622, DY525267, DR409157, DR780714, DT935066, DR780312, DY524626, DR778613" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98663.1" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004160" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR004539" /db_xref="PFAM:PF00009" /db_xref="PFAM:PF03143" /db_xref="PFAM:PF03144" /db_xref="WormBase:CRE20182" /db_xref="WormBase:WBGene00061628" /translation="MLSSVFTFCCLFCFFFHKIFSVGKHFAHSVAAMGKEKVHINIVV IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS KNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSESRFTEITNEVSGFIKKIGYNPK AVAFVPISGFNGDNMLEASPNMPWFKGWAVERKEGNASGKTLLEALDAIIPPQRPTDR PLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEA VPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQIAAGYTPV LDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDY APLGRFAVRDMRQTVAVGVIKSVEKSDGSTGKVTKSAQKAAPKKK" gene complement(<5593..>6247) /locus_tag="CRE_20278" /db_xref="WormBase:WBGene00082235" mRNA complement(join(<5593..5719,5795..5965,6162..>6247)) /locus_tag="CRE_20278" /product="hypothetical protein" /db_xref="WormBase:CRE20278" /db_xref="WormBase:WBGene00082235" CDS complement(join(5593..5719,5795..5965,6162..6247)) /locus_tag="CRE_20278" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98594.1" /db_xref="WormBase:CRE20278" /db_xref="WormBase:WBGene00082235" /translation="MTQTLHDKETKDDTGYYTPKNILNPAMFRLAEITRALSEVNIKI DQDKLLEDHRHPLNMKQLNNRESNHHSDVEKIETLDVENEARSKSKTGLIDIFKNNED NIGRGLIFSLTVSIILLILMLVFWS" gap 7523..7532 /estimated_length=10 gene <8346..>12793 /locus_tag="CRE_20183" /db_xref="WormBase:WBGene00061629" mRNA join(<8346..8378,8424..8531,8576..8748,8980..9184, 9339..9457,9508..9821,9903..9982,10026..10150, 10205..10818,10862..11070,11116..11327,11386..11950, 12020..12171,12219..12372,12420..12513,12558..>12793) /locus_tag="CRE_20183" /product="hypothetical protein" /db_xref="WormBase:CRE20183" /db_xref="WormBase:WBGene00061629" CDS join(8346..8378,8424..8531,8576..8748,8980..9184, 9339..9457,9508..9821,9903..9982,10026..10150, 10205..10818,10862..11070,11116..11327,11386..11950, 12020..12171,12219..12372,12420..12513,12558..12793) /locus_tag="CRE_20183" /note="contains similarity to Pfam domain PF00929 Exonuclease; contains similarity to Interpro domains IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2), IPR013520 (Exonuclease, RNase T and DNA polymerase III), IPR006055 (Exonuclease), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DT934061" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98544.1" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR006055" /db_xref="InterPro:IPR013520" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00929" /db_xref="WormBase:CRE20183" /db_xref="WormBase:WBGene00061629" /translation="MATAGTGQANEWRLAAPHFSINTNVESSVNCIKFDPHEELFWTG SAAGKVASFLPTNHFSRYSAFVVSKVSGVNSLEPTENALFALTDTSLRVTSKQGIPIG KYTSQSMTRMMAMCRMPGTSTFVMGGFQEKLIHYDFVKEKEIRTTDLKEGEHSIIIRY NGTNTFTADSKGNVIVKSPKNFETLQVIDCHQDRILDFDVQGSKLISCGVTMNRQQNM DRFVKVYDLRMHKALTPCTSQLLPQFVRFIPSYCERICIMAQSMNLIDPGNNWGSHPA SLRMFDLASNGNHVEFGVETSIVTAFDYSSSKNFAAIGSHVGVICAYADRDQPIVNDS SKETIFAAPPAQPPISFAIDDTTQTFGSIPFPFSQGPLVSDWPSELTQIVHRRRKPPS DLTNVKSIHYATQIRNPRINSKLKQHNIVPYFLEHIESVIEVHDVQKIVEQSEHRMVK TRVSKLYKKRPPPVNHVPSRRGNSSDETPETYTWNTIRHITMQSTHAMNLVANTVVQV VYSLSPLRSIVMRHICTNDTCITCELHFLFNAFSSKIGQSDGIITTNLALALTRNGVS LKTGGVLHAINEVIKTILDDVAEKDINASVSTKFNRHLCCIRCRGLQTVEAYNDHLLS LNYGSLHQTSLCQLIEKSLHLGPETGEKDCEDCTQMSRMECKRKVRELSPVLLISTNT SSEDYVDFWRRQLSTHEVRPDAQTNSFGSVPESPSEKKRCRYGEDCRNKKTCKFAHGH IDWSSEQSKLLEHVDSSQWSHYIPSRIAAQVCEGIVRISDISDIPGYDEPTAIIYELD AMIHVIGNGEHEVKWTHPVTLLRESPVASTAWTLINEQLVSRLHDHEARYVDGRWKLP ALLVYRQKGDEILFSEKTFSDDLFFSDDNLAMNGTESLAIKSMKDLPKAGELVGLDAE FIKIKTDMLEFDGRSVQVRAVGRASCVDATGQKVIFDDYVRLTDDMKVVDYLTRYSGI VESDLLPASSDKYLTTHKRLLLRMHVLIQRGVIFVGHALHNDFTVINVHVPEPQIIDT VVLLRLEAQRMLSLQFLVKEMLGEIIQTAEHDSVVDAQYALKMYRKYLELRDQGILSS EMRRIYTILPSCNSPSQTSSPLIVSTLRKTPDDPADAAPQTI" gene complement(<13127..>13987) /locus_tag="CRE_20279" /db_xref="WormBase:WBGene00061630" mRNA complement(join(<13127..13330,13374..13502,13547..13700, 13748..13913,13960..>13987)) /locus_tag="CRE_20279" /product="hypothetical protein" /db_xref="WormBase:CRE20279" /db_xref="WormBase:WBGene00061630" CDS complement(join(13127..13330,13374..13502,13547..13700, 13748..13913,13960..13987)) /locus_tag="CRE_20279" /note="contains similarity to Pfam domain PF01243 Pyridoxamine 5'-phosphate oxidase; contains similarity to Interpro domains IPR012349 (FMN-binding split barrel), IPR011576 (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core), IPR000659 (Pyridoxamine 5'-phosphate oxidase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98617.1" /db_xref="InterPro:IPR000659" /db_xref="InterPro:IPR011576" /db_xref="InterPro:IPR012349" /db_xref="PFAM:PF01243" /db_xref="WormBase:CRE20279" /db_xref="WormBase:WBGene00061630" /translation="MDTPSVDIQNIRAKYNNSQEPYLLEENLPTTDPFSLFDTWFRDV ASQSDLTFEEINAVSLSTVGKDLRPSSRMVLLKAYTPTGFSFFTNYTSRKGHQLEENP NAAMLFYWPKVNRQVRVEGVVEKLPDEMAVAYWNSRPLASRIGSKSSLQSEVVPNRQF LESKKAELTDLAEREGSHAITKPTAWGGFHLIPRYFEFWQGQSDRLHDRIVFERDMDI WLLKRLSP" gene <15922..>17402 /gene="Cre-rpn-6" /locus_tag="CRE_20184" /db_xref="WormBase:WBGene00061631" mRNA join(<15922..16006,16057..16410,16487..16815,16859..17164, 17214..>17402) /gene="Cre-rpn-6" /locus_tag="CRE_20184" /product="CRE-RPN-6 protein" /db_xref="WormBase:WBGene00061631" CDS join(15922..16006,16057..16410,16487..16815,16859..17164, 17214..17402) /gene="Cre-rpn-6" /locus_tag="CRE_20184" /note="contains similarity to Pfam domain PF01399 PCI domain; contains similarity to Interpro domains IPR013143 (PCI/PINT associated module), IPR011991 (Winged helix repressor DNA-binding), IPR000717 (Proteasome component region PCI); coded for by the following C. remanei cDNAs: DR778185, DT937380, DR782544, DY525076" /codon_start=1 /product="CRE-RPN-6 protein" /protein_id="EFO98665.1" /db_xref="InterPro:IPR000717" /db_xref="InterPro:IPR011991" /db_xref="InterPro:IPR013143" /db_xref="PFAM:PF01399" /db_xref="WormBase:CRE20184" /db_xref="WormBase:WBGene00061631" /translation="MSGGTIMDTMTSLPHQNDQNVIRHLTNLVKSPVSGDDDIKKKED SIMELGNILAQNKQTEELRKMIEQTRPFLVSLGKAKAAKLVRDLVDLCLKIDDQDGDI KVGLVKECIQWATEQNRTFLRQTLTARLVRLYNDLQRYTQALPLAADLIRELKKVDDK DVLVEVELEESKAYYNLANIGRARASLTGARTTANAIYVNPRMQAALDLQSGILHAAD EKDFKTAFSYFYEAFEGYDSVDEKSAALTALKYMLLCKVMLDVPDEVNSLLSAKLALK YSGSDLEAMKAIAAAAQKRSLKDFQVAFGSFPQELQMDPVVRKHFHSLSERMLEKDLC RIIEPYSFVQIDHVAQQIGIDRSKVEKKLSQMILDQKLSGSLDQGEGMLIVFDIVTPD EAYQTALDTIHAMGEVVDALYSNASKIN" gene complement(<18821..>21950) /locus_tag="CRE_20280" /db_xref="WormBase:WBGene00082248" mRNA complement(join(<18821..18950,19028..19295,19380..20295, 20346..>21950)) /locus_tag="CRE_20280" /product="hypothetical protein" /db_xref="WormBase:CRE20280" /db_xref="WormBase:WBGene00082248" CDS complement(join(18821..18950,19028..19295,19380..20295, 20346..21950)) /locus_tag="CRE_20280" /note="contains similarity to Pfam domain PF04054 CCR4-Not complex component, Not1; contains similarity to Interpro domain IPR007196 (CCR4-Not complex component, Not1); coded for by the following C. remanei cDNAs: DQ115347" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98669.1" /db_xref="InterPro:IPR007196" /db_xref="PFAM:PF04054" /db_xref="WormBase:CRE20280" /db_xref="WormBase:WBGene00082248" /translation="MRAMTAGMAMITCRDPLASTMHANLAQAFSSSLRSSAGTPELKQ MIEEASSTITQDNVELSTNFIVKTACEKATQEIEKRLEGDYQKRIAVKNEQGIYRDEA AAAIHAQLPKAIATHPGPTDKALMSIYDQFSSRICGFKANAGDELLSTEPGNGSITPV PTQSKEMELVCQQLHIIIKEVDQTTQAQPHINNAAFQTVCLMREMMKQITVSKDGNQL LQLVSRSTEHLLHAYRLEGAPSKNLLDVEWARRLRDLFIGLMRLLQNYFPLVELSRRI TTAIMQIRSDYKWNLEGIEILFKQNLLQSVLWDQHLAGSMDNGGNMEAVCFAQKFVRS IGGGDMNRIQFLKDRFPLTCDQLTKLHQLQSATRTEGINNGINSGAVHPGHQQQQPPV ALPMDAAPMPQASAEAMAQRGYDDHEMTAKVEVIMREWIGLCYSPTGQRSPQESLAQM IQLMHEHGVLATDDKITQFFRLCVENCVDISVRVMKSEQMTNGMPTTMIRHRCYYTLD AFVKLMALMIRHSDNGQSQNKINLLKKLLNIIVGVLHMDHEIRKQDFNAMPYHRILIS LFNEITGPDPLKLLEPIAWSILEAFGQTFFALQPRRMPGFAFAWLDIVGHRNVIGRLL ANTGIAETVDSVKTAATYTQLIISHLKFLAPFLRNIQLPKSIAILYKGTLRVLLVILH DFPELLCEFHYVICDTIPPNCVQLRNLILSAYPHPMRLPDPFALNFKQVDTIPEMAVE PKSNLNMATIIPDNIRVPLDEYLSNRTPVDFLPNLPTLLQTQNQAGTKYNTTVMNALV LYVGIRAIENLHLKRQRISTLTIAHTSFMDIFQNLAIQLDTEGRYLLFNGIANQLRYP NAHTHYFSCVFLYLFKNSTNDTIQEQITRILFERLVALRPHPWGLLITFIELIKNPTY NFWRYEFTSCAPEIQRLFQNVANTCVPPQGSQIPQAQSEGAMLGNSMGANQQQNPSSN " gene complement(<22006..>30871) /gene="Cre-let-711" /locus_tag="CRE_20281" /db_xref="WormBase:WBGene00061632" mRNA complement(join(<22006..23538,23609..24292,24432..24623, 24678..25010,25753..26190,26406..27066,27129..27219, 27263..27554,27602..27765,27835..27961,29761..29919, 30034..30180,30441..30568,30826..>30871)) /gene="Cre-let-711" /locus_tag="CRE_20281" /product="CRE-LET-711 protein" /db_xref="WormBase:WBGene00061632" CDS complement(join(22006..23538,23609..24292,24432..24623, 24678..25010,25753..26190,26406..27066,27129..27219, 27263..27554,27602..27765,27835..27961,29761..29919, 30034..30180,30441..30568,30826..30871)) /gene="Cre-let-711" /locus_tag="CRE_20281" /note="contains similarity to Interpro domain IPR001547 (Glycoside hydrolase, family 5)" /codon_start=1 /product="CRE-LET-711 protein" /protein_id="EFO98457.1" /db_xref="InterPro:IPR001547" /db_xref="WormBase:CRE20281" /db_xref="WormBase:WBGene00061632" /translation="MIRNRENMERPVSKRGVISLLSKMPLGYVLNSCSCAYIDNLLAH SSVHRAKPHSFMIQRLVVICGRSSPAVANHAANIILSAFNFCQIDAPAKKFLDEEAAL SLFHTILSYATVTQEARSVMEIRGAQRLTAALCDLIAAYTKIMDDMEASKTLTHLCKK LATVYDPLVVLPFISKLAKSRRLRHYLQPLFLGHCEYTSDTWGVSPESAEIYNHISRG NFSTQTLIEIVQTFLEKEVKEVIISSSTDPIKLVQYLISCSNQNNAEIVQALAFMLYS NTKLIPNGTGGNIDMDVQSADTITTARLGDAKFTQPVKDALLNSGRDALRRRLEIYGP TLLSSVELFVEELKQAPIQRRLITNSSIANAIIFMNQCNYDLEVGIDKGRFETPPYYT GGANFIIGLTKYIEEKQIATENDDEAYDWYPDINWIEVIKELDTEEILICRRTLILFS EIFPIMFQNDPQGFPVSFFYTPWKNWERQLHLYDHMIEHSDVWNLSMYPHTKVLTPEL NLKTIPDDTPAAVQLWNCQEFSNLLLTIGNLQPQMLPTIRQFFSFGVMQSGDVSTLAL ILSQTQWTPIRQELVRHFLPQFILKSPNVTPILNLAWNDPSLSKHMRQHVIWCLTAMY TSDNSQLAKILDVAHDIKPTGLSELLNQPAKNLPFMVDLACLASKRDYLNLEKWIEDK EKTHGEAMTVAVLQYIHKKYQQSQMVAAVVPKPKTATPGVPSDPLHVLIPFVIKKARK PHRQQFPLLFQVMKENSGRSSSVSSGGHQNVQQASGSQPSQQYVSGAGLPSSSAVSQQ QPPQQASMQQQISQQAIVSSSAPSQHQIHSQQQPVPGPIQRPAQYPPQSMFPPQPQAQ QHPHMMAQPPPSASQNAQPGMNLLMNMGQFSSGNNRDLLKVVQPAPPPPSSMSPSSQM MRSLIPPLAQRQNSNPGWHAAPTTPLQRPSGPPTPQQQIDFRSQIQDFVPQGQHQLQR SGSVSGRSGGSGGQKTGVSSSGFSVGAPIAGSAAAVAAATAQQTSMDDFSSMTFAEDI QEEANSYFEKIYSVNNAMSVDTLIDLLKKFKAGNDRRERFVLACVVKNLFEEYRFFHE YPERELRTTAAVYGGIIREDIITNVQFATAVRKVIESLSADSNTMLWTFGIVALQHCR SKLCAYPKVCSMIVNSDNFSKFPQLLKDYVIAGVKGELPPEGGRHTPVGTHSPSASST PTPATVPTNWGAVARASSTDPKNQVPANRTGNVLSYTNVDTLVMATNKDGAEIAQPAE AIVDKISFLFNNLSTTNLVQKKDEVLEMIIEHGEGFTRWLSQYIVMKRVSIEQNFQPL YNQFVTAIDNPYLDQCIKRETFRNIRILLRTDKKTTVASNYSDRQLLKNLGSWLGAIT IARNKPILLNDLDLKSLLLEAYYKGQAELLFVVPFISKILTACSKTTLFTPTCAWIRS ILKVLAELHNEPDLKINLKFEIEVLCKELNVDLSQLPLDGILKDTEKLVRVPQQLCEV KVLGRPEAASPVQSQIRLSNSAEQLAGMAPAIPDQAKPATPQPTEAELQAGAGGSGSQ GAEAQVVPNVTHFAYHDINVLTYDGLIPHVKIVSHLPLFQLHPHAKHLVRPAMIHAIK ELIGPVTERALKIAMTVTESLVRKDFALDPEEQNLRAASFHMVNNIFSFVSKIT" gap 29059..29535 /estimated_length=477 gene <31972..>34541 /gene="Cre-pqn-46" /locus_tag="CRE_20185" /db_xref="WormBase:WBGene00061633" mRNA join(<31972..32369,32666..32786,33383..33727,33796..33924, 33972..34026,34079..34271,34319..>34541) /gene="Cre-pqn-46" /locus_tag="CRE_20185" /product="CRE-PQN-46 protein" /db_xref="WormBase:WBGene00061633" CDS join(31972..32369,32666..32786,33383..33727,33796..33924, 33972..34026,34079..34271,34319..34541) /gene="Cre-pqn-46" /locus_tag="CRE_20185" /note="contains similarity to Brugia malayi Putative uncharacterized protein (Fragment).; TR:A8P7I1" /codon_start=1 /product="CRE-PQN-46 protein" /protein_id="EFO98547.1" /db_xref="WormBase:CRE20185" /db_xref="WormBase:WBGene00061633" /translation="MWLLLALLPSVVLTQNTFQNTIFDLPAQLGGEPVGVAAQAQGAP LFVQTVDQKPPAPVAAQLPNAVPAAPQPQAVTPAPFTFPTLPTVAPFTLPSHPTLAPF TLPTHAPFTFPTHPPLVFPPPSTPAPFVPPSPYAFVPQQGYQQQNNFQPYNGYPQQQQ GNQYYNNNGYYNQQQQYNGYNNNNNQQQQYNGYNNNNNYNQQPQQVVQQPQQPQQPQQ PQQSQQPQVPQVPHQAVQQVQPQQQLPQQPQHQNGGPQQVQSFESNSQIVQPVRAVQA NAQVVQPVIRPAANAVATAIVDTDSSAKKATEFNKANGIEQPKPAHAEKASLDAEVDA NVDRHLWFAADYDVKQCRKSLNGIGVRFQKKFPSYLQKGGKDRELAELVEQRLLECER KSSASHWDKVDTLLQKISLTKSEEGECRAGLIQERISCVNLLKYTCQFVDSSYHFKLV PARITIQEARQAESGAEKCRQVIRIVKQRLESGAVTL" gene complement(<34768..>37300) /gene="Cre-coq-2" /locus_tag="CRE_20282" /db_xref="WormBase:WBGene00061634" mRNA complement(join(<34768..34842,34894..35196,36090..36223, 36343..36428,36613..36734,36779..36945,36990..37096, 37146..>37300)) /gene="Cre-coq-2" /locus_tag="CRE_20282" /product="CRE-COQ-2 protein" /db_xref="WormBase:WBGene00061634" CDS complement(join(34768..34842,34894..35196,36090..36223, 36343..36428,36613..36734,36779..36945,36990..37096, 37146..37300)) /gene="Cre-coq-2" /locus_tag="CRE_20282" /note="contains similarity to Pfam domain PF01040 UbiA prenyltransferase family; contains similarity to Interpro domains IPR006370 (4-hydroxybenzoate polyprenyl transferase), IPR000537 (UbiA prenyltransferase); coded for by the following C. remanei cDNAs: DR781862" /codon_start=1 /product="CRE-COQ-2 protein" /protein_id="EFO98639.1" /db_xref="InterPro:IPR000537" /db_xref="InterPro:IPR006370" /db_xref="PFAM:PF01040" /db_xref="WormBase:CRE20282" /db_xref="WormBase:WBGene00061634" /translation="MKLRFYSIKMIIKSIGLNGKAQYASWVVRLSTNSHISCATQIPS TKRFISTSPTQCTSLIPRASSLVAASPPNLKPYLQLMRVDKPIGTWLLYWPCTWSIAM ATPAGQLPSLYMLTLFGTGAFLMRSAGCVINDLWDKDFDKKVERTKLRPLACGSLTEK QAVGLLAGLLSSSLAILLQLNWFSVAVGASSMALVVGYPLAKRYTYWPQFILGATLNW SVLIAWAEMGHIKDFGIFLPLYTATILHTVIYDTIYSHQDKADDIMIGVKSTALRLGE DTKKWLSAFGVGTVASLTACGMASDQTWPYYVALAATTAQLGWQVGTVDIDNGSDCWD KFKSNSWMGIILFSGIVASTLLKENEDSKELKNKLKVAEDEMDDVTVN" gene <37905..>39757 /locus_tag="CRE_20186" /db_xref="WormBase:WBGene00061636" mRNA join(<37905..38225,38269..38490,38537..38701,38749..39057, 39102..39386,39434..>39757) /locus_tag="CRE_20186" /product="hypothetical protein" /db_xref="WormBase:CRE20186" /db_xref="WormBase:WBGene00061636" CDS join(37905..38225,38269..38490,38537..38701,38749..39057, 39102..39386,39434..39757) /locus_tag="CRE_20186" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00017 (SH2 domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98638.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE20186" /db_xref="WormBase:WBGene00061636" /translation="MGYLRTNLFSSIHLVSKLRNFRTVRVSMNKQNVNHHDQKKKKLP NQGDAKETDVISSLKKSSSTIFSQIRQAYNKKGPQEQQCRKTKGMETSEQQWFHGLLP REEVQLLLQKNGDFLVRMSEPGAGQTRHLILSVMQNEPSADAMHYVIRNSDGKFSITG KENFDSLIDLINHHKQNRLHDETPTSVLINPIGRQSWELNHADVTMTKTLGEGAFGEV KLGTLKRESETLDCAVKTAKLEKMTKEQIKEITSEARIMRGLNHKNVVRCYGVAAVDE PLLVVMELVPGGGLDGYLQKNSVSWPEKLDIITQVAGGIAYIHSKNIMHRDIAARNVL YGKGVAKVSDFGMSRIGTEYQMNPNKKVPIRWLSPETLITFVYTQQTDIFAFSILCWE VIENGTQPYPEFKVVEVHQKVAKDDYRMPIGDKVPSQLADVIKKCWTRNANLRPSMSQ VVLMMTAITGKKETTTPSKSGGISAERAKIFGGVGVSPASDPNREKTIVKTGRRNVKK RPTCQPSGGNSGAMLSSPSSSKEKKKKGGKTKH" gene complement(<39854..>41485) /gene="Cre-byn-1" /locus_tag="CRE_20283" /db_xref="WormBase:WBGene00061635" mRNA complement(join(<39854..40102,40150..40245,40287..40431, 40495..40584,40636..40769,40814..40969,41014..41116, 41166..41281,41336..>41485)) /gene="Cre-byn-1" /locus_tag="CRE_20283" /product="CRE-BYN-1 protein" /db_xref="WormBase:WBGene00061635" CDS complement(join(39854..40102,40150..40245,40287..40431, 40495..40584,40636..40769,40814..40969,41014..41116, 41166..41281,41336..41485)) /gene="Cre-byn-1" /locus_tag="CRE_20283" /note="contains similarity to Pfam domain PF05291 Bystin; contains similarity to Interpro domain IPR007955 (Bystin)" /codon_start=1 /product="CRE-BYN-1 protein" /protein_id="EFO98636.1" /db_xref="InterPro:IPR007955" /db_xref="PFAM:PF05291" /db_xref="WormBase:CRE20283" /db_xref="WormBase:WBGene00061635" /translation="MVKKNLKGRGDKLSANAPLDNQLEAGNVAKQREELREKQKRKRE ESETDEFVPNSLSSKILNDARKQLLEEAIEENGDADSSTARVPKRQRGSWLGGDEQSE GDEEDNEDEQEEDNGFEDQIIELDPQDEADLARFLKKDAAQMSTLYDIIQAKIESKQN DAELALSQIDPNEFNMRDMDSEVVEMYEQIGQYMSKYRSGKVPKAFKIIPKMINWEQI LFLTKPETWTAAAMYQATRLFASNMNPKMCQRFYTLVLLPRLRDDIDEFKKLNYHLYQ ALCKAIYKPSAFFKGLILPLLESGTCTLREAVIFSSVLTKVPIPIFHSAAAMLKIAEM EYTGANSVFLRALIDKKYALPYQAVDGVVNHFIRLKTDERDMPVLWHQCLLALCQRYK NDLSAEQKAAIHELIRVSWC" gene complement(<42092..>43542) /gene="Cre-inf-1" /locus_tag="CRE_20284" /db_xref="WormBase:WBGene00061637" mRNA complement(join(<42092..42292,42345..42596,42648..43067, 43153..43425,43480..>43542)) /gene="Cre-inf-1" /locus_tag="CRE_20284" /product="CRE-INF-1 protein" /db_xref="WormBase:WBGene00061637" CDS complement(join(42092..42292,42345..42596,42648..43067, 43153..43425,43480..43542)) /gene="Cre-inf-1" /locus_tag="CRE_20284" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain); contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014014 (RNA helicase, DEAD-box type, Q motif), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal); coded for by the following C. remanei cDNAs: DY525628, DT936565, DR781921" /codon_start=1 /product="CRE-INF-1 protein" /protein_id="EFO98479.1" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00270" /db_xref="PFAM:PF00271" /db_xref="WormBase:CRE20284" /db_xref="WormBase:WBGene00061637" /translation="MTDAKNDVNGSSVVDADGLIEGNYDQVVESFDDMELKEELLRGI YGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALV MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLENGIHVVVGTPGRVGD MINRNALDTSRIKMFVLDEADEMLSRGFKDQIYDVFRSMPQDVQVVLLSATMPSEVLD VTDRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCN TRRKVDQLTEQMTNKQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDV QQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIETYYTTQIE EMPESIADLI" gene <44893..>48022 /gene="Cre-flap-1" /locus_tag="CRE_20187" /db_xref="WormBase:WBGene00061638" mRNA join(<44893..44979,45130..45246,45519..45578,45631..45720, 45770..45943,45990..46066,47079..47184,47231..47351, 47637..47716,47766..47870,47918..>48022) /gene="Cre-flap-1" /locus_tag="CRE_20187" /product="CRE-FLAP-1 protein" /db_xref="WormBase:WBGene00061638" CDS join(44893..44979,45130..45246,45519..45578,45631..45720, 45770..45943,45990..46066,47079..47184,47231..47351, 47637..47716,47766..47870,47918..48022) /gene="Cre-flap-1" /locus_tag="CRE_20187" /note="contains similarity to Brugia malayi LD07988p, putative.; TR:A8PID4; coded for by the following C. remanei cDNAs: DY526225, DT935809" /codon_start=1 /product="CRE-FLAP-1 protein" /protein_id="EFO98511.1" /db_xref="WormBase:CRE20187" /db_xref="WormBase:WBGene00061638" /translation="MSSYPSSGRRRPITRTEAEERALDKISREAEARMKLKRETREQA RQGRYQLLEKKVEEDAEAFRHDTASTSNTNGVSSSTNQTQEQLHDKVIELQDRVQQVM FLYSQLDNEKSTLLYEVDLLKDELEEKDASLNLSSRECRDLTSEVKALKRTIDALHAT QQQLKSEISQRDQLIQENGLCLVEEDPEEEGSESSNNASGEIRSGPYLFKRETIRLVD RVVPGAASLDEKVQKLIDTNKKMRKDYEELEQTIYTQRHARNARDSANVMPNQGVDDV NKDAAKHLAEMKLKMQDLERENTNQQGNVIRMEGQMKRYKSNADAAEKELDELKTQMR QTKKELRDKENALDEQKETNKHLQSRLEKMRMQRTGRPL" gap 48423..48432 /estimated_length=10 gene <55533..>56665 /gene="Cre-pdf-1" /locus_tag="CRE_20188" /db_xref="WormBase:WBGene00061640" mRNA join(<55533..55622,56321..56418,56593..>56665) /gene="Cre-pdf-1" /locus_tag="CRE_20188" /product="CRE-PDF-1 protein" /db_xref="WormBase:WBGene00061640" CDS join(55533..55622,56321..56418,56593..56665) /gene="Cre-pdf-1" /locus_tag="CRE_20188" /codon_start=1 /product="CRE-PDF-1 protein" /protein_id="EFO98503.1" /db_xref="WormBase:CRE20188" /db_xref="WormBase:WBGene00061640" /translation="MNRFTVSMIALLAVFCAVSTATPLLYRTPQMYDDVQFVKRSNAE LINGLIGMDLGKLSAVGKRSNAELINGLLSMNLNKLSGAGRR" gene complement(<57968..>59972) /gene="Cre-twk-6" /locus_tag="CRE_20285" /db_xref="WormBase:WBGene00061641" mRNA complement(join(<57968..58056,58106..58213,58949..59078, 59129..59435,59482..59642,59775..>59972)) /gene="Cre-twk-6" /locus_tag="CRE_20285" /product="CRE-TWK-6 protein" /db_xref="WormBase:WBGene00061641" CDS complement(join(57968..58056,58106..58213,58949..59078, 59129..59435,59482..59642,59775..59972)) /gene="Cre-twk-6" /locus_tag="CRE_20285" /note="contains similarity to Pfam domain PF07885 Ion channel; contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR013099 (Ion transport 2)" /codon_start=1 /product="CRE-TWK-6 protein" /protein_id="EFO98568.1" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR013099" /db_xref="PFAM:PF07885" /db_xref="WormBase:CRE20285" /db_xref="WormBase:WBGene00061641" /translation="MNETPDVVEGDAVSKCLKIFPIDKKITIEMKRKAEKCIRNESVI DDFGKAFYFSWTLYSTVGYGNLYPHSSIGRFMTAFYSLLIIPVYIAFKFEFGTFLVHF WITAVKHTGNYFKILFNRVMNRVFVRVPIDQENLKSLHHRDRFIFFSSIVLCLICLIS SSILFSICENISFSSSIYFGIISMSLIGLGDIVPTNLIWFIAYCFFFLITDILSNHFF YFCQARIRFFFHYFARRLLLKDRRNLKSESTVSIKNVPVINSQCMPSLKSMASDKSKE KPVVHTPPTNSGPSGGELEKKKAPKANEPQMAARDANDNETINDAKSDWGELPA" gene complement(<60406..>62986) /locus_tag="CRE_20286" /db_xref="WormBase:WBGene00061642" mRNA complement(join(<60406..60609,60654..61055,61101..61339, 61384..61592,61703..61801,61843..61921,62947..>62986)) /locus_tag="CRE_20286" /product="hypothetical protein" /db_xref="WormBase:CRE20286" /db_xref="WormBase:WBGene00061642" CDS complement(join(60406..60609,60654..61055,61101..61339, 61384..61592,61703..61801,61843..61921,62947..62986)) /locus_tag="CRE_20286" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98546.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE20286" /db_xref="WormBase:WBGene00061642" /translation="MTQRRRGLSFFDAQASNVKKIAVMASTVAFEFNKATLKLRRSLH VSPRNSPEVQRKSTAGGDTEIESPGSTQSTSRKSSKRNRQLCAELSSFALYPLFGALS PSHFSSPNLLFQNEKKQPKEVVEFLQLSDTDMYQIMCFLNPRSLLNLSQTCGRLRQLC LSHEENTEKRDVTSHEIFISFNQIRRKTEVRLLKRERTCTDPQFTGNTIRELLAPFSR ALTRITFETTVFVTDWLDEILELHQQNRLIPLSLVFTGGALTKGNQLTGADLRSITET EFVDFVAKLQPHLQEVQLSTSRYFLKVLFKMFIYLYTRMFKMNTDPPHLLAMITMLSS FGIVYERPPLRFYYEEISDAITFWKSDSLSRSCDVYMRRPHDVSIDTWINLSGSIDES RIDPYTDEILVSKITIKHSFLVHIDLVFHFH" gene complement(<63800..>65636) /locus_tag="CRE_20287" /db_xref="WormBase:WBGene00061643" mRNA complement(join(<63800..63895,64035..64158,64206..64329, 64383..64559,64632..64776,64825..64900,64949..65166, 65259..65402,65451..65541,65590..>65636)) /locus_tag="CRE_20287" /product="hypothetical protein" /db_xref="WormBase:CRE20287" /db_xref="WormBase:WBGene00061643" CDS complement(join(63800..63895,64035..64158,64206..64329, 64383..64559,64632..64776,64825..64900,64949..65166, 65259..65402,65451..65541,65590..65636)) /locus_tag="CRE_20287" /note="contains similarity to Pfam domain PF01399 PCI domain; contains similarity to Interpro domains IPR013143 (PCI/PINT associated module), IPR000717 (Proteasome component region PCI); coded for by the following C. remanei cDNAs: DR777841" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98542.1" /db_xref="InterPro:IPR000717" /db_xref="InterPro:IPR013143" /db_xref="PFAM:PF01399" /db_xref="WormBase:CRE20287" /db_xref="WormBase:WBGene00061643" /translation="MSFLRSVGDYFNEIENLNYGQNWKNGEKMSKLLSLEDEHSKHSF LQVNDYGEKNRRCRVAEDEALDEIVCLHLHVLYNVHEAKDLITAQSTQIRIIQVFNKE ILQKRRDENWFLPIFYRLCTDLRWLSKEAQSCASGDDEGDSNADSYFESAAKAITECY RTCVSDVHAEEGRTKKVAMLNMTNQLFQIYFQINKLNLLKPLIRAIDNCGPLYSKFLM ADKVAYNYFLGRKALFDGELSLAEKSLMYAFRNCPAECMSNKKKILIYLIPVKMFLGH MPTASLLHEYRLDEFQEVVAAVKDGDVGRVDAALTKNEPFFIKCGIFLVLEKLRTITS RTLFKKVSQIIGTTQIPLEAFLTGLRLVGVTDVNMDELECIIANLIAEKKIKGYLAHQ QQKLVISKTNAFPTLSSVTSS" gene complement(<66005..>67556) /locus_tag="CRE_20288" /db_xref="WormBase:WBGene00082241" mRNA complement(join(<66005..66108,66949..67078,67125..67337, 67383..>67556)) /locus_tag="CRE_20288" /product="hypothetical protein" /db_xref="WormBase:CRE20288" /db_xref="WormBase:WBGene00082241" CDS complement(join(66005..66108,66949..67078,67125..67337, 67383..67556)) /locus_tag="CRE_20288" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98625.1" /db_xref="WormBase:CRE20288" /db_xref="WormBase:WBGene00082241" /translation="MPAILSRLSSASEEKEATKKEDSETDGSSEEIPHVTRRESRRQT VIIPVNTNNARRESSLPIDDSILEILHEEYKSVSAVLCISHIYIFLAGTIFFFLLSLF QIGIQCLFFSRFLLKNPFTRKILFLLSMTFMTVGIISMGFLKTTAQVDSSIGYQILVY FFYICAFIGFVFTNMYNVSMVFVFGRDVKWLLHNEHEDENEEEISR" gene complement(<68284..>72309) /gene="Cre-brd-1" /locus_tag="CRE_20289" /db_xref="WormBase:WBGene00061644" mRNA complement(join(<68284..68385,68465..68607,68652..68712, 68814..68973,69920..70692,70870..70998,71051..71146, 71235..71517,71567..71629,71689..71876,71924..72092, 72141..72200,72248..>72309)) /gene="Cre-brd-1" /locus_tag="CRE_20289" /product="CRE-BRD-1 protein" /db_xref="WormBase:WBGene00061644" CDS complement(join(68284..68385,68465..68607,68652..68712, 68814..68973,69920..70692,70870..70998,71051..71146, 71235..71517,71567..71629,71689..71876,71924..72092, 72141..72200,72248..72309)) /gene="Cre-brd-1" /locus_tag="CRE_20289" /note="contains similarity to Pfam domains PF00023 (Ankyrin repeat) (2), PF00533 (BRCA1 C Terminus (BRCT) domain) (2)contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR002110 (Ankyrin), IPR001357 (BRCT)" /codon_start=1 /product="CRE-BRD-1 protein" /protein_id="EFO98579.1" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00023" /db_xref="PFAM:PF00533" /db_xref="WormBase:CRE20289" /db_xref="WormBase:WBGene00061644" /translation="MFENTKRALEEFQTKIECNKCRTTKKDLQYLGTSCKHAFCWDCI SDFSQKIPGRRSSVARHQCPTCAFPLDTTKIIGAHMLNTCYESLSDLRNLLDKATTSQ MTQVDIACTQNIFDKDAHQVSGNQGAIDRFLETQTHMPDELGQLNDEESTIVPKVENR ENSHSPELDIFHDYSADVKSARSSVKRSSTSTEHERKPKRSSVLKTVKNEPAEPNLFA SQIPQRTHENDLLTPFLEVWWFLDDPNTQIGLQRRSTAPYSSGVGKYAQSFGSSKKDE NDPFTTTIVLPKRQASLEQLSIKTPKVEPVEEPEEQPSISKRSRKVSVKMENIERRSQ SPMSFGEKSMSLKPEQRRSSFGTRRGELVIINSIQNNRIPQLQAAVDAGTCVNEKDNK GKTPLYLAVEYNSLEAAKILVEAGAVINASCEGTSSQRKLKTKLLPGGSTLETTLHEA VRRSNLPMIEYLLSKGASMKIRNSVGKTAEDLAKNDPKAKKIMEKFKTEQRALQPGKG KLIHFSLKLNFSVILPPKSRIYFVQLIDEKMLSDSEKRKLPGKINVRFPLFFRFILKL SFQLIGSDMNTQTHVVVAVDPKTRVLNINKDHIGEVLRAIVKPGMIVSHDWLKACITD SSKVDDDYSYLVRKVRWMESQIFENTIEIWKKTITKMQPGLFAGCKFYIPKPKYNFLD RPTLIEIVRSGGGQASARDTLLNEKDPAPYHNSRLKPNFVIYSLTHDIGEKFRDCAKY NLVSEQWFIEAILSCSISTPPH" gene <72578..>77525 /locus_tag="CRE_20189" /db_xref="WormBase:WBGene00061645" mRNA join(<72578..72679,72734..72925,72986..73186,73236..73427, 73469..73556,73608..73798,74758..74934,74986..75150, 75196..75335,75384..75870,75927..76096,76147..76249, 76301..76405,76453..76569,76774..76986,77032..77172, 77218..77394,77460..>77525) /locus_tag="CRE_20189" /product="hypothetical protein" /db_xref="WormBase:CRE20189" /db_xref="WormBase:WBGene00061645" CDS join(72578..72679,72734..72925,72986..73186,73236..73427, 73469..73556,73608..73798,74758..74934,74986..75150, 75196..75335,75384..75870,75927..76096,76147..76249, 76301..76405,76453..76569,76774..76986,77032..77172, 77218..77394,77460..77525) /locus_tag="CRE_20189" /note="contains similarity to Interpro domain IPR007015 (DNA polymerase V); coded for by the following C. remanei cDNAs: DT933333" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98555.1" /db_xref="InterPro:IPR007015" /db_xref="WormBase:CRE20189" /db_xref="WormBase:WBGene00061645" /translation="MRPPSDLLDIISKLAELEPTIRKGAVRELVAKQEELSNEEINNY VIERLISGCSSARAAVRLGYTTALGTILTSEAGKLWDLNRVLSVANKKMDLAEKTVAS GHAIGHYLILVAYCQSKKLKETEVTSVIEHSKKIRDVAPSLAFSQISLICSLSEKVKD SIFQKSVAPAVEMYLEGLSSQFTPENIYLALRLRTSHSATVVKYAKFVKKDGSCQFSD DQYPKLLAALKRCDYATLQVFLPLLIKVSVESSTFEKTYQKVLEPWALSSNETKVFDR ILSIVTQYFEFGGEVKSIVVVFTKEILNRMETATRGKGQFRLMSKKVEDFASFIKSKF ADLRDEEAYTTLKALEKCGNVDKACGTGLTTGLLSNLGKKQISVWIKENLTKQEEVRK IVTAFSNWDESSRVTVLTALLAQKATETSQAVVTSIIDSLFYVKTRAGEFASIQISDK NEQVLRQLVVAVQGEEDVKKAEKTIGKAKLRKKSLLILWYVTRLWSKIAADSADSEAY DSNSGEILMIAKNESDGNNSLVFVDLLLSILSREQKFHRTPTSFAFVHAIPTLESKDL SHIVEVSTLYRFVLRTLLVFQTAMMSEAELAGNGDEDMEDEEGMPFDESDIPNRNEND EEDSDSDSDEEEEEDDDEENEAVDQELLDKLNAALGDAAPRESSSDVEMDDFDDEEMQ KMDERLAAAFKAVAPKAAKDKKRSAKNVEALKMKIADLLLIAISSKELSEQNKIQLVV PLIKWAKVDAKTHDKVAQKALELVNIVVKMKFTDISEKDALQLLKNVLEEAQTTTNLL IIDAVARCVTFVIKTSSRDGKSMSAGVRTEFQKLFESYLKNVEGKVPSNFVIQPIADL PLLFVDQLGMLLDAGFDEQNRIFKRTEILGATSMIFSKQVLQDITIKAAIVKKIGKLA ASYFQSVVDSDKSELKPRLFGTVLQLVLKVTACVQNDEKHVDALRETLEPTICKMSEG EVFIQLKKINPTCHHIIGKSIPGAFTSIKKSLNIEN" gene <80014..>83699 /locus_tag="CRE_20190" /db_xref="WormBase:WBGene00061648" mRNA join(<80014..80090,80138..80333,82528..82665,82874..83426, 83479..>83699) /locus_tag="CRE_20190" /product="hypothetical protein" /db_xref="WormBase:CRE20190" /db_xref="WormBase:WBGene00061648" CDS join(80014..80090,80138..80333,82528..82665,82874..83426, 83479..83699) /locus_tag="CRE_20190" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98616.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE20190" /db_xref="WormBase:WBGene00061648" /translation="MELQRKRSFNSSTVSHDFRKEYKGSFLEKKGRKEGKKNGLKSIA EWIMTKASSTKKTNSSGTSATSTNSASHKSVVGAKIVTVQEKSSYFDCVPNEILFQIL ENCKSSESSTTLSARRVSRRFNACMDHISEVKVNVNFVESESNIGHHTCFKQFVFQNV PLSDELIDFLRRLFQFADISKLIQLSLSQVDFSSCNSLSLHRFLAPLIKSLEIFEITQ CNGMRADSVTDEHLAQLNASTIRRICIDGVKFASGATRNLDIGDGALRRFAKLAAFPT MILDRCAVTTNTVCDYTKEWFEQCNESEKQLRSQVCTVKRCPKVKGSQFESECRRRGL RCKNRRGSGSLTLYNVQEENTKREFTIALAALEDKELAEKLKITPPDDPISCNLLTVP SL" gene complement(<83974..>86766) /locus_tag="CRE_20290" /db_xref="WormBase:WBGene00061649" mRNA complement(join(<83974..84015,84127..84244,84293..84420, 84503..84617,84666..84750,84792..84914,84955..85128, 85303..85487,86375..86478,86554..>86766)) /locus_tag="CRE_20290" /product="hypothetical protein" /db_xref="WormBase:CRE20290" /db_xref="WormBase:WBGene00061649" CDS complement(join(83974..84015,84127..84244,84293..84420, 84503..84617,84666..84750,84792..84914,84955..85128, 85303..85487,86375..86478,86554..86766)) /locus_tag="CRE_20290" /note="contains similarity to Pfam domain PF00634 BRCA2 repeat" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98585.1" /db_xref="PFAM:PF00634" /db_xref="WormBase:CRE20290" /db_xref="WormBase:WBGene00061649" /translation="MFTLSFENAHAYLFYELLKYRFNKNGSFHETDSFDEPKGAPISM EPVFSTAAGVRIDVKQESIDKSKKLLNNDIKSLSSKNAFSSPLIRRKTNGTNAFVSPF RRDETTSDVRKRPPSNSTEGFDAPPLKKSMVTTVDPTASSKTKKSKKHKKDKKHKKDR KNRKERIEIHADVMRVSREYERDQMRLILQETDSSPKILAVCPYQCGKDIKFGDKILI DAKIKKKDNSETVTEVYFKKLLSNKYNGARRHITRHSIAERPYCLTPRFIYELSDEQI KKATVRVNILDLNLEIYDKCTACDNLISTLTSSSSKRKDCKNCKDDRAKTKTSIYSRM RVMDPTGQIFVNIETKAMEKVLEHFGYEGLDEWIAFKDPQERKNYVFRPLMIEVERKG DDWECTDVAEVDWKQYRDYLVEKKDKIIRKIEKSHK" gene <87817..>89119 /locus_tag="CRE_20191" /db_xref="WormBase:WBGene00061650" mRNA join(<87817..87885,88170..88311,88396..88520,88567..88672, 88717..88889,88958..>89119) /locus_tag="CRE_20191" /product="hypothetical protein" /db_xref="WormBase:CRE20191" /db_xref="WormBase:WBGene00061650" CDS join(87817..87885,88170..88311,88396..88520,88567..88672, 88717..88889,88958..89119) /locus_tag="CRE_20191" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98504.1" /db_xref="WormBase:CRE20191" /db_xref="WormBase:WBGene00061650" /translation="MAPLPRVKCYFDVVCPNSWITVQALTSHSSLFERVDFEPVCDFK IGILHNAQIWNQRRQVHNSRLWKSKKEVPESVESEETLSELGILQKIDERGKKLIGCE RVEPPMDWRNTYKSAVSRGSVIPQLFLTSIRERYPDLYQTAIHHLGNRLWNQRLPVHY GCHMSTVSRELGIPFKNAEDIVARLSSPENRSLLHKNCKEAVDFKLTEAPGLILTTDD GDTIKVDTINDIFDDSIMISKLSSISPTTRIEQKMSANRL" gap 89845..89854 /estimated_length=10 gene complement(<90721..>92275) /locus_tag="CRE_20291" /db_xref="WormBase:WBGene00082221" mRNA complement(join(<90721..90874,90919..91713,91957..92169, 92214..>92275)) /locus_tag="CRE_20291" /product="hypothetical protein" /db_xref="WormBase:CRE20291" /db_xref="WormBase:WBGene00082221" CDS complement(join(90721..90874,90919..91713,91957..92169, 92214..92275)) /locus_tag="CRE_20291" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2); coded for by the following C. remanei cDNAs: DR781597, DY525646" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98478.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE20291" /db_xref="WormBase:WBGene00082221" /translation="MYHYPVPVAQLIFEMMDSIELFELSRLSRKLEGKIKEAGVRCIK HSVSFSKIPSMRLDFRSENQLEFIFNQPFPRDVKIRTGEIKGLKFFYSAISEKTINVC LEDKSLFGGLYRFYDHFADIFRTTMIGQLDIDVNTIKNVIGLLGIPEFKRCQTLQLIG DKMADEDAKYIQDNCQIYETLSLNGKVGRRDQHYKLYEIKNLIIRQNDWININDLFLM KCENIYIDGANISDLDLINFVKMWKNGESNSHLKTLHVNFTGSSVFDRSQLQYFVPVL PVFHYNPAAPNVPVEREEGSDDSDSSDDEDELAQDQAIKEQRRIAYDNQLHQMEQTLP WKEIGRSLIDYSSHSNIFRRGERNYSQLIGESDIIELDCFYRDVVKFDGTFASIRIHQ KSFKMIVWHNFELPP" gene complement(<92769..>94238) /locus_tag="CRE_20292" /db_xref="WormBase:WBGene00061651" mRNA complement(join(<92769..92956,92986..93139,93182..93316, 93362..93559,93891..>94238)) /locus_tag="CRE_20292" /product="hypothetical protein" /db_xref="WormBase:CRE20292" /db_xref="WormBase:WBGene00061651" CDS complement(join(92769..92956,92986..93139,93182..93316, 93362..93559,93891..94238)) /locus_tag="CRE_20292" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98591.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE20292" /db_xref="WormBase:WBGene00061651" /translation="MLENEDKEGNTQTDFNFPCDFLDDFDEEKQPNLTRKTTKKDINL LINFIGGFEKWSFLDEDCRIEVIKLLDYKSRVNISVCSKLDYEIVKKVPLKVDKIEIK DNEKNHYSLSSEEFANYPIEQSIIRSLPCCKYLRIGADSMDHFRWWLEKVPENLIDVS LSPVNIDPHSFILSPEILSLPQIMNALQFSFRGISAFTDDQLVHLKAKIISFDCVNIT DDGINQFIKNWVSGKSVFDFKQLLLWSSQVRDLSRITRGLEMRPWDDDFRKEAFVFKH FNDVDSVMISIVVVEVDCYFKFRDKSRQSLTLCISDDCTSIYATGKRMTWGGNTYTNY SIPSLL" gene <94758..>95334 /locus_tag="CRE_20192" /db_xref="WormBase:WBGene00082223" mRNA join(<94758..94784,94829..95137,95263..>95334) /locus_tag="CRE_20192" /product="hypothetical protein" /db_xref="WormBase:CRE20192" /db_xref="WormBase:WBGene00082223" CDS join(94758..94784,94829..95137,95263..95334) /locus_tag="CRE_20192" /note="contains similarity to Interpro domain IPR000583 (Glutamine amidotransferase, class-II)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98491.1" /db_xref="InterPro:IPR000583" /db_xref="WormBase:CRE20192" /db_xref="WormBase:WBGene00082223" /translation="MCGIVALVQLFISSVITINLMILCKKKKTNQVSNQNMNPEPVPI PYDSKTESNSAMSPSKGAATSATPAPKTTSLAVKPTSLMVPIAPPPEESQNKTIEKKG EVREKEKKMEKSLNSAFNDRLKEDQSAGVSELV" gene complement(<95658..>103579) /gene="Cre-nca-2" /locus_tag="CRE_20293" /db_xref="WormBase:WBGene00061652" mRNA complement(join(<95658..95900,96095..96262,96309..96471, 96520..96793,96842..97071,97127..97379,97513..98026, 98082..98414,98459..98806,98993..99128,99174..99350, 99402..99792,99838..100123,100169..100306,100353..100603, 100648..100891,101052..101246,101294..101714, 101806..101918,101964..102292,102728..102898, 103573..>103579)) /gene="Cre-nca-2" /locus_tag="CRE_20293" /product="CRE-NCA-2 protein" /db_xref="WormBase:WBGene00061652" CDS complement(join(95658..95900,96095..96262,96309..96471, 96520..96793,96842..97071,97127..97379,97513..98026, 98082..98414,98459..98806,98993..99128,99174..99350, 99402..99792,99838..100123,100169..100306,100353..100603, 100648..100891,101052..101246,101294..101714, 101806..101918,101964..102292,102728..102898, 103573..103579)) /gene="Cre-nca-2" /locus_tag="CRE_20293" /note="contains similarity to Pfam domain PF00520 Ion transport protein; contains similarity to Interpro domain IPR005821 (Ion transport)" /codon_start=1 /product="CRE-NCA-2 protein" /protein_id="EFO98541.1" /db_xref="InterPro:IPR005821" /db_xref="PFAM:PF00520" /db_xref="WormBase:CRE20293" /db_xref="WormBase:WBGene00061652" /translation="MFCLSACRAAALSTTMLTRRKSSIDGTKSERSRRRGESIGGAFT DMINIEPTSIINKSTELLHERFLRDMVRAACLLSMISLCLHTPETIKMWPPLNYIILV NDVIVTLIFIGEAAVTINQNGLFDNQNSYLRDRWYQFEFFLLINHILSCIIHIYELCS IWFPSLNFVYYPWLGALRSARPFIFLRFIRSIVRFKLPKNRIKSIMKRSSQQIQNVTI FFMFFVFSYAIMGVQLFGRLNYHCVVNGTDPNNVTIADLAIPDTMCSQKGAGGYECPG NMVCMRLQLKPQEEGFYGQFSDFASSLFTVYLAASQEGWVYVLYDCLDSLPSFLAFFY FVTLIFFLAWLVKNVFIAVITETFAEIRVQFNEMWQTREATSDHVYTQKLEKDEDGWK LVEVDKYNRAHSNNSLYLHTIVTSTAFQTVMQLMILANAIFHATFVFYHDESDQIRKV WYYYVEVGFTILFNTEVIIKIYAFGWKAYIARGQHKFDCLLCIGSSLNAIWILYETNI FTYFQVFRIARLIKASPMLEDFVYKIFGPGKKLGGLVIFTGILLIVTSAISLQLFCYV PKLNKFTNFAVAFMSMFQIITQEGWTDVVIEILRACNEQAVPFVAIYFVAYHLLVTLF VLSLFVAVILDNLEMDEELKKVKQLKAREQDTIKTTLPMRLRIFNRFPTAPTMVTMKK VSSEFPLPKIRDSFTRQFADEFVETSDDTIQEIGLKVRSMLSGKGPSKETRKTTTIRH VGQLSNKTILTSMLTESNRNRALFSESNQHLANFTRSNTSSKHGKSGILSANSRSRTR GLASLKGKNMVEGFKENGDLRPEDTARKVEKHGEIDFKALQMKRAHAEITRNRIEEEM RENHPMFDRPLFLVGRESSLRRMCQMIAHSRHSYDQNDGQHRKHSNKYKQFHDFLAII TYLDWAMVLVTTLSCCSMLWESPWPTTGENLIFNNFYLQIAEYIFVLVMSFELVVKCI ANGLFFTPKALVTDVGDILTIFIYIVSCFILSFPLIVITFQTSLIFVIWMPNHIEINS WAQLLMICRASRPLRVYALIPHIRRVVVELCRGFREILLVTILLVVLMFIFASFGVQL VGGKLASCNDPMITTRENCTGLYDVKLFVTRMEVYGKHDNAMHPSIVVPRVWTNPRNF NFDHIGNAMLALFETLSYKGWNVVRDILYLRHGAWAVLFIHIYVFIGCMIGLTLFVGV VVANYTENRGTALLTVDQRRWHDLKARLKMAQPLHVPPKPPESAKLRCYLYDLTTSRW FKQLFAALVVLNSFTLVIPWNVSEEQDRKTFLLSLTVISAICNILFTLECLLKMIAFT LSGFWQSRRNRIDFIITILGINWIVFHFLFQLPAYFAGGIKEWKRLTYTYGYLVVILR FFTIAGRKSTLKMLMLTVVMSMVRSSFIIAAMFLLVLFYANAGVVLFGMVKYGQAVGK HVNFRNGREALVVLFRSVTGEDWNDIMHDCMRAPPFCNWHPGLSYWQTDCGNYVGAIV YFCSFYLIITYIVLNLLVAIIMENFSLFYSSEEDALLSYADIRNFQLVWNMVDTEQKR SIPVRRVKFLLRLLKGRLEVTGEDDGLLFKHMCHEMERLHNGDDVSFHDVLNMLSYRS VDIRKNLQLEELLQREELEYIIEEEVAKHTIRTWLENCLKNIKARQNNTLGKMSSIGS TFAFPQSQDLLTKGVVLTEASPDEESLQGDKGSGKKKASRGNSITEIVTEAQKKSVKR GAEKIKERRGTLRQMQMGTYDELEEVEEDEDTDAEIRRSSFEYSGVDMIQMSHEKQLE DVKTWWTLCD" gene <108545..>109883 /locus_tag="CRE_20193" /db_xref="WormBase:WBGene00082240" mRNA join(<108545..108601,108655..108761,108863..109004, 109095..109198,109294..109512,109730..>109883) /locus_tag="CRE_20193" /product="hypothetical protein" /db_xref="WormBase:CRE20193" /db_xref="WormBase:WBGene00082240" CDS join(108545..108601,108655..108761,108863..109004, 109095..109198,109294..109512,109730..109883) /locus_tag="CRE_20193" /note="contains similarity to Interpro domain IPR003347 (Transcription factor jumonji/aspartyl beta-hydroxylase); coded for by the following C. remanei cDNAs: DR776584" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98606.1" /db_xref="InterPro:IPR003347" /db_xref="WormBase:CRE20193" /db_xref="WormBase:WBGene00082240" /translation="MKILILLTFLPSFLLASIEDGGWTTEEKDVVPQKEKCNIERHDA KELTQKEFLKRYAYSEPVIIYNVENEEFKKLTEKQEMLSTWHDVDVTLNSANTYSYTR VPTTFGNYIEEKMKPQNLEMLGNETLYLFGDIDQKTWKPLLEKYNQPEWQLPGHSAAL SFGIAGAGTGVPFHFHGPGFAEVIHGSKRWFLYPYEERPNWNPDKTTLEWYTYDYPKL SREELPLECEMKPGELIYFPDKWWHATLNIQSSVFISTFLSP" gene <110177..>111283 /gene="Cre-vps-22" /locus_tag="CRE_20194" /db_xref="WormBase:WBGene00061653" mRNA join(<110177..110239,110287..110363,110407..110513, 110561..110634,110681..110787,110835..111023, 111091..>111283) /gene="Cre-vps-22" /locus_tag="CRE_20194" /product="CRE-VPS-22 protein" /db_xref="WormBase:WBGene00061653" CDS join(110177..110239,110287..110363,110407..110513, 110561..110634,110681..110787,110835..111023, 111091..111283) /gene="Cre-vps-22" /locus_tag="CRE_20194" /note="contains similarity to Pfam domain PF04157 EAP30/Vps36 family; contains similarity to Interpro domains IPR007286 (EAP30), IPR016689 (ESCRT-2 complex, Snf8); coded for by the following C. remanei cDNAs: DT934934" /codon_start=1 /product="CRE-VPS-22 protein" /protein_id="EFO98572.1" /db_xref="InterPro:IPR007286" /db_xref="InterPro:IPR016689" /db_xref="PFAM:PF04157" /db_xref="WormBase:CRE20194" /db_xref="WormBase:WBGene00061653" /translation="MATRRRIGVAAIQKKQETANKFAAKGDQMAGEQLVQFSQQLDQL SAGLEMFAQKHRDEIKKNSQFRRYFQEMCSSVGVDPLASSKGFWAKALGFGDFYYELG IQIVEICLSTTHINGGIMTVEEIRNRLMRTRSRTRKDTISTDDILRAVDKLKVLGNGF ELVPLGGGRFLVQSVPGELSMDHSRVLQLAEDAAYVTKELIIDKLRWDEPRATSALEH LVKEGLAWTDEQASDTTQYWFPSLFLQQYCHSSSSTSVSESLHSMSFNNYQ" gene <111587..>112670 /locus_tag="CRE_20195" /db_xref="WormBase:WBGene00061654" mRNA join(<111587..111634,111685..111817,111863..111946, 111994..112096,112143..112478,112523..>112670) /locus_tag="CRE_20195" /product="hypothetical protein" /db_xref="WormBase:CRE20195" /db_xref="WormBase:WBGene00061654" CDS join(111587..111634,111685..111817,111863..111946, 111994..112096,112143..112478,112523..112670) /locus_tag="CRE_20195" /note="contains similarity to Pfam domain PF08241 Methyltransferase domain; contains similarity to Interpro domain IPR013216 (Methyltransferase type 11); coded for by the following C. remanei cDNAs: DR782451" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98553.1" /db_xref="InterPro:IPR013216" /db_xref="PFAM:PF08241" /db_xref="WormBase:CRE20195" /db_xref="WormBase:WBGene00061654" /translation="MASFKVKPEHSGPPELYYNETEAAKYASNSHITAIQHEMAERAL ELLALPEDKTCFLLDIGCGTGMSSEVILDAGHMFVGVDVSRPMLEIARQDEDLETGDF VHQDMGLGMPFRPGSFDGAISISAIQWLCHANSSNENPRKRLLFFFQSLYGCLGRGSR AVFQFYPENDEQCDLIMGQAHKAGFNGGLVVDFPEAAKRKKVYLVLMTGGVVQLPQAL TEDGGEGRTQIDNAGRRFVWNSRKQEKVVKGSKAWIEAKRQRQIKQGRDVRHESKYSG RKRKTKF" gene complement(<113245..>115016) /gene="Cre-flh-2" /locus_tag="CRE_20294" /db_xref="WormBase:WBGene00061655" mRNA complement(join(<113245..113355,113427..113528, 113635..113865,113915..114166,114225..>115016)) /gene="Cre-flh-2" /locus_tag="CRE_20294" /product="CRE-FLH-2 protein" /db_xref="WormBase:WBGene00061655" CDS complement(join(113245..113355,113427..113528, 113635..113865,113915..114166,114225..115016)) /gene="Cre-flh-2" /locus_tag="CRE_20294" /note="contains similarity to Pfam domain PF04500 FLYWCH zinc finger domain; contains similarity to Interpro domain IPR007588 (Zinc finger, FLYWCH-type)" /codon_start=1 /product="CRE-FLH-2 protein" /protein_id="EFO98647.1" /db_xref="InterPro:IPR007588" /db_xref="PFAM:PF04500" /db_xref="WormBase:CRE20294" /db_xref="WormBase:WBGene00061655" /translation="MVGTMTSTNQEVVTTATAVAPPIFPPAGSNNNNNNNELAALANL DGVQKQIVAGLLRQQPTIVQAAVSGSISPKIEQDIDFATFIQVRTTVPSKLNDNSFMF QTIQAYQGNQNGSLAGLNTISFHMDSSAPGNTTLITEETRRSASSSPSSPPAAVPNSG VSTGVSTSTTIHEPEYKPRNIREKVYADGYIMSFDKKSCCGTKFFWRCERKNDCNARM HSDIATREIVRKLHPHNHEKPSPEELAFYEQDFSSLDPNYCHPVKSINRSYMQRKLSR ASHIVSQTQQNSQLPEPMEIDTNQTIQQLQHNNNLMLFASAVAAAASAGVSPPTSVGQ KRISSSVLPIQIKSPRLIKKEEEETFPQTITTEELRTTYEITRKLMKMMKPKTEIGVR WKGDEDALLLFLSNDNGAEENVFLPVVVMNRNEKSLVAALEGFTGKRCEGSIALSYSQ RVNVLVHEALICNWTHGKLFLVNSDSMALWRLTPVDAFGDPLNQG" gene complement(<121039..>122359) /locus_tag="CRE_20295" /db_xref="WormBase:WBGene00082218" mRNA complement(join(<121039..121085,121132..121307, 121354..121637,121714..121965,122012..122162, 122280..>122359)) /locus_tag="CRE_20295" /product="hypothetical protein" /db_xref="WormBase:CRE20295" /db_xref="WormBase:WBGene00082218" CDS complement(join(121039..121085,121132..121307, 121354..121637,121714..121965,122012..122162, 122280..122359)) /locus_tag="CRE_20295" /note="contains similarity to Pfam domain PF04078 Cell differentiation family, Rcd1-like; contains similarity to Interpro domain IPR007216 (Cell differentiation proteins, Rcd1-like); coded for by the following C. remanei cDNAs: DR407913, DR408314" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98468.1" /db_xref="InterPro:IPR007216" /db_xref="PFAM:PF04078" /db_xref="WormBase:CRE20295" /db_xref="WormBase:WBGene00082218" /translation="MIDARASPATQAQQTAVPSSANLEINTDEIMQWIIDLRDPTKRE LALLELSKKRDSVPDLPLWLWHSFGTMSALLQEVVAIYPAIMPANLTAAQSNRVCNAL ALMQCVASHRETRGPFLHAHIPLYLYPFLHTTKISRSFEYLRLTSLGVIGALVKTDDK EQLLVVINFLLSTEIIPLCLRIMEQGTELSKTVATFILQKILLDDTGLLYICQTYERF SHVAMILGKMVMKLTREPSVRLLKHVVRCYSRLSDNPSLTLDARVAQGGAGQNVKVRA QQALKQCLPDQLKDLTFKTLLKEDPSTMNWLRQLLTNLEIDGAILHDEELLPK" gene complement(<122778..>127094) /gene="Cre-rpb-2" /locus_tag="CRE_20296" /db_xref="WormBase:WBGene00061656" mRNA complement(join(<122778..122927,122977..123186, 123244..123489,123557..123796,123937..124479, 124551..124790,124869..125157,125204..125628, 125716..126021,126066..126887,126942..>127094)) /gene="Cre-rpb-2" /locus_tag="CRE_20296" /product="CRE-RPB-2 protein" /db_xref="WormBase:WBGene00061656" CDS complement(join(122778..122927,122977..123186, 123244..123489,123557..123796,123937..124479, 124551..124790,124869..125157,125204..125628, 125716..126021,126066..126887,126942..127094)) /gene="Cre-rpb-2" /locus_tag="CRE_20296" /note="contains similarity to Pfam domains PF04566 (RNA polymerase Rpb2, domain 4), PF04561 (RNA polymerase Rpb2, domain 2), PF04567 (RNA polymerase Rpb2, domain 5), PF04565 (RNA polymerase Rpb2, domain 3), PF00562 (RNA polymerase Rpb2, domain 6), PF04560 (RNA polymerase Rpb2, domain 7), PF04563 (RNA polymerase beta subunit); contains similarity to Interpro domains IPR007120 (DNA-directed RNA polymerase, subunit 2, domain 6), IPR007641 (RNA polymerase Rpb2, domain 7), IPR007644 (RNA polymerase, beta subunit, protrusion), IPR015712 (DNA-directed RNA polymerase, subunit 2), IPR007645 (RNA polymerase Rpb2, domain 3), IPR007642 (RNA polymerase Rpb2, domain 2), IPR014724 (RNA polymerase Rpb2, OB-fold), IPR007646 (RNA polymerase Rpb2, domain 4), IPR007647 (RNA polymerase Rpb2, domain 5), IPR007121 (RNA polymerase, beta subunit, conserved site)" /codon_start=1 /product="CRE-RPB-2 protein" /protein_id="EFO98559.1" /db_xref="InterPro:IPR007120" /db_xref="InterPro:IPR007121" /db_xref="InterPro:IPR007641" /db_xref="InterPro:IPR007642" /db_xref="InterPro:IPR007644" /db_xref="InterPro:IPR007645" /db_xref="InterPro:IPR007646" /db_xref="InterPro:IPR007647" /db_xref="InterPro:IPR014724" /db_xref="InterPro:IPR015712" /db_xref="PFAM:PF00562" /db_xref="PFAM:PF04560" /db_xref="PFAM:PF04561" /db_xref="PFAM:PF04563" /db_xref="PFAM:PF04565" /db_xref="PFAM:PF04566" /db_xref="PFAM:PF04567" /db_xref="WormBase:CRE20296" /db_xref="WormBase:WBGene00061656" /translation="MIYDKKMMFEEDDDMENVPMEGDYNDETDEISAEAWQEACWVVI SAYFDEKGLVRQQLDSFDEFVQMNVQRIVEDSPPVELQSENQHLGNDMENPAKFSLKF NQIYLSKPTHWEKDGAPMPMMPNEARLRNLTYASPLYVDITKVVTRDDSVNEKVYEKV FVGKVPVMLRSSYCMLSNMTDRDLTELNECPLDPGGYFVINGSEKVLIAQEKMATNTV YVFSMKDGKYAFKTECRSCLENSSRPTSTMWVNMLARGGGGGKKTAMGQRIIGILPYI KQEIPIMIVFRALGFVSDRDILGHIIYDFDDPEMMEMVKPSLDEAFVIQEQNVALNFI GARGAKPGVTREQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGR RELDDRDHIGNKRLDLAGPLLAFLFRALFRNLLKEKMITSCIQMRMTAQKYINKNDDF ALDVCVKTSTITRGLAYSLATGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANS PIGREGKLAKPRQLHNTQWGMVCPAETPEGQAVGLVKNLALMAYISVGSLPEPILEFL EEWSMENLEEVSPSAIADATKIFVNGAWVGIHREPDQLMTTLKKLRRQMDIIVSEVSM VRDIRDREIRIYTDAGRVCRPLLIVEDQKLALRKRHIDQLKDIDEANKYTWSDLVGGG VVELIDSMEEETSMIAMMPEDLRSGVYCDTHTHCEIHPAMILGVCASIIPFPDHNQSP RNTYQSAMGKQAMGVYTTNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFNELPAGINA IVAILSYSGYNQEDSVIMNNSAIDRGLFRSVFYRSYRDNEANLDNANEELIEKPTREK CSGMRHSLYDKLDEDGIISPGMRVSGDDVIIGKTVALPDIDDDLDATGKKYPKRDAST FLRSSETGIVDQVMLSLNNDGNKFVKIRMRSVRLPQIGDKFASRHGQKGTMGIMYRQE DMPFTAEGLTPDIIINPHAVPSRMTIGHLIECLQGKLSANKGEIGDATPFNDTVNVQK ISGLLCEYGYHLRGNEVMYNGHTGKKLTTQIFFGPTYYQRLKHMVDDKIHSRARGPIQ MMNRQPMEGRARDGGLRFGEMERDCQISHGATQFLRERLFEVSDPYHVYVCNNCGLIV VANLRTNSFECKACRNKTQVSAVRIPYACKLLFQELMSMSIAPRLMVKPQQPKRAKHQ TEA" gene complement(<127707..>128989) /gene="Cre-fsn-1" /locus_tag="CRE_20297" /db_xref="WormBase:WBGene00061657" mRNA complement(join(<127707..127892,127972..128119, 128172..128791,128903..>128989)) /gene="Cre-fsn-1" /locus_tag="CRE_20297" /product="CRE-FSN-1 protein" /db_xref="WormBase:WBGene00061657" CDS complement(join(127707..127892,127972..128119, 128172..128791,128903..128989)) /gene="Cre-fsn-1" /locus_tag="CRE_20297" /note="contains similarity to Pfam domains PF00622 (SPRY domain), PF00646 (F-box domain); contains similarity to Interpro domains IPR001870 (B302, (SPRY)-like), IPR001810 (Cyclin-like F-box), IPR001680 (WD40 repeat), IPR003877 (SPla/RYanodine receptor SPRY)" /codon_start=1 /product="CRE-FSN-1 protein" /protein_id="EFO98632.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR001870" /db_xref="InterPro:IPR003877" /db_xref="PFAM:PF00622" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE20297" /db_xref="WormBase:WBGene00061657" /translation="MAENEDETIVPDDQCNLAASTPMKSSDLDNVESPKERKTSVAKC DGEGNPPPGSPGGSPPQLTPCSIPPRRRRSPRRPEVSASRLPLKVLNKIFQYLSLKGK NFFNEHFLPYFIDLRSAMLTCHSWNNALAMEDSDIWQQLLSLKLPEAAVVDPFLFAEL GSARKKLRAWYYAWNTDDISRNNYVRTNGFTVHRQPVAQSTDGVRGKRGVSQGVHAFD ITWDGPLGTVAVVGFATKHAALQCAGYIALLGSDDQSWGWNLVDNVLMHNGTQLGVYP KMNNPPKYEVGEKIRLVVDCEKHVAYFERNSEFLGIAFSHIPPLRLYPAVCAVYGNTE VTMVYVGSPQMG" gene complement(<129298..>131048) /locus_tag="CRE_20298" /db_xref="WormBase:WBGene00061658" mRNA complement(join(<129298..129522,129627..129740, 129792..129956,130055..130182,130268..130656, 130858..>131048)) /locus_tag="CRE_20298" /product="hypothetical protein" /db_xref="WormBase:CRE20298" /db_xref="WormBase:WBGene00061658" CDS complement(join(129298..129522,129627..129740, 129792..129956,130055..130182,130268..130656, 130858..131048)) /locus_tag="CRE_20298" /note="contains similarity to Pfam domain PF00297 Ribosomal protein L3; contains similarity to Interpro domain IPR000597 (Ribosomal protein L3); coded for by the following C. remanei cDNAs: DT934009" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98525.1" /db_xref="InterPro:IPR000597" /db_xref="PFAM:PF00297" /db_xref="WormBase:CRE20298" /db_xref="WormBase:WBGene00061658" /translation="MLRSLISSATTGPTQEWAGRILLANSGYISQQRGRRRTLTPVPW LPPIKEHIPKNSFDLSQKTKNLLDDVIKKETLAASALARNDSQETNVAIIDIPHSSRR VGLVVRKIGMLPQWTNDGNRILCTVLEVDENHVVSVTSPDSWYKASAVGKRKAFNRHG PMWRVTVGAGNDDPTKYTLAYRRQFARAGVPTKEKLGCFLVTEDALPHAGQPLDARHF AVGQHVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRM PGHMGYEWRTVSGLEIVRINNDKQVIYVKGSVPGDIGETLLLKDCLQDEKRLKSGPVP TWAPTLETIQEESELSPEEIVVPKNLLFNETFSSKLFRFTSPSIVFTDADAKRATGRD KTKAKIAKVKK" gene complement(<131614..>134417) /locus_tag="CRE_20299" /db_xref="WormBase:WBGene00082219" mRNA complement(join(<131614..131820,131988..132587, 132717..132932,132978..133030,133112..133500, 133609..133751,133795..133894,133941..134020, 134064..134295,134344..>134417)) /locus_tag="CRE_20299" /product="hypothetical protein" /db_xref="WormBase:CRE20299" /db_xref="WormBase:WBGene00082219" CDS complement(join(131614..131820,131988..132587, 132717..132932,132978..133030,133112..133500, 133609..133751,133795..133894,133941..134020, 134064..134295,134344..134417)) /locus_tag="CRE_20299" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98472.1" /db_xref="WormBase:CRE20299" /db_xref="WormBase:WBGene00082219" /translation="MSVINPSVILKSDGQLTGQADDETPQQSSKTMTRETNITKKYNC SKQNTNKKKSSKKMVKLDSLPKTINSKSSQKTHSMREFETVFKLNGVVSTSHILDFDT MSLHPGDVIIDSDDTEDENNSKKTGTIQSPHDSDELKHYSKLLRDLKKLGSNRQQTNK SMVNRQFVSKPRKIIEGDTPQRPYPKDLCGYDKHECGTATEIFDMIFRKKNDSDHCSL TNLNLSAVVEHCDQLVKKRQAVLESYTGITEESRNRKKRLEILLNLQEILWLIHFGKF DDALEKTFRLMILKFNCRFDKDKRLKLIKNNELSLVWNRFIELENSSIMCQRETDWKL RPVFIDGLAYLAMFSSSTEFSLPNMQTRTLLEILIHFILDGHKTVLYLPSFYENAHDH VDDIDAFQFLINSKLIRFVNERNRKFVTKQVLEEAEKTHGIVVSPMENLTCLNSIHCF PTVRKSSSKIDEFLLVTCFKESSSINEKFEYEVDRTTASIFSKAVGLSGNDSDIDDKK EQGEDHSSASFEETVHAESTESNLVLEMPESCSLLFEDSEKSDINELNKNETSSISDE LVNNKFSHSPIAATSNTETGLDSGVGVDISDEAVLLGRNCVDPETAMQETLGDSETYQ DLARKISSFTYLAKFNFGRSRQIKVFLRLIAQFTPELLPHFLQKSAIFEVGTAIENLK NEQDLTVWPIFSVLD" gene <135312..>136837 /locus_tag="CRE_20196" /db_xref="WormBase:WBGene00061659" mRNA join(<135312..135445,135492..135591,135650..136106, 136159..136330,136375..136498,136601..>136837) /locus_tag="CRE_20196" /product="hypothetical protein" /db_xref="WormBase:CRE20196" /db_xref="WormBase:WBGene00061659" CDS join(135312..135445,135492..135591,135650..136106, 136159..136330,136375..136498,136601..136837) /locus_tag="CRE_20196" /note="contains similarity to Pfam domains PF01018 (GTP1/OBG), PF01926 (GTPase of unknown function); contains similarity to Interpro domains IPR014100 (GTP-binding protein Obg/CgtA), IPR006169 (GTP1/OBG subdomain), IPR002917 (GTP-binding protein, HSR1-related), IPR006073 (GTP1/OBG)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98635.1" /db_xref="InterPro:IPR002917" /db_xref="InterPro:IPR006073" /db_xref="InterPro:IPR006169" /db_xref="InterPro:IPR014100" /db_xref="PFAM:PF01018" /db_xref="PFAM:PF01926" /db_xref="WormBase:CRE20196" /db_xref="WormBase:WBGene00061659" /translation="MRLSGVLRETISQVQKLIKDDLNILKVDKYIVNVKAGMGGAGLA RYDGVGGNGGDVYFVAKPNLAFSDIKKRLKSKMNIRADNGEAATKISLIGQHAKHQYF DVPIGIEVVNRENNSLISRCSKPFRRYLIARGGQGGYAKLNYKCVLFIYCSINFLFRG TKGDIFDVELHLKLRPNIGLLGFPNAGKSTLLKALVPEKSVKIADYAFTTVNPQVAFY KNETNNDGFNLEDPPYTLSVADLPGIIEGASKNRGRGYQFLKHLEYADIIVMVIDSQG FQLKNELDCPFRNALESVSLLNKEVELYDQRLARKPIVCVLNKVDALNEEKKKQINAL ALSLQSQKWIDNVSEELRPNTPMRFEHVVQLSAKSGKIKEFRKVLNIMKHHLHELKDV KEDPMESQNKRKVYI" gene <137367..>143629 /gene="Cre-set-2" /locus_tag="CRE_20197" /db_xref="WormBase:WBGene00082227" mRNA join(<137367..137432,137485..137622,137740..137981, 138062..138234,138381..138632,138687..138875, 138977..139098,139563..139730,140004..140906, 140971..141219,141398..142390,142435..142653, 142697..143023,143074..143394,143474..>143629) /gene="Cre-set-2" /locus_tag="CRE_20197" /product="CRE-SET-2 protein" /db_xref="WormBase:WBGene00082227" CDS join(137367..137432,137485..137622,137740..137981, 138062..138234,138381..138632,138687..138875, 138977..139098,139563..139730,140004..140906, 140971..141219,141398..142390,142435..142653, 142697..143023,143074..143394,143474..143629) /gene="Cre-set-2" /locus_tag="CRE_20197" /note="contains similarity to Pfam domain PF00856 SET domain; contains similarity to Interpro domains IPR001214 (SET), IPR003616 (Post-SET zinc-binding region), IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000834 (Peptidase M14, carboxypeptidase A), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="CRE-SET-2 protein" /protein_id="EFO98512.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR000834" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR003616" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00856" /db_xref="WormBase:CRE20197" /db_xref="WormBase:WBGene00082227" /translation="MSTREPAAPFTKSRKSHLKHEKPNSSNNSQKIESHKCKSAWQKI FEPGKVIIRIDGVPPKSCSQEEFNRIKCVGVNKIDKNLADPRKLPDNMRDTIYQELII RSSNRRYLPRPRLRVDSNYCTIPPKREVSLFSMDDNCTIALLKDFAESCGEVEKAYVC MHPESNRHMKMAYVVFKTAKDATIFTNKYESQNLLATRCVCQIDPFLSSLNEAYENAT NGRVLPILPEDLASIDSKVLRELRANYLRGKNEKEVEGKGEDSVMEICSTSHFIETTD DRVEPPDYQIVMDVEVSPENTSSNPPPPLKQESPPPPPPPKPFQNPLILSDTIVQPPY YSHIPPSSSTMHMPEFCPTDTELESNIPLPRGEYNQKENLIISNTKVGTEMDEYGGND DINHLHLILAKIPIGVGVAHRTLVDDIVLEVPQKGMNIRNAVPAEGIIDDQIRGPGLA KRSSSPSTSKKDRSFGWDSDTDESDDGTRKRRGGRSKTRDSERRSRKLGSSQSSRRNL SNSHNHSAPNLEYQKTPPPPPPNFIPNQSHPIQVRNPFHEHSQNHRLPTPHIIPGQYY PIPHHPPLGVLPPMMVPPPIRNQAQPPCDFRQPPPGFVPSFTQTYPSTRILHASHSIT QIPYQAPHLPKPGLVQISSLSAVPDTAACIPGPPLGHPPVVNEIPRRSETPEKPTPSL QQRFSELFGGAQKKEETQPIEVEYEYALKNSESQDDRQSLEDMDVEVSSDGETTSIVE RTECMEEKRRQELSRLNELKPPLIFECHEKITNDLTSKIYDDIRQQITRQCMAHLDEK LRLKAIADEEKRKQERDQKAQEALKKPSNNSIADMMKQKPIPKSNISRKEHHHHRDKT SSPTHSTSSSEEFHDAQISRRSSVSSSSESSESLSDDSSSEKNDSCRTRKELVLSDEE RIRRMSFSSTSVRSSPTRSHRELSSSSELSEGSASSSRQSRERSRKRKLIASSRESSI SIVSNRSTLEFQQEHEDDEEPPNKKSPQEYFSGDLQTSPDESTNHTLPAVPENIVSSG PLILDSEYLKYEIVHWEKANIAATSRVSGSIRVEEYHPFTTEHCYFKIENKKQSDIQI FEKYPILNEGQKAPIISPAPWGSSPTVNIDESGPLVYMDSIVVNKKPKAASPQKRQKP RKQTFEKDYYMFEDIETIKPLPPRAKKIFRTRTANEKDQIIKDFVGLPDLEDQWYLRH VLNELQSNMPPDELPWRKLLTFKEMLKPDEPILKFFFQINPIRSKKGLPDAFYEDPEL DGVIPVAEGCARARPYKKMSMKQKRSLVRRPENESSVSTAIFSERDETAMRHQHLANK DMRLLQRRLLTSLGDASNDFFKINQLKFRKKMIKFARSRIHGWGLYAMETIAQDEMIV EYIGQTVIVFQNFSSILFHLQIRSLVADEREKAYERRGIGSSYLFRIDENSVIDATKR GNFARFINHSCQPNCYAKVLTIEGEKRIVIYSRSVINKGEEITYDYKFPIEDDKIDCL CGAKACRGYLN" gene <144244..>145255 /gene="Cre-mmab-1" /locus_tag="CRE_20198" /db_xref="WormBase:WBGene00061660" mRNA join(<144244..144373,144420..144671,144726..144948, 145120..>145255) /gene="Cre-mmab-1" /locus_tag="CRE_20198" /product="CRE-MMAB-1 protein" /db_xref="WormBase:WBGene00061660" CDS join(144244..144373,144420..144671,144726..144948, 145120..145255) /gene="Cre-mmab-1" /locus_tag="CRE_20198" /note="contains similarity to Pfam domain PF01923 Cobalamin adenosyltransferase; contains similarity to Interpro domain IPR002779 (Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase)" /codon_start=1 /product="CRE-MMAB-1 protein" /protein_id="EFO98607.1" /db_xref="InterPro:IPR002779" /db_xref="PFAM:PF01923" /db_xref="WormBase:CRE20198" /db_xref="WormBase:WBGene00061660" /translation="MIRNCLRLISEPTNILINGPSSGFIQNRSFSLTTMNLGRGFKQG RGTGDSGQSSLYNNERRWKDDDSFNALGATDELSSFLGVCGASAQNDGEMNDVVETLT RLQCCLQDVGAHLATPPKNSSERKQKKTAFDVSMVEWINAEIDRYGDELPGIRQFILS GGGVTSANLQYARAVCRRAERCVVPLIREENVDPMALKFLNRMSDLLFVLGRTACMRN KNEELTYLRPDSFTNMKWDRKSLHDKKK" gene <145455..>147396 /gene="Cre-ula-1" /locus_tag="CRE_20199" /db_xref="WormBase:WBGene00061661" mRNA join(<145455..145578,145629..145965,146015..146104, 146150..146259,146327..146511,146563..>147396) /gene="Cre-ula-1" /locus_tag="CRE_20199" /product="CRE-ULA-1 protein" /db_xref="WormBase:WBGene00061661" CDS join(145455..145578,145629..145965,146015..146104, 146150..146259,146327..146511,146563..147396) /gene="Cre-ula-1" /locus_tag="CRE_20199" /note="contains similarity to Pfam domain PF00899 ThiF family; contains similarity to Interpro domains IPR000594 (UBA/THIF-type NAD/FAD binding fold), IPR016040 (NAD(P)-binding)" /codon_start=1 /product="CRE-ULA-1 protein" /protein_id="EFO98495.1" /db_xref="InterPro:IPR000594" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00899" /db_xref="WormBase:CRE20199" /db_xref="WormBase:WBGene00061661" /translation="MPPSASFDPSYRYDRQVRLWGEEGQASIGTTSACVLGSDSLATE TLKSLVLAGVHSFFVVDDARVEHADLGQNFFLQSDDIGRSRAEATLEKLTELNPSVSG RASCQSPTALAQEDVEKLATFSVVVSANQSESIDTKFAEVLYNIRVPFVCIKSYGLIG TMRICIKEHTIANSHEENPRPDLRLDAPFKTLSEIINETDLNEMTVEQLRHTPYILLH FKALDVFRKHRNNENAFPETTNDRKEIQQILQSFRRSTEHSGTKDSENFDEAKAAVMR AFQKTTIGASVQSILSAAESSDSTQPFWLICEALRRFVKFNNGLLPLRGTLPDMTSDS NRYTRLASVFHEKALLDAQEVLRLTREVEKERGVGDVISDDVCYRFCKNADRIRVQHG ALLDYTRETKECVRKVKEMSIEEQSREEKVDSATWLLLMRAVGRFRKEKGRFPGTNGV PVSIDAQDLKKRVEVLIRESVQVSSRFTDSPISLIFQEEEEIKPILHNVTDSAIAEMC RFGAAELHVISSYVGGIASQEIIKLATNQYVPIDNTFVFDGHSQESSTFKL" gene <147977..>148609 /gene="Cre-rpb-8" /locus_tag="CRE_20200" /db_xref="WormBase:WBGene00061662" mRNA join(<147977..148083,148128..148254,148397..>148609) /gene="Cre-rpb-8" /locus_tag="CRE_20200" /product="CRE-RPB-8 protein" /db_xref="WormBase:WBGene00061662" CDS join(147977..148083,148128..148254,148397..148609) /gene="Cre-rpb-8" /locus_tag="CRE_20200" /note="contains similarity to Pfam domain PF03870 RNA polymerase Rpb8; contains similarity to Interpro domains IPR005570 (RNA polymerase, Rpb8), IPR012340 (Nucleic acid-binding, OB-fold); coded for by the following C. remanei cDNAs: DR406843, DY526651, DY525460" /codon_start=1 /product="CRE-RPB-8 protein" /protein_id="EFO98482.1" /db_xref="InterPro:IPR005570" /db_xref="InterPro:IPR012340" /db_xref="PFAM:PF03870" /db_xref="WormBase:CRE20200" /db_xref="WormBase:WBGene00061662" /translation="MAGIIFDDMFKVKSVDPDGKKFDRVSRYFCDAESFKMELIIDIN SQIYPLKQNDKFRLVLATTLREDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDD TGTDGGKLAAYASFGGLLMRLKGEAINLHGFEVDMNLYLLMKKTDF" gene <148830..>152147 /gene="Cre-rars-1" /locus_tag="CRE_20201" /db_xref="WormBase:WBGene00061663" mRNA join(<148830..148880,149404..149663,149903..150110, 150159..150482,150602..150860,150916..151020, 151077..151308,151353..151611,151655..151985, 152041..>152147) /gene="Cre-rars-1" /locus_tag="CRE_20201" /product="CRE-RARS-1 protein" /db_xref="WormBase:WBGene00061663" CDS join(148830..148880,149404..149663,149903..150110, 150159..150482,150602..150860,150916..151020, 151077..151308,151353..151611,151655..151985, 152041..152147) /gene="Cre-rars-1" /locus_tag="CRE_20201" /note="contains similarity to Pfam domains PF05746 (DALR anticodon binding domain), PF00750 (tRNA synthetases class I (R)), PF03485 (Arginyl tRNA synthetase N terminal domain); contains similarity to Interpro domains IPR015945 (Arginyl-tRNA synthetase, class Ic, core), IPR005148 (Arginyl tRNA synthetase, class Ic, N-terminal), IPR008909 (DALR anticodon binding), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR001278 (Arginyl-tRNA synthetase, class Ic), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold); coded for by the following C. remanei cDNAs: DY528970, DY529612, DY527348, DR778088" /codon_start=1 /product="CRE-RARS-1 protein" /protein_id="EFO98550.1" /db_xref="InterPro:IPR001278" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR005148" /db_xref="InterPro:IPR008909" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR015945" /db_xref="PFAM:PF00750" /db_xref="PFAM:PF03485" /db_xref="PFAM:PF05746" /db_xref="WormBase:CRE20201" /db_xref="WormBase:WBGene00061663" /translation="MSANKELQQGYSAYSTSLDQTSLLNRLIVAMEKGELTDELLEHM PELNEAKKLNDKLKYRMSILEKSIADQTLQNKKNGVKTVIPSSGPNAAPVEKKGKKDG KTGGAPPKQAKKIDYVTVEDYGSSILGRLQSLFKRAISEAFPGLDAPLLLAETPNPQF GDYQCTSAMPIAAKLKINGINKKPADVGKEINAKLPKNIDFIEKIIVMPAGFINIFLK TDYIRSQVSLLASKGISLPKVAKKRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFE SVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLNKLPDISDLQAFYKESKKRFDEDE SFKKRAYECVVKLQSHDGDIVKAWNTICDVSKKYNQIVYDYLDIKIKDVGESFYQDKM VDLVKWIKQNKPDMLREEDGRQIMFPSGCDVPLTVVKSDGGFTYDTSDLAALKYRMLE EKVDWNIYVVDAGQSLHLETVYAAGRDFGWYDESKQRVEHVGFGLVLGDDKKKFKTRS GETVRLLDLLSEGVKRATEKLKEKKREAVMTEEELTTARDAVAFGCVKYADLSHTRTQ DYVFSFDRMLDDRGNTAVYLLYAYARIRSIVRTSGVNDTQLAEYVSNTPVLPLNHPAE LKLAKHLLKLSDCILLVLDSLMLHQVCDYVYQLATLFHDFYNECYVIEKKGDEPPVVH FHRLALCEVTANVISTCFKILGIREVPKM" gene complement(<152408..>154131) /gene="Cre-cee-1" /locus_tag="CRE_20300" /db_xref="WormBase:WBGene00061664" mRNA complement(join(<152408..152601,153006..153156, 153206..153337,153401..153891,153966..>154131)) /gene="Cre-cee-1" /locus_tag="CRE_20300" /product="CRE-CEE-1 protein" /db_xref="WormBase:WBGene00061664" CDS complement(join(152408..152601,153006..153156, 153206..153337,153401..153891,153966..154131)) /gene="Cre-cee-1" /locus_tag="CRE_20300" /note="contains similarity to Pfam domain PF04190 Protein of unknown function (DUF410); contains similarity to Interpro domain IPR007317 (Protein of unknown function DUF410)" /codon_start=1 /product="CRE-CEE-1 protein" /protein_id="EFO98521.1" /db_xref="InterPro:IPR007317" /db_xref="PFAM:PF04190" /db_xref="WormBase:CRE20300" /db_xref="WormBase:WBGene00061664" /translation="MDSSILLRLEEFEKNKKYYDALQFYRTKVTRSFRLKSANEVALA LVKHALDFFFREKQYQCAIDIATQYAECLSKNDVELEASTFELLAESVAKFANFAEIE NVAGNIQQEQLLSTARCRCVDLAIQWYFSLLSSYEHFCDFRTKQKSTNQYEKKYGSAA FHALLAKKLVAVDHFDLAKNHFLLSDDSKSFALFLHNDFEKAHNKEAESDIIIVETVL QVICLDRFPFAVALFNEYVKPNKYPFAKPLLNFQHILFDVIETENQQQLSELTTSYQT ELKRSYALIGYLTKIGKLYFGLRDSQCMNGGLGGLFSGLLGSQKEDETATSHITARTP AREKPASTAQPTSFNPFGAFPPSTANNAIPKKIQKVEMEEDLD" gap 154443..158588 /estimated_length=4146 gene <159264..>161792 /locus_tag="CRE_20202" /db_xref="WormBase:WBGene00061665" mRNA join(<159264..159279,159325..159477,159522..159682, 161281..161441,161517..161667,161709..>161792) /locus_tag="CRE_20202" /product="hypothetical protein" /db_xref="WormBase:CRE20202" /db_xref="WormBase:WBGene00061665" CDS join(159264..159279,159325..159477,159522..159682, 161281..161441,161517..161667,161709..161792) /locus_tag="CRE_20202" /note="contains similarity to Interpro domain IPR012335 (Thioredoxin fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98563.1" /db_xref="InterPro:IPR012335" /db_xref="WormBase:CRE20202" /db_xref="WormBase:WBGene00061665" /translation="MNIFQDLLTSTWTFLQSYGWITVFITILAYVIYNKYIYDFLNTR EENRKLIEQKKFDCQVQDKEQERIRLARKRQQEEHDRKEKEARIKREVKEKEDAEKRL RELEEQDTTCNVLGHASSAHSPIISGLNSTDRKNQHAIDIVESLPGTCDVTVFGYSTC PNFRKVCQLISTYRLDVSHFQVFEFDKQKDWPMEKVLELIKSRFGEKLAPYVSIVFVG GEFIGGLEEARTFDRNHGFSQFK" gap 159756..160389 /estimated_length=634 gene <161977..>163385 /locus_tag="CRE_20203" /db_xref="WormBase:WBGene00061666" mRNA join(<161977..162045,162093..162211,162273..162348, 162400..162621,163111..163189,163276..>163385) /locus_tag="CRE_20203" /product="hypothetical protein" /db_xref="WormBase:CRE20203" /db_xref="WormBase:WBGene00061666" CDS join(161977..162045,162093..162211,162273..162348, 162400..162621,163111..163189,163276..163385) /locus_tag="CRE_20203" /note="contains similarity to Pfam domain PF00023 Ankyrin repeat; contains similarity to Interpro domain IPR002110 (Ankyrin); coded for by the following C. remanei cDNAs: DR407627" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98473.1" /db_xref="InterPro:IPR002110" /db_xref="PFAM:PF00023" /db_xref="WormBase:CRE20203" /db_xref="WormBase:WBGene00061666" /translation="MTDNINDFDAQATAEDGVNLGFTKELIDEIRDKKESNPGMFVSA WQDDNEGLEEKDLENPIEKWLTAAEDGNLELIKTILKEYPTRLDCHDADGYTALHRAS YNNNLEIVEHLLACGANKESRTNEGWTPLLSASNWANFDIVGRLLSNGADVNAVSNGN LSALHLAVNSSEDPDNVYTTVKYLLQAPGIDPGVVAGNGDTPLMMARRTSERLYTSIR DFIERP" gene complement(<163560..>165004) /gene="Cre-rom-1" /locus_tag="CRE_20301" /db_xref="WormBase:WBGene00061667" mRNA complement(join(<163560..163883,163932..164145, 164188..164357,164412..164573,164804..>165004)) /gene="Cre-rom-1" /locus_tag="CRE_20301" /product="CRE-ROM-1 protein" /db_xref="WormBase:WBGene00061667" CDS complement(join(163560..163883,163932..164145, 164188..164357,164412..164573,164804..165004)) /gene="Cre-rom-1" /locus_tag="CRE_20301" /note="contains similarity to Pfam domain PF01694 Rhomboid family; contains similarity to Interpro domains IPR002610 (Peptidase S54, rhomboid), IPR017213 (Peptidase S54, rhomboid, metazoan)" /codon_start=1 /product="CRE-ROM-1 protein" /protein_id="EFO98611.1" /db_xref="InterPro:IPR002610" /db_xref="InterPro:IPR017213" /db_xref="PFAM:PF01694" /db_xref="WormBase:CRE20301" /db_xref="WormBase:WBGene00061667" /translation="MFSSEGKFRKTYRHQFNQLRTGDETEIPMSTLASRIETRKVPLS SGQINAIKEAPDELVDVDGFQRIVTSKAAQKSTIKRLMYDVADPVMSRSQKIEVHSYI DSYSWCPPPIFMFLITMIQVGIFLFYWESDGRKSIWTDCAGCFQHHNHTVPGIFIFAP KLRGEAWRFTSYMFLHAGLNHLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTAGSL LQYAIDPNSLLVGASAGVYALIFAHVANVILNWHEMPFRWIRVLILAVFITFDFGGAL YRRFYADQCDSVSHLAHIAGAVTGIFFGYVVLYNVVEHRIETIIKYVCLALYSSLFVI TIVFVIVREPYSKSLWNDENCK" gene <166403..>167660 /locus_tag="CRE_20204" /db_xref="WormBase:WBGene00061668" mRNA join(<166403..166426,166467..166560,166605..166695, 166737..166851,166897..167208,167251..167370, 167453..167550,167597..>167660) /locus_tag="CRE_20204" /product="hypothetical protein" /db_xref="WormBase:CRE20204" /db_xref="WormBase:WBGene00061668" CDS join(166403..166426,166467..166560,166605..166695, 166737..166851,166897..167208,167251..167370, 167453..167550,167597..167660) /locus_tag="CRE_20204" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98567.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE20204" /db_xref="WormBase:WBGene00061668" /translation="MDGEQALEAKNSAGLNIPCQQCDRTFSSERSLSCHIKVHNDKIL KCCFCEQTFNRTDTLFMHTLDHISKGTLPCCGEGCQIVVESMADGETHAIEKHGSNGV AVIKCKNCPESLPSFRKMLFHHTFKHGELKEFADEMTAKQKEFLRTKKNQNRKDKKTT TGGFGDLKIKMEVEESGGFDSTVVSTEDNKDYVDEDEFKSNSEENGILKQLQIAITGS TESNTEMIGNLSDVIAELFPLTIGDQYQCLHCMMGFTDAILWMTHLGYHDVENPFKCS GCGRMFENRQTFVLHLTYYAHGADVPAQN" gene <167852..>168457 /gene="Cre-kbp-2" /locus_tag="CRE_20205" /db_xref="WormBase:WBGene00061669" mRNA join(<167852..167947,168001..168216,168260..>168457) /gene="Cre-kbp-2" /locus_tag="CRE_20205" /product="CRE-KBP-2 protein" /db_xref="WormBase:WBGene00061669" CDS join(167852..167947,168001..168216,168260..168457) /gene="Cre-kbp-2" /locus_tag="CRE_20205" /note="contains similarity to Pfam domain PF03980 Nnf1; contains similarity to Interpro domain IPR007128 (Nnf1)" /codon_start=1 /product="CRE-KBP-2 protein" /protein_id="EFO98486.1" /db_xref="InterPro:IPR007128" /db_xref="PFAM:PF03980" /db_xref="WormBase:CRE20205" /db_xref="WormBase:WBGene00061669" /translation="MSERRNQLSQMLDTTLQNFTKVLTESKNFAKLARHSKMSVDQVE MNSVMKRMIQATQIKVQEKTSKLIEENGICERFDELEVLTKESEELNQKLGTEAGYNY MKPKRDVALYLSDSTDKILHDADREIERLVKELEKEENDLAHRKQVLKELSTIIESQQ ENIISSVKN" gene complement(<168601..>169299) /locus_tag="CRE_20302" /db_xref="WormBase:WBGene00061670" mRNA complement(join(<168601..168852,168898..169143, 169171..>169299)) /locus_tag="CRE_20302" /product="hypothetical protein" /db_xref="WormBase:CRE20302" /db_xref="WormBase:WBGene00061670" CDS complement(join(168601..168852,168898..169143, 169171..169299)) /locus_tag="CRE_20302" /note="contains similarity to Paramecium tetraurelia Chromosome undetermined scaffold_96, whole genome shotgun sequence.; TR:A0EH68" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98630.1" /db_xref="WormBase:CRE20302" /db_xref="WormBase:WBGene00061670" /translation="MISVLCLVHIFFGAILAITAVIQCKSNSKKAITSVESPVRLIFP VPTTKSSQSPVVPVAPAAGSSIKQSDNASPEIVKKEEGKSEVKEPEPKKTESVVEKKE KEKMEDTFEAIQPKQQDAGRKKELGDKKKAENKGDYKTWNKVIENSEFNKTLSEKDEK DGKKKTGKKDDEKKEDDDKKEGDEKKSEKKEIEKKTEKDGDEKKSEKK" gene complement(<169649..>171434) /gene="Cre-tag-340" /locus_tag="CRE_20303" /db_xref="WormBase:WBGene00061671" mRNA complement(join(<169649..169758,169804..170582, 170662..170897,170995..171132,171181..171313, 171367..>171434)) /gene="Cre-tag-340" /locus_tag="CRE_20303" /product="CRE-TAG-340 protein" /db_xref="WormBase:WBGene00061671" CDS complement(join(169649..169758,169804..170582, 170662..170897,170995..171132,171181..171313, 171367..171434)) /gene="Cre-tag-340" /locus_tag="CRE_20303" /note="contains similarity to Pfam domain PF01852 START domain; contains similarity to Interpro domain IPR002913 (Lipid-binding START)" /codon_start=1 /product="CRE-TAG-340 protein" /protein_id="EFO98509.1" /db_xref="InterPro:IPR002913" /db_xref="PFAM:PF01852" /db_xref="WormBase:CRE20303" /db_xref="WormBase:WBGene00061671" /translation="MSGRQPLISNEYPRTSLSKDRKRFIVVAFFDSSITILLWLLCTV TRDDDWDKIFFDEINIFNPKFMKISLFDVVLLAILRMLILGFVYGICLVKQWYTVAFT TLASSAYILMKVLFYFNHSSSAVPPILLIIASFTLCWSEFYLMPFQILPRERRCKSDT INKILFRVSDARRDIDGVENPDFSTDEETRSNYRHRRGRRQQNSGNQSEVPTAVPSRV SSGVFIASDYDEFRSAAEFSSDEEARTRLLVPPDTRRLFEITLRECLDQVEELIRDSR LGGWKTLRSNTPTVLQGPDNYFLVRAEFNKFPALVLFNIAWKDMLKWNTQVNYIHHIL QKYLKRSFLFNFYSFFQVIEGKMIAHLDNATDLYYSVSAPAMRGYISSRDFLDLRKIK LDSTTDIYTGYFVSVESNLCPTSGNPKIVRGHNFPSMIRTSKGEGGITCFEWLMKTDL KGGLPKRLVNSGMINYFSEHVKRMNEFAESHYHCPPS" gene <173623..>177745 /gene="Cre-nhl-2" /locus_tag="CRE_20206" /db_xref="WormBase:WBGene00061672" mRNA join(<173623..173744,173827..174172,174733..175290, 175323..175758,175818..176392,176444..177206, 177253..177425,177581..>177745) /gene="Cre-nhl-2" /locus_tag="CRE_20206" /product="CRE-NHL-2 protein" /db_xref="WormBase:WBGene00061672" CDS join(173623..173744,173827..174172,174733..175290, 175323..175758,175818..176392,176444..177206, 177253..177425,177581..177745) /gene="Cre-nhl-2" /locus_tag="CRE_20206" /note="contains similarity to Pfam domains PF00643 (B-box zinc finger) (2), PF01436 (NHL repeat) (4)contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR003649 (B-box, C-terminal), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR000315 (Zinc finger, B-box), IPR001258 (NHL repeat)" /codon_start=1 /product="CRE-NHL-2 protein" /protein_id="EFO98593.1" /db_xref="InterPro:IPR000315" /db_xref="InterPro:IPR001258" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR003649" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00643" /db_xref="PFAM:PF01436" /db_xref="WormBase:CRE20206" /db_xref="WormBase:WBGene00061672" /translation="MKKAADRPNSAVNGRHDSPATTTNNTQNSGTPSLNGQDHLRSTS SSPLFGTEPLPEDDHASCPYCQHDFRKPRVLDCLHSMCEDCIIAQLDGHLQAKSAAIE EKKRAASTMLDCELETPKIKERPTPPGVIRCPICAQESHVGNDVRYVHAMLLDYVRLA ELQEVEVEKMVAYHSKPCTACKSEQEAIAFCDQCSSDLCENCTTAHTVMNLFEGHIVT TFADLRAHGIHPELRQVMCTTHNQPMRYLCAACETAACKQCLEVDHLNHKIIDINDLV INAIKEDVTNTVDRVEKKYNNSVADMNSLPDKSQQLIEQYEIAKYRVEKHYDELRSAL EVRSRKNIENHQKVLNELEEARVRQEVNIDDMYRKSQVNEARVHDAINFTRRLLAKGN GLELVVSRKKVIQQFGNLSHAIPSNGHQVELEFLTPSKKQVDHFVHQLTGTVIGRVIQ PTVKDVTNAVDNTEKAERGGSQAGVRASSITSSAPQDANKNINLVEWGRPVYQQNPQL GAIGGERKKNTQNGTNGTRTSGENAFGGWPPSSNPPDSTTPPPTNGQQTLLTGGQSQS AANIVTQQQLTNLPNAAAIAAAAAAAGMRPDLVAMANHMELNALTNGSSGGTQASIPE SMFPMWPARPGIPAVPTPTTTGLSSNASAAYLQQKIAAAQLQALSQRLNPQMLSMTNL RNSQTIQELMAMNALTSLNMNPQLSTAAAAAIAASAAANSASSTTVADGSQSQNASSQ QRVSDLKVHSVFGTSQQGSTIRELHCPSGFCLSDTDDILIADTNNHRVVVCGPPHPWK IGRPGTDDGQLCFPRKVIALRGDVVRYVVLDKGGDGKTRAQIFEARGEFVKRLNMVSL VPRGGIEVSAAAATPTGQLLLVDTAGFVYSIDVDAPRVTFWFDASTQLGEASDVAMFD NLIYITDFKHHCVQVYTSEGKFIRKMGEPSQTPYPIGIDVSKAGEVLVADTHGNHLHV VVFSPEGQHIHSFTHNEFRLSRCVGLRIAKSGHIVTLCKHNHTLFVFKPLILPNGIPV PTPVPHSASLINKFQ" gene <179701..>181151 /locus_tag="CRE_20207" /db_xref="WormBase:WBGene00061673" mRNA join(<179701..179818,179909..180275,180654..180731, 180777..180962,181013..>181151) /locus_tag="CRE_20207" /product="hypothetical protein" /db_xref="WormBase:CRE20207" /db_xref="WormBase:WBGene00061673" CDS join(179701..179818,179909..180275,180654..180731, 180777..180962,181013..181151) /locus_tag="CRE_20207" /note="coded for by the following C. remanei cDNAs: DR777185, DR409579" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98493.1" /db_xref="WormBase:CRE20207" /db_xref="WormBase:WBGene00061673" /translation="MASNTPEDPQSSSPPLRQPRLISQLARIEVEERERPRKMRLMFG EHQVVFLRSDGLRSRMARKNKKNTEESSASEDPEAGSSNLSEIIDGVATGRIGTESYD SVNSLSTSSSSPTSVDPISTTNFETSAIGTEGGTSTESFEPRTKTGNRSYHPPRQFHG ISTMVTHKRRWTYQTACNINAAEQNNDNQITYVSNPFLPLPRGNRRNGMCTATRMNYA AQRIDNRKYRAQAQAHHHIMSSGNDDSVSCEKCKMKYYFESMKAQKLITYEDSTNDEF LPVVRFNCPVCKELTKASF" gene <181981..>184149 /locus_tag="CRE_20208" /db_xref="WormBase:WBGene00061674" mRNA join(<181981..182092,182155..182341,182879..183037, 183128..183766,183813..>184149) /locus_tag="CRE_20208" /product="hypothetical protein" /db_xref="WormBase:CRE20208" /db_xref="WormBase:WBGene00061674" CDS join(181981..182092,182155..182341,182879..183037, 183128..183766,183813..184149) /locus_tag="CRE_20208" /note="contains similarity to Pfam domain PF00307 Calponin homology (CH) domain; contains similarity to Interpro domains IPR016146 (Calponin-homology), IPR001715 (Calponin-like actin-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98605.1" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR016146" /db_xref="PFAM:PF00307" /db_xref="WormBase:CRE20208" /db_xref="WormBase:WBGene00061674" /translation="MNRFTGMSSKPITPVNEQNITFRKKISMVSTSLQGSDDQPVASS PRNCYYRQNVAPLRRHMYDEADGGAISTSEQTPIEQKATEIRRMNNKKEASGKKEETP APPTILIEGPSSEASSKSNQKKTKPSTSSLASVFRSRASSPMEAVRKVFGRSSSKQPK ELPAPPSSLISVSSAPTGTETNLTEELEKLRNQLAHAHNQIAEQTKKQNVVQMVSCSQ QTDLINSATVTTMTDVYEETKKEESPDKENVHPDIICLEDDENNSSRIQSLLKELSLL KVIRNEQLSSHNKKLACFQKENNELKEDFRRTRKDFILILKEAVIRKDEAERELDIIS KSICNEDDWDSLMSQQTHALRRNVLLMWVQKKLALYSDQLTVSNFSSDWADCRAFCAL LYDIFPEAMSDVYVSPIVGDCVTRCRRTFQRLEIPFDERALGISTTPSSGVDDDSTSG MTITGLIDWRYIMNTVLVLYKKDVHGK" gene <184328..>186785 /locus_tag="CRE_20209" /db_xref="WormBase:WBGene00061675" mRNA join(<184328..184431,184916..185108,185522..186268, 186312..186488,186534..186656,186699..>186785) /locus_tag="CRE_20209" /product="hypothetical protein" /db_xref="WormBase:CRE20209" /db_xref="WormBase:WBGene00061675" CDS join(184328..184431,184916..185108,185522..186268, 186312..186488,186534..186656,186699..186785) /locus_tag="CRE_20209" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00017 (SH2 domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98513.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE20209" /db_xref="WormBase:WBGene00061675" /translation="MYNTGFSTEVSPFAQRSDRHVTLKKSLISTFGIQTPTDVLSATI EKEIYYHGLMPREDVRLILDKNGDFLIRLSEPKAGEFRSYILSVMFNNKLDDFNSVKH FVINNAQKKYFINNNVSFNSIQQMLSHYQKSNTEIQDGCKLVIPIRRQFWELDHEMIH IQKKLGEGAFGEVSAGIMKFKRGGKAVSVAVKQAKLEKLGKDQIKDFMMEARTMRKLG HQNVVKFYGVAVLQEPLYLVMELVVFRNNTFSTTLIVKASNGALDSYLKKNEDLPVEK RTEMLLQIAWGLEYIHGKPMLHRDIAARNCLYGDGQVKISDFGLTRNGTFYQVKPNTK APIRWLAVETIKTMICSQKTDVWAYGILCWEVFNNGAEPYPGMTPADVAQQVSNGYRM PPYPLAPPDVQTLMINCVAENPNDRPTMPEVAITLQRVTGVPRPNFAMIAKKQAEELL LMNTATVKTNTQRRKGTKKTAVPKGM" gene complement(<187134..>188134) /locus_tag="CRE_20304" /db_xref="WormBase:WBGene00061676" mRNA complement(join(<187134..187296,187387..187547, 187592..187825,187973..>188134)) /locus_tag="CRE_20304" /product="hypothetical protein" /db_xref="WormBase:CRE20304" /db_xref="WormBase:WBGene00061676" CDS complement(join(187134..187296,187387..187547, 187592..187825,187973..188134)) /locus_tag="CRE_20304" /note="contains similarity to Pfam domain PF09430 Protein of unknown function (DUF2012); coded for by the following C. remanei cDNAs: DR782152, DT935266, DR409236, DR408120" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98464.1" /db_xref="PFAM:PF09430" /db_xref="WormBase:CRE20304" /db_xref="WormBase:WBGene00061676" /translation="MDTSTLLINLSHHIIDMWPLKSIFLLSSLALLSSATEEVSRTEQ TSTLFSVEGELALPASRNCAKWSAGARVHLNHGQYIGFVRQDCTFRVDFVPSGTYIVQ IENTDFVFEPIRVDITSKGKMRARKLTILQPNNVNTLPYPLRLSARGPARYFRKREEW RITDMLFSPMVLMLVVPLVVMLILPKMTANDPELKREMENMQMPKVDMPDVGEMMANF FGGPAPAKKKAVTAGSGQRRK" gene complement(<188439..>189293) /gene="Cre-arx-6" /locus_tag="CRE_20305" /db_xref="WormBase:WBGene00061677" mRNA complement(join(<188439..188516,188584..188684, 188764..188983,189183..>189293)) /gene="Cre-arx-6" /locus_tag="CRE_20305" /product="CRE-ARX-6 protein" /db_xref="WormBase:WBGene00061677" CDS complement(join(188439..188516,188584..188684, 188764..188983,189183..189293)) /gene="Cre-arx-6" /locus_tag="CRE_20305" /note="contains similarity to Pfam domain PF05856 ARP2/3 complex 20 kDa subunit (ARPC4); contains similarity to Interpro domain IPR008384 (ARP23 complex 20 kDa subunit); coded for by the following C. remanei cDNAs: DT936578, DR782166, DY529375, DT934644" /codon_start=1 /product="CRE-ARX-6 protein" /protein_id="EFO98570.1" /db_xref="InterPro:IPR008384" /db_xref="PFAM:PF05856" /db_xref="WormBase:CRE20305" /db_xref="WormBase:WBGene00061677" /translation="MSATLQPYLEAVRHTLQAALCLEQFSSQVVERHNKPEVEVQTSK ELLMTPVVVARNKQERVLIEPSVNSVRISIAIKQSDEIEKILCHKFTRFMCQRADNFF VLRRKPLPGYDISFLITASHTEAMFKHKLVDFLLHFMQEIDKEISEMKLSLNARARVS AEEFLKRFN" gene <189609..>190156 /locus_tag="CRE_20210" /db_xref="WormBase:WBGene00061678" mRNA join(<189609..189747,189793..189902,189983..>190156) /locus_tag="CRE_20210" /product="hypothetical protein" /db_xref="WormBase:CRE20210" /db_xref="WormBase:WBGene00061678" CDS join(189609..189747,189793..189902,189983..190156) /locus_tag="CRE_20210" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98538.1" /db_xref="WormBase:CRE20210" /db_xref="WormBase:WBGene00061678" /translation="MTSGIQYQIIPLADREHNNKVASLLETKYKTAIQKRVTLNERFG VLEKGYALQATDPNVTKKGADVFFVVHDKNLISKKEFIENYVAKNPNTRAQEVEVEED KENAPSKKSAQNTTSAAKKEITTEEYLLDITKSILKPI" gene <190394..>192883 /gene="Cre-tag-19" /locus_tag="CRE_20211" /db_xref="WormBase:WBGene00061679" mRNA join(<190394..190488,190672..190858,190905..191055, 191101..191351,191396..191880,191932..192009, 192056..192410,192458..192556,192604..192721, 192762..>192883) /gene="Cre-tag-19" /locus_tag="CRE_20211" /product="CRE-TAG-19 protein" /db_xref="WormBase:WBGene00061679" CDS join(190394..190488,190672..190858,190905..191055, 191101..191351,191396..191880,191932..192009, 192056..192410,192458..192556,192604..192721, 192762..192883) /gene="Cre-tag-19" /locus_tag="CRE_20211" /note="contains similarity to Pfam domain PF00282 Pyridoxal-dependent decarboxylase conserved domain; contains similarity to Interpro domains IPR002129 (Pyridoxal phosphate-dependent decarboxylase), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1)" /codon_start=1 /product="CRE-TAG-19 protein" /protein_id="EFO98465.1" /db_xref="InterPro:IPR002129" /db_xref="InterPro:IPR015421" /db_xref="PFAM:PF00282" /db_xref="WormBase:CRE20211" /db_xref="WormBase:WBGene00061679" /translation="MGAEVPTLIVCLSISLCFNIGFITFLFIKRRSRNSPQYRKVENP GVESFPKNSSSFGTNPQRSPEKEKDIKDPPLKPIVNAKRSSEQAIRSDQGAPIVKEQQ QRSDRQRLQEPIGREEFVKCMNSVVQFINEYFDESHKQPVIPEHDINSTRIHVKVPEK PEEFSEILKDLKEIVIPNVTKDKNKSCLITYCIQICHTHHPRYHAKFAGKSLADIVGS TVSAALGHDVNSSPIIDSIERIICKWLSSAMAIPQMKSWLNELREPIGAVFYTPRDVF ISIIRHSIEKAEKTDENSPKSDKEQKPKFSDYVVYCSDDSQIALEEACSTMKVRLRKV LTFNKDSSAMTSANLLKQMEKDKARGLIPLVIVANYGSANVAANDEIWDLVKISRKKK IWLHLDATYAGCEWLDSNCRNNIHVLISELHSVHIACSSLFPYSGRISVVWSCERLDI EGGESRCWKLIINSSNISAKTHYGEHPIRLWILIRLYGIRSIREAVKRKIILGNAFSE RLTHHPEFFEMSHQNDHGVAVFQYRNKNVKDQKRDVNRMTSMFHNYLILSSTLKFSLL SYHGKVMIKAVVNYGRCNLSIMEESVSTLLNSVEEFEEALKKKKKLSETPRGEFCEFI GGSPNETTDITQSEDDPKKKNK" gene complement(<194776..>195803) /locus_tag="CRE_20306" /db_xref="WormBase:WBGene00061680" mRNA complement(join(<194776..195216,195245..195736, 195780..>195803)) /locus_tag="CRE_20306" /product="hypothetical protein" /db_xref="WormBase:CRE20306" /db_xref="WormBase:WBGene00061680" CDS complement(join(194776..195216,195245..195736, 195780..195803)) /locus_tag="CRE_20306" /note="contains similarity to Pfam domain PF03057 Protein of unknown function; contains similarity to Interpro domain IPR004296 (Protein of unknown function DUF236)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98459.1" /db_xref="InterPro:IPR004296" /db_xref="PFAM:PF03057" /db_xref="WormBase:CRE20306" /db_xref="WormBase:WBGene00061680" /translation="MASQLWRIVDSDQLILYIWPLMTVLCLTTTWVMCKGSKKAPITS AEPPPPPPPAPEPLHKKDELVHENQKSKIGKVAEGAPKQKGEEKNEKDEKNGKEKEKE KEKEKKSEKKDSKKSKKEDEKEKKPSEEKKEESKEVKKEEPKKIDPKGKDAFKKPEDE NAVAPKKDPNYQELFSIDFQTLCGLNNDLFGPDKNPKKQFKAPTKVEKADVKDPQYET LNGLGEDLFKEEKKDDDGKKKEFKPPEKVAKADAKDPQYETLNEVDKGIFNNNNNEEE KKSKKTNVEKKEERKEENKEEKEEEKKEENKEEKVKSEEKKE" gene <196133..>197512 /locus_tag="CRE_20212" /db_xref="WormBase:WBGene00061681" mRNA join(<196133..196210,196261..196481,196529..196611, 196656..196784,196833..196960,197010..197315, 197357..>197512) /locus_tag="CRE_20212" /product="hypothetical protein" /db_xref="WormBase:CRE20212" /db_xref="WormBase:WBGene00061681" CDS join(196133..196210,196261..196481,196529..196611, 196656..196784,196833..196960,197010..197315, 197357..197512) /locus_tag="CRE_20212" /note="contains similarity to Pfam domain PF08241 Methyltransferase domain; contains similarity to Interpro domain IPR013216 (Methyltransferase type 11)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98575.1" /db_xref="InterPro:IPR013216" /db_xref="PFAM:PF08241" /db_xref="WormBase:CRE20212" /db_xref="WormBase:WBGene00061681" /translation="MSISSENVEQEYVHSIYSRLATYQQKDHKPSSPRIWPRVRQFVD QQSIGSVILDVGCGEAKYTSQKCHVIGFDTCSEVLSSSKKENIELCLADAVNIPIRDA SVDAILNVSVIHHLATTSRRRQVLQECSRCLRVGGKMLIYAWAFEQPNGKFAAQDILV PWNMHETAIGGRLPKVKFHLNTTKEQRIIAASIPVNISDKSIAQRWFSGVLSKVTSLT DQLPYFSKRCPSSSGYKSNQSTPTGSDSPLMAQKLPSAAPQFLPTTNSLISGIKRWSP MLGRRLASLLVPVEEQFSEELAQTIMRESITEAMATLREVTFYRFYHVFKEGELSDLV DSVDSLKVVSTSFEHGNWCVIAEKISTNLIRP" gene complement(<197728..>198378) /locus_tag="CRE_20307" /db_xref="WormBase:WBGene00061682" mRNA complement(join(<197728..197945,198288..>198378)) /locus_tag="CRE_20307" /product="hypothetical protein" /db_xref="WormBase:CRE20307" /db_xref="WormBase:WBGene00061682" CDS complement(join(197728..197945,198288..198378)) /locus_tag="CRE_20307" /note="contains similarity to Pfam domain PF08583 Uncharacterised protein family (UPF0287); contains similarity to Interpro domain IPR013892 (Protein of unknown function UPF0287); coded for by the following C. remanei cDNAs: DR406373" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98599.1" /db_xref="InterPro:IPR013892" /db_xref="PFAM:(UPF0287)" /db_xref="PFAM:PF08583" /db_xref="PFAM:UPF0287)" /db_xref="WormBase:CRE20307" /db_xref="WormBase:WBGene00061682" /translation="MLPDLSPHLHTKECNMLIEFLHRCHSEKPIGKMLGKCSYWDEAV WQCTKKERIWRRDNNPAYKRRIVELRNLPEKYWTPALHKLKEEGLIIGGNEQSQGCKI " gene complement(<198588..>201336) /gene="Cre-coq-8" /locus_tag="CRE_20308" /db_xref="WormBase:WBGene00061683" mRNA complement(join(<198588..198753,198797..198973, 199019..199212,199376..200002,200071..200492, 200583..201093,201148..>201336)) /gene="Cre-coq-8" /locus_tag="CRE_20308" /product="CRE-COQ-8 protein" /db_xref="WormBase:WBGene00061683" CDS complement(join(198588..198753,198797..198973, 199019..199212,199376..200002,200071..200492, 200583..201093,201148..201336)) /gene="Cre-coq-8" /locus_tag="CRE_20308" /note="contains similarity to Pfam domain PF03109 ABC1 family; contains similarity to Interpro domain IPR004147 (ABC-1); coded for by the following C. remanei cDNAs: DR781130" /codon_start=1 /product="CRE-COQ-8 protein" /protein_id="EFO98527.1" /db_xref="InterPro:IPR004147" /db_xref="PFAM:PF03109" /db_xref="WormBase:CRE20308" /db_xref="WormBase:WBGene00061683" /translation="MAGKKPPASTLKWCQQEIGPICEGIGMVVRSQLGYDGRRIEQQL RRSALQTVVMAGQEVDPLKEPNKTNDSILSTALPTTNEALQRARIVAAGIETFAKLMS QGTYPGSAGFTISQTGKREFVKQTSPNQSNMVANLMSTAEKLSKGAIFLAPFPLPTLT KLGAWAIANPKVELPVPSQIRTAVPAIGQVESLIQSMLGVATANQFSGTNVVKPRKLK LEGVTDQIAEAVSAEADPLATIDSIPIDKTLTKEEAEFLIKAAKSVQDDNAETAIYGE KKLKPEVYRPELPKNFEVNLEMGNVHTLTRSNESSVPATRIGRLATFGQLAFGLLGGA TAEVTRRTFGMGKTLQAEGIPKNPFLSEANADRIVATLCRVRGAALKLGQMLSIQDSS TVPPALLQIFERVRQSADFMPIKQVHRQMRNAFGDEWRDKFETFDDKPFACASIGQVH KATLKDGRAVAVKVQYPGVAEGIDSDIDNLVSVLSVGGIFPKGMFLDAFVAVARKELK QECDYEREARAMRKFRELIADWQDVYVPEVIDELSSSRVLTSELVYGKPVDACVEEPQ VVRDYIAGKFIELCLKEIFVWRFMQTDPNWSNFFLGKHPKTGEPRLVLLDFGASRAYG KKFVDIYMNIIKAAYDGDKKMIIEHSREIGFLTGYETTVMEDAHVESVMIMGETLASN HPYNFANQDVTKRIQKLIPVMLEHRLTSPPEEIYSLHRKLSGCYLLAAKLKATVSCGG LFHEIHDNYVYGEDGRDINID" gene complement(<201483..>202868) /locus_tag="CRE_20309" /db_xref="WormBase:WBGene00061684" mRNA complement(join(<201483..201686,201780..201882, 202176..202301,202518..202717,202764..>202868)) /locus_tag="CRE_20309" /product="hypothetical protein" /db_xref="WormBase:CRE20309" /db_xref="WormBase:WBGene00061684" CDS complement(join(201483..201686,201780..201882, 202176..202301,202518..202717,202764..202868)) /locus_tag="CRE_20309" /note="contains similarity to Pfam domain PF03981 Ubiquinol-cytochrome C chaperone; contains similarity to Interpro domain IPR007129 (Ubiquinol-cytochrome C chaperone); coded for by the following C. remanei cDNAs: DR779052" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98640.1" /db_xref="InterPro:IPR007129" /db_xref="PFAM:PF03981" /db_xref="WormBase:CRE20309" /db_xref="WormBase:WBGene00061684" /translation="MLITRNFVRRLATSSRLLETTKKRTVEDMTQEMLQMPVSRVPPT IQRFTSSLKMKFKSDGLDQSVKSILDRASAQLYYNCADNYDFQKLCETFGLGDYMSSW YKLTLMHTWMVLMRLHSEFDGKAYMRLQRGLLSTMWLDIDHRLSIVSKELNQVMTGQN DMKHMHGLHLQTFFEYDEGFLHDDRVLAGAVWRCLYMNRSVDPIHLLKVVTYMRSTVA WLETQDTNQILVEGISEWKQLRSAPIS" gene <203509..>204586 /locus_tag="CRE_20213" /db_xref="WormBase:WBGene00061685" mRNA join(<203509..203664,203725..203829,203876..203945, 204011..204317,204427..>204586) /locus_tag="CRE_20213" /product="hypothetical protein" /db_xref="WormBase:CRE20213" /db_xref="WormBase:WBGene00061685" CDS join(203509..203664,203725..203829,203876..203945, 204011..204317,204427..204586) /locus_tag="CRE_20213" /note="contains similarity to Interpro domain IPR012335 (Thioredoxin fold); coded for by the following C. remanei cDNAs: DR407963" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98618.1" /db_xref="InterPro:IPR012335" /db_xref="WormBase:CRE20213" /db_xref="WormBase:WBGene00061685" /translation="MLLPRLDEVRRALTAFHIFNFILALAFPVIRSSFLCNYVFATDA NQQCEIDSREREILMFLLIILAWKGRKATNWMHYVNNIFLFSKIAGIFLFIRADILAG TLYILACLIVTVLFPEPAYTGPEQVTYFQGEQLFEELTRNRNTVWVIQFFTTWSQECR HTTPVFAELSQKFTLPNMKFGKLDIGRWSKEGERFRVNAHAMSRQLPTICVFKDAKEI SRRPLVNESRRAVPFVFSEENCVLAFDLVNLFNEQKQKKEAKTRKHD" gene complement(<204776..>205921) /locus_tag="CRE_20310" /db_xref="WormBase:WBGene00061686" mRNA complement(join(<204776..204856,204956..205153, 205200..205271,205313..>205921)) /locus_tag="CRE_20310" /product="hypothetical protein" /db_xref="WormBase:CRE20310" /db_xref="WormBase:WBGene00061686" CDS complement(join(204776..204856,204956..205153, 205200..205271,205313..205921)) /locus_tag="CRE_20310" /note="contains similarity to Pfam domain PF00248 Aldo/keto reductase family; contains similarity to Interpro domain IPR001395 (Aldo/keto reductase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98597.1" /db_xref="InterPro:IPR001395" /db_xref="PFAM:PF00248" /db_xref="WormBase:CRE20310" /db_xref="WormBase:WBGene00061686" /translation="MFHREYVREKMPLIGMGTWQVLHYLIFIYFSFFKFQIRKEEILH KVIDEGLRKGYRFIDTAQVYGNEAAIGRILGYLLPQHNLKRCRKYQYFNKDSALILRE DIWITSKLAPANAGAAAARKSIEDSLKHLQVDYIDLLLIHWPGSSLKSENPKNKILRE ESWKIMGEMMKEGKLKSIGVSNFEISHLEELKKVSNVVPAVNQVEYHPHFHQDDLVKY CNDNNIHFQAYSSLGSPTYREKLSKEPVIIKLAEKYGVSVPVLLLGFAYCQGISILPR TTNSEHVVCNYEVTKLSISENDISLMLALKVEHKTCWDPRVVV" gene complement(<206205..>208446) /locus_tag="CRE_20311" /db_xref="WormBase:WBGene00061687" mRNA complement(join(<206205..206257,206452..206614, 206898..207481,207752..207818,207873..208043, 208420..>208446)) /locus_tag="CRE_20311" /product="hypothetical protein" /db_xref="WormBase:CRE20311" /db_xref="WormBase:WBGene00061687" CDS complement(join(206205..206257,206452..206614, 206898..207481,207752..207818,207873..208043, 208420..208446)) /locus_tag="CRE_20311" /note="coded for by the following C. remanei cDNAs: DY527844" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98499.1" /db_xref="WormBase:CRE20311" /db_xref="WormBase:WBGene00061687" /translation="MSNRRSSNQKGGDFQPLETDSGVPQDLNNVSTTSTEPANRCTRY APPSLFVTKPGGPFHLHVQKFIEGSRHMVKKLRISLQELAVAKREGHHTASTATTETS PGEILTAQFSGQSLEDFQSVDDEEARKEFELEVKKALSQSSSVRDDYERLLKERIQEM RRILYLYHTDFDTSNLKVEDAERHWSTEKLTKDEQKSRFTKWDATMAEVLAELTETEW LSLKRGGFTGVSGNEFDYCLIQSKLIELEMEKKLTGNRENRCVDNYSLIEILERKDND VGRFFPKNYTLPKGKLYCRLLLNIANLITFNDVNKSWCCAKMDQNELENAVFKGVPFN SDGLPFKFPPKTVSLQPLNL" gene complement(<208624..>211482) /locus_tag="CRE_20312" /db_xref="WormBase:WBGene00061688" mRNA complement(join(<208624..208710,208753..208902, 211136..211249,211294..211432,211478..>211482)) /locus_tag="CRE_20312" /product="hypothetical protein" /db_xref="WormBase:CRE20312" /db_xref="WormBase:WBGene00061688" CDS complement(join(208624..208710,208753..208902, 211136..211249,211294..211432,211478..211482)) /locus_tag="CRE_20312" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98622.1" /db_xref="WormBase:CRE20312" /db_xref="WormBase:WBGene00061688" /translation="MHYEDVRFLSSVSVISTFAFFFHLSEALSVHGTLFRPLAIFMTL SLYIWFTVFGQWISRARRATFNEQNLLLTYQPRAFTHGHLFVPDPPTPCRFSQTPVES CTDSDFRNARDAHYKDEFHRAMNMSTEKKMIPQEKVETMRIEFDQSSSPPSSPSNSGK SPNF" gap 210125..210134 /estimated_length=10 gene complement(<212146..>212864) /locus_tag="CRE_20313" /db_xref="WormBase:WBGene00082247" mRNA complement(join(<212146..212370,212439..>212864)) /locus_tag="CRE_20313" /product="hypothetical protein" /db_xref="WormBase:CRE20313" /db_xref="WormBase:WBGene00082247" CDS complement(join(212146..212370,212439..212864)) /locus_tag="CRE_20313" /note="contains similarity to Pfam domain PF00931 NB-ARC domain; contains similarity to Interpro domain IPR002182 (NB-ARC)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98664.1" /db_xref="InterPro:IPR002182" /db_xref="PFAM:PF00931" /db_xref="WormBase:CRE20313" /db_xref="WormBase:WBGene00082247" /translation="MAQLNGKLEKRGLSGIECITPYCYKSLSIALQRCVEVLSDEDRS ALAFAVIMPPGVDIPVKIWSCVIPVDICSSEEEQLDDEVADRLKRLSKYVLLMLELSN VLCYRRGALLSGKRSPVLTYKIDNVIHMFLKHVVDKQTISNGIRTLEQRLLEFGNNNV PTPERHPVSHLQKFRRSSVGDMYPKTEESIIRPEDYPKFLQIHRQFYDSLKKFTTL" gene <213100..>214282 /locus_tag="CRE_20214" /db_xref="WormBase:WBGene00061690" mRNA join(<213100..213134,213184..>214282) /locus_tag="CRE_20214" /product="hypothetical protein" /db_xref="WormBase:CRE20214" /db_xref="WormBase:WBGene00061690" CDS join(213100..213134,213184..214282) /locus_tag="CRE_20214" /note="contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF); coded for by the following C. remanei cDNAs: DR776501" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98612.1" /db_xref="InterPro:IPR001478" /db_xref="WormBase:CRE20214" /db_xref="WormBase:WBGene00061690" /translation="MEHQNGPCRRSRSRSRSRGAFNRRSNYSNTPCIVPINSVALAPI EENSGHSTSIMPFVNPLMVAAKELKFACQLAHGSPVAIIERWSDVSELYQSIADCFNI AKDDIIFLTVNDFKVSSHKKLIDTVLFLQPDMKNMFTGTLNFKDMLYAHIRGQATELR VLKDSNNFGVTITDNGLGNAFIKMINPGSVFDRMRPATQVGQLIEEINGERVLGRRHY QVARILKNIHRGDECVIRLIAPKTADPGIMKTPKKSSGELAKGTIRFKSEGGFAVEDI QDQMIQAEMCGKLNELFDQYLGVQDDQLAMRIWETAATCESLWQLGEAIKKSELSMFE FPDGLVFDMWGIIGDLKREQRNKKPSSIKNSNIARPSAMVLFN" gene complement(<214313..>215810) /gene="Cre-ced-4" /locus_tag="CRE_20314" /db_xref="WormBase:WBGene00061689" mRNA complement(join(<214313..214654,214713..214851, 214984..215073,215120..215213,215282..>215810)) /gene="Cre-ced-4" /locus_tag="CRE_20314" /product="CRE-CED-4 protein" /db_xref="WormBase:WBGene00061689" CDS complement(join(214313..214654,214713..214851, 214984..215073,215120..215213,215282..215810)) /gene="Cre-ced-4" /locus_tag="CRE_20314" /note="contains similarity to Pfam domains PF00931 (NB-ARC domain), PF00619 (Caspase recruitment domain); contains similarity to Interpro domains IPR002182 (NB-ARC), IPR001315 (Caspase Recruitment)" /codon_start=1 /product="CRE-CED-4 protein" /protein_id="EFO98517.1" /db_xref="InterPro:IPR001315" /db_xref="InterPro:IPR002182" /db_xref="PFAM:PF00619" /db_xref="PFAM:PF00931" /db_xref="WormBase:CRE20314" /db_xref="WormBase:WBGene00061689" /translation="MQWFISMQLPFRKYYYDIFSVFSLFQMLCEIECRALNAAHTMLI QDFEPKDALTYLEGQKIFTEDHSDLIGTMPTRLERIANFLRAYRRQASELGPLIDFFT YNNQSHLAHFLEEYIYFAINEPHQLRPVVIAPKFSRQMLDRKLLLGNVPKQMSCYSRE DHVERVIDKLDELCDLDSFFLFLHGRSGSGKSVIASQALSKSDQLIGINYDSVVWLKD SGTTPKSTFDLFTDLLLMLKRARVVSDTDDSHSITDFINRVLSRSEDDLLNFPSVEHV TSVVLKRMIVNALIDRPNTLFVLDDVVQEDTIRWAQELRLRCLITTRDVEISNAASPT CEFIEVTSLENFECYDMLEAYGMPMPADEREEDILHKTIDLTSGSPAALMMIFKSCEP KTFEK" gene complement(<215937..>217244) /locus_tag="CRE_20315" /db_xref="WormBase:WBGene00061691" mRNA complement(join(<215937..216032,216076..216584, 216835..216936,217014..217082,217140..217191, 217242..>217244)) /locus_tag="CRE_20315" /product="hypothetical protein" /db_xref="WormBase:CRE20315" /db_xref="WormBase:WBGene00061691" CDS complement(join(215937..216032,216076..216584, 216835..216936,217014..217082,217140..217191, 217242..217244)) /locus_tag="CRE_20315" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98654.1" /db_xref="WormBase:CRE20315" /db_xref="WormBase:WBGene00061691" /translation="MNEETPGTSNSEDVQFDFKFIHDARHQSIEYLREELARLKRDNH PLLHSVRRKILNDRTIQADRTQRHRERAAQRAKQDRDSKETEYRFENTHRISELMEEA TKRAEDMEKSMTHEYGLVDITKAIVAPLTFDSTKKTLRGRGGGLLIEPASYFNSNQNS RIPEFKLNLAFDNVRIRADLDAILNRPEARRKVYSIVAIQKPKLIIDNKSFKHGEDVY AWNTTFGNVLARLEITNDKLVHLKGSNNWDSRQITATLEDLEEGRVVINKQKGKDRTH " gap 218321..218460 /estimated_length=140 gene <219054..>221579 /locus_tag="CRE_20215" /db_xref="WormBase:WBGene00061692" mRNA join(<219054..219190,219237..219325,219369..219534, 219579..219683,219877..220055,220121..220307, 220350..221030,221073..221377,221425..>221579) /locus_tag="CRE_20215" /product="hypothetical protein" /db_xref="WormBase:CRE20215" /db_xref="WormBase:WBGene00061692" CDS join(219054..219190,219237..219325,219369..219534, 219579..219683,219877..220055,220121..220307, 220350..221030,221073..221377,221425..221579) /locus_tag="CRE_20215" /note="contains similarity to Pfam domain PF01713 Smr domain; contains similarity to Interpro domains IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR002625 (Smr protein/MutS2 C-terminal), IPR008431 (Cyclic nucleotide phosphodiesterase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98660.1" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR002625" /db_xref="InterPro:IPR008431" /db_xref="PFAM:PF01713" /db_xref="WormBase:CRE20215" /db_xref="WormBase:WBGene00061692" /translation="MSPQKHSQCHQLDADAREIIQCINDGHRVFVLLRGVTGSGKTTL AQRLVEAANTSYQTSTIISEDTVGSKQLTKTVRQSFEDDVYLVVVDAENVERNVVKKL ADLAVKSYFECFVTEPDTEWRHDASECKIRSSRGEGVESIERKIEQIKNSPIDWECII PGANVTIGNSLSEDTPPTPPTSSMGSSNCLLNVSTTSTRQLFSMVPEKKKKRSVKTVS TYVTNECIVLELAGLIETSGLYGYSLKLEEEVEEKQNKDVKIVNKKTETEEVIFASGG RTIFRPEMTLLTGTEEEIQFSSLRSIFPETDLFVLRHFLQIFGYSEAVAFFKATTEDT VLPILPTDDRILLEELDAMESFTISNMTIEEEIEARRSEREALRFVEDIGKAPFLYSS KNYSVLISDTENDEQIARILHNEFNGEDYQLQNTDDYDIARLIQNFSTTDIDYIRQLY EIWANNYENTYQCLIENGAERTEPLMKGKQTFSQTLSSASPIRRDPPKKSQKEEKNHF LKAASQKTHHLLQDVQLEALKSRQQIEKNRFSQNSYCPTTSSRYSKTVMMSRVERLKE GVSAQVKDIDRKIKEAHNNPWNLDLHYMSVDGAVELVLEAIEAVRYHVKYSNKMGRRI TVVTGSGNNSRCGARIKPKVILMLDSQNISYEMLNDGCIQVKV" gene <222030..>223185 /gene="Cre-clec-157" /locus_tag="CRE_20216" /db_xref="WormBase:WBGene00082230" mRNA join(<222030..222078,222429..222862,222907..222989, 223032..>223185) /gene="Cre-clec-157" /locus_tag="CRE_20216" /product="CRE-CLEC-157 protein" /db_xref="WormBase:WBGene00082230" CDS join(222030..222078,222429..222862,222907..222989, 223032..223185) /gene="Cre-clec-157" /locus_tag="CRE_20216" /note="contains similarity to Interpro domains IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)" /codon_start=1 /product="CRE-CLEC-157 protein" /protein_id="EFO98536.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="WormBase:CRE20216" /db_xref="WormBase:WBGene00082230" /translation="MYSPRLLLLVVSSTFIVDAIELSRGKSFSFSSSSSSSSLDSSEY HRRHSYSGKGGRPSRPGSRPNRPSRSSTTTRAPNPSCPAGWTLFNRQMGAWCVQLFPG AYGQEQAENACRSYGAVLSSVENADERSRITNMGLTMMLPTGWKFGTIRTGLRRDSIG SSWYTTDQFTTGMQGLVWSPLEPNQGYWQGRPNNCGLIWLWVPGGKQEGARVLGTFFA MECLTSPPDRWRGFICGKRAT" gene <224337..>225148 /gene="Cre-clec-156" /locus_tag="CRE_20217" /db_xref="WormBase:WBGene00061693" mRNA join(<224337..224741,224851..224933,224995..>225148) /gene="Cre-clec-156" /locus_tag="CRE_20217" /product="CRE-CLEC-156 protein" /db_xref="WormBase:WBGene00061693" CDS join(224337..224741,224851..224933,224995..225148) /gene="Cre-clec-156" /locus_tag="CRE_20217" /note="contains similarity to Interpro domains IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)" /codon_start=1 /product="CRE-CLEC-156 protein" /protein_id="EFO98469.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="WormBase:CRE20217" /db_xref="WormBase:WBGene00061693" /translation="MRNLVIFLLFGTLFAIGESIIIRDDSSDSHESSYYSGGGHRPKP PRPTKPSSKCESGWTRVQRLSGGWCVKVFAGLTNQPQAESICAQNGARLSAVESSQER ETIAELGRVLMTTSSTWKFGSLRTGIKRNTLNSPFYVTDGNAKDLNAVKWSHAEPNQG SYNGGGNNCGMMWLWVPGGRQVQQRVHGEFFSMVCHITWNDRFRGFVCGKSAV" gene complement(<225230..>225981) /gene="Cre-acbp-7" /locus_tag="CRE_20316" /db_xref="WormBase:WBGene00061694" mRNA complement(join(<225230..225384,225428..225523, 225822..>225981)) /gene="Cre-acbp-7" /locus_tag="CRE_20316" /product="CRE-ACBP-7 protein" /db_xref="WormBase:WBGene00061694" CDS complement(join(225230..225384,225428..225523, 225822..225981)) /gene="Cre-acbp-7" /locus_tag="CRE_20316" /note="contains similarity to Interpro domains IPR014352 (FERM/acyl-CoA-binding protein, 3-helical bundle), IPR000582 (Acyl-CoA-binding protein, ACBP)" /codon_start=1 /product="CRE-ACBP-7 protein" /protein_id="EFO98498.1" /db_xref="InterPro:IPR000582" /db_xref="InterPro:IPR014352" /db_xref="WormBase:CRE20316" /db_xref="WormBase:WBGene00061694" /translation="METSLEDFKQIRARFVQRKVLKYEFELFTKFEGHTRNIWGFHQQ AIIGDINVPKLNYMEIEEGERSWMWRWIHGNEKWHAWNKCRGLTKEEASKKFIEEVQK LKSEIHQLLIEWKIEISNDPKGSELNNNDALFMD" gene complement(<226418..>226673) /locus_tag="CRE_20317" /db_xref="WormBase:WBGene00082237" mRNA complement(join(<226418..226536,226583..>226673)) /locus_tag="CRE_20317" /product="hypothetical protein" /db_xref="WormBase:CRE20317" /db_xref="WormBase:WBGene00082237" CDS complement(join(226418..226536,226583..226673)) /locus_tag="CRE_20317" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98596.1" /db_xref="WormBase:CRE20317" /db_xref="WormBase:WBGene00082237" /translation="MKFMWRTLLLSTILLISITSACNKNGEGCLLMRNVLRDPLRLST WKVSSLNRAINQLQAYQQLFHGSFI" gene <231080..>232126 /locus_tag="CRE_20218" /db_xref="WormBase:WBGene00082238" mRNA join(<231080..231924,231982..>232126) /locus_tag="CRE_20218" /product="hypothetical protein" /db_xref="WormBase:CRE20218" /db_xref="WormBase:WBGene00082238" CDS join(231080..231924,231982..232126) /locus_tag="CRE_20218" /note="contains similarity to Interpro domain IPR012677 (Nucleotide-binding, alpha-beta plait)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98602.1" /db_xref="InterPro:IPR012677" /db_xref="WormBase:CRE20218" /db_xref="WormBase:WBGene00082238" /translation="MHYAGSRNQLVSKIGEFIMLASESVQDESQVTPEEKTIRLMMRY RHLYAPWDISPQDAIKEEKSLDKGKRVLNQLDTKMTEFDRWRSQNVDLPEEIKEMVDH VESEIKREREKLERANKQFVLPPGTQEDYEQETKEHVAIGIARMQEVRMRSTIAIQDI INYWEEIRRGYEATQKRKLLELERRQKEESTRLRREGERKVNHFVRPSFGKGNNSIHV RPVNIHNWRSVESYLRSFGEVTASKLHGSYAFVDYSSTETAKFVRNLRQFICNGETIY VNYAINNWKEYCERARRGWQINPPIGNEGLSVSNPASAPTSWHDHQRMLTRPQ" gene <232655..>234016 /locus_tag="CRE_20219" /db_xref="WormBase:WBGene00082246" mRNA join(<232655..232734,232815..232946,233003..233754, 233832..>234016) /locus_tag="CRE_20219" /product="hypothetical protein" /db_xref="WormBase:CRE20219" /db_xref="WormBase:WBGene00082246" CDS join(232655..232734,232815..232946,233003..233754, 233832..234016) /locus_tag="CRE_20219" /note="contains similarity to Saccharomyces cerevisiae RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex; mutant is deficient in Zip1p loading onto chromosomes during meiosis; SGD:YKL054C" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98662.1" /db_xref="WormBase:CRE20219" /db_xref="WormBase:WBGene00082246" /translation="MTDPNTETINEDGQKLSEYGVLKDDKLPAMPVEGNTHEDPSADG KVIVSVKETEEAAKLRESQEEKILSIQKAYFLVAGKIDTLEKESEAHRDVLDQITTDQ SNLSEKIDQQMSTKADLQCFQLGIEDEVSRLKEAVKELKHRLLGEPKESPLDCFSPSP FKIPKMSEKRGPTGEIEENSSSITRKSLKDCPLCRDSGHRLADCPQFASKLEKLQQFR KRQICCTCGNLQCSRINCPKATIQCQICKGKQEFGKTLHISEICIFETHVSKRPSQTE YRRQKFSAQRPRSKSPAKENQAATQGPQPAQLQQQMVQQQYQQQPMMPTGPAFGPSYQ MNPMIPPQQYQYQHPQQMVPMPLQPIPIQQYGYYQQQPGPSNQTTHHQ" gene <234851..>242774 /locus_tag="CRE_20220" /db_xref="WormBase:WBGene00061695" mRNA join(<234851..237859,238005..>242774) /locus_tag="CRE_20220" /product="hypothetical protein" /db_xref="WormBase:CRE20220" /db_xref="WormBase:WBGene00061695" CDS join(234851..237859,238005..242774) /locus_tag="CRE_20220" /note="contains similarity to Pfam domains PF05380 (Pao retrotransposon peptidase), PF00665 (Integrase core domain); contains similarity to Interpro domains IPR001584 (Integrase, catalytic core), IPR008042 (Retrotransposon, Pao)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98537.1" /db_xref="InterPro:IPR001584" /db_xref="InterPro:IPR008042" /db_xref="PFAM:PF00665" /db_xref="PFAM:PF05380" /db_xref="WormBase:CRE20220" /db_xref="WormBase:WBGene00061695" /translation="MAPTPRIQTLAQRAGRLKTCITRVIDGSKQVLEYVDQWEADRKA ACQAAEHESRGHPIPDLAVTTDALNTLISMETQLEGLPQILQDKAAKLVEEAEENNEE WEELENLCKLAVEEREDQRKHLLIAVRAKIEMFRELHDASEETVPPPPLSPQQVLHIM AESIDAPNQEPIVTSPMKYPLYHELHMVNSTGMNGNNSELSTEASQLPDRIHDLNLNG TLENQTRAADTPILNSNALISPELGGLPAGNIVYQPNNMRQKGRQNINENSNYLAAAG VNQSNMNSQSGPVRRDISNNLHNNIGQPRFEYSEENQQNNCHERNFNGNEHSEYYQQQ QRYNRMRYSEYPDHLINQSQYHYQQNQNRQVQGNWNNQQIPGKRCEVCEGDHEITLCN QNNEVVARVCIKIGICPKCRTGGHPVTGCPLLYLEKEQARMNTEKNHEESRNRNQFND QESNQDNRNSTHQHRANNQPRYAERKNEILERELARHVATIKPFTGVVSEYASFRNIM TDYLDSETVSLAVRRDTLMQKISGEAAVHKSILNDPGKAIEATMKNLDRTYNRKGSTS VRNQFEKVVVSDESIDTFIKSLALSRSLHDKVLEEEPHGFEYHSTKALLGRMPDAVRA MCNKMLRNETLTTEKIYEKAEEHLENQIEDAEITGRSASQSLKKWKTELHVTQSETDH KEEADKDSEDESTAELLAFGAKREQSKFHGSKTLNNQQGRSNQTVNNEVTAPKSNQKQ STQQPAQSQNQPNIGTQAPYLSNMLPQSQFPQTHQTNNQLGSYQHQFAQYPYQMNSNH SQFQGHVPTPMSSSPWNPQPSHINYYLHPTGQHQNFTNQQHNGQTGNLNQSQDPRNQL GYHPVPQHNNSPASFGQSQQRSSSKPWFKENGSPPSVGHSTGIQLSIQEEAMKPLTDC RDPDRYNLGPGPNIALIRYTFPRDYDEESYCQVCGKGHKLVRCLLSSSNVRKWIDEKN ACSNCASRTHSVTACTSQVSCFYCCGKHHTGPKRASESLKLIKETPKMVDQSSADENK SEYPLQTVQNTSINLLVSPSEINSKDNILIKNQANTKTSVTDSKPHIIPLASSSVNNT TDTIKALHKNTTPDKSDAQQKNILLVSPSENILFDTTRLYDDAPIVNKEARIHQITHT LQTESFEPTELNVNEEDISLPLTTLQLDNNDQILTLVDTGASITLIADQAAKDLGLKV AQEIKLTVNGYKGKSRSSSNIYEIIIKGGTLEYKTFVAGVPDLPEIRYKTPVFSEEDH KELELYGLTNRDVIPCEEFERKRIGMILGNDILPHFIRGSQRICLPSGRYIELSPFAK MTFPRARHCPVMDTPTKDNKAEVQKERKEHSINTLMAQKYGRAGEDDLTDLILQLWKS ENCGVESATLREEEYLDQRRLLIWFEDTLEITEDGQIAVALPWNGKEIRMGTNKNLAY KRLMCLIEKLRNNSNLLREYNKIIKEQLKAGIIERVTPEMQKQGRSYYAPQNAVFKAN SANTKVRIVGDSSSHQKGQLSLNDCLFEGPNMLRTAPGLHLRHRIDQYPIVGDIARAF HQVRLQEKDRNVTKWLWVEDIEKPPTGDNLVEYRFTRIPFGMKCSPFLLAATIRHYLL MAASILSIEIDKNLYVDNIMVSTNYAEEVLPKIKGIQEEFKVMSMPVREFGTNYHPAL LEIPEADRAESHISKFLGYSWNTTDDTITVLIPEPSVNRPTKRDIASFFAKTFDPMGY SAPLHVKIKKFVQKIWQNGLEWKAPLTDKLNKEWEIIKQQYKDTALVIPRKLRQKYHP DEKPEIVVFCDASQHTYACAVYIVYRHPDGSVESNLIGAKSKVRPSSGAGWTIPRLEL LAMEIGMRYTESLIHELPEKDKPVSLDIFSDSMIALYWILTEEQKKQWVNNRVTTVHE VDKAIKESGMEVSYHHVTTDKNPADLATRGIDSTSLQNCTFWLNGPSFLSEPRKNWET KLEGEIQCPIEDKDEVTLELRNTSKPKNTSIRQKKRAEAMANLVLVETSVNATVSTSK KPKQTTEIYTSFVPFEYTNSLSSLTRITNMVLKFISTVSKNKTLQSEPLKEYTECNKI TDTVERETRQRKLARLTVFTEHYKEAESRDWKFKETLNPFQSKDGLWRTKKHYQSPNI PLETSEPILVHREHKLAVMLMDEIHTENVHLPANYLVTALRSKYWIQTDGRLARSTIS RCVACRKVKSFPFLYPYNTSLKENRTVPSTPFAKVGLDFFGPLQYKNRNETELEKGYV LIYTCLTTRCTHLEICADSSTTSYLNALKAIFAQRGVPKYIYSDNAQTFQLGERVLRE DIKSYEPESRLINFLAREDINFRHITPMAPWQGGVYERIVGIAKKQFRKEIGKQIFSF PELHSIMKRVEGAINSRPLIRNPVHINDVPVLRPIDFLLPAVLLEVPNDTDNLKGDIL YDPTVSTTEKETREHLKKMDRVMEKLWKIWSTSYLLLLRENAKRNNRFSKVSPRVGQV VLIQEEMLPRHTWPVGRITKLIGTPPLVQSVEVLYKGSIKERAVNQLIPLEIDEEQET IQTPEHATTSRIPHKVNQNESRTDNSDHKITSTRLQPPRRAKEGVHYSLDSDSE" gene <245068..>245283 /locus_tag="CRE_20221" /db_xref="WormBase:WBGene00061696" mRNA <245068..>245283 /locus_tag="CRE_20221" /product="hypothetical protein" /db_xref="WormBase:CRE20221" /db_xref="WormBase:WBGene00061696" CDS 245068..245283 /locus_tag="CRE_20221" /note="contains similarity to Pfam domain PF05611 Caenorhabditis elegans protein of unknown function (DUF780); contains similarity to Interpro domain IPR008498 (Protein of unknown function DUF780, Caenorhabditis species); coded for by the following C. remanei cDNAs: DT934232, DT937294, DY529726" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98615.1" /db_xref="InterPro:IPR008498" /db_xref="PFAM:PF05611" /db_xref="WormBase:CRE20221" /db_xref="WormBase:WBGene00061696" /translation="MADKSAYMSAGGYSSGYMGSNASSSGYAREDYASGGSGGSNNNN QGGSGGNTNPGAQVFKARTDQSCYLGP" gene complement(<246262..>246730) /locus_tag="CRE_20318" /db_xref="WormBase:WBGene00061697" mRNA complement(join(<246262..246412,246451..246635, 246686..>246730)) /locus_tag="CRE_20318" /product="hypothetical protein" /db_xref="WormBase:CRE20318" /db_xref="WormBase:WBGene00061697" CDS complement(join(246262..246412,246451..246635, 246686..246730)) /locus_tag="CRE_20318" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98460.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CRE20318" /db_xref="WormBase:WBGene00061697" /translation="MTEKKQFIATEPSDKIRFTAESQDEQKTVLKITNQSEMKQAFKV KCTRNDLFRIKPSTGILDYNQTITVILIYRRVIGGQGKPPVEKQQFGVYHIPAPENCT CEGAWAEHYGPPQGEHKLKVVFNE" gene <247095..>250250 /locus_tag="CRE_20222" /db_xref="WormBase:WBGene00061698" mRNA join(<247095..247170,247216..247445,249487..249757, 249813..249901,249945..250064,250107..>250250) /locus_tag="CRE_20222" /product="hypothetical protein" /db_xref="WormBase:CRE20222" /db_xref="WormBase:WBGene00061698" CDS join(247095..247170,247216..247445,249487..249757, 249813..249901,249945..250064,250107..250250) /locus_tag="CRE_20222" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98483.1" /db_xref="WormBase:CRE20222" /db_xref="WormBase:WBGene00061698" /translation="MRNSIFLLLFFCSFILHLNGQVSVNSPFEFPEELEEEEEEKSLE KDILVIPNRFPKRLNWFCNPRNEMMRDRLCMGEIDAFALACADDSPPIQLVPFCLGYK HQCSKANYPSEDWCEKEYNHYKRFCTHCEKNPCISFTHDIDCYCEPYDNIWRRYGYET ARWCQKYELTCDEKTRRDKGNELIQLMQDRIKVHYRCLHLYNLPQVICDPFSTRFDWY RCMKFLFDCELISDWDDDDYDDAGVITGGDTSSQKKPSLPSISKPKTSLVEPSISDQA ETLLKGGLSSQQLKENAAIREKEKQLESVLKKP" gene <254374..>255760 /locus_tag="CRE_20223" /db_xref="WormBase:WBGene00061699" mRNA join(<254374..254482,254527..254654,254702..255551, 255630..>255760) /locus_tag="CRE_20223" /product="hypothetical protein" /db_xref="WormBase:CRE20223" /db_xref="WormBase:WBGene00061699" CDS join(254374..254482,254527..254654,254702..255551, 255630..255760) /locus_tag="CRE_20223" /note="contains similarity to Interpro domain IPR000010 (Proteinase inhibitor I25, cystatin); coded for by the following C. remanei cDNAs: DT934291" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98629.1" /db_xref="InterPro:IPR000010" /db_xref="WormBase:CRE20223" /db_xref="WormBase:WBGene00061699" /translation="MSSIRPMELEKTPYTHEEPLTCGGKVKRWCNKYLLEGQHLDDEQ ANKVANLPENPTFGDLVFIKYRKFVAMLIPFLLIHCVWWSTAIRHNLFQYYHDYWHMP VTMALGSFVGGMTSEGSGAVAFPVMTLALHIKPEIARDFSLMIQSIGMTSALVCVLFM KVKFEHRAVIIGCLGAVPGFIVGVHYIDPLFSGPQKKMLFVSIWTAFAFALGILNAQK KRSTFREIPEFCAWKGWVLFFTGIIGGIFDAFAGSGIDICIFSVITLLFRVTEKTATP TTVVLKGTIAVFGFYYRAVMMGDIDIMAWRYFAVSIPVSAATGPIGSFLGSHLHRQVV AGFVYVLEAIALVGFLFTRPAWQLIAVGGCIILGGFVFFSALSKAGSILMNRIEARQQ KEAQKAGITSGSY" gene <257842..>259250 /locus_tag="CRE_20224" /db_xref="WormBase:WBGene00082232" mRNA join(<257842..258382,258430..>259250) /locus_tag="CRE_20224" /product="hypothetical protein" /db_xref="WormBase:CRE20224" /db_xref="WormBase:WBGene00082232" CDS join(257842..258382,258430..259250) /locus_tag="CRE_20224" /note="contains similarity to Brugia malayi Amine oxidase-like protein, putative.; TR:A8Q338" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98556.1" /db_xref="WormBase:CRE20224" /db_xref="WormBase:WBGene00082232" /translation="MVQLYSENIKSDHEVMDQNKEISKKEKIKIWCKKYLLEGESESY QFEQSRLFSGQTLDDKQAGKVEKFPDNPTINDLIFIKYRKWVAMLIPMTLIHVSPMYF SFCSSFEFQIIWWSVAIRYNLFQWYPTYWHMPVVMILGSVIGGMTSEGAGAVAFPVMT LALHIDPKIARDFALMMQSIGMTSALICVIIMKVKFEIRAVILGCLGAIPGFIIGVHW IDPLLSGPQKKMLFVSIWTAFALSLGILNSQKKRSTFREIPEFCAWKGWVLFFTGIIG GIFDAFAGSGIDICIFSVITLLFRVTEKTATPTTVVLKGTIAVFGFYYRAVMMGDIDI MAWRYFSVTVPISACGGPIGSFLGSHLHRQLVASFVYILEAIALVGFLLTEPGWQLIV IGGKLSKRIVLIISYFSAVIIIGCFVFFSIVSKVGSVLMEHSNEEKENQLRNMEEQKT GQQ" gene <259924..>260830 /gene="Cre-arl-6" /locus_tag="CRE_20225" /db_xref="WormBase:WBGene00061700" mRNA join(<259924..260013,260061..260190,260238..260383, 260624..>260830) /gene="Cre-arl-6" /locus_tag="CRE_20225" /product="CRE-ARL-6 protein" /db_xref="WormBase:WBGene00061700" CDS join(259924..260013,260061..260190,260238..260383, 260624..260830) /gene="Cre-arl-6" /locus_tag="CRE_20225" /note="contains similarity to Pfam domain PF00025 ADP-ribosylation factor family; contains similarity to Interpro domains IPR006687 (GTP-binding protein SAR1), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR006688 (ADP-ribosylation factor), IPR006689 (ARF/SAR superfamily)" /codon_start=1 /product="CRE-ARL-6 protein" /protein_id="EFO98656.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006687" /db_xref="InterPro:IPR006688" /db_xref="InterPro:IPR006689" /db_xref="PFAM:PF00025" /db_xref="WormBase:CRE20225" /db_xref="WormBase:WBGene00061700" /translation="MGFFSSLSSLFGMGKKNVSIVVVGLDNSGKTTILNHLKTPDTRS QQIVPTVGHVVTHFSTQNISFQAFDMAGQMKYRSAWESFFSSASGVIFVLDSSDRIRM ELLKDELWMVMDHKDVASRGIPVVILANKMDIPGAMTAADITTALGLNLHRSGTWSIH STCGLTGDGLDKAMQQLSTEVLKCLEARKS" gene <261629..>262806 /locus_tag="CRE_20226" /db_xref="WormBase:WBGene00082229" mRNA join(<261629..261688,261736..261924,262018..262517, 262561..262615,262663..>262806) /locus_tag="CRE_20226" /product="hypothetical protein" /db_xref="WormBase:CRE20226" /db_xref="WormBase:WBGene00082229" CDS join(261629..261688,261736..261924,262018..262517, 262561..262615,262663..262806) /locus_tag="CRE_20226" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98520.1" /db_xref="InterPro:IPR007087" /db_xref="WormBase:CRE20226" /db_xref="WormBase:WBGene00082229" /translation="MRQQSNEKSLIQQPTGAVPNIEDTPLVSVIQQHNALNMMKQQAL QKLNGAGGSLQNMNPISPYPWNQSNSMMVRQQSTGLEQALLKSIEMMTAQSAFFAPMA QTAMNLNLMMIKLHEESREERKRIEEGHRAERQKADERHYEHISNFVAQFTKVVSSLQ NKNGSIIESGESQINNATSSEQTKSKTQSPPPSLKRTSSSSNSKRSKSPPAKKISLDR SRIAKKTGIPVSPGSRSENSEQNLESKRSHPKKNVFIDQVIIGKGTGYNEALKKFTSY RCLFCPIGFSTENKLIEHCESVHKNVLNNKKSRRIHPSK" gene <264337..>267325 /gene="Cre-pal-1" /locus_tag="CRE_20227" /db_xref="WormBase:WBGene00061701" mRNA join(<264337..264464,264956..265031,265084..265380, 265442..265535,265808..265979,267283..>267325) /gene="Cre-pal-1" /locus_tag="CRE_20227" /product="CRE-PAL-1 protein" /db_xref="WormBase:WBGene00061701" CDS join(264337..264464,264956..265031,265084..265380, 265442..265535,265808..265979,267283..267325) /gene="Cre-pal-1" /locus_tag="CRE_20227" /note="contains similarity to Pfam domain PF00046 Homeobox domain; contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR001356 (Homeobox); coded for by the following C. remanei cDNAs: DY525224" /codon_start=1 /product="CRE-PAL-1 protein" /protein_id="EFO98583.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="PFAM:PF00046" /db_xref="WormBase:CRE20227" /db_xref="WormBase:WBGene00061701" /translation="MSVDAKSEFSENDSSTTSSPTTVANTSWSNYPMMPFINPQPLKD KMLQQSFDPQLYGRWPQMGDTGFYGHPDIYSSFGLPQLASNSQIPSTESVDVKPPLSN GSSSSDSGMYPSPNDITPFPSTSSGVTSSASSSDLSAAAAAAANYQMNAATCYQQSVW PFMDYQHPFTWKMPLSSGGKERRASSVSKILPTGPGTNNVRVRTADKYRMVYSDYQRL ELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRRDKQKIRL" gene complement(<267782..>268704) /locus_tag="CRE_20319" /db_xref="WormBase:WBGene00061702" mRNA complement(join(<267782..267925,267974..268101, 268150..268256,268314..268509,268605..>268704)) /locus_tag="CRE_20319" /product="hypothetical protein" /db_xref="WormBase:CRE20319" /db_xref="WormBase:WBGene00061702" CDS complement(join(267782..267925,267974..268101, 268150..268256,268314..268509,268605..268704)) /locus_tag="CRE_20319" /note="contains similarity to Pfam domain PF08242 Methyltransferase domain; contains similarity to Interpro domains IPR013217 (Methyltransferase type 12), IPR002052 (N-6 adenine-specific DNA methylase, conserved site); coded for by the following C. remanei cDNAs: DR781858" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98557.1" /db_xref="InterPro:IPR002052" /db_xref="InterPro:IPR013217" /db_xref="PFAM:PF08242" /db_xref="WormBase:CRE20319" /db_xref="WormBase:WBGene00061702" /translation="MPDKKVLWMLNQLEGFEKPKIKLEQYATSSELAVSMMEMINDLV GLDGVKLVDVGCGCGMLMTTAATLYEPESVLGIDLDEDALKVCARNIEFADVQERCEV LQADVLDSETDLPRGTFDVAIINPPFGTKNNTGVDMKFVQVGLELIRTGGSVFSLHKS STRDFILKTANKWENVKADCCAQMRWCLPATYKFHKQKAVDIDVDLIQFKKSGPTENK ETTSSQ" gene complement(<269280..>274027) /gene="Cre-tag-325" /locus_tag="CRE_20320" /db_xref="WormBase:WBGene00061703" mRNA complement(join(<269280..269420,269538..269791, 269843..270024,270070..270196,270243..270421, 270516..270625,272026..272241,272287..272755, 272851..273281,273330..273498,273669..273823, 273932..>274027)) /gene="Cre-tag-325" /locus_tag="CRE_20320" /product="CRE-TAG-325 protein" /db_xref="WormBase:WBGene00061703" CDS complement(join(269280..269420,269538..269791, 269843..270024,270070..270196,270243..270421, 270516..270625,272026..272241,272287..272755, 272851..273281,273330..273498,273669..273823, 273932..274027)) /gene="Cre-tag-325" /locus_tag="CRE_20320" /note="contains similarity to Pfam domains PF00620 (RhoGAP domain), PF00169 (PH domain), PF00397 (WW domain); contains similarity to Interpro domains IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type), IPR015767 (Rho GTPase activating), IPR001202 (WW/Rsp5/WWP), IPR000198 (RhoGAP); coded for by the following C. remanei cDNAs: DT934245" /codon_start=1 /product="CRE-TAG-325 protein" /protein_id="EFO98484.1" /db_xref="InterPro:IPR000198" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR015767" /db_xref="PFAM:PF00169" /db_xref="PFAM:PF00397" /db_xref="PFAM:PF00620" /db_xref="WormBase:CRE20320" /db_xref="WormBase:WBGene00061703" /translation="MTTAVQPSSEVSGFGGGPAGSRASDLIQFQEIMSESNESSSSSS HTNLTANTSNVLPRGSNEQSPVDDPSHVYTNIREIEELNSRPVPPTPRNDAQPRRDLL NGWYEYETDVGRTFFYNKETGKSQWIPPRFIRTPAQVQEFLRATRTNLDTTFSFQGTS TLSSEEQKENKEDKSNEDDRKSQSVEDEEVFDEICDVEEEKEMFFEPPSRPLPIPSST DDEEDINIEQKSAEQHVENGDDGFSDSDFEEEYQAPTTARKISSASGAMIHHPYVQMS TFQSTFPRSKDEDNDKHAPYMVPPDANESTKASNPIRVRRPSPSSLRSVSFQNKCTVL KNVPMPQVLPTTSTSYDLPQYHNTPDRPSFVEDSVEFTQSLRCEERRGSSEGREPVRT IRCGDMERSEKEEQLEKSIKPKKKEWIMNYMYLTTAHLILYKDQKSAEKHGKHYDAPQ GVWDLRGATVTWYQDDRDFLKKKQRKYIQLELCNTKKYLLRCSNDTEVVEWYKSLVEV VEKLPAPGSSNQAMIDVTNSIARNPSYIGSTRPLSHALIPISRSMRRRDDPMSQSAIE SMSTSATVDESRPSKETILEKLRRFFRTRPTVESLKEKGIYKPEPVFGSTLSAICQHE NSLVPKFIRVITEVIESKGLETDGIYRVSGNLSAVQKIRCQADQDNYKALVAEEDIHV LTGALKLFFRELSDPLFPISLHKEYTSAMQMPNATNRFKKFEELLGRLPNENRETLKM LLRHLNRVASHSSQNRMQQHNLAIVFGPTLFHNGDGAVNSAAKNKKAAKKTKPSKKEE SQQTPIQSNSHLAFSMIMQSQIVQYLLESANKFDILKAPVNIGR" gap 271072..271081 /estimated_length=10 gene complement(<275544..>284679) /gene="Cre-mel-28" /locus_tag="CRE_20321" /db_xref="WormBase:WBGene00061704" mRNA complement(join(<275544..275717,275767..275964, 276006..276067,276121..276228,276283..276696, 276741..277101,277181..277543,277587..277797, 277841..277960,278682..278758,278986..279321, 279371..279682,279787..281561,281613..282127, 282175..282659,282717..282836,282887..283523, 283571..283850,283900..284007,284055..284303, 284403..284540,284589..>284679)) /gene="Cre-mel-28" /locus_tag="CRE_20321" /product="CRE-MEL-28 protein" /db_xref="WormBase:WBGene00061704" CDS complement(join(275544..275717,275767..275964, 276006..276067,276121..276228,276283..276696, 276741..277101,277181..277543,277587..277797, 277841..277960,278682..278758,278986..279321, 279371..279682,279787..281561,281613..282127, 282175..282659,282717..282836,282887..283523, 283571..283850,283900..284007,284055..284303, 284403..284540,284589..284679)) /gene="Cre-mel-28" /locus_tag="CRE_20321" /note="contains similarity to Vanderwaltozyma polyspora Putative uncharacterized protein.; TR:A7TJN8; coded for by the following C. remanei cDNAs: DT933343, DR409262" /codon_start=1 /product="CRE-MEL-28 protein" /protein_id="EFO98598.1" /db_xref="WormBase:CRE20321" /db_xref="WormBase:WBGene00061704" /translation="MENENSSIFQPYEKYECWRGEKQTILKTSIGRQLPYIVNFKKNQ CQIFNIEWERVTHSYTFPEGCNLIDVDYFPTEDGLLGILLGVEDPRQSWGAEHFVVAL VAKENVPKLEITHSAEIPTKITVVKTLFSSADMADKSNREVLNLYHRLMTWKHVVAIG CKDTECHLARLTAVEDTSSLLIPIHNDRKNLINLMGAFTDGTTLQYTQNDGSYRDYPI EGVYITALALMPRSRTLLVGLSMGGILAASLNPSNQMNFLELRHERIIREIAPLEPED DPDKFEYFIAAVDASPRHPIMIQLWRGSFKTLEEVETTEKYDRPYFAVCLEHKILFGE KWISVNPIVTEREHWMTTKKRGTDESMANVSHSFGSTSNRNSVLLSYERQKMKTTEDD PNGLPEYIVEAAVFDIDAWYYKRVPGRVSTDGTVLKQCAFLSTIKSNIRSEDVNDIGI LTSHANDVSRFSSSISDADQLFYPSALSYERIYVAKSSKIEWMKIQNIQDTILNKCAS KLSYYLQSPESISNVIIAAGLVRKNILSGSPNSSAADINHSQLSSEQKVILNLIVYYG KVKELCEIVNCSEISDTLKNEIAEWSLHEAIDYKRTISDKMVSIFQGRSYALSPLAQD AVTQGIKLFRVVYEYIKTCSKALKSSRLHNLACSVKCVRNHTKLTYQFITFNIIPVDQ ERQQKMKEMHSKRQLEAIRNSSSLPIQSIVRNMNRIAPNAQFWNDIPHHEWYPPTPVD LLESLLNVNISERIKRELVIQYIIDWIRASPNEINLTDKQIGLEIIKIMTNQMLDVDL EKIYYVLDQEKKALIDDKDGERIRALGEKVFSLQNEQISYEKLWGGGVPVDITINAYD MKRFEERMKLQLEQGECRLSVLDPESEMLYQVYLFENEKFHAMSSEAIRSNELLSMFM PGMVQNKGGTPQKSSKEREIQSSVKTMFNMQTVKEVKEKIGVKEPSVFAKVADENRRR KRSNQLDDYDDDSFSSVSSVSYVPPVSNSCKFREKQSSYFQTAKRIQQWKKAVESSPI PELPVANNSSINSLISSDDPNQHDEINMLIATPARYYKRPNDVDLEQDLLSPSADRAP PLPAQNSILKTAKAVQSANRGRIRFHESVPRGADESVEDTDKAPKGLKLNFAILEDDE EEETMTTRRSKTIEMQDEMDVEENEITQEEMENDEIEDVEEEEENEEECIESEKTFEN QDDFEVLEDSSAPGKNIEEDTFEPEENDVTAAINETFESNKTEEHQEEEDIEERIEIE ERMEELKEREIEEEVEGEEGKEAVQEEETLDVVQETEKKDEEEDKKQEEEKDVEEKEK EIEKEEDIAEDIIQSSAEVQSEDESEPIEVAGEMEPSENIVSVKQSQAIVELAEENQQ ETVSGEQEKTEEVQEDEQEMPTKTEDQSEMKEIEISKISEVPVETEEVVEIGETEKGG KDVAGTSYEVREVINSVPTETSIEEERPPSRNTRSRSIQKTPAPVTKTLEAEQYSSTP SRRTRSASRQRDVVVEEPEPSRTSRSSTRQMALKNRTPSELLDALFPRDELEKKRAEK TQSKKTRTSRSESANRRSASRTRSVEVPDTLVEQNTPKRGRPRKTSETVSSPEKRKRG SSVPTETETPTKRARGRPRLTPLKAIPEDEPSTSNSRNEGTSETSAAVPGRVSKPKPL EDVCEEDEDVPVQELYRVLLLKMNIETQFFFTSKKFQTQNDTLGYTYHGKYHLAGVYD MSQILREHPKVRRNVDGKFKIIATEENQDLVALIAKQKDNKGKKRGVSGKGGRRAVTS IGHHHRSGLILRSSPKFSNGMRPTSSTGKANIAKQFSNAPNFGRPLTSVASRPTTSKL GGAPGMFYNRQSSFGTTPNKIPAPAKAPTLPLQRPLVRPKTASSVSSNSASLVSSRST VTVAPPSISAQPPNHIPSIKEFSDNAKIMMLKLYPESIHLSEMTERYSQEYGNPVEPL QLFSKSWMMLVKSTFKEWLQIKDGEVSLKEDWFARFGSALKKSLSINASGHTKTSEVP SKSATSVSSSSIPTTLPINQGFRYQIPASQPKSPVELATQQMRGLTMGARHALRTPDK PPGLAPKNSSKLMVTVFPGFQSVQKNSKSTTSNGVIKIGSSENSAYTYRAVSRSSPDA MNVDCLRAGFQHATENSKLPRESFDLAAYQKVLSVDRSYDAKQLRNLKMVEKTNTLKD TVAEALNENPQLKKTAMKPLRTSPSGTRANASYPSGRNSTGNREPNNRIIGRALADIH KQNDEQKPLMKNKSVREETSSFESKSKYDEKSLYVSSSATPTSNKKTEVNSSKDSDSD DGWSISDQSDKTVTNSPPPVSTRKPVLPPMSKGASSKPQLRSRPVSMCSSISSLDSYE RALHATLPDDEAW" gene <286181..>287790 /locus_tag="CRE_20228" /db_xref="WormBase:WBGene00061705" mRNA join(<286181..286241,286312..286464,286510..286658, 286709..286893,286941..287083,287127..287243, 287288..287591,287664..>287790) /locus_tag="CRE_20228" /product="hypothetical protein" /db_xref="WormBase:CRE20228" /db_xref="WormBase:WBGene00061705" CDS join(286181..286241,286312..286464,286510..286658, 286709..286893,286941..287083,287127..287243, 287288..287591,287664..287790) /locus_tag="CRE_20228" /note="contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type); coded for by the following C. remanei cDNAs: DY529247, DR782270" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98554.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="WormBase:CRE20228" /db_xref="WormBase:WBGene00061705" /translation="MMLAPQLFRDIIRPCPGCDTPYDIRLHAPHVLPCSHTFCLMCLS KHEQRKKRNCLICKAKYSKFAPNLALMEVSERIDERRAFLEADTRQCDECDNRVVKST LRRCETCEKQLITRTEYKLECIVCLECCVNSHNGHTFSRINTAPSSSIESSPMVQQRA RHPSTSSAVSVHFRHPSTVSGRLSTKGLINTIKSWSIRSSSNELSFVLSPPSKLAFSE EDIVMQCQSPFYEEEEQQKQQHELIRNRMSSSRYICYDTKNPDDVSVDSVFVESPQSL PKTLAPKLSSTLTGRSSPIQNKNDSGVVMSTPSPSSRDAPSTLTSSHHFSRSATSLRI PSPSTTSKIQTIQNFFGTSRVSRNNRIRMGVTDLVNTPCRPMPHPRYTSTPNDLNNGQ YSERSTYPATPIIRPKPQYF" gene <288241..>289163 /locus_tag="CRE_20229" /db_xref="WormBase:WBGene00082243" mRNA join(<288241..288293,288347..288445,288490..288590, 288635..288774,288824..288937,288984..>289163) /locus_tag="CRE_20229" /product="hypothetical protein" /db_xref="WormBase:CRE20229" /db_xref="WormBase:WBGene00082243" CDS join(288241..288293,288347..288445,288490..288590, 288635..288774,288824..288937,288984..289163) /locus_tag="CRE_20229" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98643.1" /db_xref="WormBase:CRE20229" /db_xref="WormBase:WBGene00082243" /translation="MIRLLYLSLIFFILCVDKCSSSSCKSIVCPKQSGKQISCDLCHT CLNNGSRFCYTSDHKNCQCATVVPPTCGFGASNYTFCHLLDDVRLPPPEIIVHDEHSV SAVVPRFFQEAPFDSIKPSFLYLLALFSKNGSECNSFGHIEAYHRNQDKCLLRIRVQM PKIDYTGTDNYYYDDRSPLESQFSKDLFGTAENVTFWNEVTIRRDEKLQNSSLAFATV LKSDRVDYVL" gene <289839..>291291 /locus_tag="CRE_20230" /db_xref="WormBase:WBGene00061706" mRNA join(<289839..289905,289955..290089,290209..290313, 290354..290590,290984..>291291) /locus_tag="CRE_20230" /product="hypothetical protein" /db_xref="WormBase:CRE20230" /db_xref="WormBase:WBGene00061706" CDS join(289839..289905,289955..290089,290209..290313, 290354..290590,290984..291291) /locus_tag="CRE_20230" /note="contains similarity to Pfam domain PF00057 Low-density lipoprotein receptor domain class A; contains similarity to Interpro domains IPR002172 (Low density lipoprotein-receptor, class A, cysteine-rich), IPR013032 (EGF-like region, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98623.1" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR013032" /db_xref="PFAM:PF00057" /db_xref="WormBase:CRE20230" /db_xref="WormBase:WBGene00061706" /translation="MLHFLFFLSRIEYSFGQLPGPNDYPGKIGGRCGLFQFDCDPTAR TPLCIPLVAVRDCTPDCPNMSDEWCGHGTILCDAGVGQKRCGKCVRPQDMANLCLDRK WQHLCAYQGTYKCAKTMNCVFAKWLMDGKDDCGDGSDEDVCRHGLVSCSGSVPSPTTI LEPVTSTEKPKETKKKPIYKKDRCELGEFRCLNGECLDISRVLDGQEDCADASDESRF NEVSSMLNPVFIFRSDYCEMHDGVCNTAARCSFQRDVGAFGCGCPKGFARNPTGICEI EENRMKH" gene complement(<291454..>301412) /locus_tag="CRE_20322" /db_xref="WormBase:WBGene00061707" mRNA complement(join(<291454..291607,291703..291790, 291841..291930,294981..295130,295375..295584, 295634..295873,295918..296524,296569..296874, 296921..297114,297161..297459,297508..298238, 298610..298731,298779..298911,300854..301053, 301337..>301412)) /locus_tag="CRE_20322" /product="hypothetical protein" /db_xref="WormBase:CRE20322" /db_xref="WormBase:WBGene00061707" CDS complement(join(291454..291607,291703..291790, 291841..291930,294981..295130,295375..295584, 295634..295873,295918..296524,296569..296874, 296921..297114,297161..297459,297508..298238, 298610..298731,298779..298911,300854..301053, 301337..301412)) /locus_tag="CRE_20322" /note="contains similarity to Pfam domains PF00008 (EGF-like domain), PF07645 (Calcium binding EGF domain) (6), PF06119 (Nidogen-like) (2)contains similarity to Interpro domains IPR000742 (EGF-like, type 3), IPR006209 (EGF-like), IPR000152 (Aspartic acid and asparagine hydroxylation site), IPR006210 (EGF), IPR003886 (Nidogen, extracellular region), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site), IPR013091 (EGF calcium-binding); coded for by the following C. remanei cDNAs: DT936634, DR782353" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98502.1" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR003886" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013091" /db_xref="PFAM:PF00008" /db_xref="PFAM:PF06119" /db_xref="PFAM:PF07645" /db_xref="WormBase:CRE20322" /db_xref="WormBase:WBGene00061707" /translation="MREGGEVLVVLLIHLSLVFGLHPFSGHQRYRRQILDEPNQQIDL NITVPYIFSARLYTYGSNRGDISIHGRQEIYKLENPIHFMGNVYDTIYISRDGSVGFT EKRQKPSALPVEEPTIAVFWQPATLGNVWYRETSDVNIMNLAHNEVNIQYRYGSQFRV RSVVLITWEGVKDPLVPESEGNTFQLALIIGDSMTFAHFIYSKLNYNTNAIAGFSTGE SSYSLPDSATHDAILLSEKSDIGIPGEWLFRVDGDHIYLCGAGFKGLECIESCAPSQW FNDCSKSCHCDGGDSCDQENGRCPNGKCSPGWAGEPICDEDLDECEMGIDNCPNEQPD CLNTPGSFLCLCFEYDESRQKCKNSKPAPPSAPIPVDVIPMHPTFTRKPAQAKVKASP RTRFKSTTAAATTQMVTTHSSTSSLTTIREKPMATPLLTTEVVTKPTTTTTVVTTPSA CSRCDQNAKCSNGICTCSKGFTGDGFRCYDVDECQIPGAVCGDHSICSNTIGSFECSC HGGYRFEDDKCQDVDECRETPKICGDPNKGTRCINKDGSFECLCKDGYEGDPSSECKD VNECKNTDACGPNSHCTNTEGGYECECLPGFERIAEGAHCTDRDECAVEPCHPAATCS NTRGSYKCECIDGFVGDGKTCHETILYPISNDSTVIPRSWDSSTAIPLSKPITVFGKM FSKIYLSTNGIISFEEPLQGLIDHADTLKKPAIFALHAQFDYIKDGLVAYTYINGEFT ENIMNCNHSRLSDTDEVTLPLLMRSSIGIQTSMGIENFNTKRLHIFTFDRVRQSGSEN FNSFQIVLAESDKDATILSLIYEKVQARGPMTGISTPTGFLMLPNNRLTSGSNVGQPG KWMYRVDMMTLQACPPGRIGEPLCDRECAAGHYGIKCESTCHCDGSVACDVITGMCPG ALCRAGWEGLSCDQDIDECGMNLVTCAVGSECVNTRGGYRCDCKKGFVPVGKECKQID RCLSRFSVPCSRNAECVELESSDPKCVCRKGYHGDGFRCTIRENVKSAGGSHLVSDLT HHLMEVASDSSNTTDSSTSSSSENPFVMKNWIPDRVGETTPIPQRPKFVTVQTPPLFY TAPPIKPKFADKDMDLLDGDKPRAEESGSPPSVLIIVIVAISVIWIVLTILVFGVMYM NKRKQRNMERQQYAAMRGWKGGQFHSRASRMITTSNPNVIYGQTPRITPYESY" gene <302589..>303866 /locus_tag="CRE_20231" /db_xref="WormBase:WBGene00061708" mRNA join(<302589..303011,303057..>303866) /locus_tag="CRE_20231" /product="hypothetical protein" /db_xref="WormBase:CRE20231" /db_xref="WormBase:WBGene00061708" CDS join(302589..303011,303057..303866) /locus_tag="CRE_20231" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98540.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE20231" /db_xref="WormBase:WBGene00061708" /translation="MQSSDEGDDPMPRDDEELKTKKDKYKVLALLGKGGYGAVYSVLR LSDSEKFAIKCENANTCRKALYMDCNVLKGAAQIKSRHFCTVVDQAAVKDRFNFIVMK LIGKNLWDLRMDTPECRFSLGTALKTAAQCLVSIQQLHKFGYLHRDIKPGNFAAGRKE SNEHHTIFMLDFGLCREFVKRGEGKLRTQRANAPFRGTTRYAPLNSMLELDTGRKDDI ESWLYMVVEWTSGGLPWRKLKASDRDKVLQFKKELRNREDLQEDMFYSCPKKEFFRIL KVSYHFSTSFHSDYFQYTDSLDFYATPDYGFVYYCIKHAADANKIKDTDPLDWDPNTP YFGPIEVPGDGAVIELEVENRMSAEGSINKTRKEKGKKNEEKENEKYRTRKRENKKND EDEKMKNKKDLEAALKKS" gene complement(<304337..>307332) /locus_tag="CRE_20323" /db_xref="WormBase:WBGene00061709" mRNA complement(join(<304337..304537,304585..304721, 304766..305015,305060..305552,305692..306119, 306167..306651,306696..307007,307051..307261, 307306..>307332)) /locus_tag="CRE_20323" /product="hypothetical protein" /db_xref="WormBase:CRE20323" /db_xref="WormBase:WBGene00061709" CDS complement(join(304337..304537,304585..304721, 304766..305015,305060..305552,305692..306119, 306167..306651,306696..307007,307051..307261, 307306..307332)) /locus_tag="CRE_20323" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PRV5; coded for by the following C. remanei cDNAs: DR781619" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98576.1" /db_xref="WormBase:CRE20323" /db_xref="WormBase:WBGene00061709" /translation="MRKQNRPNQTARKQMQNLTVELFARDKNARRQLIDEALSVSSTI PVNDISPSKTPEQPAISPTPEPIQELVQVLLAPEPGNHIPRKPRSPRKSAPAKPKTVP KISQPNPVQQTEKSEQQDKPEVVQKSENGTTVKPQDSLTPVSNPDSSKVVVDELQQAE KKKQHVESAEKIEPKAMPEVSVSETLSVTDPVSPAVPSAQSPAQSPVEDEEPFVPPPP LQRVPYEAQSSHLANIRAVTESMNIAAFPSQSQLSQQHHQQHQQQQQHQQQYQQQHPQ QQQSQLKIQEPMSFAACVRKQPSIESMSISPSPYSKFDGKTSPFNTGGNMGGFSNQGG FGGFSREPNKNPNPFANRKRFNYDYDSPSNNSHSHSNNRFFPDRSDQVRDLSDGFSAL SSKPNGFMNRGMSRESSSSGLLPNWYKGRSFSTASSHYPYSQRSTSTGQFSPFTKSSH STTLNIPSHGHVEDIDGFLASSTPSNPFFSKRSDLNMKKERWARMKAKKRMLRRPIED EFYEDPDIEEEILCGNGVMLNQIVQQSSSGNYEDADLLRKYRRDVAFVKERVLNSIDG NIDGIRDLRFLLASVQTYGNIDGECMMAELGMNEFSLFSGIIEKFHAIIGPWQTENES QRRRASRHALETHRIPLQHSIATISKRKLVEEILGRVEPSIACHQGVKVGLYSDSCNE KTRIELNIKNNFKDPGMICDKNDRRFILVLQSELDLMVESMKHLAKTVGFHYDGFPVH HNCFVIVEAFVEAISDIMNEKIDLETMRWFSLLGQKVDAEESASPWETGTNFHCARHS EPKSNFCAAVTVGRTCIIIYHVLGSFFRRYHLKKIPTALQIPSTSAPIQ" gene complement(<308066..>310301) /locus_tag="CRE_20324" /db_xref="WormBase:WBGene00061710" mRNA complement(join(<308066..308341,308387..308785, 308838..309473,309715..310167,310212..>310301)) /locus_tag="CRE_20324" /product="hypothetical protein" /db_xref="WormBase:CRE20324" /db_xref="WormBase:WBGene00061710" CDS complement(join(308066..308341,308387..308785, 308838..309473,309715..310167,310212..310301)) /locus_tag="CRE_20324" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box); coded for by the following C. remanei cDNAs: DR406897, DY526790, DR777517" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98668.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE20324" /db_xref="WormBase:WBGene00061710" /translation="MLSNNFGQVGQPYPRPYFPLQELRDDEFVQNSPLLRLNDNVLDA IVEYVPLKDRLLQLRSVCHRLSDSVKRSVKSVEFLRDELDYCDDAKISFFLAVYGKNV EHMNYDLYRSCSLREYTQWSWRQSVISSVTRCAQLKHLDILICCRHRLRDGDLHVIFK QCQQLEVLRMDASYINGHCFAKSPNTLRKIELECCRSFTKQGVLGMFGRLPKLHTLHV SLLPCIDEQVIKRIGDMKCLRNLSIVADPEQKMNQFRLAEIRRLPKLSTLCLDGVNNV TDKFLGDLCEAATSPASDSIEHLSFSFCKNIGPNGIAKLKNLPKLKSLNLDGVSKRDI STGLEAIGNVGKLERLMVSEETFVSPRTIVDFVTKCETLRTLDISANHRLKDKGFAEQ VYSARVFSFGKPMVILTDFKSMWRNLPPFSYQSRVEIVNVNDRYPEEFVESISTNTPQ QLPRGHLIPDLRRGNRYKMLDFSLDTSGEQMIDPANFDSQDQENQPPSEIGPLSVLSE QEQAELARVLMEIQQPFNAADWINFNECAFARSTVSNFEDSITVGSAGAPGPPREKGS DKILKHSRPSRPKRQAQKERAQQRRSGATNNQKVPVPTGPSFTEDDFPPLG" gene complement(<310815..>312777) /gene="Cre-rbg-3" /locus_tag="CRE_20325" /db_xref="WormBase:WBGene00061711" mRNA complement(join(<310815..310863,310895..311072, 311123..311495,311549..311655,311699..312123, 312167..>312777)) /gene="Cre-rbg-3" /locus_tag="CRE_20325" /product="CRE-RBG-3 protein" /db_xref="WormBase:WBGene00061711" CDS complement(join(310815..310863,310895..311072, 311123..311495,311549..311655,311699..312123, 312167..312777)) /gene="Cre-rbg-3" /locus_tag="CRE_20325" /note="contains similarity to Interpro domain IPR000195 (RabGAP/TBC)" /codon_start=1 /product="CRE-RBG-3 protein" /protein_id="EFO98571.1" /db_xref="InterPro:IPR000195" /db_xref="WormBase:CRE20325" /db_xref="WormBase:WBGene00061711" /translation="MNFWQESLRLARYDLPHADRPSGGLEIALKTEIMFFVQLVLRCL PYETRDWEISLSRSRNHYRILKETHLIDPHDTKFSQDPELNNPLTSIEQNPWNTFFED NDLRDIIGKDVSRTFPEIEFFQNLNIRQTMADILLVYAKEHPFANYRQGMHEILAPLI FVINLDNEAFQHAKENDELKMLTVEEEDILNCLFCKEYLEQDSYNLFCAVMLEVSRWY EEPTHSETPKQHITKEPYMRVQDSVPSSRLMEDLVDIGNLLQETDPTLAKHLSSLDIP PQLYGMFVQSFFFHFKQMFLFRRWLRLLFGREIPLHDLLFLWDVLLIDRPISPLAKCI FVSLLVQIRHLLLTSDYGGCLQYLMRYPPIADIDSFVKLARHYRNPKKNAKPMMKSNN FSHITIAGSSHPNRTQRPQRPLVVSERKKDDLESPPTILALAPVLQKMKNTIRDRSNT VSVPSSPRRSAEILTTPKKNDNWAKEVQMMEEQVSTLQTRLNEQDMMCCQISKALEIC AEDVRNAKSNDQCESLAQHLLELSKTLVSIKTVPVVPSPPRNGKNNVDFKQRVCPSKF GIYLLSAKSTKWST" gene <313464..>314429 /gene="Cre-rps-0" /locus_tag="CRE_20232" /db_xref="WormBase:WBGene00061712" mRNA join(<313464..313596,313643..313905,313947..314048, 314097..>314429) /gene="Cre-rps-0" /locus_tag="CRE_20232" /product="CRE-RPS-0 protein" /db_xref="WormBase:WBGene00061712" CDS join(313464..313596,313643..313905,313947..314048, 314097..314429) /gene="Cre-rps-0" /locus_tag="CRE_20232" /note="contains similarity to Pfam domain PF00318 Ribosomal protein S2; contains similarity to Interpro domains IPR001865 (Ribosomal protein S2), IPR005707 (Ribosomal protein S2, eukaryotic/archaeal); coded for by the following C. remanei cDNAs: DT934486, DR779239, DR779171, DY527312, DR407266, DR781080, DR408144, DT934484, DR409473, DR777223, DR779901, DT937014, DR409762, DR778463, DR775666, DY527138, DR778397, DY526210, DR781049, DR407711, DR778246, DR779498, DR782128, DT933964, DR409465, DR778118, DR782251, DR781013, DY528277, DR778078, DT936531, DY528830, DT936779, DR777120, DR409060, DT935090, DR777076" /codon_start=1 /product="CRE-RPS-0 protein" /protein_id="EFO98634.1" /db_xref="InterPro:IPR001865" /db_xref="InterPro:IPR005707" /db_xref="PFAM:PF00318" /db_xref="WormBase:CRE20232" /db_xref="WormBase:WBGene00061712" /translation="MSSGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFD GPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGR FSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIG VPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLDGKEIMPDLYFYRDPTETEKE ETGAHAEVTETQEFQQATDIDFTAQGGKVEDWAAETATWTAEGKTDEWASAAPAQSSW " gap 315461..315654 /estimated_length=194 gene complement(<316553..>317488) /gene="Cre-col-89" /locus_tag="CRE_20326" /db_xref="WormBase:WBGene00061713" mRNA complement(join(<316553..317344,317390..>317488)) /gene="Cre-col-89" /locus_tag="CRE_20326" /product="CRE-COL-89 protein" /db_xref="WormBase:WBGene00061713" CDS complement(join(316553..317344,317390..317488)) /gene="Cre-col-89" /locus_tag="CRE_20326" /note="contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-COL-89 protein" /protein_id="EFO98659.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF01484" /db_xref="WormBase:CRE20326" /db_xref="WormBase:WBGene00061713" /translation="MEKFIVGVAATASTLACLVMVITIPQLYNTILEVHDEVLDGVSV FRMETDAAWTDMMDIQITVTPPSKPRVNPFNSIFRQKRQDFSGLPAWCQCEPAKPVCP PGPPGPPGESGQPGNAGPPGPPGEDNTSTYAPITCPPKDPGCVKCPAGPAGPPGPEGP AGTAGPDGQPGSPGDAGKDGPAGPPGPDGDAGPNGDAGPNGEPGAPGKDGEKGKGEPG PAGPAGPPGPGGPPGESGSAGSDGAPGPQGPPGQDGTPGNAGPDGQPGTPGGPGLPGN DAAYCPCPPRSAVFVNRFAH" gene <321084..>321859 /gene="Cre-ras-2" /locus_tag="CRE_20233" /db_xref="WormBase:WBGene00061714" mRNA join(<321084..321200,321243..321330,321377..321741, 321794..>321859) /gene="Cre-ras-2" /locus_tag="CRE_20233" /product="CRE-RAS-2 protein" /db_xref="WormBase:WBGene00061714" CDS join(321084..321200,321243..321330,321377..321741, 321794..321859) /gene="Cre-ras-2" /locus_tag="CRE_20233" /note="contains similarity to Pfam domain PF00071 Ras family; contains similarity to Interpro domains IPR003577 (Ras small GTPase, Ras type), IPR003578 (Ras small GTPase, Rho type), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR013753 (Ras); coded for by the following C. remanei cDNAs: DY528918" /codon_start=1 /product="CRE-RAS-2 protein" /protein_id="EFO98534.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR013753" /db_xref="PFAM:PF00071" /db_xref="WormBase:CRE20233" /db_xref="WormBase:WBGene00061714" /translation="MSNGGKRPPEDDSKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVD YYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERK SFEEAHKLYNQVLRVKDRSEYPVLLVANKVDLINQRVVSEEEGRELAAQLKLMYIETS AKEPPVNVDAAFHELVRIVRSFPSDEGEHEASMASVPRAKKRKDKGKCSIS" gene <322281..>323592 /locus_tag="CRE_20234" /db_xref="WormBase:WBGene00061715" mRNA join(<322281..322367,322428..322736,322778..323158, 323210..323464,323512..>323592) /locus_tag="CRE_20234" /product="hypothetical protein" /db_xref="WormBase:CRE20234" /db_xref="WormBase:WBGene00061715" CDS join(322281..322367,322428..322736,322778..323158, 323210..323464,323512..323592) /locus_tag="CRE_20234" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98661.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CRE20234" /db_xref="WormBase:WBGene00061715" /translation="MAPSKSREGKKEQPKTNRRKASATSKMTAPANPLSDGHAPTDLA EQLAKPKNRNQMYDMVKGHAASTVPEFLKYLPENVRLPIPLRDNRRFKIGPDEEFFPG QYIRMEGAEYILVQAPTKKNYPLIWRAVQQDRVKMVVCLCHDDQMSNSDDSKCFTYFP TEPEQTMEVEHKKGKYTLVCKSREGLSMGATKYEVEITDSEAVVEKNSDDPNALNEKT RKVLVFHMNTWTGQKPESGNVLEQAQNVALFFREVKKHELNILRKSMENYVSPVLIQS FDAINRSAIGWVALMLLRDVEKRECFDVPNLMKLIMKSRMGSISTYYQFCFCMAVCLH IGKDVKWCENDCNNALTELTAKFGDRKLNELGNVAV" gene complement(<323811..>325014) /locus_tag="CRE_20327" /db_xref="WormBase:WBGene00061716" mRNA complement(join(<323811..324269,324315..324549, 324593..>325014)) /locus_tag="CRE_20327" /product="hypothetical protein" /db_xref="WormBase:CRE20327" /db_xref="WormBase:WBGene00061716" CDS complement(join(323811..324269,324315..324549, 324593..325014)) /locus_tag="CRE_20327" /note="contains similarity to Pfam domains PF01958 (Domain of unknown function DUF108), PF03447 (Homoserine dehydrogenase, NAD binding domain); contains similarity to Interpro domains IPR005106 (Aspartate/homoserine dehydrogenase, NAD-binding), IPR016040 (NAD(P)-binding), IPR002811 (Aspartate dehydrogenase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98524.1" /db_xref="InterPro:IPR002811" /db_xref="InterPro:IPR005106" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF01958" /db_xref="PFAM:PF03447" /db_xref="WormBase:CRE20327" /db_xref="WormBase:WBGene00061716" /translation="MSVHFVAHRLFYFPIQNDLVLPFSLYSFSFLSLFLFLSLSSSLG IFSIYLISISNCIETILSDRRFKSKKNGQTSSWIHWIWAFRFVLIHFLLQNYDYSGKF LVEKLRELPDEFEVMRIWNRSVGEPGVQGLETLNAENLNDIDLVVEVAHPKIIADYGE MILEHCDLFAGSPTCFANQELLEKLRNLSLMHARRLLVPSGALWGANDIQKMADIGSL KGLTVTMIKHPTSFKLGSPLFEINEQAKLKEIEETVLYEGFFQVLCFIIDCVYSGSVR GLCPLAPNNVNTMAGGALAAHNLGFDKVKAKLISDPKMTDWHVVEVRVEGDDGFEVIT RRNNPAKPGAVTGQLTYYSFLSSIKESKYKPSGIQLC" gene complement(<325319..>327275) /locus_tag="CRE_20328" /db_xref="WormBase:WBGene00061717" mRNA complement(join(<325319..325432,325482..325742, 325788..326192,326213..326308,326356..326456, 326501..326971,327028..327104,327148..>327275)) /locus_tag="CRE_20328" /product="hypothetical protein" /db_xref="WormBase:CRE20328" /db_xref="WormBase:WBGene00061717" CDS complement(join(325319..325432,325482..325742, 325788..326192,326213..326308,326356..326456, 326501..326971,327028..327104,327148..327275)) /locus_tag="CRE_20328" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98589.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CRE20328" /db_xref="WormBase:WBGene00061717" /translation="MSDEKKSSARKNNSVFQRVKKTLRQRSRESNQSKRKSTSKASER SKKDFPRFLKGKIGNRKKSSDRTKIVNTYFNFQKDCNTSRSSHSREAESRSRVELIPR SIDLEEDVDHLVGTPDLLYEIKKEETKEFDEKKDVEVKDKKEEKKIEKKEEKKEEKKE EKKEEKKEEKKEEKKEDKKDGSKEDFKTKTRKKSDEKVDVSKIEKPKTRSWLGMEPAM RFFHKHNDIQKIREEYSFLDSLTYNKTTDAFVANKQRNRHGCPKIYDENRVKLNRPGH EDVNYINASYINLKSNLQSKQFQFSHKLVVAQLPQFENESFVEDFWQMIYQEQITLIY LLVPEKALKNTPTSLFKEEHGAYQYVGKMFINNRRAEVSGDPKEYTIEVLLEGNSDSV ICQLNHHATWEHLQQAPKTRPIIKMIHQFLTEKQIQNANVCVVSVFGCGRACSFIGAL YAISQLNHGIEPDVCFKFNLKSSENPSFQICEIMKDIKQHRPSATESFTQYAGIYAIV LDYIARKRGSKRDPINKEINDFIDILTDISPAVSPTKEKSLH" gene complement(<327569..>329296) /locus_tag="CRE_20329" /db_xref="WormBase:WBGene00061718" mRNA complement(join(<327569..327887,327933..328131, 328177..328513,328563..328774,329212..>329296)) /locus_tag="CRE_20329" /product="hypothetical protein" /db_xref="WormBase:CRE20329" /db_xref="WormBase:WBGene00061718" CDS complement(join(327569..327887,327933..328131, 328177..328513,328563..328774,329212..329296)) /locus_tag="CRE_20329" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8Q8A8" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98461.1" /db_xref="WormBase:CRE20329" /db_xref="WormBase:WBGene00061718" /translation="MSNNDAVSGALFQHLFRVFSLFADQNEKGTFKPAQAEFLIDELL RELRRQTTPKVHNLPDNVTFNEFLNLLQVIFPDREDLQIATDRVFERYVNHVIGKGFV LFRKLTQKRRGCLPIRKRVSDAWQFGWLQVMPGIAKIRKQNTDIDDIVQFDEDTVIEV KSREYGESNSKLLIQTPVIDGDSSIWSVICSSSTTFQFSHLDPIMAQLFVKDMRTARD YPTREELARFDCKRSLKVRPNKEGKIRIELEKERSRLESELEEEKKNRKDEEIVRGLT TRLLKQEMEKSEQMQQVIYELRSKLVNGEEGESLGDGNDDDIEMIEDEISEDVGENEE ISITLPSREEKIQQYAYHLYATQAEEHVTSDDEEIWKQNYNLIVSTQSV" gene complement(<330236..>336524) /gene="Cre-acy-1" /locus_tag="CRE_20330" /db_xref="WormBase:WBGene00061719" mRNA complement(join(<330236..330579,330624..331134, 331183..331368,331416..331885,331932..332790, 332841..333460,333507..333603,333719..334021, 334076..334199,334434..334507,336240..>336524)) /gene="Cre-acy-1" /locus_tag="CRE_20330" /product="CRE-ACY-1 protein" /db_xref="WormBase:WBGene00061719" CDS complement(join(330236..330579,330624..331134, 331183..331368,331416..331885,331932..332790, 332841..333460,333507..333603,333719..334021, 334076..334199,334434..334507,336240..336524)) /gene="Cre-acy-1" /locus_tag="CRE_20330" /note="contains similarity to Pfam domain PF00211 Adenylate and Guanylate cyclase catalytic domain; contains similarity to Interpro domain IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase); coded for by the following C. remanei cDNAs: DR409668" /codon_start=1 /product="CRE-ACY-1 protein" /protein_id="EFO98604.1" /db_xref="InterPro:IPR001054" /db_xref="PFAM:PF00211" /db_xref="WormBase:CRE20330" /db_xref="WormBase:WBGene00061719" /translation="MDDDVGERTPALGGSCGPSVRAHSSSPRRVPLFERASARWWNPQ FRSATLEAQYWKCSFSQLRDRFRSGLIYIAVVIAAWTLYLALFDRTFIQHWIVSLCLI AIIFAMFAFTACAAQYQRFYMPTSFLCTFLICLVTLLIFSAETQAAFMTPVASLATSF QVVLLIYTVIPLPLYLCILIGIIYSILFEILNKNKIGLEEAGYIKLVLHAGVHLLGVH LFILTQVRQRKTFLKVGQSMLARKDLELETQFKDHMIQSVMPKKVADELLKDASELRR PSASNDSNCRTSNATQFDQPIAKMVPEYRKFRPFTMNLMTNVSILFADIAGFTKMSSN KSADELVNLLNDLFGRFDTLCRLRGLEKISTLGSLDIKCISHNFSDFTGDCYYCVAGC PEPCDDHACRTVEMGLDMIVAIRQFDIDRGQEVNMRVGIHTGKVMCGMVGTKRFKFDV FSNDVTLANEMESSGVAGRVHVSEATAKLLKGLYEIEEGPDYDGPLRMQVQGTERRVK PESMKTYFIKGRINEGVEEEVMQVQEVESLHSQKSSKKSTLKQKWAEKLKMNHTNSYP MRAAAREGGGSLRIKLAERNRSTQLLPKESNSICVMEDNRKSASLQALATNNFNGSNT DTNNTYSERGVTGSVSKKSVAGSESNSIKGSRSSGLQLSLQDGNSDLNSVGGLDTAIS HHHNAASLTRFDTDNNFDQRLAMVIGQGEGGFDKGFWNHHDSLNKWTLRFNEKDVEQE YRAHFVDSAERYTSSKKGHVERHQDLMEQGGDKDGITGSAVNKYRYSGVFIDIIVATL IFVIAGVVAMMSVRPFPLSLFAYFPFAAAILVLTIILIGLPLLARKKSIQCANQWMPR HLIGLLLIFLPVGVAICIMPFCTLGDCANVILNYRLAFSYVTILAIFAHCNFSQLAAW PKTTAAVLIGLLHIGGVFYCEFNLKHLIEEQDTCNVTEIVIPPIRRGLSSTIALNSTS ARTLSQDFGSPLFIWELFLDVVLSIVLVAFLNYQFETAFRMSFFGDVQARRDTERMQI VRDQADWLLNNVIPAHAVESLKTDTKYSENHETVGVLFASITNWNDMYEENFEGGREF LRVLNEVIGDFDELLDRPDFTHIEKIKTIGPAYMAASGLNPERKKNMLHPKEHLYQMV EFALAIQHVLSVFNEDLLNFDFVCKLGLNIGPVTAGVIGTTKLYYDIWGDTVNIASRM YSTGVLNRIQVSQHTREYLLDRYEFEFRDHIEVKGIDGGMDTYLLVIYTVIELKEHNI FRLEEKEKVFHRQLRQTKKTNSNRNKSL" gene complement(<337393..>340946) /locus_tag="CRE_20331" /db_xref="WormBase:WBGene00061720" mRNA complement(join(<337393..337510,337559..337749, 337796..337915,337962..338036,338083..338328, 338374..338548,338596..338764,338806..338981, 339027..339205,339262..339806,339911..340316, 340361..340529,340576..340766,340812..>340946)) /locus_tag="CRE_20331" /product="hypothetical protein" /db_xref="WormBase:CRE20331" /db_xref="WormBase:WBGene00061720" CDS complement(join(337393..337510,337559..337749, 337796..337915,337962..338036,338083..338328, 338374..338548,338596..338764,338806..338981, 339027..339205,339262..339806,339911..340316, 340361..340529,340576..340766,340812..340946)) /locus_tag="CRE_20331" /note="contains similarity to Pfam domains PF02170 (PAZ domain), PF02171 (Piwi domain); contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR003100 (Argonaute and Dicer protein, PAZ); coded for by the following C. remanei cDNAs: DR406864, DT935667, DR781777, DR781143" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98614.1" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /db_xref="PFAM:PF02170" /db_xref="PFAM:PF02171" /db_xref="WormBase:CRE20331" /db_xref="WormBase:WBGene00061720" /translation="MLPLRKTTDQYGVLPPPAVPPPNATITSDSKTANEACIARLQQL QLQPFPKIYPTTKPPGNRGSSVDIQTNVFGIEIQKRSDIYQYSVSIKTDLTSSKEVVF TKKGKEDFVVRERHGKCCSILMHAFDRYSEFFCTNENTLIYDGQSMMYSTFDLFQESS DGETKTKLLPINGNDTDHEDLKSLPYIKLEVHATKNPPVKFSQEDIGRRSSDSRIDSI HGAYHHILELALNQSCIRDFTRCMVFENGKIFFVNPLEEGFSRDDFVDVGDGKQMLPG IKKTVQFIEGPYGRGQSNPSVVIDGMKVAFHKEQPLNEKIREIISKNVTDCISDFERE RCVAVIKGLDCYTTHAKRVRHLTIEGIHHEGARKSRFQLKDGGASTVAEYFRDHYKIE LRYPNANLVVCKERGNLNFYPMELVFISPNQRVKISQQTSAQSQKTTKESAVLPDVRQ RIIMTGKIAAKISSDSKYLNEFGLSVCDEPLMVTGRILPPVKLEGRTSANMLPIKDNK WRLGQYARPAQAPKVWAMYAVGLPSSRFTPALLSKFGDEFSAMCRSKGIEMPALGDID LVLAQDIEKKLSIAADAGCTFVYIITDDAITNLHQKYKAMESLHSMVIQDMKMSKAHS VVSQGKKLTLENIVNKTNMKLGGNNYIFTDSKKYLDDILVIGVGISQPPPGNKFISEG KGLLNPMVIGFAHNGKQKQEFSGDFVLSPAGQDTLVVVEEVLKQSISGYQKWHDGQCP KRIIMYRSGVSEGSQGNVIAYELPLIRSTIDSFSKKIQFVYIAVSKDHSYRFFKSNLN TLTKSNTAISKGQQSSVTGSRSAMPAAGAPKAWDLNIAPGIIVDSVITNPACSQFFLN SHITLQGSAKTPLYTVLSDDTHASMASLEELTYNLCHLHQIVGLPTSLPTPLYVANEY AKRGRNLWNEAYSRNPVPRGTGSESELLQELSNAINYKAFGSFLDRRVNA" gap 342163..342308 /estimated_length=146 gene <342735..>347921 /gene="Cre-emb-5" /locus_tag="CRE_20235" /db_xref="WormBase:WBGene00061722" mRNA join(<342735..342865,342913..343168,343297..343638, 343703..344289,344334..344853,344907..345260, 345304..345603,345653..346546,346592..346762, 346855..347671,347728..>347921) /gene="Cre-emb-5" /locus_tag="CRE_20235" /product="CRE-EMB-5 protein" /db_xref="WormBase:WBGene00061722" CDS join(342735..342865,342913..343168,343297..343638, 343703..344289,344334..344853,344907..345260, 345304..345603,345653..346546,346592..346762, 346855..347671,347728..347921) /gene="Cre-emb-5" /locus_tag="CRE_20235" /note="contains similarity to Pfam domains PF00575 (S1 RNA binding domain), PF09371 (Tex-like protein N-terminal domain); contains similarity to Interpro domains IPR003029 (S1, RNA binding), IPR006641 (Resolvase, RNase H-like fold), IPR017072 (Transcription elongation factor Spt6), IPR012340 (Nucleic acid-binding, OB-fold), IPR000980 (SH2 motif)" /codon_start=1 /product="CRE-EMB-5 protein" /protein_id="EFO98528.1" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR003029" /db_xref="InterPro:IPR006641" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR017072" /db_xref="PFAM:PF00575" /db_xref="PFAM:PF09371" /db_xref="WormBase:CRE20235" /db_xref="WormBase:WBGene00061722" /translation="MDFIDNQAEESDASTDRSDDEEPQSKKLKLSKDKSKKKKKVVAS SDEDEDDEDDEEEGRKEMQGFIADEDDEEEDARSEKSDRSRRSEVNDELDDEDLDLID ENLDRQGARKKNRVRLGDSSDEDEPARTANRDDDDLQSERGSDDGDRRHHRGGRGGGG YGSESDRSEDDFIEDDGDAPKRHRKRHRGDEHIPEGAEEDARDVFGVEDFNFDEFYDD DEADDGLEDEEEEIIEDDGEGGEIRIRRKKDTSKKTTLLESIEPSELERGFLSAVDKK IMIEDAPERFQLRRTPVTEADEDELEREAQWIMKFAFEETSVTNQSSFDMNDKLECMM NMDNSNQEERKRAVIDAIKAVLRFIRVRSNSFEVPFIGFYRKESIDNLLTLNNLWTVY DFDEKWCHLSEKKTKLYDLMRRMREYQELSDDLTAKRRPISEMDLIEINFTETLEQLT DIHANFQLLYGALLEDMTKWEKARRTGEEEGHEYRAKFKSSIRNDKYQMCVENGIGEL AGRFGLTAKQFAENLDWRKHDIEQDTAFPLDAAEEYICPAFMDRETVLNGAKFMLAKE ISRQPLVRNRIRQEFRNNAHFWVKPTKKGRETIDESHPLFDKRYIKNKPIRNLTEEEF LYYHKAKEDGLIDMVFMYESDEDQEANNYLVNKFLSDSIFRKDEYTENVEQWNAVRDE CVSMAINEMLVPYMRDEVYNTILEEAKTAVAKKCRKEFASRISRSGFQPENDNHDDDD DDVDDHGARRIMAVCYSTVREEASFGVMVDENGSIVDYLRMVHFTKRTMAQGNTGALK RESMDLFKKFVQRRRPHAIGLNIEDMDCTRLKRDLEEAVQELYSQNMIIRQIPVFLMD NEAAKVYMRSNISVAENPDHPPTLRQAVSLARILLDPIPEYAHLWNSDEDIFCLSLHP LQREIDQEQLALVLNHELVNKVNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATALLK SIKANDNLIESRSKLVVGCKLGPKVFMNCAGFIRIDTHKVSDKTEAYVEVLDGSRVHP ETYEWARKMAVDALEVDDSADPTAALQEIMESPDRLRDLDLDAFADELNRQGFGEKKS TLYDISSELSARYKDLREPFLEPRGEDLYNLLARCGKEIKEGSKVLGTVQSVQYRKVD QEAIGSMIPESIDDRFKCPCCKTFIADSPAGIQEHLVNGAHNGGCPGTAVGIRVRFDN GMTGFCPNKNISSSHIDNPLTRVKINQPYYFKVLKLDKERFSLFLSCKSTDLKDDDPG QRDDFWDQQTYEDDLTDMKNETKKKESNTRVKRVIAHPNFHNVSYESATKMLDGMDWT DCIIRPSANKDSGLSVTWKICDRVYHNFFVKESAKDQVFSIGRQLSVGGEDFEDLDEL IARFVQPLIQVSHDITTHKYFFTRGTCEDSEAVEAFVHEKKRELGRSPYVFSASYRQP CQFCISYMFDNTNRIRHEYFKIVPGGVRFRHQNFDSLERMLVWFKRHFHEPPAELRRT LPQQPQYRVAPPQSAPYYPSHQFVPYH" gene <348298..>350775 /gene="Cre-him-18" /locus_tag="CRE_20236" /db_xref="WormBase:WBGene00082234" mRNA join(<348298..348356,348403..348458,348504..348621, 348668..348766,348810..349113,349160..349840, 349887..350573,350620..>350775) /gene="Cre-him-18" /locus_tag="CRE_20236" /product="CRE-HIM-18 protein" /db_xref="WormBase:WBGene00082234" CDS join(348298..348356,348403..348458,348504..348621, 348668..348766,348810..349113,349160..349840, 349887..350573,350620..350775) /gene="Cre-him-18" /locus_tag="CRE_20236" /codon_start=1 /product="CRE-HIM-18 protein" /protein_id="EFO98578.1" /db_xref="WormBase:CRE20236" /db_xref="WormBase:WBGene00082234" /translation="MNDSSPKNTFLAHSISSAPRRPQKHGSVQSIVRDETAKKASMPF EEIVLSDDEEEKLVDSVKCKTCSRDMTHWINSRRDIHNKVCKAKQADKDTDKKKTTKS KTLTETMEKEDEILEKPIKETQSSLKSWELSKNNVKFARIAADDEENRKRKRPRSFAV VELAPKKCQCEVLTTLHSRFIDNFHCKPIKNVCGKMESVTEHAFQMKKLIEKLSRYEQ LSSDMQKTLDDTSEISTPIISICSSEGHEIKCLSLILKHRTSMIRMHPRSEIIVISQT KEVIKSWLTFVFTANIEWTEDEKEGVKQLANQYGPVGLEVLLNENVEIEKKEEEAIEE TEPVIQCAFQECDTGGETPFPVNKESRNSQQKSANLPVDEEHNPVNYYSSDDPFIGFG RTNEDEEIHDKSKNITSDIALDTTVSSVQKHSRNNTTMDSFDEWSNQPADMPSTSSPM TSVTPVRNNFKPIFGSHVKILKTNDITPMPLFDSMDESELKERMKAIGQRPKGRKAMI TILKKAYTTLHPEVCTGTPTIRPLVRNEITDPDAGNGKKPTKSVKFGIQKTKTLNERM ADSPKKSSMRDTSLKNVSNDSIESDADNDAEKTLNLSNDEREVGKVCGDDIGEDEEED EDATSSSSGKSDLNSLRVFFLNWLRDDQNTVLHEHILSLQPVSLEEMLVRLEKAEGPL GRIGKGKLVKILEMLKITYQLPQKPGRARIGGFKRKL" gene complement(<351142..>352413) /locus_tag="CRE_20332" /db_xref="WormBase:WBGene00061723" mRNA complement(join(<351142..351361,351420..351578, 351626..351935,352230..>352413)) /locus_tag="CRE_20332" /product="hypothetical protein" /db_xref="WormBase:CRE20332" /db_xref="WormBase:WBGene00061723" CDS complement(join(351142..351361,351420..351578, 351626..351935,352230..352413)) /locus_tag="CRE_20332" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98574.1" /db_xref="WormBase:CRE20332" /db_xref="WormBase:WBGene00061723" /translation="MPFKTRINLAATSKGEREFVKSMKVECKLFVIEDLSRRSSNLLR YPDLHSKVSGKSGECDSKLQKSLIIVIDSKCVQFSHLFTFIGSSYDDVESIHKTYNSF EPYSFDVYMQKTTIKYIWPFSLLSVARYGLNNWMNMKSRDRALCDQLLDKDLRILILH DSFISQEKMHDYMEKWTRGGISDKFCWWAISTHSNFEVEEIIYQLPVQFIEEKCGPKF SFSKESYKKPKVPQTVKIVSYIVFSYVDPRIRATLFIRDNMVLFANAGAAPSIDKFGL ITYTTRSGIHETQF" gene complement(<353941..>354917) /gene="Cre-tag-189" /locus_tag="CRE_20333" /db_xref="WormBase:WBGene00061724" mRNA complement(join(<353941..354213,354266..354372, 354426..354796,354877..>354917)) /gene="Cre-tag-189" /locus_tag="CRE_20333" /product="CRE-TAG-189 protein" /db_xref="WormBase:WBGene00061724" CDS complement(join(353941..354213,354266..354372, 354426..354796,354877..354917)) /gene="Cre-tag-189" /locus_tag="CRE_20333" /note="contains similarity to Homo sapiens Isoform 2 of Post-GPI attachment to proteins factor 2; ENSEMBL:ENSP00000300730; coded for by the following C. remanei cDNAs: DY527523" /codon_start=1 /product="CRE-TAG-189 protein" /protein_id="EFO98475.1" /db_xref="WormBase:CRE20333" /db_xref="WormBase:WBGene00061724" /translation="MALGEDDILSVPFKYFVFCIGGLPSSALLICVLLSLFLHFDQST STHCEVANWLPSISAAVSTYTPEKYIWRILIGLHIGPRLVVAVAFRNFLLSSPLRPYT GSKQFRFLCNLACCLNLLENFFLLALTSISSSEDHALHAKCFGGFAISSIIYMILSTW LFSESGRRRATNMGERSYEYKILGASIFVVCFFLGGYLYWRHNTYCEPGIYTLFALVE YSAVLSNIFFHCTLYYDFHGKNIALTSSFGSSHYNLLPTQIEKDT" gene complement(<355124..>356070) /locus_tag="CRE_20334" /db_xref="WormBase:WBGene00061725" mRNA complement(join(<355124..355339,355387..355711, 355793..355877,355977..>356070)) /locus_tag="CRE_20334" /product="hypothetical protein" /db_xref="WormBase:CRE20334" /db_xref="WormBase:WBGene00061725" CDS complement(join(355124..355339,355387..355711, 355793..355877,355977..356070)) /locus_tag="CRE_20334" /note="contains similarity to Pfam domain PF00252 Ribosomal protein L16p/L10e; contains similarity to Interpro domain IPR000114 (Ribosomal protein L16); coded for by the following C. remanei cDNAs: DR780362" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98481.1" /db_xref="InterPro:IPR000114" /db_xref="PFAM:PF00252" /db_xref="WormBase:CRE20334" /db_xref="WormBase:WBGene00061725" /translation="MINLRAVCKSSVSWSLSTRGMKKYPFPVTYENVRFPPNGQLKLP AMPAEPSYDLEKGEKKYKSTKRMIEARGVEEVHTELIHEQYGLAAVSGGFIDSDDFKF LQDRINKNLIDNQFAVWRVDEPWLPRTKKAQGTRLGGGKGSIQKYVTPVRANRIILEV GGYITEIEAKAFLLYLCERFSFPVEFVSETMLAERRRKTEEIRMMNKNVFSWDKVIKY NMQNCNSWLSNYDIAWKGKYR" gene <356444..>359439 /gene="Cre-clp-2" /locus_tag="CRE_20237" /db_xref="WormBase:WBGene00061726" mRNA join(<356444..356506,356587..356751,356800..357082, 357127..357410,357531..357691,357740..357980, 358024..358248,358297..358756,358805..359042, 359086..359317,359365..>359439) /gene="Cre-clp-2" /locus_tag="CRE_20237" /product="CRE-CLP-2 protein" /db_xref="WormBase:WBGene00061726" CDS join(356444..356506,356587..356751,356800..357082, 357127..357410,357531..357691,357740..357980, 358024..358248,358297..358756,358805..359042, 359086..359317,359365..359439) /gene="Cre-clp-2" /locus_tag="CRE_20237" /note="contains similarity to Pfam domains PF00648 (Calpain family cysteine protease), PF04212 (MIT (microtubule interacting and transport) domain); contains similarity to Interpro domains IPR001300 (Peptidase C2, calpain), IPR007330 (MIT)" /codon_start=1 /product="CRE-CLP-2 protein" /protein_id="EFO98566.1" /db_xref="InterPro:IPR001300" /db_xref="InterPro:IPR007330" /db_xref="PFAM:PF00648" /db_xref="PFAM:PF04212" /db_xref="WormBase:CRE20237" /db_xref="WormBase:WBGene00061726" /translation="MDEKATKSAFELSQKAVHYDQGKKYEEAIFCYTEAGNQLLKLVQ EKRCLPIFRKNVMECINRAEFLKENIDNLQRQYPPSNDDISHNVEFLMIKASVLQNYG NKLEESRSLYENVVEQCLGVSRNSNLSQETLKKLRQTAESALKCIEELVTLKNKVTEV ELLLPEVPVDDLSKLVFNDHKTPSPSTSQPFNSPTHQVVPPSPSNSQKFTKEELDVLS ATSNINNKLYVPFHSYDKVGEFKGQNGKFTDPDGKIGLTQKQRLKLKGWKRVSELFEN PTIISSIDCHTIRQTVISDCSFISSLSIAALYEKRFKKQLVTSIIHPQDANGKPIYNP AGKYMIKFHINGVWRKVVIDDYFPVDENNRMMCSQTENKGELWVSLLEKAYMKVMGGY DFPGSNSNIDLNALTGWIPERIELNESSKANPDAIFRKLFDRFHRGDCLITLATGKMS EEMQKRSGLVETHAYAVIDIRSVENNRLLKVKNPWTHSRWKGNFSDKDKLNWTAKMKN ALSFDPEVAAGKDDGIFWIDYESVRHFFDVIYVNWKLELFPFTSVYHATWKQEMGPIR DVYTVGDNPQYTLTVNVGQKTTAAAVWILLTRHITAIDDFAVNKEFITLIVYETGQKI YIPTNPRPISDGVRINSPLYLCQLLNTKPGVTTYTLVVAQYEKTNTINYSLRVFSTTD VKLEPIMLPYSISKTIRGNWDGSEKHPIMKLVLHSKSDDIALFMELKAPKQFCIALEM KQYLSDRTVFLETKSSGAYRPGYTVLTLEKVPAGTYYIKASTYTAGDKGPFILRIDSS CKFELETIKI" gene <359657..>360636 /gene="Cre-sel-13" /locus_tag="CRE_20238" /db_xref="WormBase:WBGene00061727" mRNA join(<359657..359928,360201..>360636) /gene="Cre-sel-13" /locus_tag="CRE_20238" /product="CRE-SEL-13 protein" /db_xref="WormBase:WBGene00061727" CDS join(359657..359928,360201..360636) /gene="Cre-sel-13" /locus_tag="CRE_20238" /note="contains similarity to Interpro domain IPR003604 (Zinc finger, U1-type)" /codon_start=1 /product="CRE-SEL-13 protein" /protein_id="EFO98644.1" /db_xref="InterPro:IPR003604" /db_xref="WormBase:CRE20238" /db_xref="WormBase:WBGene00061727" /translation="MSLNPMIAKQKPNGNIQCLVCNTEIKPKIWTAHVNGKKHRESID KLRSSAQKRGKESSARSADEPPNKKQKEVSEQGPLTIPSDFFDEEDSTPFRKDESKAS IGGHNANLIEGVPAGFFDDKRLDGNVRETRERNAELDAEYERWKEEIGEEQVDQDAKA EEMEAAVQRELELERIDEQMAALKKLNDMEIQKEKRLNQAKERRMKREEQEEESDDDG EDIDIDSLDWRAKNIFS" gene complement(<360902..>361949) /gene="Cre-dnj-18" /locus_tag="CRE_20335" /db_xref="WormBase:WBGene00061728" mRNA complement(join(<360902..361132,361177..361488, 361728..>361949)) /gene="Cre-dnj-18" /locus_tag="CRE_20335" /product="CRE-DNJ-18 protein" /db_xref="WormBase:WBGene00061728" CDS complement(join(360902..361132,361177..361488, 361728..361949)) /gene="Cre-dnj-18" /locus_tag="CRE_20335" /note="contains similarity to Pfam domain PF00226 DnaJ domain; contains similarity to Interpro domains IPR015609 (Molecular chaperone, heat shock protein, Hsp40, DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal)" /codon_start=1 /product="CRE-DNJ-18 protein" /protein_id="EFO98467.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR015609" /db_xref="PFAM:PF00226" /db_xref="WormBase:CRE20335" /db_xref="WormBase:WBGene00061728" /translation="MFRLTRCGQRRSLFGSVPCSSQQDHYKVLGLAQSASQKDIKSAY YKLSKQHHPDTNPTDKEEAAKKFHQVEIPHVAMAYEILGSEDKRKAYDMTRIKSSPMP GDSSSFSNRYRRRTASNSKQYTDIDIDYKDFEHFQRSTRRRPQYHSHFDMPNEFYAEF GGFKKRVFKSEYEEAQEKHGTMYKDGRAAQREMEELRRQVEREQAAQQSRYPIPTFEQ MMREKRAKEANEARQYMVGMFVTAVVAGFLTVLLSR" gene complement(<364298..>366594) /locus_tag="CRE_20336" /db_xref="WormBase:WBGene00061729" mRNA complement(join(<364298..364466,364515..364857, 364917..365399,365450..365565,365610..366291, 366342..>366594)) /locus_tag="CRE_20336" /product="hypothetical protein" /db_xref="WormBase:CRE20336" /db_xref="WormBase:WBGene00061729" CDS complement(join(364298..364466,364515..364857, 364917..365399,365450..365565,365610..366291, 366342..366594)) /locus_tag="CRE_20336" /note="contains similarity to Pfam domains PF02806 (Alpha amylase, C-terminal all-beta domain), PF00128 (Alpha amylase, catalytic domain), PF02922 (Isoamylase N-terminal domain); contains similarity to Interpro domains IPR004193 (Glycoside hydrolase, family 13, N-terminal), IPR006048 (Alpha-amylase, C-terminal all beta), IPR013783 (Immunoglobulin-like fold), IPR013781 (Glycoside hydrolase, subgroup, catalytic core), IPR006047 (Glycosyl hydrolase, family 13, catalytic region), IPR006589 (Glycosyl hydrolase, family 13, subfamily, catalytic region), IPR013780 (Glycosyl hydrolase, family 13, all-beta); coded for by the following C. remanei cDNAs: DR781395" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98565.1" /db_xref="InterPro:IPR004193" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006048" /db_xref="InterPro:IPR006589" /db_xref="InterPro:IPR013780" /db_xref="InterPro:IPR013781" /db_xref="InterPro:IPR013783" /db_xref="PFAM:PF00128" /db_xref="PFAM:PF02806" /db_xref="PFAM:PF02922" /db_xref="WormBase:CRE20336" /db_xref="WormBase:WBGene00061729" /translation="MVNTRPPKIDELLKIDPYLHDFQDEISRRYGVFLDYQHRIDECG GMEAFTTSYKEFGLNVQPDNSVKGLEWAPAAEKLALIGDFNNWDQNANVYKKEEHGKW SLTVPASSDGSCAIPHNSVIKIAVSRNGQTHFKLSPWATYVTCPNPKETVIYHQNFWN PSEKYQLKEKRPARPASLRIYEAHVGISSYEGKINTYRVFADDVLPRIKNQGYNAIQL MAVMEHVYYASFGYQVSNFFAVSSRCGTPEDLKYLVDKAHSLGIFMLLDVVHSHASKN VEDGLNQWDGSNGGYFHDNARGFHNLWDSRLFDYTQIETLRLLLSNVRWWVEEYGFDG FRFDGVTSMIYHSHGMNDSFSGGYPMYFGLNADTDSLVYLMLANDFLHKKYPFMVTIA EEVSGMPGICRPVEEGGQGFDYRLAMALPDMWIKILKHTSDEDWKINDIVFNLENRRY AEKHVAYAESHDQALVGDKTIAFWLMDKEMYDFMSTDSPLTPIIERGLSLHKLIRLIT LGLGGEAWLNFIGNEFGHPEWLDFPRVGNGESFHYARRQFNLVDAEYLRYKFLNNWDR EMMQLEERTGFLHKGYAYTSWKHDGDKVVVFERGGLVFVINLHPNKSFADYSIGVNNP GSYHIALNSDDAQFGGHSRVNNDTKFHTFDDGYAGRRHRLQVYIPCRSAIVLEKDEE" gene complement(<366899..>368170) /locus_tag="CRE_20337" /db_xref="WormBase:WBGene00082224" mRNA complement(join(<366899..367456,367711..367874, 367921..>368170)) /locus_tag="CRE_20337" /product="hypothetical protein" /db_xref="WormBase:CRE20337" /db_xref="WormBase:WBGene00082224" CDS complement(join(366899..367456,367711..367874, 367921..368170)) /locus_tag="CRE_20337" /note="contains similarity to Interpro domain IPR000626 (Ubiquitin); coded for by the following C. remanei cDNAs: DT935566" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98494.1" /db_xref="InterPro:IPR000626" /db_xref="WormBase:CRE20337" /db_xref="WormBase:WBGene00082224" /translation="MSDSDDNLDDDYLERRRVALQKKRQPVRVYESDSDDDFPSKKKL VAKRQREIEESKDSDDDSFVEKPDRRGEHQKHRIEDVEGEYRRKIFRTDTVIHVQNEK NDALGKAMRLAEKMCHSKSTESPERVIDQPEDPADSSIVAASFPVTVTIVDCVSRLSS TGLINKHDLPLTSTFSEIRNGLAEKWKCRVDEVTLTYNGKVIGDSETLRDIGMSPLQM PQPKVEAFKEEKKAPEVFTVEGTPDHITIKAQLKDRKKPIHIEVLKETTVEEMMQKVI NVLSEGGEKCIPTIETMKVMFDDEYCINTQTCEELGLEEADCIDIYC" gene <368999..>370142 /locus_tag="CRE_20239" /db_xref="WormBase:WBGene00061730" mRNA join(<368999..369202,369247..369360,369407..370000, 370050..>370142) /locus_tag="CRE_20239" /product="hypothetical protein" /db_xref="WormBase:CRE20239" /db_xref="WormBase:WBGene00061730" CDS join(368999..369202,369247..369360,369407..370000, 370050..370142) /locus_tag="CRE_20239" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98561.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CRE20239" /db_xref="WormBase:WBGene00061730" /translation="MVAQNPASISAGGRKQPQKQEKVQKKPQKKIWVVKLQRIPFGFF EKELLGYFRQFGNVLRIRVARSRKTGNHKGWAYVGFDNKSVAEIAAESMNGYLMFEQR LGCKVMKPALIPKSMLKGPLLVMRPSYLGLAKKDSIARNNASGKNDSANTKRRSNNLN KTLAKLQNMGINYDFPVAGTVNKPPKKVVDNDVQVIESTKSILPKQITPKAVTHSTPK AATLKTATAKAETPKQNTPKAVTPKVATPKQTSPKTPTPVAPKKVVIKTPQTEKVKKV EKISFSPKTRAAKAAALGTPQAKSTLSKTIMKSVAASARPAAVEKKAAAKSRGKKKSL " gene complement(<370266..>372659) /locus_tag="CRE_20338" /db_xref="WormBase:WBGene00061731" mRNA complement(join(<370266..370365,370596..370737, 370783..371395,371439..371844,372571..>372659)) /locus_tag="CRE_20338" /product="hypothetical protein" /db_xref="WormBase:CRE20338" /db_xref="WormBase:WBGene00061731" CDS complement(join(370266..370365,370596..370737, 370783..371395,371439..371844,372571..372659)) /locus_tag="CRE_20338" /note="contains similarity to Pfam domains PF00310 (Glutamine amidotransferases class-II), PF00156 (Phosphoribosyl transferase domain); contains similarity to Interpro domains IPR000583 (Glutamine amidotransferase, class-II), IPR005854 (Amidophosphoribosyl transferase), IPR000836 (Phosphoribosyltransferase), IPR002375 (Purine/pyrimidine phosphoribosyl transferase, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98610.1" /db_xref="InterPro:IPR000583" /db_xref="InterPro:IPR000836" /db_xref="InterPro:IPR002375" /db_xref="InterPro:IPR005854" /db_xref="PFAM:PF00156" /db_xref="PFAM:PF00310" /db_xref="WormBase:CRE20338" /db_xref="WormBase:WBGene00061731" /translation="MCGIFGCVAVGNYENLNILAANGLASLQHRGTESSGLVGSDGVT RDHVEIIKGHGLVRDVITEDNISRMDGQSIIIGHNRYSTAGKKKSGINCVQPFVVYTA MGTVAIAHNGELVDTKQKRKEVLHEGVGLSTDTDSELIAQMIAKAIALNVKCKYGQDI GDITRELAVTMSALNMSYSLLVMTFDRLYAIRDPFGNRPLCVGTVLSSEGKPEAFIAA SESCAFPANSKLDFEVRPGEIVELSSNGIKSVWQVRKQNFQVMSFEIQMKPNTPLAMC IFEYVYFARNDSEIEGQQVQTVREECGRTMALEDDLEADIVGNVPDSSLSAAIGYSSQ SGIAYEPVLHRNSYVGRSFIQPNDEMRQNAINMKFGVLKKKIQNQRIVLVDDSIVRGN TMRTLVKMLRDAGAKEVNMNLFIGFQSKKESNDQPISPLGIALLASLANIPFPLTCD" gene <374168..>375096 /gene="Cre-tag-243" /locus_tag="CRE_20240" /db_xref="WormBase:WBGene00061732" mRNA join(<374168..374244,374293..374389,374435..374584, 374660..374925,374973..>375096) /gene="Cre-tag-243" /locus_tag="CRE_20240" /product="CRE-TAG-243 protein" /db_xref="WormBase:WBGene00061732" CDS join(374168..374244,374293..374389,374435..374584, 374660..374925,374973..375096) /gene="Cre-tag-243" /locus_tag="CRE_20240" /note="contains similarity to Drosophila melanogaster Flybase gene name is CG3630-PA; FLYBASE:CG3630; coded for by the following C. remanei cDNAs: DR779650" /codon_start=1 /product="CRE-TAG-243 protein" /protein_id="EFO98573.1" /db_xref="WormBase:CRE20240" /db_xref="WormBase:WBGene00061732" /translation="MPIGSASDTIRKFNAVAQANEETLKKNPYSESYKIQQFDSRNYG RPPPGSKTEARGIKAGVHVCREILFLCETIDSNAEGEEPHKWVKFGKLFNIYSFYSDK VRDYLILVGMLIRARKYGLVHFEGEMLYQRQDDEKLITMLMSLQEIRESLTASGDPAN CIQIRRNSAPIAFVPPETKEKPKLRPIRSDSVTSSKSKFESSAPPSTLEEDSHSVQGK PKKPWTPKDSSKAPVFCTY" gap 376555..377246 /estimated_length=692 gene complement(<377614..>378887) /gene="Cre-srg-11" /locus_tag="CRE_20339" /db_xref="WormBase:WBGene00061733" mRNA complement(join(<377614..377683,377729..377973, 378019..378228,378254..378714,378755..>378887)) /gene="Cre-srg-11" /locus_tag="CRE_20339" /product="CRE-SRG-11 protein" /db_xref="WormBase:WBGene00061733" CDS complement(join(377614..377683,377729..377973, 378019..378228,378254..378714,378755..378887)) /gene="Cre-srg-11" /locus_tag="CRE_20339" /note="contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)" /codon_start=1 /product="CRE-SRG-11 protein" /protein_id="EFO98523.1" /db_xref="InterPro:IPR000609" /db_xref="PFAM:PF02118" /db_xref="WormBase:CRE20339" /db_xref="WormBase:WBGene00061733" /translation="MPDTIFRANISNEYDPIVFNCSSDYEKSTEIVKYILQIVYLIPG GLLNILIIRTILFKHWEIYGKNSFFMIYSTDCIISFVMISIDIVVRMFIYFTPLCPVL APYFFEPLIVFKVIMIIINHSKASKSIIQIFLVLNRMSCVLYPLKYSLMWKKPVKLVI VSIFVIPFTTDWNLIISRVYMQPTFGGFYMEYIKKVSWIDYKSINYQAGQSRFQLFFI SIALIFTVICTSITFYSLITLPKRIKNVEKSLSFATAYISMSFIVLAVFQILFAFFSS IFTTSAVFGYALLSYDILNVGFVFTCFQPETIAKSFSSPIILICVSRKLRCHVFGLQS KKPRVARVFSMTVSQIPKNSELQEERYRKSVVLERVNY" gene complement(<379435..>380724) /locus_tag="CRE_20340" /db_xref="WormBase:WBGene00082245" mRNA complement(join(<379435..379498,379546..379724, 379771..379953,379996..380139,380182..380400, 380494..>380724)) /locus_tag="CRE_20340" /product="hypothetical protein" /db_xref="WormBase:CRE20340" /db_xref="WormBase:WBGene00082245" CDS complement(join(379435..379498,379546..379724, 379771..379953,379996..380139,380182..380400, 380494..380724)) /locus_tag="CRE_20340" /note="contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98657.1" /db_xref="InterPro:IPR000609" /db_xref="PFAM:PF02118" /db_xref="WormBase:CRE20340" /db_xref="WormBase:WBGene00082245" /translation="MSSFILPSNFSYDDPLPFQCVNDNNTTLSISFYIIQASYLLLGS VLNALIVKLIIFSNKNSYKTNSFYILYTADAIVTIYHSIIEVLFARVISFITPLCPIL SPYFFTPSVITKIYAILIHYSTSFRIISQIFMSFNRMTCVILPFKHEKIWRVIIYPVL ICSVVIPLDTTWILLFSRVYINPNGAGFSVNYKEPAGWPTLALVHLIECVFCIALVIS CFIFTIMGLTRLKNRIKKAERSLTFVTMIMAFQTLLLAIIQIYFAFFGSSTPNIRRIL VKVFPFVIDSLNVFSPIALILMNRPLKNDILKRKENNLSGNSRSASTTQQQNIFRISP KLTSN" gene complement(<381004..>382330) /gene="Cre-srg-10" /locus_tag="CRE_20341" /db_xref="WormBase:WBGene00061734" mRNA complement(join(<381004..381079,381124..381302, 381349..381531,381580..381723,381768..381986, 382094..>382330)) /gene="Cre-srg-10" /locus_tag="CRE_20341" /product="CRE-SRG-10 protein" /db_xref="WormBase:WBGene00061734" CDS complement(join(381004..381079,381124..381302, 381349..381531,381580..381723,381768..381986, 382094..382330)) /gene="Cre-srg-10" /locus_tag="CRE_20341" /note="contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)" /codon_start=1 /product="CRE-SRG-10 protein" /protein_id="EFO98531.1" /db_xref="InterPro:IPR000609" /db_xref="PFAM:PF02118" /db_xref="WormBase:CRE20341" /db_xref="WormBase:WBGene00061734" /translation="MSSTRFTLPVNFSYDDPLPFQCNENLNLGVSLAMYGLQVSYLIL GAALNFLIILTIFKSKSGSYRHNSFYILYAADAIMGIYINIAEVLFGRLFIYITPLCP IVSPYFFTPSVITKFYYAAVHYSLGFKTFSQIFMSFNRMTCVIFPLKHLKLWNKILYP VLVILVILPLGVIWNILISRVYINPNGAGFSVNYKDTVQWATISLLHLIHCSICLVLV IFCFIVTIIGLATLQQRIKSAERSLTVVTLIMSVQTMIFAFIQIYFAFFASYTPSIRG ILLITVSFVFDSMNVFGPIALIVMSRQLRKDVFNLRSDDTQPVSRSVSTTSHHRPLSR AVSTVVAPVTG" gene complement(<383822..>384947) /gene="Cre-srg-13" /locus_tag="CRE_20342" /db_xref="WormBase:WBGene00082228" mRNA complement(join(<383822..384007,384048..384422, 384471..>384947)) /gene="Cre-srg-13" /locus_tag="CRE_20342" /product="CRE-SRG-13 protein" /db_xref="WormBase:WBGene00082228" CDS complement(join(383822..384007,384048..384422, 384471..384947)) /gene="Cre-srg-13" /locus_tag="CRE_20342" /note="contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)" /codon_start=1 /product="CRE-SRG-13 protein" /protein_id="EFO98515.1" /db_xref="InterPro:IPR000609" /db_xref="PFAM:PF02118" /db_xref="WormBase:CRE20342" /db_xref="WormBase:WBGene00082228" /translation="MVSLPSENESIPFECDNSYDSTFELIKYVFQVCYLSINLILNLM ILRVFIFSKNKIFRESPFFLIYAADLIMVSVFSLGYSVEQFQGIYMSISEIFVGRLFI YVISLCPILAPFFFSPSIFLKTFFILSHYSQGFKTVSQVFLSFNRMTSVIFPVSYQQI WKRINVPCLVVLFVLPIGVIWNIILSRVYANPSSGGFSANYFKAISWVFSDLTDISHN NKHVQASVSKLHLIFFIASLILIILFSGITIYGLFVLKTRLKKAETSITIATMIISIE FSILAAIQIYFAFFSSLTSPWRPYLLKALDFTYDFLNLSTTIVFILFNQQLRLKLFKW RKQNKIVEVSR" gene <389166..>390697 /locus_tag="CRE_20241" /db_xref="WormBase:WBGene00061735" mRNA join(<389166..389286,389641..389993,390043..390281, 390331..390438,390583..>390697) /locus_tag="CRE_20241" /product="hypothetical protein" /db_xref="WormBase:CRE20241" /db_xref="WormBase:WBGene00061735" CDS join(389166..389286,389641..389993,390043..390281, 390331..390438,390583..390697) /locus_tag="CRE_20241" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98624.1" /db_xref="InterPro:IPR007087" /db_xref="WormBase:CRE20241" /db_xref="WormBase:WBGene00061735" /translation="MYVVINTDPGDTLNELMAFMTQKTITFSVTDCLAKLHDRPDKWK EVGTQTEEDDRFYSPPSKKSKLSNGDNTDCVSPCSSATPSESVDLGIVIKTNGNGNNN WDEEESKVLRGLIKTENDRSSGSLREEPEEDTSVEDVMNSELIQTQLMQALFSKSQNG VINGFSGLEDEESLDGKSGLLSDFQEQFRMDGSPASAIRYKPAYASTKRGVCHVCNRE VSLITTHRRRHAITHLGFKTLKCALCYKFFSRQDLATGHFKKDHPTAEFTPFVDTMSN EDEQKLVVMMGMCFPEEMGPRKRKEGDSKKDRGDE" gene complement(<391318..>393502) /gene="Cre-cdka-1" /locus_tag="CRE_20343" /db_xref="WormBase:WBGene00061736" mRNA complement(join(<391318..391455,391873..392277, 392328..392403,392663..392824,393089..393209, 393256..>393502)) /gene="Cre-cdka-1" /locus_tag="CRE_20343" /product="CRE-CDKA-1 protein" /db_xref="WormBase:WBGene00061736" CDS complement(join(391318..391455,391873..392277, 392328..392403,392663..392824,393089..393209, 393256..393502)) /gene="Cre-cdka-1" /locus_tag="CRE_20343" /note="contains similarity to Pfam domain PF03261 Cyclin-dependent kinase 5 activator protein; contains similarity to Interpro domains IPR004944 (Cyclin-dependent kinase 5 activator), IPR013763 (Cyclin-related)" /codon_start=1 /product="CRE-CDKA-1 protein" /protein_id="EFO98490.1" /db_xref="InterPro:IPR004944" /db_xref="InterPro:IPR013763" /db_xref="PFAM:PF03261" /db_xref="WormBase:CRE20343" /db_xref="WormBase:WBGene00061736" /translation="MGANLTSPLPHHHRTQTTSVCNHLFSPGDGGPTFAPQRDSNTSS RNSSSAKESVLMQGWNWSKRNIQPVMSRRSLPKSGSSSEATSSKSSDSLVSFTRNVST STSSQYGKLSISLDRNQNYKTVPRPADTTTIIPNYYSLREEFRRGLQINTRQDLVNNN LTANELSVISSPKHVPRPRSLRDDSVNDDISPGDQQENVISEKRGTKKTIIQASTSEL LRGLGIFISKNCDVSDFDPAHLVTWLRSVDRSLLLQGWQDIAFINPANLVFIFLLVRD VLPGKLNGVQNEKSILKIIDERHLIHTLEELHAWILSCLYVSYSYMGNEISYPLKPFL IGNDRNTFWNRCVAMVTSHSRKMLLLNSSSTFFTEVFTDLKHCSTSSE" gene complement(<396725..>398728) /gene="Cre-pqn-29" /locus_tag="CRE_20344" /db_xref="WormBase:WBGene00061737" mRNA complement(join(<396725..397722,397802..398089, 398135..398229,398281..398479,398647..>398728)) /gene="Cre-pqn-29" /locus_tag="CRE_20344" /product="CRE-PQN-29 protein" /db_xref="WormBase:WBGene00061737" CDS complement(join(396725..397722,397802..398089, 398135..398229,398281..398479,398647..398728)) /gene="Cre-pqn-29" /locus_tag="CRE_20344" /note="contains similarity to Trichomonas vaginalis G3 DEAD/DEAH box helicase family protein.; TR:A2D755" /codon_start=1 /product="CRE-PQN-29 protein" /protein_id="EFO98507.1" /db_xref="WormBase:CRE20344" /db_xref="WormBase:WBGene00061737" /translation="MNIRYFTFLIASVLCESNFTESATIKNDTTPLVDLSKVVARDQG AIVVAAFPAISTIRSKNKKKFGLGAFEKTTSNTGATFSRRGSSTGNPYSSGYQGLPES QSSIPGDRMGGMTRSGKRTFGSYGSVDTAKGQSSANRAGTGSGWRGSSRNNDRENDDW NNGSNNFNSNSNKNNRMNKYGNRNDGDEYNNQDNWNSGSNSNGGYSGSNGSGSGGAGG WGNGDNDDGWNNYNSNNNGNRNNKNSNNNHGNSWGTNDNDNENSKNNGNSWQGSGGNG NNENWGGQGGDGDSNYGNEGSWKPSGSGNNYGRNRGNGGDEWGSNNNNDGDNLSNNWN GGSSGGSGNGDNDNWGSNGNNGNSNSGGSWNNGGNGGGGNDNWGSNNEDNDNGGSGGN YGSNKWNGNQDNDNEKFGGYNKNNGYGSNNNNDGWGPSNNGGNYGNSNWNNGGGGGWG SSNNNGNDGNNNGNWESNNNGGGGNNGGNDNWNGNDNNGNYGNNGNNNGNNGNEDEDY GDWYSMKMKDPIANGASAAETVTSRDPEVERKIAELTNMDTYRKM" gene complement(<398905..>399666) /locus_tag="CRE_20345" /db_xref="WormBase:WBGene00082242" mRNA complement(join(<398905..399030,399157..399561, 399607..>399666)) /locus_tag="CRE_20345" /product="hypothetical protein" /db_xref="WormBase:CRE20345" /db_xref="WormBase:WBGene00082242" CDS complement(join(398905..399030,399157..399561, 399607..399666)) /locus_tag="CRE_20345" /note="contains similarity to Pfam domain PF01682 DB module; contains similarity to Interpro domain IPR002602 (Protein of unknown function DB)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98633.1" /db_xref="InterPro:IPR002602" /db_xref="PFAM:PF01682" /db_xref="WormBase:CRE20345" /db_xref="WormBase:WBGene00082242" /translation="MNIIFILSIFCNLIFELVFGCPPSLSSLNLPPPVIHTECLTRNS CQRGYICRLNRCVGGRAFGSKTRQLQSDVSEQTCHKKFQFIQVSERSLRMNQCCSNKL LPERCMEFCSMSNYNESSVFRLLSEPYRCPVSSLEIINYCASQNYDHRECCQMKMVPE SCLNLCLPSDEKTHFDGSKLHCLQYITAMKACFESQ" gene <401619..>403605 /locus_tag="CRE_20242" /db_xref="WormBase:WBGene00061738" mRNA join(<401619..401721,402048..402338,402576..402800, 402853..402998,403047..403121,403191..403274, 403420..403483,403538..>403605) /locus_tag="CRE_20242" /product="hypothetical protein" /db_xref="WormBase:CRE20242" /db_xref="WormBase:WBGene00061738" CDS join(401619..401721,402048..402338,402576..402800, 402853..402998,403047..403121,403191..403274, 403420..403483,403538..403605) /locus_tag="CRE_20242" /note="contains similarity to Pfam domain PF00481 Protein phosphatase 2C; contains similarity to Interpro domains IPR001932 (Protein phosphatase 2C-related), IPR000222 (), IPR014045 (Protein phosphatase 2C, N-terminal), IPR015655 (Protein phosphatase 2C); coded for by the following C. remanei cDNAs: AF507020, DR782541" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98539.1" /db_xref="InterPro:IPR000222" /db_xref="InterPro:IPR001932" /db_xref="InterPro:IPR014045" /db_xref="InterPro:IPR015655" /db_xref="PFAM:PF00481" /db_xref="WormBase:CRE20242" /db_xref="WormBase:WBGene00061738" /translation="MGQTLSEPVTKKESASCANENYLVGSSCMQGWRVDMEDAHTHLL SLPDDPKCAFFAVYDGHGGSKVSQYSGINLHKKVVARKEFSEGNLKEAIERGFLDLDQ QMRVDEETKDDVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARALSYDHKPSHET EARRIIAAGGWVEFNRVNGNLALSRALGDFAFKTCESKPAEEQIVTAYPDVITDKLTS DHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICEELLTRCLAPDCQMGGLGC DNMTVVIVGLLHGQSPDNLFAKCARPAVFTGVNSEDGGHIQQDISRVINNFDGEQRVL TQEDDDDNEPAPANFQV" gene <404684..>407547 /locus_tag="CRE_20243" /db_xref="WormBase:WBGene00061739" mRNA join(<404684..404824,404876..405161,405213..405313, 405392..405471,405515..405700,405749..405966, 406016..406113,406165..406324,406373..406654, 406684..406789,406825..407053,407095..407413, 407537..>407547) /locus_tag="CRE_20243" /product="hypothetical protein" /db_xref="WormBase:CRE20243" /db_xref="WormBase:WBGene00061739" CDS join(404684..404824,404876..405161,405213..405313, 405392..405471,405515..405700,405749..405966, 406016..406113,406165..406324,406373..406654, 406684..406789,406825..407053,407095..407413, 407537..407547) /locus_tag="CRE_20243" /note="contains similarity to Pfam domains PF02769 (AIR synthase related protein, C-terminal domain), PF00586 (AIR synthase related protein, N-terminal domain); contains similarity to Interpro domains IPR001220 (Legume lectin, beta domain), IPR000728 (AIR synthase related protein), IPR010918 (AIR synthase related protein, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98652.1" /db_xref="InterPro:IPR000728" /db_xref="InterPro:IPR001220" /db_xref="InterPro:IPR010918" /db_xref="PFAM:PF00586" /db_xref="PFAM:PF02769" /db_xref="WormBase:CRE20243" /db_xref="WormBase:WBGene00061739" /translation="MTKFHLKLHAKAVESRKISQIQRDFEKKSKKKLDISVEYCYHLV TEEPEFIESNWQKLETLLSHSPFEKSVWNESKLDSKHGKVIEIGPRTAVKTAACTNIL NVFDSAGIQNIERVERGIRYLVPENVDENTFFEIAADKMTEVIYPSDVKLDDESYSIE KVFLIDVLASKQNLIEANKQLGLALDQSDLDFYYDFFVNKVKKNPTDVELFDLAQSDS EHSRHWFFRGEIWIDEKKREKSLMTSILDTLKHSNDNSLIAFCDNSSSIRGFEKVWRL RPSDPSIASPMVSISSPSHLIYSAETHNFPTAVCPFQGATTGTGGRIRDIHATGKGAY EIAGTVGYSFGNLNIPGLELPWEDESFEYPASISEPIAVEASNGASDYGNKFGEPVIC GFARSFGQRLGNGERCEYLKPIMFSGGIGAIDEDEVRKEPCSPYQKVVKIGGPVYRIG VGGGAASSVSVQGNRENQLDFAAVQRGDAEMGGKLHRVVRSCAERNEGNPLMAIHDQG AGGNGEGTYRNVIKELVEGCGVTVDSNSFQLGDESISLRELWTAEKVFFQENDAALVD PSLLEALQTIAKREKCHISVVGDVVAEQRVKLIGKSGEIAVDLDTRQLGEREKKIFNL KHVPRRSTWKSLETSNSSQQKVFNHFFSCFKTSLFRYLTCKVDRSVTGLVAQQQCVGP LHTPLADVAVATLSHFDTVGLLKNFEPLCPVENNRTNYERSCHFIRTRGRSELSGN" gene complement(<408233..>410668) /locus_tag="CRE_20346" /db_xref="WormBase:WBGene00061740" mRNA complement(join(<408233..408450,408500..408615, 408672..409144,409189..409429,409473..409582, 409666..409908,410050..410325,410375..>410668)) /locus_tag="CRE_20346" /product="hypothetical protein" /db_xref="WormBase:CRE20346" /db_xref="WormBase:WBGene00061740" CDS complement(join(408233..408450,408500..408615, 408672..409144,409189..409429,409473..409582, 409666..409908,410050..410325,410375..410668)) /locus_tag="CRE_20346" /note="contains similarity to Pfam domain PF00560 Leucine Rich Repeat; contains similarity to Interpro domains IPR000483 (Cysteine-rich flanking region, C-terminal), IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98581.1" /db_xref="InterPro:IPR000483" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="PFAM:PF00560" /db_xref="WormBase:CRE20346" /db_xref="WormBase:WBGene00061740" /translation="MRIHVLMLFTSIFPSIRTDICSHCDCDFLSHTVVCNRPSLLVRT VSMLPNIQQLHLNTLNLPQPPHFLFHPNLRVLRMSRCGMHEIPASTFLPLPGLEVIDL SNNHLETLPPTVLRSLKFLRVLILTNNRISNLDQLAWILSPGVVLEQLDLSGNPIAIA TSMTVFPPVRQLFLSDTRMESVNETTIMFKKLPGKCEKDVCRHIPIHNLNVSIITTVD FSTNRDLEIDSGALTVFSNATYVDLSNTRLPIGFEEWLERKSRVKSLNISHCQLPLHE DTWTACGQFLHSLDISGIGAKRLRFSRFCPIRTVFARDNLLSSVYIDAVSIESLHLER NMFSDFPIPPLGVELTELHTLSLSHNLMTSLPPHALQSYPNLQHFDISNNQLSEIDPQ AFPSIGLGLISLDLSSNQLSSLPHPILPSLLLLDLSSNTISHLDPHFFTGLPMLQQLR IASNPTLFSRCPNRESSCWSDHLDELTSLVDLDISNSGLEFSLHLRHLRTLKSLLLRG NEIRVIDAKSLPENLRTLDLGENRVQFTSNFSKLEHLRDLRVDQNPLRCDCSLYDIVP HLLNQTQISDPLLYYCFSGSWQYPLLPYLASVKPCVDTTRNFYSILITTFVIAFAIVA ALIGGFLVYRKYAERANFVYKRISLVESPVRL" gene <412002..>414402 /locus_tag="CRE_20244" /db_xref="WormBase:WBGene00082225" mRNA join(<412002..412055,412104..412229,412253..412447, 412513..412683,412732..413289,413336..413429, 413478..413616,413659..413938,413983..>414402) /locus_tag="CRE_20244" /product="hypothetical protein" /db_xref="WormBase:CRE20244" /db_xref="WormBase:WBGene00082225" CDS join(412002..412055,412104..412229,412253..412447, 412513..412683,412732..413289,413336..413429, 413478..413616,413659..413938,413983..414402) /locus_tag="CRE_20244" /note="contains similarity to Pfam domain PF02769 AIR synthase related protein, C-terminal domain; contains similarity to Interpro domains IPR010918 (AIR synthase related protein, C-terminal), IPR002016 (Haem peroxidase, plant/fungal/bacterial)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98505.1" /db_xref="InterPro:IPR002016" /db_xref="InterPro:IPR010918" /db_xref="PFAM:PF02769" /db_xref="WormBase:CRE20244" /db_xref="WormBase:WBGene00082225" /translation="MSYKHLMQSSAMKGGIFPVGGAVSLGEQPIKMLINAEKGARMCI SETIMNLVWAPITDLKKIASFLKDVKMSGNWMWAAKCEGEGARLVDAVGSLCEGLRQI GCAIDGGKDSLSMAVTAHGELVKSPGTLVLSAYAPCTNVTKVVNPALTATPGSKILWI RCGGDKNKMRLGGSALAQVYSQIGDDCPDIEDFTEISKVFSTVQDLLLMDKLIGTVLH PIVLAGFSFVFEIICFRSRRFAGHDISDGGLITAILEMAFAGNVAVDVNIRNTKEHIS PIDLLFAEECGIIIEVLNSEDVIRKLEDVNIECQVIGTASETYGPDAHIRIHVDDKLE INEKLVDLREEWELVGDKLGEFQTNMKSLKEAKEFRGKCRKINYKCDFEWFYETSFIY HEQYFSTAPLVAIIREEGSNGDREMASAFTLAGFQTFDVTMTDILSGHTLDAYRGVAF VGGFSYADVLGSARGWAAGVMFNEQVSKQFEHFRLRTDTFSYGVCNGCQLMAQLGWIG DEREGNACLETTVFLDENECGRFESSFGPVKIEKCKSIMLSGMENAILGLWSSHGEGR FTYRSSEILQNLRENGQVCVRFCDDQGKIGSDHNCENLPYPLNPNGSIDDVAAICSRD GRHLAMMPHADRSFLTWQWAELNSVTWNTRFDQQTVALSPWIRMFRNAFNWCNA" gene complement(<414541..>415858) /gene="Cre-lips-3" /locus_tag="CRE_20347" /db_xref="WormBase:WBGene00061741" mRNA complement(join(<414541..414641,414692..414751, 414795..414912,414957..415236,415282..415587, 415634..415744,415851..>415858)) /gene="Cre-lips-3" /locus_tag="CRE_20347" /product="CRE-LIPS-3 protein" /db_xref="WormBase:WBGene00061741" CDS complement(join(414541..414641,414692..414751, 414795..414912,414957..415236,415282..415587, 415634..415744,415851..415858)) /gene="Cre-lips-3" /locus_tag="CRE_20347" /note="contains similarity to Pfam domain PF01674 Lipase (class 2); contains similarity to Interpro domain IPR002918 (Lipase, class 2); coded for by the following C. remanei cDNAs: DR777371" /codon_start=1 /product="CRE-LIPS-3 protein" /protein_id="EFO98651.1" /db_xref="InterPro:IPR002918" /db_xref="PFAM:PF01674" /db_xref="WormBase:CRE20347" /db_xref="WormBase:WBGene00061741" /translation="MKCLLLLVTLSTFHAPSNAQKSGPPGPMSSHFVDWLIAHGYESD AFDRPDVGPNGSFGGKRRSGDPVEKEPVIFIHGSGDAALFTQQPLATGFSRSIQYFLE QNYTEAELYATTWGDTWGSGSMLDTYSTIHTCGNLIYLRRFLEAVIGYTGAKKVDIIA HSVGVPLMRKVVKGGTLIGTDGNCTLGPPLGAKVDTFLGIAGPNFGLCVCQLAQTVPA WCNALDGLYPGYTCQDQLWCGYTSGSCKQENYSNLLQKTNDDPNREGDHVYAMWSDVD EVLLNRGMVWGKPTARIPGMNGRWISDRNGHVAMKDLTELRQFEAIVHHSI" gene <418749..>425851 /gene="Cre-sel-2" /locus_tag="CRE_20245" /db_xref="WormBase:WBGene00061743" mRNA join(<418749..418803,418875..418959,419068..419284, 419947..420213,420263..420348,420408..420549, 420602..420697,420745..421094,421172..421388, 421433..421755,421801..422268,422315..424038, 424114..424322,424367..424474,424825..424939, 424984..425222,425266..425417,425459..425629, 425704..>425851) /gene="Cre-sel-2" /locus_tag="CRE_20245" /product="CRE-SEL-2 protein" /db_xref="WormBase:WBGene00061743" CDS join(418749..418803,418875..418959,419068..419284, 419947..420213,420263..420348,420408..420549, 420602..420697,420745..421094,421172..421388, 421433..421755,421801..422268,422315..424038, 424114..424322,424367..424474,424825..424939, 424984..425222,425266..425417,425459..425629, 425704..425851) /gene="Cre-sel-2" /locus_tag="CRE_20245" /note="contains similarity to Pfam domain PF06469 Domain of Unknown Function (DUF1088); contains similarity to Interpro domain IPR010508 (Protein of unknown function DUF1088)" /codon_start=1 /product="CRE-SEL-2 protein" /protein_id="EFO98577.1" /db_xref="InterPro:IPR010508" /db_xref="PFAM:PF06469" /db_xref="WormBase:CRE20245" /db_xref="WormBase:WBGene00061743" /translation="MEISETSHNESGPPTQDNGTVQIPAEDEVNDEESNMETVDLGGM DDSSAEISTRNVFKNIDDESSELPSTPTEADSNGNPEDIVVPSSVLSSAPSQDVSPNA AIESLPPLPEGKELELEDDVTSSLPRLLSKTTLIHSNEEGADETIQRLVVALHSNSPN TDRTQIVDNLFNLLVGGHFDQESKFVIEEASNVDHMLTLLSHCDCDLQNEIWSLFLAV MKKSNRNLEACTRVGLISKVLDLLPEAPPLLADLLVQIIAALVAYSINVKQTKHLLRA LKSTRDQWPPNSLKLLHVLKEMPQHDSADVFFSFPGKDQSGIILPPIKTMPYQQGWTF ATWLRMEPLNSVTFEKEQPVLYSFRTSKGIGYSCHFTGNCLVVNVEKTKGKEQSRCVR AELGARKWHHIAIAHCYSRWGRSDIKCFIDGQLAETIELSWVVTSATNWDRCSIGVSA DGTANSAFCGQMGAMYLFAEALSLQQANSLFCLGPAYQSTFKHDSETSLPEGYKKHLF DGHLHSSLVFAYCPKNCHGQLCLYTPPKTAANTYFVQIPHAVMKEVEQIYTSLQLILN LQGVEVITTHSIHKSLQSVGGIQILLPLFAQIDLPSSNDNSIDGEVCQTLLSLISLLL SSSQSSQQQLFHSKGFLIISSCLQKASPYHLSMKVLEQLIHIAKFLLRCPAGGPLLKH LFDYILFNPKLWIRARPDVQVHLYQYLASDFLANNNFSQMLRRVPTVIEMCHTLKHFY WLALPQTASDYTVEERPENFATADIVAIRSAILTFINRIIIASAGPEEEERVRDQEVH TLLNLLATVREDDNLYDVLALVTRLLAEHPAIMIPAIDKNKALGIIFNLLAAPNELIR IPALKILGFFLSRSTLKRKTESMGNQNLFSLIGERLLSHKRVLSLPTYNVLLEILVEQ MTPTFTYAAHQPAQPEWKFENPQLLKVIAHVISQCEESESIVQIKKCFLLDIINLCKD SKENRRTILQMSVWQDWLIGLAYVFHTTESQNEVSELVWEAFSILLHHALRHEYGGWR VWVDTLAIAHSKVSFERFKKKLADAKTKAERTETGGEESKMEPTPVYRAPEFAWSEVH IHLLADLLSGIEGTVGEWKTADGGISDQCNASESQVFVGNVIHVISQLADSLIMACGG LLPLLASATAPNNDMEIVDPCQQQLPISVAASFLMRFARLVDTFVLASGVSFSELEQE KNMPAGGVLRQSLRISATVTVRHILASRIQQPDTPRYETNSTKKNQCIMEFVREALEN PSPEGLDNVERLVQDSDITRIKGVVYRDMVEENRQAQFLALSVIYLVSVLMVSRYRDI LEPPSSPSPFFDTTTQKQDNQDNESLESTPENGANGKLENDGDNSSIKNGTVENENVE EETEENREEGQGDDGRIAAIKVASSGMKKDGNEYNEEELSKINQANGRRPSTLMPVQQ TAERRAYLTTKLQTALETCAPLLREMMSDFRGYLQKTLLGTHGQEIMNDTKVLETLRN RNASVIELVMLLCSQEWQTSLQKHAGLAFIELVNEGRLMAHATRDHVLRVANEADFIL NRLRAEDVGKHAQFEAESRDQLLARHEEYGRCDLLIVSGRLRDSLNAARLLEKMSAIL TDSDDSKPGSQFWKLDVWEDDSRRRKRFVPNPYGSRHDEANLPEGEKNEEPEISEQEK IRKILKGLFSQRQTTSGSLELVDESDIDKWAQEVDPTPSSRKFFHRETFLLVRQC" gene complement(<427256..>429065) /gene="Cre-mab-21" /locus_tag="CRE_20348" /db_xref="WormBase:WBGene00061744" mRNA complement(join(<427256..427431,428015..428493, 428538..428779,428825..428989,429033..>429065)) /gene="Cre-mab-21" /locus_tag="CRE_20348" /product="CRE-MAB-21 protein" /db_xref="WormBase:WBGene00061744" CDS complement(join(427256..427431,428015..428493, 428538..428779,428825..428989,429033..429065)) /gene="Cre-mab-21" /locus_tag="CRE_20348" /note="contains similarity to Pfam domain PF03281 Mab-21 protein; contains similarity to Interpro domain IPR004962 (Mab-21 protein)" /codon_start=1 /product="CRE-MAB-21 protein" /protein_id="EFO98595.1" /db_xref="InterPro:IPR004962" /db_xref="PFAM:PF03281" /db_xref="WormBase:CRE20348" /db_xref="WormBase:WBGene00061744" /translation="MLGHNQNVVYQVNTYYNEKVQHRKARVTKTVHRIGKVVQDILKE VEAQEPRFINTLSETSTGRLDGVVVHSPSEYEAVLYLNQMGVFNFVDDGTIQGCAVLK LSDGRKRSMSLWVEFITASGYLSARKIRHRFQNIVAQVLQTPQFSEYCKLLQDNTDVR VRIDDKYTVQITCAFRCNGIWPRSASHWPIAGLPWPNAALANQTKAEGFDLTSRETAI THQNNPNKQASTMEADAWAMKMHGAENMLLTGGRRKTLSILKCLRDAHMDFPGTPVTN YILKTLVLYECEKHCSEYEWEDTNIGDRLIGVLLQLVSCLQCRRCAHYFLPSLDLLRS KPVHSIEHSAQLAWHLVRKLMIDPNALQTL" gene <430214..>433056 /locus_tag="CRE_20246" /db_xref="WormBase:WBGene00082226" mRNA join(<430214..430246,430350..430467,430512..430843, 430893..431033,431088..431796,431850..432104, 432153..432292,432335..432651,432702..432813, 432865..>433056) /locus_tag="CRE_20246" /product="hypothetical protein" /db_xref="WormBase:CRE20246" /db_xref="WormBase:WBGene00082226" CDS join(430214..430246,430350..430467,430512..430843, 430893..431033,431088..431796,431850..432104, 432153..432292,432335..432651,432702..432813, 432865..433056) /locus_tag="CRE_20246" /note="contains similarity to Pfam domains PF02138 (Beige/BEACH domain), PF00400 (WD domain, G-beta repeat) (2)contains similarity to Interpro domains IPR000409 (Beige/BEACH), IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DY524882, DR779589, DY529317, DY528633" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98510.1" /db_xref="InterPro:IPR000409" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="PFAM:PF02138" /db_xref="WormBase:CRE20246" /db_xref="WormBase:WBGene00082226" /translation="MGNLIEMKSHWVLRYCEALHARWNLQEIRAIFLRRYLLQNTALE MFLASRTAIMFAFDSEETVKRVVYQLPRVGVGVKYGLPQSRKTSLMTPRQLFKHSDMC VKWQKREISNFDYLMFLNTVAGRTFNDLSQYPVFPWILTNYTSDTLDLSVASNFRDLS KPIGALSEARRKFFNDRYTSWDDDQVPAFHYGTHYSTPAFTLNWLFRLEPFASMFINL HDGKFDHPDRITHSIKDSWDRCQRDSHDVKELIPELFYLPEMFRNSSKFNLGRRADGT PVDDVILPPWAESPEHFVLMHRQALESDLVSCQLNQWIDLIFGYKQRGAEAVRATNVF YHLTYEGTVTPKMAETPGQMAAIEQQILSFGQTPSQLLAEAHPPRHSIMSMAPTMFRR HDDDLCMMMKYISNSPVVYLAANTFHQLPQPTVVGVAQNLVFSLNKWDNSYSYGASQR SALSMDPSNAEGQVSLPLTADPQLATAASTTPIARRHLGDAFDQRLTVQCSNFVTTTD SKYIFACGYPDYSFRIVDTDSGRVRQAVYGHGDVVTCIARSETSLFSDCYVVTGSMDC TVVLWHWNGTTGFIAGEYNQPGEVPSPRSILTGHEASISSLCVSAEHGLVVSGCEDGV ILIHTTSSDLLRRIRGHGMVTQLSMSRECILLALFDSKRMVTYSSTARKLNEILVDDK IECVTVTRDGEFAVTGAINGRITIWRMFPLTKLYTYQPLNSAVRSVAVVASHRFILGG LDSGAIVVFNADFNRWHYEYKHRYIQNSSATRPSQPSPSPQK" gap 433716..433725 /estimated_length=10 gene <434698..>435814 /gene="Cre-asb-1" /locus_tag="CRE_20247" /db_xref="WormBase:WBGene00061745" mRNA join(<434698..434773,434819..434881,434931..435293, 435337..435535,435613..>435814) /gene="Cre-asb-1" /locus_tag="CRE_20247" /product="CRE-ASB-1 protein" /db_xref="WormBase:WBGene00061745" CDS join(434698..434773,434819..434881,434931..435293, 435337..435535,435613..435814) /gene="Cre-asb-1" /locus_tag="CRE_20247" /note="contains similarity to Pfam domain PF05405 Mitochondrial ATP synthase B chain precursor (ATP-synt_B); contains similarity to Interpro domains IPR008688 (ATPase, F0 complex, subunit B, mitochondrial), IPR013837 (ATPase, F0 complex subunit B, mitochondrial, metazoa); coded for by the following C. remanei cDNAs: DY528894, DR778304, DY527380, DR777523" /codon_start=1 /product="CRE-ASB-1 protein" /protein_id="EFO98650.1" /db_xref="InterPro:IPR008688" /db_xref="InterPro:IPR013837" /db_xref="PFAM:PF05405" /db_xref="WormBase:CRE20247" /db_xref="WormBase:WBGene00061745" /translation="MSLSRLSSPQLYSRAFIVARGAATGHATATSDNSISFFEKISYR FKGIPLPTETEAPKSMFDACNKEWSAPELLPAVPKEFKEHPDRDLANYPYPSRPMYPP KSRLLMMPDSWFTPFQKVTGTSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWIIFYL LVSRTAGYKIDAGLYKDYQERVGFFKGLIQEDLKEAVDFRKTSAKQTDSLTALKDNMP TSLKESMQLQLEAAYRKNIQTISSEIKRRIDYLKETEETKARFERDQLLRLINESVEK QVSQKDFQEKFLQNAIQQLKGIAV" gene <436012..>436527 /gene="Cre-apc-11" /locus_tag="CRE_20248" /db_xref="WormBase:WBGene00061746" mRNA join(<436012..436113,436155..436238,436291..>436527) /gene="Cre-apc-11" /locus_tag="CRE_20248" /product="CRE-APC-11 protein" /db_xref="WormBase:WBGene00061746" CDS join(436012..436113,436155..436238,436291..436527) /gene="Cre-apc-11" /locus_tag="CRE_20248" /note="contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type); coded for by the following C. remanei cDNAs: DY524975" /codon_start=1 /product="CRE-APC-11 protein" /protein_id="EFO98470.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00097" /db_xref="WormBase:CRE20248" /db_xref="WormBase:WBGene00061746" /translation="MEQRDSEEPGSRSSEDTDDPQNMSNESDSSEPQEVSSREREPHP GVMLESNTRLNITVKKLHVCGEWKWLQGGEDTCGICRMEFESACNICKFPGDDCPLVV GTCRHAFHRHCIEKWIAAPSNQPRAQCPLCRQDWQVAD" gene complement(<438492..>438929) /locus_tag="CRE_20349" /db_xref="WormBase:WBGene00061747" mRNA complement(join(<438492..438608,438656..438780, 438824..>438929)) /locus_tag="CRE_20349" /product="hypothetical protein" /db_xref="WormBase:CRE20349" /db_xref="WormBase:WBGene00061747" CDS complement(join(438492..438608,438656..438780, 438824..438929)) /locus_tag="CRE_20349" /note="contains similarity to Pfam domain PF01133 Enhancer of rudimentary; contains similarity to Interpro domain IPR000781 (Enhancer of rudimentary); coded for by the following C. remanei cDNAs: DY527701" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98463.1" /db_xref="InterPro:IPR000781" /db_xref="PFAM:PF01133" /db_xref="WormBase:CRE20349" /db_xref="WormBase:WBGene00061747" /translation="MSSSTSSHTVLLIQASPRLDSRTWADYESLTDALDAICKMFEEF LSKKSAGPVTYDVSQVYEFLDKLSDISIMIFNRETGQYIGRTRAWIKQQVYEMMRGRC QHPEGGEKVIVGY" gene complement(<439326..>441975) /locus_tag="CRE_20350" /db_xref="WormBase:WBGene00061748" mRNA complement(join(<439326..439445,440487..440578, 440634..441169,441219..441320,441365..441486, 441535..>441975)) /locus_tag="CRE_20350" /product="hypothetical protein" /db_xref="WormBase:CRE20350" /db_xref="WormBase:WBGene00061748" CDS complement(join(439326..439445,440487..440578, 440634..441169,441219..441320,441365..441486, 441535..441975)) /locus_tag="CRE_20350" /note="contains similarity to Pfam domain PF02463 RecF/RecN/SMC N terminal domain; contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR003395 (RecF/RecN/SMC protein, N-terminal); coded for by the following C. remanei cDNAs: DY529334, DT933689" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98516.1" /db_xref="InterPro:IPR003395" /db_xref="InterPro:IPR003439" /db_xref="PFAM:PF02463" /db_xref="WormBase:CRE20350" /db_xref="WormBase:WBGene00061748" /translation="MQFDDELPVDENQSPEENEKQKKHMACVLSDRAYAMEFELRQKV LKNTESYEDVDGDKMVQIQYLTDAEVDEISDRDAEELQFKLKTCEQQLETMKSKVDLS CIDAYVVKVNQFNEQVIKFAMVHEDHRKHNEKLQAIKKDRLEEFHSAFEFIGKHLVAV YKMLTDGGDAKLEYIDKDDPFKEGISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFAL HMFRPTPFYVMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFELANRLVGI YKVDGCTQNVAIDPQKVCEMAKGISDSLGQITCTLPEEITQQFSETMSRQSKEITAQE KQYPNFPSSSEISKAEKIVSVEGRVRKQLNHTASDTTSGSRPQSKAATQANATERQTF NRPESRANQIKIPNPRLVERAASQTSRTPRKERNTEADETTPPAKRSNSTTSKSPAKP VAGRSTKKKKSMSDDDEDSN" gap 440198..440368 /estimated_length=171 gene complement(<442109..>446466) /gene="Cre-smc-4" /locus_tag="CRE_20351" /db_xref="WormBase:WBGene00061749" mRNA complement(join(<442109..442659,442707..442914, 442965..443402,443848..444105,444365..445109, 445156..445448,445492..445665,445712..446026, 446070..446135,446296..>446466)) /gene="Cre-smc-4" /locus_tag="CRE_20351" /product="CRE-SMC-4 protein" /db_xref="WormBase:WBGene00061749" CDS complement(join(442109..442659,442707..442914, 442965..443402,443848..444105,444365..445109, 445156..445448,445492..445665,445712..446026, 446070..446135,446296..446466)) /gene="Cre-smc-4" /locus_tag="CRE_20351" /note="contains similarity to Pfam domains PF06470 (SMC proteins Flexible Hinge Domain), PF02463 (RecF/RecN/SMC N terminal domain); contains similarity to Interpro domains IPR003395 (RecF/RecN/SMC protein, N-terminal), IPR010935 (SMCs flexible hinge)" /codon_start=1 /product="CRE-SMC-4 protein" /protein_id="EFO98666.1" /db_xref="InterPro:IPR003395" /db_xref="InterPro:IPR010935" /db_xref="PFAM:PF02463" /db_xref="PFAM:PF06470" /db_xref="WormBase:CRE20351" /db_xref="WormBase:WBGene00061749" /translation="MPPKKSTGPPPQSDESGSDFEEEPARKPQKKPSKSSKPSKFSKQ EKEKELDPEEALKRAADTIFDGSEGEDDDSDLFALEIPPRPDFLVRPNKKDRLMILNV EVNNFKSYYGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFGFRASKIRSAKVANL IHKSAGREPDSCTVTIHFQRIVDVPGHYEVVKDSLFDISRTAYRNSSSSYAINGRPAS KNEVEARLRLVDIDIEHNRFLILQGEVEQIAMMKPVKTTKSETGMVEYLEDIIGSNRL ERFVKKFQRRVNRLNCDLSQQRIARDHARNSKIAMEGQVRTAIEFLNKENEAKTIEMK LNQRRKKKYKDRAAPKQAELDKQKEEMKEIAAKLDENKSESKSAEDEEKKLSKDRLKI EKEIDQLTKEIDDLSAEETRRRETIKRYETDISKTEAEKDKEQKKRATFVSVPEKAEK KLAKWKEEVEQLIETEDTANAAADNNLEEFEKRAEKLKEEQKKAQEAWSKSNTAFISA RSEATVARNEYEDMNKMANSGSKKLDQLKERLKTTEEKFIKEKEEIEKLRPEVDSWNE KLRNLKTSLPTVREEAKTTNLALNQCQERLDVLRQQNSSGSGGSHLVKMLMKEKQEGR IPSFIGRLGDLGLIDKKYEGAICTNYGAILNNLITGTSDDSKKIMNFLYKNKLPRTTI QSLDRVPQVRAEDMAPVPKDRYPGPRLFDLIECEPEVRHIYYRTVRNAVVAESTTEAL KMNKMSSCKNVNIVTLQGAMVQSSGSITGGGQTLKGFILTDKNKKPKEVTAEDRRAEK ELTVEVAQLQTKSDELREQEHKLDAQLIEARRKVHELEQRLSIVTATVDSEGENIKSL RKAVENQEKEASKVKVDAKELEAKKKLAEEFEKKQDELSEEAEITRKRQAEVQSKLDG IFKELVQCHRDEAKDASTKRAKLEKDMAKETANVTNSGRNIAKCDENIVRMEKEIEKK KQMCIDLEEKAIDGEGLEGKKSALEEVEKKKTDVETQYKDIMKKQSELSDAETKLEEE LRKCNEVIMELKEKMNADTMKVKEIQKKVGHVGLVYILSNDI" gene <446864..>448256 /locus_tag="CRE_20249" /db_xref="WormBase:WBGene00061750" mRNA join(<446864..446940,446985..447053,447933..448020, 448140..>448256) /locus_tag="CRE_20249" /product="hypothetical protein" /db_xref="WormBase:CRE20249" /db_xref="WormBase:WBGene00061750" CDS join(446864..446940,446985..447053,447933..448020, 448140..448256) /locus_tag="CRE_20249" /note="contains similarity to Pfam domain PF03091 CutA1 divalent ion tolerance protein; contains similarity to Interpro domain IPR004323 (Divalent ion tolerance protein, CutA1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98584.1" /db_xref="InterPro:IPR004323" /db_xref="PFAM:PF03091" /db_xref="WormBase:CRE20249" /db_xref="WormBase:WBGene00061750" /translation="MTTPAVKLILVYVTAPSRDVAINMARITVAESLVACANVIPGVT SVCTGYQWQGKIEEDQEHVVVMKTVDSKAEELSQRVRSLHPAVTPCFVTLPIEKATAD FAEWIIKSTHSHSI" gene complement(<448423..>450384) /locus_tag="CRE_20352" /db_xref="WormBase:WBGene00061751" mRNA complement(join(<448423..448530,448747..448836, 448965..449087,449137..449262,449304..449439, 449482..449633,449682..449878,449924..450023, 450235..>450384)) /locus_tag="CRE_20352" /product="hypothetical protein" /db_xref="WormBase:CRE20352" /db_xref="WormBase:WBGene00061751" CDS complement(join(448423..448530,448747..448836, 448965..449087,449137..449262,449304..449439, 449482..449633,449682..449878,449924..450023, 450235..450384)) /locus_tag="CRE_20352" /note="coded for by the following C. remanei cDNAs: DR776431, DT934219" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98549.1" /db_xref="WormBase:CRE20352" /db_xref="WormBase:WBGene00061751" /translation="MQGNYMNVPPGQRPLMKRKPAQVQSVVSCSASYENQRVCIPAEV VELQKTEKITEIQRSNKAWSLHSIIENIHFLDYKCTLETDEKFVFTPVTQQHVPLTTQ ISYSARNQDDTPGIVSLSQNLSNLIASSTTAADANTVIHGTQNRTPVNLISYAARMFK KPMWTWLGDEAREEKRSRVVEFFKSAQDANSDISNVSIRKEAKRLARALWESSIRNFP QVLYLLRLLRARRPNGFELLNFESEIESLIPEKWRVVDPNISFDQLITESSKLILLNM LMCSNQSDHQIVEVSILIDYIGFYEISDKEVSIIYNYLYSTAEGKTSKKIHKYLCQFH KGWENRYNEAAGMKEIERICDENKMFSLEDGAYKAKGHSYKIVLPMYFMPCLHQLRQQ L" gene complement(<451380..>453531) /locus_tag="CRE_20353" /db_xref="WormBase:WBGene00061752" mRNA complement(join(<451380..451590,451642..451816, 451858..451968,452218..452329,452376..452464, 452520..452577,452621..453142,453189..453297, 453346..453446,453496..>453531)) /locus_tag="CRE_20353" /product="hypothetical protein" /db_xref="WormBase:CRE20353" /db_xref="WormBase:WBGene00061752" CDS complement(join(451380..451590,451642..451816, 451858..451968,452218..452329,452376..452464, 452520..452577,452621..453142,453189..453297, 453346..453446,453496..453531)) /locus_tag="CRE_20353" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8NRP5" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98471.1" /db_xref="WormBase:CRE20353" /db_xref="WormBase:WBGene00061752" /translation="MTNMKEYEEIIENWRNEYISNRNSKKGWEILENLAKLQMESDQG METDDNTETADFDDFSTSKLISLIIGDIPAKDLLVDHQVVLLEFIPTSHPNVLRHVVR TIREKEGSIAFLKSSSLAVGIAIARRVTDNVAGEEIRRVLAHLVENSYICDDLKSQLN DLNGRNCSASRSRIYSVNSMQGRIIYLKVLLQIATERARISSDSSCIHWLYEEILKSV LDASDVLAQLDALDTFVDIALNGKQNAETLFKLNIVKQIYDLMEHSKESPDSGEIYLY GTRFLCYMARSYPQVLKSFPDFVRRLLLEIRMFDQLSVTGRLGAFDHFASLCFSMEAK QTLEEMFKDSKELDNTLGSAGAACTMGTMEMKCRTLQAVTLVFENANDKLAGSWYERL GGKALTHISVATIRKPFPELKSCVYDFWQQLFEYPTVVQQFIMFQGFADWALDEKSEN GPEHELRKRQIIHRIIKLSENNATAEVINADPVFLDRLKKYLQPAAAPAPRVEEMAL" gene complement(<453732..>456577) /locus_tag="CRE_20354" /db_xref="WormBase:WBGene00061753" mRNA complement(join(<453732..454020,454069..454260, 454311..454458,454511..454604,454651..454749, 454792..454898,454946..455118,455206..455393, 455442..455648,455696..455784,455837..455942, 455989..456080,456128..456482,456533..>456577)) /locus_tag="CRE_20354" /product="hypothetical protein" /db_xref="WormBase:CRE20354" /db_xref="WormBase:WBGene00061753" CDS complement(join(453732..454020,454069..454260, 454311..454458,454511..454604,454651..454749, 454792..454898,454946..455118,455206..455393, 455442..455648,455696..455784,455837..455942, 455989..456080,456128..456482,456533..456577)) /locus_tag="CRE_20354" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98642.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE20354" /db_xref="WormBase:WBGene00061753" /translation="MSSVSNASQTGSKKKLSFIVRDEQEPSHRSAVSAMQYDAQHGRL FTGGSDTIIRTWSVPQHKVCFRIFFADFPKNGFDVQYFFLSRSFYLQDAFSARGGVRS PGKNSPVQYQGSLEQHTDWVNDMILCGNGKILISASNDTTVKAWSIERDNKHGYLDCF RSHKDYVSCLAYAPNVEKVVSASFDRNIFVYDINANFKTVNNLLGCKDSIYSLATTPN LSLILGSGTEKLIRIFDPRTNEKPMKMRGHTDNVRALVVNDDGTRALSAGSDATIRLW DIGSQRCISTCIAHQEGVWTLQVDSSFSTVYSAGKDRWVLKTPVNELPKSQLLFQEEA PVKKLLLSEKENPSSIWVGTWKSHIKRWSLRSSAQLSIGGDDEGPTSSSHYSTSTPAP SSPPVSVSLRVRDQKPQQTTPELVIPGAASINKHKTLNDKRHVLTRDTDENVALYDVL AAKKVKDYGKRSFDEVFDENSKTIFIPSWFVVDSKSGMLQITLDELDVFSSWLSTKDA GFDDNDRETKVNYGGMMLRSLFERWPPCKAACMEAGEMDEVQKATSHFFSLPEHTPFI VCEGNGRPLFRLLVGDAGKEFEANELSQVVPPWVIDAIERSQLPKFNKMPFYLLPHPS TNPKQPKKDRLSATEMLQVKKVMEHVYDKVLSNSDGLVCNFFFKFCYFDLFSASSIPI SQIHTKIEMYCNEQKLEPEMDLRTVKHFFWKQSGELLLYYKPIKN" gene <457136..>464569 /gene="Cre-sel-5" /locus_tag="CRE_20250" /db_xref="WormBase:WBGene00061754" mRNA join(<457136..457244,457288..457344,457494..457615, 457683..457768,457806..458167,458211..458363, 458409..458518,458573..458869,459648..459964, 460012..460235,460306..460431,460911..461011, 461060..461212,461289..461402,463518..463832, 463878..463962,464008..464430,464478..>464569) /gene="Cre-sel-5" /locus_tag="CRE_20250" /product="CRE-SEL-5 protein" /db_xref="WormBase:WBGene00061754" CDS join(457136..457244,457288..457344,457494..457615, 457683..457768,457806..458167,458211..458363, 458409..458518,458573..458869,459648..459964, 460012..460235,460306..460431,460911..461011, 461060..461212,461289..461402,463518..463832, 463878..463962,464008..464430,464478..464569) /gene="Cre-sel-5" /locus_tag="CRE_20250" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related); coded for by the following C. remanei cDNAs: DR408492" /codon_start=1 /product="CRE-SEL-5 protein" /protein_id="EFO98533.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE20250" /db_xref="WormBase:WBGene00061754" /translation="MPLGLFSSGRAQVLSDEKPAGSKKKDPKQLSENKCKGVSLKLDH TRVTIEKQIAEGGFAIVYIASDRKNNKFALKRQFTKENQKQLDACCREHSFLKQCVGH KNIVEFVDSYVNCLGNGIWECMLNCRNSYFSGNVLQLMNERISQNQYLTNEEILSIFS DLCEAVSFIHNRPQPIIHRDLKVENMLISSHKPPNYVLCDFGSATTQVLSIDKFGVEY VKSEVERNTTMCYRSPEMVDLYSGQELGLKGDIWALGVLLYRLCYFCVPFEESPLAIQ SVNYQFPNAPNIPDETKVLIYMILDIDVNRRPSIYQTASLAFEAYGKPLPTEIQNKKL TDTAPRLKSCIQLMNDGTKPRNKREASPRTAEQPPITYLNSSVSRNAHNVTSAANVVP SVIGSGETSVAPRLRPKATNTVPNVPSISPVPPLGLPHLKFPSKLESDETNEGQVQKG ASSELHRKSFSGDNKLEAEQQESSGPLSCPLMKPSDLGFTDLDKPALPRDRAQTDGKR RMPHEADIIFHQQHRRNVSDTSQISRSAFKPYSSQQTTSKATSQVVRSVEDMSNHSSN NGVGEWNPFLAAPFSNSSICRKDFAETGFMMDDSHFGMVFDEIRRREVPTELESDTSS IDSRDPFGAAPFDQLTVSTSSSAQPVSLPPAAEEDDERQLISDTDEEDREEIVAGIIE VKKETQTEEDSEIDEQRMNDRRRYSYENIDGVGDDASSDSRGKTDRDDSEEEDDDSRR GGDTSHDEDSQNTVGSEDGEGGSRPLLEDDGLEDDDDHELTSPFSSSSANFPPLFIGT SSPHTQNIITNPFLRDELTPKMISPLPMSTALGRNPSADDEWDLGDRWTDRRDTVFER PNVQQQNVFAPATLPRQVTPLVCRLKPDLPTAAPVSIIPSMSNTSFPEAIRVSEDSLP REPVIGTLISVGAPTEPPSPKKIEKILNLETSEVSTKETLITTVKKEKLEKLLKKEKK KEKKEGKKDKLKLEEYREKGSSEPETDGSEAEIWTADGSTTLSKKKKKSAFGLRSSHP SIVVNELQFASPVPPVAKKLSKEKKSSLTGKNASFVNTSFQPEDHDDPSEM" gap 462287..462411 /estimated_length=125 gene complement(<465484..>467069) /locus_tag="CRE_20355" /db_xref="WormBase:WBGene00061757" mRNA complement(join(<465484..465555,465605..465793, 465840..465983,466090..466302,466349..466453, 466501..466887,466944..>467069)) /locus_tag="CRE_20355" /product="hypothetical protein" /db_xref="WormBase:CRE20355" /db_xref="WormBase:WBGene00061757" CDS complement(join(465484..465555,465605..465793, 465840..465983,466090..466302,466349..466453, 466501..466887,466944..467069)) /locus_tag="CRE_20355" /note="contains similarity to Pfam domain PF00180 Isocitrate/isopropylmalate dehydrogenase; contains similarity to Interpro domain IPR001804 (Isocitrate/isopropylmalate dehydrogenase); coded for by the following C. remanei cDNAs: DY526313" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98492.1" /db_xref="InterPro:IPR001804" /db_xref="PFAM:PF00180" /db_xref="WormBase:CRE20355" /db_xref="WormBase:WBGene00061757" /translation="MSTNVLGQTLRSSKNVVQKAFVATAPSSDMLRFRSPVLQTNTTK LARYGGRHNVAVLPGDGIGPEMIDHVERILTAVQAPIDFEEVNLTSKEDASEDLAEAI TAIKRNGVALKVFFLLKLFLNRKFRETSKRNSITRVLSLVTWSFVVSSISMPMFFTVL QFRLFRADIQYGIDMVIIRENTEGEYSGNEHEAVNAPHPRVVESLKVVTREKSEQITR FAFQFAKKYGRKKVTAVHKANIQKLGDGLFLRVATDIAKNEYPEIEFNAMIVDNASMQ LVSRPQQFDVMLMPNLYGNIISNIACGLVGGPGLVSGMNIGDDYAVFETGTRNTGTTL AGKDLANPTAFIRAAVDMLRFLGLQMHADIISDSLFRTLVDKRIHTADIGGSAKSSEL VQSVIEFIEKELEDRNYRV" gene <467731..>469476 /locus_tag="CRE_20251" /db_xref="WormBase:WBGene00061758" mRNA join(<467731..467832,467888..468022,468072..468194, 468250..468476,468524..468699,468760..468915, 468962..469174,469220..469325,469371..>469476) /locus_tag="CRE_20251" /product="hypothetical protein" /db_xref="WormBase:CRE20251" /db_xref="WormBase:WBGene00061758" CDS join(467731..467832,467888..468022,468072..468194, 468250..468476,468524..468699,468760..468915, 468962..469174,469220..469325,469371..469476) /locus_tag="CRE_20251" /note="contains similarity to Pfam domain PF05292 Malonyl-CoA decarboxylase (MCD); contains similarity to Interpro domain IPR007956 (Malonyl-CoA decarboxylase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98569.1" /db_xref="InterPro:IPR007956" /db_xref="PFAM:PF05292" /db_xref="WormBase:CRE20251" /db_xref="WormBase:WBGene00061758" /translation="MIRQYFCFQSVRSASTLLSSLDGLSNRTSGDKLLTYGEKFSKLY GSSAPETRKSIFVDLVTNYGVNKEALNHAISLYSKNDQMYPEVRTAATAIYVNLIKSV GNLPGGVSQVCEMRANILALLKRETDKTITSYLRHVEIATREVLTSWFCLGNLKLERL TWSSPGDVLQKVAEYEAVHPVRGLSDFRKRLGPLRRCFYFSHEALPRNPLVMVHVALV SEIADSVQEITKRGEPIGREEDQTTAIYYSITSTQPGLSGIDLGNMLIKKVATQLQKD VPSIKTHSTLSPIPGFRPWLIRNLKGNAEYPSVMNEKVVKWMSEVSNEMMNESEATET LLKVISNEKTKKEQLSAIQHILMYACAHYLCRAKRNGMALNSVANFHIRNGAELYRLN WNGDTSHRGINNSFGIMVNYRYDLEKVHENCAAYTERKEMAINENVMNFFKDDDN" gene complement(<470007..>472239) /gene="Cre-pan-1" /locus_tag="CRE_20356" /db_xref="WormBase:WBGene00061759" mRNA complement(join(<470007..470162,470278..470543, 470588..471133,471184..471404,471452..471795, 471850..471973,472021..472076,472120..>472239)) /gene="Cre-pan-1" /locus_tag="CRE_20356" /product="CRE-PAN-1 protein" /db_xref="WormBase:WBGene00061759" CDS complement(join(470007..470162,470278..470543, 470588..471133,471184..471404,471452..471795, 471850..471973,472021..472076,472120..472239)) /gene="Cre-pan-1" /locus_tag="CRE_20356" /note="contains similarity to Pfam domain PF00560 Leucine Rich Repeat; contains similarity to Interpro domain IPR001611 (Leucine-rich repeat); coded for by the following C. remanei cDNAs: DR777731" /codon_start=1 /product="CRE-PAN-1 protein" /protein_id="EFO98582.1" /db_xref="InterPro:IPR001611" /db_xref="PFAM:PF00560" /db_xref="WormBase:CRE20356" /db_xref="WormBase:WBGene00061759" /translation="MRSLLNFVLLLLIRIATSEEKTSCIEIEKGFTDGQKTHEKQICI CADGGIFSSSGFSIECESAPISTISSNLSTLNGTSVGRLTIRDAVVNTLPLDVFDNVR AKHLKFEGCGQLTLQPKSFIALGDSLEILALRDNEIKRLEKGLFAGLTNVKTLDLAMN KIEEIDFGVFEDLERVEDILLNGNVIPELKAGLFNGLKNMKKLSIQSCGLEKIEKGAF KGLENLEQLILSHNNIQNIDWTIFSNLKNLRVLDLGSNFISNVELKGFPKLEKLVLNN NTIDSMKAIKLKELPSLVIALFDRNKIQSINDMDMFGLTRSDRIETMSLAWNNLSQIS SKAFQHTPNLITLLLQHNHIEDLSTSSFPSFSIPHSHLFPFSDTSTSIRIPFLTILKK LATLQLSANNLSIIRADELPKSLINLALDHNVITKIEARALEGMAIKKLYLHSNRLSY LYRGTFDSFAPSSVEAIDVSSNTWQCICNDPREWLPRWISEAEESDVSEGPIGCLAIP RCGIEMDPNKAEKEEVVRSGWITVAATILTVITIIIMVIIAMLYFKDYNYQFTLRGRR SDSDLHKLIENDPLNIQSDSILVVPAMPKRNTGPKKTVRFESFQ" gene complement(<475975..>481787) /locus_tag="CRE_20357" /db_xref="WormBase:WBGene00061760" mRNA complement(join(<475975..476084,476131..476304, 476351..476654,476700..477191,477236..477404, 477452..477574,477642..477904,477957..478484, 480605..480717,481371..481548,481671..>481787)) /locus_tag="CRE_20357" /product="hypothetical protein" /db_xref="WormBase:CRE20357" /db_xref="WormBase:WBGene00061760" CDS complement(join(475975..476084,476131..476304, 476351..476654,476700..477191,477236..477404, 477452..477574,477642..477904,477957..478484, 480605..480717,481371..481548,481671..481787)) /locus_tag="CRE_20357" /note="contains similarity to Pfam domain PF00013 KH domain; contains similarity to Interpro domains IPR004087 (K Homology), IPR004088 (K Homology, type 1); coded for by the following C. remanei cDNAs: DT937083, DR778321" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98562.1" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="PFAM:PF00013" /db_xref="WormBase:CRE20357" /db_xref="WormBase:WBGene00061760" /translation="MDYFNAGGGGSTGNGNTDPYAVIPQQFGNGGQQPQQQTVYSDYQ HEGVAEYDAYQQQQQQQPQYRAAQTSQQSPSVYFQNQMNAAPGSYFPIHSASEHDFLG PQQPPTGAAASSGSTAAPYQARSGSNKEFMIQHQQRRGNQSGQQQNQQSQQNSQQQQN QTGRQQNQQQMQQQTNQSSHYMHQQLQAAAQQQQAQQMHQRLHGVPINPQQFMVPPPS MMQPQQMHQQQQVHQMQQMQLQQQQQMVQHQSQQVNNILVQSEQIKTFKGYHPHQQNQ PHAGGHQHHNQNQNQHNLNHPGQHSIPQNAMLPRVVIRDWPIRCVVEGKYQSVIIGLH GSTIREIAQFTRCRVEFINLSKKERSVLGHNERILTIHGHADQASKAISRVLEVIQSE ALKDDVNVGADIVLRLRAHNQLCGRLIGKAGSSIKEIMQKTGTNITVTKFIEPPGGLS SVRPEEMLLILERTIMVRGPSIEAVVQAESLISAKLKKCYESDAQNRASPVMPIMMPQ MPQQGVSPSSAVQGPHIIPTPVGLVQVQHFPRSQHHLQGNANNSFLQPGVIQIAPGIS NLRQVRMWVPDSMIGALIGAKGKNIKMIIRETGAAVKIEGPEEKAQREAEEEEESKKR SVETESDERDGAASGDQPQEFLEDNGTVTSSDAIEGKPKPVSERMVTISGDDFQLLKA QSYVFSKIAETSAALPATSDNMERGHLLKIRTEVSVPTRIIGRIIGKGGQNVRELQRI TGAVVKIPEEERNGGEVHKHEDGIEEEVTMIRTFGNMYSTHNVQFRLAHLVGEYYRSG EHRQRQSDRKTARPQSAAQEKEGTGLDKMDLLGKVPPLSNNSNRASPKSGSSTKSKSP " gene complement(<484592..>486366) /locus_tag="CRE_20358" /db_xref="WormBase:WBGene00061761" mRNA complement(join(<484592..484757,484812..484975, 485069..485174,485227..485382,485445..485527, 485577..485718,485995..486107,486156..486227, 486274..>486366)) /locus_tag="CRE_20358" /product="hypothetical protein" /db_xref="WormBase:CRE20358" /db_xref="WormBase:WBGene00061761" CDS complement(join(484592..484757,484812..484975, 485069..485174,485227..485382,485445..485527, 485577..485718,485995..486107,486156..486227, 486274..486366)) /locus_tag="CRE_20358" /note="contains similarity to Interpro domains IPR011993 (Pleckstrin homology-type), IPR006020 (Phosphotyrosine interaction region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98522.1" /db_xref="InterPro:IPR006020" /db_xref="InterPro:IPR011993" /db_xref="WormBase:CRE20358" /db_xref="WormBase:WBGene00061761" /translation="MSWFFQSKIAKSHFYVWYLGSKEADGVRGSAVVLPVMRQLLKES FKKTPSKATVQISSKGLKLIQSVPAMSRSGKVKMQLVKFQIAANCITYSITGKPPFDD VVGVVMLVLNPEMQSPMHVHCYRCDSAETAQIMLANLQLLLSRPDVQRSINDLEHRLF LSGLLVPRNNNNNSESSFNPNRPQRSCSQSRSVSRSTAGFDERSSPLEKGKISRTDDF DIPPRRQAPTISRRVVDELKNRIIGESRLMNLGRSRESSLTRYESEKRASLSELPIET DSSRYRMFGDTMLRDTKNKSRSLDDLAADPLVSTNLRGGVAPPSPPRRFPRSEYVADP FGHNSYERTNTLEGFWKQKMRRSSSIKLDF" gene complement(<487936..>488779) /locus_tag="CRE_20359" /db_xref="WormBase:WBGene00061762" mRNA complement(join(<487936..488002,488270..488451, 488497..488592,488642..>488779)) /locus_tag="CRE_20359" /product="hypothetical protein" /db_xref="WormBase:CRE20359" /db_xref="WormBase:WBGene00061762" CDS complement(join(487936..488002,488270..488451, 488497..488592,488642..488779)) /locus_tag="CRE_20359" /note="contains similarity to Pfam domain PF09360 Zinc finger CDGSH type; contains similarity to Interpro domain IPR006622 (Iron sulphur domain-containing, CDGSH-type); coded for by the following C. remanei cDNAs: DR775858, DT936435" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98648.1" /db_xref="InterPro:IPR006622" /db_xref="PFAM:PF09360" /db_xref="WormBase:CRE20359" /db_xref="WormBase:WBGene00061762" /translation="MRLSQITKVCVSFVKNSQKTGFGPNRLHRKGTHFVGTEPPALKY HLLQDKKPSEEYGLQGTNHELPGTGKVHSKLPTKVHMKKDKVYAWCSCGYSGSQPLCD GSHNSIRIPDLKLKPVRFIPDKDMTVWLCNCKQTKNRPFCDGSHKLVADEDKKAGLFD " gene <489327..>490737 /locus_tag="CRE_20252" /db_xref="WormBase:WBGene00061763" mRNA join(<489327..489416,489488..489568,489616..489746, 489796..490003,490561..>490737) /locus_tag="CRE_20252" /product="hypothetical protein" /db_xref="WormBase:CRE20252" /db_xref="WormBase:WBGene00061763" CDS join(489327..489416,489488..489568,489616..489746, 489796..490003,490561..490737) /locus_tag="CRE_20252" /note="contains similarity to Brugia malayi UTP--ammonia ligase, putative.; TR:A8PJE5; coded for by the following C. remanei cDNAs: DY526055" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98462.1" /db_xref="WormBase:CRE20252" /db_xref="WormBase:WBGene00061763" /translation="MSSNLIRFVGNHDIASEGKFLFEILSQLRNFGVGRLVTKNEWAR KWPNNPSYMKILRAEPGMDRWLFEGKIYAEWVFRGKNLGVYEFSKDLNRSDWQLVHKH QEKSYTSCSTPMQELVLPDSFPLPPLQVHLSQKSARKNGMDEKSVSRRAPLLLSIDPE FQHLKPFIKQEAPEANSSSIYEEIDKNTLLDLYGNELPVKVEAWNVGPAVFQPRFNAT TMRVKEQPTK" gene <491542..>493594 /gene="Cre-ugt-62" /locus_tag="CRE_20253" /db_xref="WormBase:WBGene00061764" mRNA join(<491542..491631,491786..492420,492471..492564, 492612..492722,492768..493046,493097..493263, 493309..>493594) /gene="Cre-ugt-62" /locus_tag="CRE_20253" /product="CRE-UGT-62 protein" /db_xref="WormBase:WBGene00061764" CDS join(491542..491631,491786..492420,492471..492564, 492612..492722,492768..493046,493097..493263, 493309..493594) /gene="Cre-ugt-62" /locus_tag="CRE_20253" /note="contains similarity to Pfam domain PF00201 UDP-glucoronosyl and UDP-glucosyl transferase; contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /codon_start=1 /product="CRE-UGT-62 protein" /protein_id="EFO98564.1" /db_xref="InterPro:IPR002213" /db_xref="PFAM:PF00201" /db_xref="WormBase:CRE20253" /db_xref="WormBase:WBGene00061764" /translation="MKVFSLLLLLLGAVSSYKYVVFVPNMANSQTQFCARVAEVLANG GHDVTMLFINHLSDFKTDVKIPKGVKCEFYFYRIPIRSSRGYFYWFLSAYQLDAFVEG ITKQQIEKEQAAMIFKDTGLRDMPSMMAMFGRFGKMLQDGCRSMIRNKEFMKWLENEK FDVAYAYIYSTCPIGLIHTAKIPSWVWLNSGPLMDYVAQTVGVPLIPSYVPPVMMESH DEMGFFFRTKSLIGHVLMGLLHRKMSSNAETEIFREELKDPNFPHTMDIGAKCPLIIV NSNELYDLPRPTLAKVVNIGGLGVGFDSAKPLTGDFKKISETGKGLIVFSFGSVAAAH EMPLEWKNSILDAFSSLPDYQFVMRYVADDLNDRLPKNVHLFKWLPQKDLLLHNKTKA FITHGGYNSMQEAISAGVPLVTIALFGDQPKNAQVARKHGFAVNIQKGTLSKETIVEA LKEVIENDSYKQKVSRLSAMVRAQPMKPAERLLRWSEFLAEFKQLDNLEPAGQKLNFL QYHSLDVIVFLFALISLVFYIFYRILKALIRCCCCRKSLEKKKSE" gene <493875..>495674 /locus_tag="CRE_20254" /db_xref="WormBase:WBGene00061765" mRNA join(<493875..494171,494211..494413,494465..494569, 494615..495178,495224..>495674) /locus_tag="CRE_20254" /product="hypothetical protein" /db_xref="WormBase:CRE20254" /db_xref="WormBase:WBGene00061765" CDS join(493875..494171,494211..494413,494465..494569, 494615..495178,495224..495674) /locus_tag="CRE_20254" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98548.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE20254" /db_xref="WormBase:WBGene00061765" /translation="MCPCLLVDKLKNAFGKKKKGKSKESNRSDDSATSPVEPIEKKKE KSKKSKKSKRSENSKGKSKKARSNMKSPDVPSSDPNSLSSRASKPDLVINHPGVELLG QVIHNKPEPKNYIRDILKVERPDLMGSEGILDDGEIKTLDDYLLKGGEMRDGVSLTLG EIVDCDSSARVGKGEDVTIVLLYANGRFGSVYLVHRQADSEQQRAGMSNAMALKTSRR LAATVRMQHEVKTLLGLFNKNSAASKAKIPLPTHITPIFFHGTSCGTPYFIMPMMDAN LEKIKQDIGQRFPWVDAFYIGQEALIGIKQCHEHSIIHRDIKPTNLLLSIQNNKNWWL CDFGDSCSTGEVKILSPPDALTLPYLSRTAHQSLQKPTKATISMDIESWLYLFIDLFI VLPWKNKVEEAETLEAKHAFWTSTTQFIEKNTSKVPPQLLPIIQIVGNSSIDKPYAQL TTLLREGFNQNNKNPPWKPFWIEKRKKTAPPPKTPANDKKENDKKSSTVSASAGTTQT SENPSKNEKTSGKPNEAKSKTKSVSKSVSKG" gene complement(<496187..>511472) /gene="Cre-cdh-4" /locus_tag="CRE_20360" /db_xref="WormBase:WBGene00061766" mRNA complement(join(<496187..496484,496531..497373, 497418..497684,497735..498056,498107..500122, 500172..501852,501879..502278,502350..504329, 504375..505202,505250..506161,506229..507655, 508547..508651,508701..508886,509262..509375, 509429..510202,510300..510530,510580..510831, 510876..511034,511086..511190,511233..>511472)) /gene="Cre-cdh-4" /locus_tag="CRE_20360" /product="CRE-CDH-4 protein" /db_xref="WormBase:WBGene00061766" CDS complement(join(496187..496484,496531..497373, 497418..497684,497735..498056,498107..500122, 500172..501852,501879..502278,502350..504329, 504375..505202,505250..506161,506229..507655, 508547..508651,508701..508886,509262..509375, 509429..510202,510300..510530,510580..510831, 510876..511034,511086..511190,511233..511472)) /gene="Cre-cdh-4" /locus_tag="CRE_20360" /note="contains similarity to Pfam domains PF00008 (EGF-like domain) (3), PF02210 (Laminin G domain), PF00028 (Cadherin domain) (25)contains similarity to Interpro domains IPR000742 (EGF-like, type 3), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR001791 (Laminin G), IPR006209 (EGF-like), IPR006210 (EGF), IPR001881 (EGF-like calcium-binding), IPR001623 (Heat shock protein DnaJ, N-terminal), IPR013032 (EGF-like region, conserved site), IPR002126 (Cadherin), IPR012680 (Laminin G, subdomain 2); coded for by the following C. remanei cDNAs: DY526447, DT933660, DT936474, DY527735" /codon_start=1 /product="CRE-CDH-4 protein" /protein_id="EFO98508.1" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR001791" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002126" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR012680" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013320" /db_xref="PFAM:PF00008" /db_xref="PFAM:PF00028" /db_xref="PFAM:PF02210" /db_xref="WormBase:CRE20360" /db_xref="WormBase:WBGene00061766" /translation="MKKHRVFYLFLLIFCKSVNLVTTSSSSTEQIFEFTAPLYNLSVE ENSIGSKYARSENSTKIGVPLPEKDANCKFRVAEIVGEKSSLFKAHSRQVGDFVFLRI RYKGDNPLNRELKDFYDILVKATCKRRDLSNLETTARIHLRVIDRNDASPVFLIDEQG YEAEIDDDTEPFSTVLRVEASDADIGINSAIYFSLVNRSHDFIVEPVTGWIRTLRHVK PGKYSLKVKSEDRASRLYYFDENEVQPSWTADVLITVRETKLKQTKITVDRRKISPNE LKTRQLAAIITLKDAPKDALVGLKGNEKEHLFEIEMEEKTNLVIQEVRWMLYAKNGTK VPKNTNVTFTVGEDYVRKSGFSISKKPVIPVNETITIQIDHLSEHSIEFNSKEKLTIR TDEMAPIGRVLSRFNVIVENPDDVSLIRFSIFNSNPSFNTTLPFSIGSKTGILRVSSK LVLTERVYNFKVAANLNGIEGKTDETDVSIEVLDSNDHSPVWSAKWMRQVPIPIGKVG EVLLKVDVTDQDEGDNGRVVYKINSELPLEINANTGEIKLIEFPKKGSNWIATVWAVD LGLPLSRMSALNLMFYKNGTKIPPKPKPIIIQESENKHSPIFSSFPEVVEVTEDAPFG TIVAKLQASDEDSGYNGLIRYVIHEVPESYLEILSVDEQSGEITVASDLTLLMKEKKE IVEIQVKVSAIDAGNPVKSTTKTMKLRIKDVNNHSPQFDEASRDTKNEFVGGQKREKN SNLFQPSYYVTISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNGAESSFISIDSKT GIIKLLKSLDREYQDVHNFAIIASDGGFPTRVSVTNLTLTVDDINDNAPRCVSQRSKA RIPEDLPHGAFVSCLAAFDEDIGQNSKLKFSLNSEKVPFRIDHHSGCLFIHAPESPLD YQKTPNFNLSIEVADHGDPMLSTTCHLYVELVDVAYNHLAIEFDDVAKEASVYENSEI GTEVIMIEAREMGDEQKLKAENLEYRIIGGDGWSYFSIDRKGTVRTTRILDRESKSAY WITVEARDSKTDLLKDSRRKAVLHVFIRILDRNDHRPVAKMPMYIASVAENSPANVVI VKVEATDADDVDNDAAAPLTFKIERGDPQSFFRIDLTSGYITTSGIRRLDREKQSEHE LWVSICDGGEPQLCSNVIVIVNVLDENDNAPTFTQAIHHYNVRSKFVGKLCRIFAVDS DEGENARLSYNITEGDPRFSIDENGNIITSEAIHGDESYALTVQATDHGTPSQQFAAT RVVLTANGAGQKAKKTKNSPPVIAGKKSDYVIPISDADQVGLTVGKLEASDADGDDLW WSISSGDSDSVFDVRQDTGQLLLAKKVELLKRGELRLNISVTDGQDWDHTTVIIQVSR QISQRPKFSASHYQTEVSERVAVGTQIYTLKASGETLGTKPLVYNLFSVDDISMEDKI RVEPSSGNVIVMEPLDYEAARRIRAVVQVQQANMKSFANFAVNINDENDNSPYFVDHT AWAFVDENDSVDDVLATVTAFDKDQGNNGIISYSIVSGNEESLFKIDSQSGEVRLARP LDPELQHVVSILRIRASDSAANSLKDEMNLHIQSSNMAPENAKFDRKVYQTTLHDSTR PGTPILVLSVLHHGSVSYKLEPNCSFFEVHTLSGAVHLAIWLTKNNNLKSIECTAIVE NSEGQQDTAKIVAKIIRTNQHSPVFREQIYRGTIRENMEPGSSVLSARQLPLVVSAID EDSGSNGLVGYRMLSAKDDEMFTIDQYSGAIRTKKSFDFEQVKEFSFYVQAFDMGQPP RRSLMPSLVIVSVIDENDESPLFPSPSIDVAMLLPTATGVFVGGQTAKDVDSIGTLRY FIKEKSSPFSVCSKTGNVYVKDAKTLSDEKKPFNVEIFVTDGKQSASYVMKVSHASEN SKFKFTRQEYHVSVVENTTVTPGTVILSVATVGDKLSHYSIVNPHESFFIHHGTGVIS STGVVVDREVSPVIRLVVEAKTHEKNPTIARTIVVIDVQNTNDELPTFIGTPYDVSIG TTEIGNAILEPKVIDRDEGDQVVISSDDMPEFFKLVGGKVVLAKKLPPIEDKDLEFNF KLIASDNSSVHRVEELVKIKVVDRARPVFSQSIYTAVISKESTKTTTVLVKVMAKSSL QAKSKGLIGYRIVDEKNYFKIDFVTGEIRLKSLKALEVAEYVFEVEAKEVIRPKMTAR VQVKIIVKSQFSSMQPPVFEEEKYSVSTPESASIGQRILTVKAKSPIENDIVEYKLSG GNDSGFKAFDIHPETGDVTISKSLNYENIQKYELKVTATSSVKQVSSEAELIVLIEDV NDEIPVFIKSEVDAQVSDSAISGQFITIMSATDMDTTSSLDDSNQKLLYKIVDGDETL FNISPQTGEVSLARQIEQEDLINEETKKVLNVSVTDGMFTAYARLMVEILRSGAMQPA PRFEQSHYVANALENTIVNKSALLTVAVKGGIPPLRYSLGPAASSNSSSNKDSWPVAI DKKTGRIHVSRVLNYHNDKRYQIPLVVEDATRRRAFSTLTLSVIDINDKPPFFVLPFY STSIPESAKEGDTILMVSATDEDENDTVRLKITIEYSLLDGSESQFFSVHPRQGTITV AKKLEHKAGVTLSLTIKATDSANPPHHATTTVEINIASESVKVPRFSNSHYLFFVPED ADIGNVIGRVQQMETEIDEVRFTIVSGADEPDTQLPFSVERSTGKIIVRSGLDRERRK QWKMTIRADAAGGVHAITTVTVDVGDINDNAPAFHGDYEKLTISEDAAVGTSVTIFSA MDRDDSPSGRIHFSLVQKDPHFEMNENSGWLTVSSQLDRETTDKYQLIARATDEGGFN TDLPFTIIVSDVNDSPPQFERDVFNVDLQLPSTTPILHFDIKDNDLSPNNQSLLFISQ GNEEGIYWIDSENNLLLKRPEMIEHKKNYSLKITAFDGVFETSSLVNVHLKTIEDSSV QCPEANKTVIIPENSKKGTVVLGESSLLGPNTTFKLIGDGIENVFVMNYRNGIVKVKD SGQVDYEKNQEFEFYRSMIQGNDELCKERITVLIENINDNPPKIIEKQLRVSIEENLP TSEDSRQYLTRVVAEDADFDIIKFRLLNEFKGIFGIDEESGVVTAVKTLDSESVGLFN LTVVASDGKFEDQATIIVTVIDQNDNAPTFEKSTYSMKVMESESIGYELARLQAFGGD TNETIVYSLKSSKHNQFVRLDLTTGVLTLAKPLDFETLSVLKLTVIAKDSGIPPLESE AQVEISVMDENDNPPKFEKDKYIGKVKENTKIGEKVLSVKAIDADSEHFGAVSYELEM ISEGTAEVRNSDSTPTHTLTIPFTINAQGDILINQSIDYEKVKKYNLKVIAKDGGRPP LLSETLLEIEIEDENDHPPMFDDCNMTAVVQEGEPIGHRLLKFLISDLDGPSNGAPFT VDIQGDGAKAFKVNDKLELLTAKKLEHRKKDKYLLTVIAKDVKGKSTDCPLTVYIRQA SRHAPTMKPMRIQVNTLQNELPEGVIGRLKAYDEDEEDQNGLLRFGIVEGSIQSPRAQ IQESRPIHAFRVDPTTGEIWSDHSISQGLHTFNVTVTDGKFTTVSYVEVQVNSIDNDV IDHAVSIRVRSMTVDEFMRNHIKEFRRIISHHLNLDDENSIQLVSVQSVPSIETSRNR RSRRSNSDDVEVLMTAQRGHGRGYLKPDHVYSRLKNDFQTLNDQSQRMRYQLITEMCT TGVCIRGECREVIELIEDNWTKVSTDEFSFVSPFHSRSAQCLCPDGFGGKRCEVETNQ CSKSPCENWQLCIPSVFNSTFECVCPLGMEGEKCSIPSCKNDGKCLEEAELSVGGDGY FEMSLSNEIESRMELEIELKTTTHNGVIMWSRGIHDYHLLRLVNGSVEYHWDAGTGTG IVASKTQIVDGQWHRITISRRQRRTRMTIDDDGLQEAFSPVGSTVVNLYRFSQKLVLG AKVDKGDVTEGVSACFRAISVDGIKLSKTRQGMKLFGVQPGCSALTSSPCNDLPCQHG GTCASHGKSQFVCQCPSRYSGNTCEIDLEPCASSPCPTGIQCIPFYNDYLCKCPNGFT GKHCEARGFEDHETSSCSKNVCGSSGQCISIPRHNLESSDFICNCTGGVLQSTPCTEK SEIFTNILEYLLKAEIVAIILGVLFLLLICCLAFITWKCCKKSNDPKYGAHCDVPHMR NTRVLVPVVPPPLPPRGFRNETSNFIGLSSSATTSTRPMVEVKPYSSDIRYSRSPSAC GSSKGTRKDPLPSDKFRRTDEVSNRIRGSDRRDPRGDVLTSLRTSPDDWMGIDDRMDS VLKYSRAAAGAVVVGDTELMPVVNDDDYMTMKPRKDKTFDREEDHKPPAIPAHATPLE SVLKFSSSSSGEEAPRNALYDDPISLNSQSFDDIDEEVNIHIS" gene <518403..>528513 /gene="Cre-cct-5" /locus_tag="CRE_20255" /db_xref="WormBase:WBGene00061767" mRNA join(<518403..518510,518652..518877,526682..526874, 526924..527134,527196..527960,528258..528389, 528445..>528513) /gene="Cre-cct-5" /locus_tag="CRE_20255" /product="CRE-CCT-5 protein" /db_xref="WormBase:WBGene00061767" CDS join(518403..518510,518652..518877,526682..526874, 526924..527134,527196..527960,528258..528389, 528445..528513) /gene="Cre-cct-5" /locus_tag="CRE_20255" /note="contains similarity to Pfam domain PF00118 TCP-1/cpn60 chaperonin family; contains similarity to Interpro domains IPR002194 (Chaperonin TCP-1, conserved site), IPR001844 (Chaperonin Cpn60), IPR002423 (Chaperonin Cpn60/TCP-1), IPR012718 (T-complex protein 1, epsilon subunit); coded for by the following C. remanei cDNAs: DR782350, DT934775, DY527583" /codon_start=1 /product="CRE-CCT-5 protein" /protein_id="EFO98580.1" /db_xref="InterPro:IPR001844" /db_xref="InterPro:IPR002194" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR012718" /db_xref="PFAM:PF00118" /db_xref="WormBase:CRE20255" /db_xref="WormBase:WBGene00061767" /translation="MAQASAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARA VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHE IGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN RERLVETAQTSLGSKIVNRSIRQFAEIAVDAVLSVADVETKDVNFEMIKMEGKVGGRL EDTILVKGIVIDKTMSHPQMPKELKNAKSTLFMFNLQVAILTCPFEPPKPKTKHKLDI TSTEDFKALREYERETFETMIRQVKESGATLAICQWGFDDEANHLLQANDLPAVRWVG GPEIELLAIATNARIVPRFSELTKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVT IFVRGGNKMVSWSYSSIFRIFKFQIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAEL AAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIEALSDLKAKQIETK NSFLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDVRVPDDEKMGS Y" gap 523451..523968 /estimated_length=518 gene <532461..>534499 /gene="Cre-atf-7" /locus_tag="CRE_20256" /db_xref="WormBase:WBGene00061768" mRNA join(<532461..532682,532793..533212,533391..533782, 533857..534142,534183..534299,534386..>534499) /gene="Cre-atf-7" /locus_tag="CRE_20256" /product="CRE-ATF-7 protein" /db_xref="WormBase:WBGene00061768" CDS join(532461..532682,532793..533212,533391..533782, 533857..534142,534183..534299,534386..534499) /gene="Cre-atf-7" /locus_tag="CRE_20256" /note="contains similarity to Pfam domain PF07716 Basic region leucine zipper; contains similarity to Interpro domains IPR011700 (Basic leucine zipper), IPR004827 (Basic-leucine zipper (bZIP) transcription factor); coded for by the following C. remanei cDNAs: DY529537, DY529349" /codon_start=1 /product="CRE-ATF-7 protein" /protein_id="EFO98552.1" /db_xref="InterPro:IPR004827" /db_xref="InterPro:IPR011700" /db_xref="PFAM:PF07716" /db_xref="WormBase:CRE20256" /db_xref="WormBase:WBGene00061768" /translation="MSCVAAAPLAAPPVATTMMASPSDSGELDVAAAVASAAAALISP MALPATMTNGRDMNKTSQILNDYLNMVVGKRVQLMGDSSSSFGLDTPNPKLMFTPLDL PTTAELMQRCLAVNPFEAKFREANQKISSGSMQPNTSGANQSLEALEANGGAPFGGSN AGSVSDLLLKIPQTSLQHSPGIFSNIQLLTAAGDSEGTTRENLKTADISKLLSVAGDF SAQAPRTADVLNAVLDMHSDRLHTINYLNNKPDFSALLRSPSSSAPNSASVLTNAMTI PSTSGASGTSLLCPPKTVSSYHSPMGASQPPSTQKSPADGGSWDHGEKQIKKEMPYFG DEAMMLMERSNMSSSGSDQDQGPSNTGSTASTSTGNPVGRPQNGTPGRGRGRGRSTTA DMQPDERRNTILERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQLLAIQTQNQVLR RELERVTALLTERESRCVCLKGIPMGDDQHGTSNRGGNSNGMYPSSDMLNGLNQINGM HMKLPKLG" gap 535733..535742 /estimated_length=10 gene <542583..>542954 /gene="Cre-ins-17" /locus_tag="CRE_20257" /db_xref="WormBase:WBGene00061770" mRNA <542583..>542954 /gene="Cre-ins-17" /locus_tag="CRE_20257" /product="CRE-INS-17 protein" /db_xref="WormBase:WBGene00061770" CDS 542583..542954 /gene="Cre-ins-17" /locus_tag="CRE_20257" /note="contains similarity to Interpro domain IPR004825 (Insulin/IGF/relaxin); coded for by the following C. remanei cDNAs: DR406261" /codon_start=1 /product="CRE-INS-17 protein" /protein_id="EFO98646.1" /db_xref="InterPro:IPR004825" /db_xref="WormBase:CRE20257" /db_xref="WormBase:WBGene00061770" /translation="MFSTRGVLLLLSLMAAVAAFGLFSRPAPITRDTIRPPRAKHGSL KLCPPGHLSQPNTIFISKITGGASFLDAFNLICPMRRRRRSVSENYNDGGGSLLGRTM NMCCETGCEFTDIFAICNPFG" gene complement(<543225..>544090) /gene="Cre-rps-1" /locus_tag="CRE_20361" /db_xref="WormBase:WBGene00061771" mRNA complement(join(<543225..543920,543968..>544090)) /gene="Cre-rps-1" /locus_tag="CRE_20361" /product="CRE-RPS-1 protein" /db_xref="WormBase:WBGene00061771" CDS complement(join(543225..543920,543968..544090)) /gene="Cre-rps-1" /locus_tag="CRE_20361" /note="contains similarity to Pfam domain PF01015 Ribosomal S3Ae family; contains similarity to Interpro domain IPR001593 (Ribosomal protein S3Ae); coded for by the following C. remanei cDNAs: DT934731" /codon_start=1 /product="CRE-RPS-1 protein" /protein_id="EFO98628.1" /db_xref="InterPro:IPR001593" /db_xref="PFAM:PF01015" /db_xref="WormBase:CRE20361" /db_xref="WormBase:WBGene00061771" /translation="MAVGKNNNKMGKKGGKKKAVDPFSRKEWYDIKAPNMFNTRQVGK TLINRTQGTKIASEGLKGRVFEVSLGDLNNSEADFRKFKLIAEDVQGKNVLTNFHAMS MTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSANQVKKTSYTKTSKIR KIRSEMISCIEKEVCYIFLLCVHQYCFQVTGCDLKEVVSKLIPDSIGKDIEKTCSKLY PLQEVYIRKVKIIKRPKIDLGRLHDLHGESMTVGADGEKVDRPDDYEPPVQQEV" gene <544877..>547562 /gene="Cre-pqn-45" /locus_tag="CRE_20258" /db_xref="WormBase:WBGene00061772" mRNA join(<544877..545049,545092..545431,545477..545565, 545610..545719,545764..547316,547361..547430, 547477..>547562) /gene="Cre-pqn-45" /locus_tag="CRE_20258" /product="CRE-PQN-45 protein" /db_xref="WormBase:WBGene00061772" CDS join(544877..545049,545092..545431,545477..545565, 545610..545719,545764..547316,547361..547430, 547477..547562) /gene="Cre-pqn-45" /locus_tag="CRE_20258" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PJ37; coded for by the following C. remanei cDNAs: DT934807, DR408173, DY527886" /codon_start=1 /product="CRE-PQN-45 protein" /protein_id="EFO98518.1" /db_xref="WormBase:CRE20258" /db_xref="WormBase:WBGene00061772" /translation="MTSHLDDEGLHPMVSTLLGGGIFPSPPPRTYDRERMMELRSTKA SMTRPENLSEDYNGEDGKFSPLKWLEHRWEIEGIKNRPMSKKIDSLCAGADENTGLSP QRRAFSSGCKAPTDDKGRDGIRQSYKNPVTLQITGEYERLGGHGKNWRNGSTGGADKF ASRGTDFKTSFQKGGQVDRGGVRGTEWKKDATRGTKFGSRREDRMNSVSGSEKLPEWA DGPTTMDDMIELRGFDEPKKGKNKKNPKEKKEKEGKPEAPECGGSRPSSAGLKVAEPF DDPAIAYSSSGGGALPATDHELAALLGCLDLQKASRKTDGDEMAFNHKSEDSAAGTSR LSRFFGKKSKSPEIDAMLASVGVGNNENVANPMLAKLFGHSGGDNNASSSGLGDMKGG MRLEDLEKGMDTKESSKVSPLQDPSQQAQLLHHLQKVAKQQAESGQHLQHHRQPTPPN GGPIHPHQMHHPMVHPGMPIVADPALLASFAQNPLVLNAYVENQLQEATNAAIRANNG QQLPAQLRKFQGMVRYFSFCYFSDEQLRIASMRNKAFLQSQTITFVGLQQQHQTLQHQ HQQHQHLQQQKGRTPAMIPASVQRQLQKSTSNADQKKEKTSSQSPPESAQDTSDPQNH VDAANQLKKLHMQQNYANMVQAMNSGVGWQRGNGAVNGQQQQLPPNVQMLMAQHQQAQ MHHLKIMLSRAQQQQMLMAKLQHMQQQQQQAQVFLNSKVLNGYLGFQMASLQERQGSN HSHLQQQAMPSELSQVGPIQTPLEKLLASVGVQGSQFTGSGDRIPTSARPMSLEDLEK QLTAAGQK" gene <550424..>554097 /gene="Cre-ndg-4" /locus_tag="CRE_20259" /db_xref="WormBase:WBGene00061773" mRNA join(<550424..550664,550815..551055,551097..551254, 551423..551716,551770..551951,552046..552321, 552365..552468,552518..552656,552760..553143, 553948..>554097) /gene="Cre-ndg-4" /locus_tag="CRE_20259" /product="CRE-NDG-4 protein" /db_xref="WormBase:WBGene00061773" CDS join(550424..550664,550815..551055,551097..551254, 551423..551716,551770..551951,552046..552321, 552365..552468,552518..552656,552760..553143, 553948..554097) /gene="Cre-ndg-4" /locus_tag="CRE_20259" /note="contains similarity to Interpro domain IPR006621 (Nose resistant to fluoxetine-4, N-terminal)" /codon_start=1 /product="CRE-NDG-4 protein" /protein_id="EFO98627.1" /db_xref="InterPro:IPR006621" /db_xref="WormBase:CRE20259" /db_xref="WormBase:WBGene00061773" /translation="MRSFLLLLTLCQLAFSCTLCHFRTPPRPRPLDQYKLPKIGAKQF DLEKMPKLCNSAKQLPVEPECQAQFEKIFCSADKLTDTFRGCPTNVNKSLSEQEQCSQ CAYQKANNGWVLRCKLENTGPKNNTNITGFDSLGKPAAGITEGNYYWLGDYELCAALA TEGSFNGQYCRIEMEVPDAGVESGCPQTDPLSIILGVCFPSACSVSDLAKVSALYLPY NLKVECESESRWSLVTIFLFVLFGIWIIPQAVATVQPSLNDSILSCFSIPENAKRTLS TRRETPYLHVVHGLEFLLFFSIVCGMVYNFMLPYIENVAFSFEGVTSLSMHIVNNYSF QIDGLLALSAFYTTYMLFGNIPTIRAALDAVCQRIARFYKNFRFWPAYIVCVLFMYVI FPGVSSGPMWIHTDTVSRCESGWWKNIIFINNWFNVTDTCVDIGYVISMEAQYFLLLV ILIFLSSKFPMLTQIFAYLMLFSSIVFSFLRAYKLSLPPAPILSLEPEPLEKTYALFD QLMLSLFARSSNYCLGFVFGIGCATASEDLRKMGLRYFNHKLLAVACIVCAALTLFGA FPYSAWAWSDNNTLWNALYAAFHRPLWAFSLLSFVYLCHHGAFSELQNLFSINKILLF SEWLNALLEWRVFTPLSKVTWIALVVAEPIILYFFSSLNKPAYATHWSTMYTAISAAL LAYFIAMFLDVFVTRPVRFLIYPEQRHRYAQAHTQEQQAN" gap 556769..556778 /estimated_length=10 gene <565673..>570172 /gene="Cre-ceh-43" /locus_tag="CRE_20260" /db_xref="WormBase:WBGene00061774" mRNA join(<565673..565901,567418..567547,567602..567677, 569193..569402,569912..>570172) /gene="Cre-ceh-43" /locus_tag="CRE_20260" /product="CRE-CEH-43 protein" /db_xref="WormBase:WBGene00061774" CDS join(565673..565901,567418..567547,567602..567677, 569193..569402,569912..570172) /gene="Cre-ceh-43" /locus_tag="CRE_20260" /note="contains similarity to Pfam domain PF00046 Homeobox domain; contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR000047 (Helix-turn-helix motif, lambda-like repressor), IPR001356 (Homeobox)" /codon_start=1 /product="CRE-CEH-43 protein" /protein_id="EFO98586.1" /db_xref="InterPro:IPR000047" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="PFAM:PF00046" /db_xref="WormBase:CRE20260" /db_xref="WormBase:WBGene00061774" /translation="MDPTKAFDYNGSDYHYPPGAAGGAANGNGASVSPYFAYSHFPGS SSTNGASSVGIYGTPQQSSAYMYNQGPGSSPEEGFPEHTTTKIVEGCEAKYNTKGKKM RKPRTIYNTQQLAQLQKKFDKTQYLALPDRAALAAELGLTQTQVKIWFQNRRSKQKKQ KTPGTSDRASDEDDDTEESKPESSPMSDSMMNQVSTAPQRTLGSIKTELKEEYGTDNS SPPQNHPTPNGSMMPDWPSLPHLPSVSSQHLPPVSTLPPMPGVAQLNGYEIKYDADKQ PQPHLLNQYDMSYNYFYAPSYPTYQ" gene 566074..566146 /locus_tag="CRE_32167" /db_xref="WormBase:WBGene00186575" tRNA 566074..566146 /locus_tag="CRE_32167" /product="tRNA-Arg" /db_xref="WormBase:CRE32167" /db_xref="WormBase:WBGene00186575" gap 566820..566849 /estimated_length=30 gene complement(<572563..>573761) /gene="Cre-nex-3" /locus_tag="CRE_20362" /db_xref="WormBase:WBGene00061775" mRNA complement(join(<572563..572637,572707..572820, 572864..573266,573311..573531,573577..573675, 573720..>573761)) /gene="Cre-nex-3" /locus_tag="CRE_20362" /product="CRE-NEX-3 protein" /db_xref="WormBase:WBGene00061775" CDS complement(join(572563..572637,572707..572820, 572864..573266,573311..573531,573577..573675, 573720..573761)) /gene="Cre-nex-3" /locus_tag="CRE_20362" /note="contains similarity to Pfam domain PF00191 Annexin; contains similarity to Interpro domain IPR001464 (Annexin)" /codon_start=1 /product="CRE-NEX-3 protein" /protein_id="EFO98621.1" /db_xref="InterPro:IPR001464" /db_xref="PFAM:PF00191" /db_xref="WormBase:CRE20362" /db_xref="WormBase:WBGene00061775" /translation="MATAKIHFKPYFDEVLAAEALEKALRNKEKLKVLEILVSVNNTQ RQMIRTPYKTRYGKDLEEEIKKVFSGDFEDFLVALLQTPTKLDVTELNRAVKGLGTNE KNLIEILTTRTNEEIEATKNTYFMTYGKSLEDAISADTSGDFRRLLIIILQAKREETG FANTFNVGNHAAQILKSFDKKSGIEKFDAFKIFATSNGAHIQKVIEEVERQSGKDFQK IADKELSGDFKNLILSLIETSSNKPRFLANSIHLATKGIGTRDKDLIRILVARSENDL VLIEHEFQVLFGKPLTQLIKDECKAEYRDGLTMLVKGNSRP" gene <575466..>579052 /locus_tag="CRE_20261" /db_xref="WormBase:WBGene00061776" mRNA join(<575466..575531,575575..575921,575966..576659, 576709..577115,577162..577230,577275..577436, 577485..577599,577649..577838,577887..578437, 578467..578782,578841..>579052) /locus_tag="CRE_20261" /product="hypothetical protein" /db_xref="WormBase:CRE20261" /db_xref="WormBase:WBGene00061776" CDS join(575466..575531,575575..575921,575966..576659, 576709..577115,577162..577230,577275..577436, 577485..577599,577649..577838,577887..578437, 578467..578782,578841..579052) /locus_tag="CRE_20261" /note="contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98497.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="WormBase:CRE20261" /db_xref="WormBase:WBGene00061776" /translation="MDFPFEYVERACSYPSFNNHSVKKSAFDESIKKIGKLKPNDQAQ SEEEEIYGEAHDTVVNVKEMQLLNKIKELEKEAKKEEDVEKKKKDWVAYFSSSECSSS RSENIDSFDDTSETDVVENLFANEQEKVAMNLRKFKIMRKCCCTDSECKTNTEITISS SSSSTSTSSEEDGKSSPMTDGFESSEIESALKSMDPSSKETDSFSDEEMNIDDEIEHL ENLLKDIVKREERGGRSQVEESDDSGEELDNMFDEQKSKAKTSSKSAENPNVEQATAV PMSISSTDSSTTCISSEISITDSIEISSSDPDMEDPEYDVGKFNWQSDDLYESSGTDS EIENLLELLRESMASVESVFSSGALVGDDSQLQREKMQNFKQPLPDSLETKKKKYAML EEQDDYEKLVDVLTPTSTIRMKQLYFLQISKQLWLVQQLDSGRICSVKLVNRKNPEPP NLQINIDVIECIDDYLLQTLDFQRERRVLYELLPELSQPSHIARLLDIGFNNDYKFLV YEDLGMNLLTVFEQFGPALCPATIFLITYFTFNSIKELHSLDFVHCDIRPSSFSVIHY PFNIKICDYSKCVKKKPLLKTTDSMRPESFSPRIFHRKDGGFDQFVDFESWIYTMLYL CTSQGLPWFSDSQNMLERKETFFNDPTDFVYNGCADAIPMAATLISDSKVTYEDFLDQ MNFIFSVDVMQFSDNTQPRLWSIKEFEEIRKSKRPESDDDNAIELIESHWNPLDESDS ADGRDTDENEKGKNEKEKEEKERKSKNEKKKMSVKEEKTAISSAELSSEQWSESSSGL EKKKMPTKPTILKIVPPPRSPPKKADYNMEASSATEQFSMPSAMPRGKPLTPVKVEKK KPPPPVRRINVPAVEAPKAPKGKKNKRQLLTRQFMFEMNKDLNSAQSSISYDSSASSF SSWTSSTGSSEDLDIGEKAFKWSQKSGDESNVEFFEDLNPAEREAYRQYENMVAIRYQ DNLAPSSSSEVDPLSDIDSEEKQVIIDELKKRDVALGWDMISNKDTSQEEIMPEDHPN EIVKRKKKDRKE" gene complement(<579199..>583221) /gene="Cre-cku-80" /locus_tag="CRE_20363" /db_xref="WormBase:WBGene00061777" mRNA complement(join(<579199..579284,579329..579889, 579935..580020,581181..581241,581291..581606, 581651..581781,581823..582081,582128..582200, 582252..582335,582618..582795,582839..583028, 583078..>583221)) /gene="Cre-cku-80" /locus_tag="CRE_20363" /product="CRE-CKU-80 protein" /db_xref="WormBase:WBGene00061777" CDS complement(join(579199..579284,579329..579889, 579935..580020,581181..581241,581291..581606, 581651..581781,581823..582081,582128..582200, 582252..582335,582618..582795,582839..583028, 583078..583221)) /gene="Cre-cku-80" /locus_tag="CRE_20363" /note="contains similarity to Pfam domains PF02735 (Ku70/Ku80 beta-barrel domain), PF03731 (Ku70/Ku80 N-terminal alpha/beta domain); contains similarity to Interpro domains IPR005160 (Ku70/Ku80 C-terminal arm), IPR005161 (Ku70/Ku80, N-terminal alpha/beta), IPR006164 (DNA helicase, ATP-dependent, Ku type), IPR002035 (von Willebrand factor, type A)" /codon_start=1 /product="CRE-CKU-80 protein" /protein_id="EFO98489.1" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR005160" /db_xref="InterPro:IPR005161" /db_xref="InterPro:IPR006164" /db_xref="PFAM:PF02735" /db_xref="PFAM:PF03731" /db_xref="WormBase:CRE20363" /db_xref="WormBase:WBGene00061777" /translation="MPPKKKSSPGATVILIDAGSNMSEKSSDNGKTDFENALSTADWI VSRKLFSEDPELFSIMSYNIGSDYTSESGKIFKGVAVHSEEFAPAKFDHLKFITTELQ QNTENTEPNFFQGVLAAVHLLKEHVIENPNPSGITLIVLTNGMNENIRQENIDLLVDA ITDCQADLMIIGIKENPEYPASRLAELVETLEGRTYTFQNVASMLSNYQARQKSERKF NKMWDIAPGIRLPVTFALKSEKSSALLKFKNADSEGNEMVRLEQMHVETQNPVDTGHD VKSEDISTADSASKFLPKNAKNYKAVENIKTMHGYNFGKSVIMMDPEYLKEKYNDHNF NEGQTGGVLKLIQFTKKANILDSYLADASAKTVLPSLNSPTSGATKATVALIEAMLSL RVAAICRYTFHAKSHVQIVALLPHRDEDTGVVYLRSVKLPFSDDMRTLKFPKFSFDED EVDSNKPTVAQLSVVDDLIDCMQLEETVISSLVEGGMSDPKLQMQCHFLKSLVLHPND TMENRSIRTNEILDIIMAPKRKVETESSGMFQKLNREFNLQPIQKTKRERVTVEPEDI QTMISEWADKKLKMSSQDDESEEGPSQKKKKFNTSGTKKISRREEVRMEIVETDGASH VCSKMLEMISNTCKFQPNGSITGFFQLLINELNLIRSVFVETSRCDEFNELLKKLKEE EDFEPFAAVLAEEKSCNPISSTEVSTSDISYSDAAEFWEE" gap 580768..580777 /estimated_length=10 gene <583729..>584432 /locus_tag="CRE_20262" /db_xref="WormBase:WBGene00061778" mRNA join(<583729..583834,583886..584194,584278..>584432) /locus_tag="CRE_20262" /product="hypothetical protein" /db_xref="WormBase:CRE20262" /db_xref="WormBase:WBGene00061778" CDS join(583729..583834,583886..584194,584278..584432) /locus_tag="CRE_20262" /note="contains similarity to Pfam domain PF09446 VMA21-like domain; coded for by the following C. remanei cDNAs: DR776543, DR777561" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98600.1" /db_xref="PFAM:PF09446" /db_xref="WormBase:CRE20262" /db_xref="WormBase:WBGene00061778" /translation="MADTIDQDPDFELVDGAERKSSTSDSFEAVDDKKTDSQSVSDNE EDEAEKTNENREAEEEKKLPFVDQSIKDDAERVPEKDGEDLVEDALNAPIRPDQEQFY TAEASNRAITLLIAFSAMMFTVPLLVMATLYYYVFIDHFHLPPKDAMLYAGIGAAFVV ILIAAAFCYIAWKEEKDAEDKLKAEKKKE" gene <584899..>585345 /locus_tag="CRE_20263" /db_xref="WormBase:WBGene00082231" mRNA join(<584899..585064,585203..>585345) /locus_tag="CRE_20263" /product="hypothetical protein" /db_xref="WormBase:CRE20263" /db_xref="WormBase:WBGene00082231" CDS join(584899..585064,585203..585345) /locus_tag="CRE_20263" /note="contains similarity to Pfam domain PF09446 VMA21-like domain" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98545.1" /db_xref="PFAM:PF09446" /db_xref="WormBase:CRE20263" /db_xref="WormBase:WBGene00082231" /translation="MATPSSVPPSTMANLFPNFRDQEVQSAVKNLLAYSLVILIVPLA SMFLLKQFFFEALLGFASNDALTYSAIIAVILVHVVLGIWLLAATKQEDRKKRENKQD " gene <585545..>586847 /gene="Cre-pdcd-2" /locus_tag="CRE_20264" /db_xref="WormBase:WBGene00061779" mRNA join(<585545..585563,585626..585696,585765..586379, 586426..586690,586738..>586847) /gene="Cre-pdcd-2" /locus_tag="CRE_20264" /product="CRE-PDCD-2 protein" /db_xref="WormBase:WBGene00061779" CDS join(585545..585563,585626..585696,585765..586379, 586426..586690,586738..586847) /gene="Cre-pdcd-2" /locus_tag="CRE_20264" /note="contains similarity to Pfam domains PF04194 (Programmed cell death protein 2, C-terminal putative domain), PF01753 (MYND finger); contains similarity to Interpro domains IPR007320 (Programmed cell death protein 2, C-terminal), IPR002893 (Zinc finger, MYND-type)" /codon_start=1 /product="CRE-PDCD-2 protein" /protein_id="EFO98631.1" /db_xref="InterPro:IPR002893" /db_xref="InterPro:IPR007320" /db_xref="PFAM:PF01753" /db_xref="PFAM:PF04194" /db_xref="WormBase:CRE20264" /db_xref="WormBase:WBGene00061779" /translation="MSRCTWGKIGGKPSWLNPKVLPKSSDLLCSVCEKPMCFLMQVCA NGGESDPPHAFHRTLFLFVCRNPGCSRPNDASNLKAFRCQLPRANDFYSFDGPMNPDF GDVPDPRALTDGPGLCKICGCAAAKKCAKCQVARYCSQAHQVIDWPQHKLECAEVAVN GSISEEPKNPRNAFVFKEFEVEIGQEYMPANLFDGISDDEEDDDNEEDGNDEDETEEE KKARIRDFEKFLKENKEKNADMTKEDLDAATAEQPKDIDFDKFNRLVNLNPDQIVRYK RYGLPLRATGRSELPEVVEPCDLCGSPRRFEMQLMPHLLSLIDVDAIGQSIDWASVYV FTCSASCEIADYGYAKELVVKQDFI" gene <587032..>587446 /locus_tag="CRE_20265" /db_xref="WormBase:WBGene00061780" mRNA join(<587032..587181,587231..>587446) /locus_tag="CRE_20265" /product="hypothetical protein" /db_xref="WormBase:CRE20265" /db_xref="WormBase:WBGene00061780" CDS join(587032..587181,587231..587446) /locus_tag="CRE_20265" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98608.1" /db_xref="WormBase:CRE20265" /db_xref="WormBase:WBGene00061780" /translation="MENSPENIKHDMPVGSEEDVEDELASPNLYEESMAEITLNETRG EGPGGHDSDPFDRSGEYDEDVNLEAPPPITPDIPEISTEVLVSLRNRVANSEASSIDI RNPFDDSDQNKKTELSPSS" gene complement(<587618..>588695) /locus_tag="CRE_20364" /db_xref="WormBase:WBGene00082239" mRNA complement(join(<587618..587786,587832..587974, 588021..588049,588680..>588695)) /locus_tag="CRE_20364" /product="hypothetical protein" /db_xref="WormBase:CRE20364" /db_xref="WormBase:WBGene00082239" CDS complement(join(587618..587786,587832..587974, 588021..588049,588680..588695)) /locus_tag="CRE_20364" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98603.1" /db_xref="WormBase:CRE20364" /db_xref="WormBase:WBGene00082239" /translation="MLVIVYDSEYKLGQYRPRNNIFWYTSISMTGTLFCFIIGKLSLL AYQHSKERLVLESLKTISRTLKEADDEDQIKRRSAIRKIFRLGRRRKRKTEVSSTDVT SQKTNSIQALIRSNNK" gene <589161..>591276 /locus_tag="CRE_20266" /db_xref="WormBase:WBGene00061781" mRNA join(<589161..589340,589391..589540,589685..589735, 589773..590187,590202..590395,590461..590547, 590709..590875,590922..591034,591078..591159, 591207..>591276) /locus_tag="CRE_20266" /product="hypothetical protein" /db_xref="WormBase:CRE20266" /db_xref="WormBase:WBGene00061781" CDS join(589161..589340,589391..589540,589685..589735, 589773..590187,590202..590395,590461..590547, 590709..590875,590922..591034,591078..591159, 591207..591276) /locus_tag="CRE_20266" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98626.1" /db_xref="WormBase:CRE20266" /db_xref="WormBase:WBGene00061781" /translation="MIHSSDVPFFISAPQIISSLGFMMGVCDPKDTKGLVKSLTVKEN KRENKNNSKDKKDERKHDYLVDHTLKFVHKWSAELRTLLTPGDYYRERRVYAHPKYVN PRNENTFQLFRWFRVEEKIFDGPEEHSVDLDFTFSVQTEISPLQKIFILWSWEQSNID RMKEKRMVEEISTKVQSKKKTNENKKVIPNQLLPTIPSNSPSLQKKKEICEMDTKTPI LAWISHAVVEIPDEFFDGEKVYTYGNGEYLKVHDSPSQSIRIYKANFVCQFHASTFFK DFNTIIIPTQNLQLVMLILYDYEDSKLCPLIEMRNFASSYFNSKGPCLVRKQSKAPPT VIKSIYIPNWRKIEFPANRIAHHLVATMNLHSIFVPGGFGDLAIADAIPSATGDPKQV SHLQHYGLLSLRNSPKREIVKNQEVRSFLRRNTRKKTGLKIEEKRKEEEVKKAIPYLD LKSPATEVVHYPICVILWDKNRNLPAYMGKVTGNEEEEEMEETDEPETTDKK" gene complement(<591496..>592002) /locus_tag="CRE_20365" /db_xref="WormBase:WBGene00061782" mRNA complement(join(<591496..591618,591672..591818, 591862..>592002)) /locus_tag="CRE_20365" /product="hypothetical protein" /db_xref="WormBase:CRE20365" /db_xref="WormBase:WBGene00061782" CDS complement(join(591496..591618,591672..591818, 591862..592002)) /locus_tag="CRE_20365" /note="contains similarity to Pfam domain PF03650 Uncharacterised protein family (UPF0041); contains similarity to Interpro domain IPR005336 (Protein of unknown function UPF0041)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98488.1" /db_xref="InterPro:IPR005336" /db_xref="PFAM:(UPF0041)" /db_xref="PFAM:PF03650" /db_xref="PFAM:UPF0041)" /db_xref="WormBase:CRE20365" /db_xref="WormBase:WBGene00061782" /translation="MSRVVSRVTTYFKQHSTAEWKNYFLSTHFWGPVANWGLPLAALG DLKKNPDMISGPMTSALLIYSSVFMRFAWHVQPRNLLLFACHLANFSAQGAQLGRFVN HHYLHYVEDPVHHRLMVKKEILEHVHDAEIAKAH" gene complement(<592635..>595351) /locus_tag="CRE_20366" /db_xref="WormBase:WBGene00061783" mRNA complement(join(<592635..593493,593538..594062, 594110..594507,594584..594717,594777..594868, 594915..>595351)) /locus_tag="CRE_20366" /product="hypothetical protein" /db_xref="WormBase:CRE20366" /db_xref="WormBase:WBGene00061783" CDS complement(join(592635..593493,593538..594062, 594110..594507,594584..594717,594777..594868, 594915..595351)) /locus_tag="CRE_20366" /note="contains similarity to Pfam domains PF07713 (Protein of unknown function (DUF1604)), PF01585 (G-patch domain); contains similarity to Interpro domains IPR011666 (Protein of unknown function DUF1604), IPR000467 (D111/G-patch)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98641.1" /db_xref="InterPro:IPR000467" /db_xref="InterPro:IPR011666" /db_xref="PFAM:PF01585" /db_xref="PFAM:PF07713" /db_xref="WormBase:CRE20366" /db_xref="WormBase:WBGene00061783" /translation="MNRKKLSAYGQEFEDDEEDSTVSKKPTQIHEEIATDEKGKRRFH GAFTGGFSAGYWNTVGSKQGWVPQEFSSSRDARGDKIKQKAEDFMDAEDLGEYGISSR TIKQTSAFGDGGSSGQKRKMAWERDSESVSTITQMFEDVVKPVSSSIGVRMLRSMGWR EGRGIGLANVKQKQHRGGMSSEAQFDREQAAKVAPMYEFANENAIVKQLTPLSGSHGI GYQGLRQTTVLDESYGRTALALKSDKKSSKGIKGQAFGVGAFEEEDESVYSNYDLSQF DFSLDLAGTSEESNLKTQKIDTAFELQPKRLNPRKFYAAPRVPQNFRGEHKPIPMDVS RLPQLMKDDVKQMNAIQRAKFLGEDRVGALEIGEMGSKKPAERRSRWDIRANEVERRE SQRGGEADEERDRRLRNRIEFPDEPMRQARFKEFLHYIRRGLPYPQPTDLTVWEWEWE KKEFESKLTTEERGMLPEVLSRAQPLAKTAIAAPIHEMMASKFVKEAGGDLKVGTKDE DKLAAVKMEMFGERTRQCFEWYPDSILAKRFNVPHPFPGSEMVGVPALQKTNWKRKET LEDIGGISTSIGLPNTANEVEMRERLLKSRARRTADENKQKNSDDEESYEDADRTADL EEDENDKEEEKAPKSFFDLIFGEGGVGSDASDKSDDEREEENERQKALKKREEELIRK KQEKEKREEEEREKIVREREKLESNDRSETRRDKDEDEIQIIEEISTTTSSYGPALPP RPSLSKDAVIQFLEKNLSKKDDSKKKHKKQKDKKHSKKSKKSKKSKKEKKRKRHSSTS DDGSSDDSDEWQEKKL" gene complement(<595574..>596388) /gene="Cre-prdx-3" /locus_tag="CRE_20367" /db_xref="WormBase:WBGene00061784" mRNA complement(join(<595574..595663,595684..596139, 596221..>596388)) /gene="Cre-prdx-3" /locus_tag="CRE_20367" /product="CRE-PRDX-3 protein" /db_xref="WormBase:WBGene00061784" CDS complement(join(595574..595663,595684..596139, 596221..596388)) /gene="Cre-prdx-3" /locus_tag="CRE_20367" /note="contains similarity to Pfam domain PF00578 AhpC/TSA family; contains similarity to Interpro domains IPR012335 (Thioredoxin fold), IPR000866 (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen)" /codon_start=1 /product="CRE-PRDX-3 protein" /protein_id="EFO98530.1" /db_xref="InterPro:IPR000866" /db_xref="InterPro:IPR012335" /db_xref="PFAM:PF00578" /db_xref="WormBase:CRE20367" /db_xref="WormBase:WBGene00061784" /translation="MLGSAVRALSRTVPSTVAVATRQFGVSRSLLSLRPLGPKNAVPA FKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRTLGAEV VACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKNIAESFGVLDKESGLSYRGLF LIDPSGTVRHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEVIISVRAAVCPADWHEDS PTIKPGVSSSKEYFNKVNK" gene complement(<596797..>597415) /gene="Cre-rnp-4" /locus_tag="CRE_20368" /db_xref="WormBase:WBGene00061785" mRNA complement(join(<596797..596904,596984..597229, 597341..>597415)) /gene="Cre-rnp-4" /locus_tag="CRE_20368" /product="CRE-RNP-4 protein" /db_xref="WormBase:WBGene00061785" CDS complement(join(596797..596904,596984..597229, 597341..597415)) /gene="Cre-rnp-4" /locus_tag="CRE_20368" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); contains similarity to Interpro domains IPR008111 (RNA binding motif protein 8), IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1); coded for by the following C. remanei cDNAs: DT933498, DR780289, DT937291" /codon_start=1 /product="CRE-RNP-4 protein" /protein_id="EFO98558.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR008111" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CRE20368" /db_xref="WormBase:WBGene00061785" /translation="MGDNDVEMEDVVANAEKSKGRGLAQARNREKIIYDVVDEESTAT SGGPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVE YETQKEANEAIEQSNETDLLGQNVKVDWCFIKGKKSSGRR" gene complement(<597627..>598949) /gene="Cre-snfc-5" /locus_tag="CRE_20369" /db_xref="WormBase:WBGene00061786" mRNA complement(join(<597627..597762,597817..597999, 598058..598645,598711..>598949)) /gene="Cre-snfc-5" /locus_tag="CRE_20369" /product="CRE-SNFC-5 protein" /db_xref="WormBase:WBGene00061786" CDS complement(join(597627..597762,597817..597999, 598058..598645,598711..598949)) /gene="Cre-snfc-5" /locus_tag="CRE_20369" /note="contains similarity to Pfam domain PF04855 SNF5 / SMARCB1 / INI1; contains similarity to Interpro domains IPR006939 (SNF5/SMARCB1/INI1), IPR017393 (SWI/SNF chromatin-remodeling complex, component hSNF5/Ini1); coded for by the following C. remanei cDNAs: DR778079" /codon_start=1 /product="CRE-SNFC-5 protein" /protein_id="EFO98466.1" /db_xref="InterPro:IPR006939" /db_xref="InterPro:IPR017393" /db_xref="PFAM:PF04855" /db_xref="WormBase:CRE20369" /db_xref="WormBase:WBGene00061786" /translation="MSSSTKTLSQTYGPRPQSFSLDETGEKYYIGSEIGAYLRLHRGT LYKKYPLLWRKVATSDDKDKLKQIAMSNAFLHTNIMLLKAHEVDELLDGSEEKYRAAG AAPSTPRTEGVSRTVTKTPAAAWGGQQVTSGSHHLESVPCSCPIAHSRGRMKHRELVY SAEDLEMSKKVMENAEEGEDLVPIRLDMELEGIKLRDTFCFNRNEKMVTPEMIAEIMC EDLDLPVAVFQPAITAAINQQLEASTEAPPLDPNTCDQRAVLKLNINVGNQSLVDQFE WDMSDPQNSPEEFARNICKELGLGGEFMSGIAYSIRGQLQWNQRTYAFSESPLATVDC PFRTATEVESWGPFLETLTDAEIEKKMRDQDRNTRRMRRLVGGGFNY" gene <599365..>600785 /locus_tag="CRE_20267" /db_xref="WormBase:WBGene00061787" mRNA join(<599365..599955,600001..600175,600207..600262, 600399..>600785) /locus_tag="CRE_20267" /product="hypothetical protein" /db_xref="WormBase:CRE20267" /db_xref="WormBase:WBGene00061787" CDS join(599365..599955,600001..600175,600207..600262, 600399..600785) /locus_tag="CRE_20267" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98619.1" /db_xref="WormBase:CRE20267" /db_xref="WormBase:WBGene00061787" /translation="MNFTLICNLLLFGACYKLFRNWEIPVNLWYSECIVDILGYDFIY RFDPFRVVGGFPTLIDSFFENIFEKTTEASKSSNFLLEDLQYPVLSSQFRRFCWAFSS ENTDNVLRKLNWECPILESSNQCITVVKASGCLESSQLSYNFWEIPDSSIECFHVSKG SIDCLKPFLRGNICENVVTSIGRNGNNSTFIEVDDIFINTQVIQKYAEESEVGVSKTS KNTSEVNEYQNSSFCKNYSIHETVLVGGENGTSNAFIYIFAILPFGINSTNLLKTTFP IVLSSISFRTYRYLTPNSTFCGSSTVSIYHTRGFVYSAVVTSSPSESSDSDSQKHTIL YFDLPQTPPRSKFELQRGRFHCPSETACITEILYPFIFLDSIELPYQIGILVVSALLG IVILSKLNNE" gene complement(<600967..>601769) /locus_tag="CRE_20370" /db_xref="WormBase:WBGene00061788" mRNA complement(join(<600967..601056,601109..601193, 601243..601349,601396..601512,601558..601668, 601719..>601769)) /locus_tag="CRE_20370" /product="hypothetical protein" /db_xref="WormBase:CRE20370" /db_xref="WormBase:WBGene00061788" CDS complement(join(600967..601056,601109..601193, 601243..601349,601396..601512,601558..601668, 601719..601769)) /locus_tag="CRE_20370" /note="contains similarity to Pfam domain PF03227 Gamma interferon inducible lysosomal thiol reductase (GILT); contains similarity to Interpro domain IPR004911 (Gamma interferon inducible lysosomal thiol reductase GILT)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98506.1" /db_xref="InterPro:IPR004911" /db_xref="PFAM:PF03227" /db_xref="WormBase:CRE20370" /db_xref="WormBase:WBGene00061788" /translation="MIVLLVAFLFPLLVQSQQVNVTIFTESQCPYCTKLLREQIWPFY VNRPGIMNLQIVPFGKGDCIYDYNRNFHCTCMHGATECDLNRLQNCAISYFPRRHLGL VTCLQGLGTLREGFSKCLSRLSPNTQRKLIECATTQTGELLNYYSMVNTHRAGVRIWP TMYVNGVFFDRSYPVEHKLCEHTAWC" gene 606237..606319 /locus_tag="CRE_32513" /db_xref="WormBase:WBGene00186921" tRNA 606237..606319 /locus_tag="CRE_32513" /product="tRNA-OTHER" /db_xref="WormBase:CRE32513" /db_xref="WormBase:WBGene00186921" gene <606278..>607097 /locus_tag="CRE_20268" /db_xref="WormBase:WBGene00082220" mRNA join(<606278..606298,606804..606872,606920..606975, 607022..>607097) /locus_tag="CRE_20268" /product="hypothetical protein" /db_xref="WormBase:CRE20268" /db_xref="WormBase:WBGene00082220" CDS join(606278..606298,606804..606872,606920..606975, 607022..607097) /locus_tag="CRE_20268" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98476.1" /db_xref="WormBase:CRE20268" /db_xref="WormBase:WBGene00082220" /translation="MGVDPAQITKFHRKNRISLVEVHKFSGKVIVLTKKQTIRTSHLE CIVRRNSLTKSTSGQQCEHTRDTSKNHCI" gene complement(<608226..>609662) /gene="Cre-ckb-3" /locus_tag="CRE_20371" /db_xref="WormBase:WBGene00061789" mRNA complement(join(<608226..608459,608509..608730, 608774..608939,608992..609102,609149..609251, 609298..609425,609479..609606,609648..>609662)) /gene="Cre-ckb-3" /locus_tag="CRE_20371" /product="CRE-CKB-3 protein" /db_xref="WormBase:WBGene00061789" CDS complement(join(608226..608459,608509..608730, 608774..608939,608992..609102,609149..609251, 609298..609425,609479..609606,609648..609662)) /gene="Cre-ckb-3" /locus_tag="CRE_20371" /note="contains similarity to Pfam domain PF01633 Choline/ethanolamine kinase; contains similarity to Interpro domain IPR002573 (Choline/ethanolamine kinase)" /codon_start=1 /product="CRE-CKB-3 protein" /protein_id="EFO98526.1" /db_xref="InterPro:IPR002573" /db_xref="PFAM:PF01633" /db_xref="WormBase:CRE20371" /db_xref="WormBase:WBGene00061789" /translation="MKALEKIFTENSLISDIVINTVIELGHDYLRGEWKNVKKFEVKV TKILGGQSNHMFHVTTSTSATQFLLRIHRHGQNQFFTDAVNFAIFSERGLGPKLFGFF EGGRMEEFIPSKTLNADDVLKPEISYSIGSVFPKYHSIDVPVSKNPKCFQIMRESLRE YSQLGGGVYTISSTNVTYSEHPIEVSYEDLNREIDLMERWSIEIFEETVVFCHNDLTC SNILQLNSSKEIMFIDWEYATYNYRGYDIAMHLSETAIVRMISPAGIKINEEFTDNPP NLRTFCEAYVDSANRMKNRNPSNRDLEIDNLMRECEFFWPTTHLFWACLLMKLGQLEC NKEINLDSQARDRLAVYFHLKPRTEKIYGQNMKK" gene complement(<610058..>611500) /gene="Cre-ckb-2" /locus_tag="CRE_20372" /db_xref="WormBase:WBGene00061790" mRNA complement(join(<610058..610291,610343..610567, 610618..610783,610827..610937,610982..611084, 611134..611261,611310..>611500)) /gene="Cre-ckb-2" /locus_tag="CRE_20372" /product="CRE-CKB-2 protein" /db_xref="WormBase:WBGene00061790" CDS complement(join(610058..610291,610343..610567, 610618..610783,610827..610937,610982..611084, 611134..611261,611310..611500)) /gene="Cre-ckb-2" /locus_tag="CRE_20372" /note="contains similarity to Pfam domain PF01633 Choline/ethanolamine kinase; contains similarity to Interpro domain IPR002573 (Choline/ethanolamine kinase)" /codon_start=1 /product="CRE-CKB-2 protein" /protein_id="EFO98658.1" /db_xref="InterPro:IPR002573" /db_xref="PFAM:PF01633" /db_xref="WormBase:CRE20372" /db_xref="WormBase:WBGene00061790" /translation="MTAIEVSPSFGHIFVNSRIFQKFFTENELDSEAVLHKVIDFGKE FLGGKWKNMDKSEVTITRITGGQSNHMFHITTSTAATPFLLRIHRQPQSQVFIDTVNF AIFFERGLGPKLYGFFEGGRMEEFLPSKTLDLDDVLKPEISQKIGALFPSYHAIKVPV SKNRRCIQLMRDWLQGYKSLGGGDYEIVPTTVTYSDHPKCVSIQDLTGEIDIFEKWAT ELYEETVVFSHNDLAAPNILELNSTKELVLIDWEFGTYNWRGFDLAMHLAETAIDFRV PFPPGIKIIEESTENPPNIRIFCEAYLDADNKLKNHTPVDRSSEIESLIQECLFFWPL THLFWALSAMKHALLKFENGVDLDVQARDRLAVYFHLRSRSQKTYEELSKK" gene complement(<612528..>613864) /locus_tag="CRE_20373" /db_xref="WormBase:WBGene00061791" mRNA complement(join(<612528..612779,612820..613041, 613085..613250,613307..613417,613464..613566, 613618..613745,613794..>613864)) /locus_tag="CRE_20373" /product="hypothetical protein" /db_xref="WormBase:CRE20373" /db_xref="WormBase:WBGene00061791" CDS complement(join(612528..612779,612820..613041, 613085..613250,613307..613417,613464..613566, 613618..613745,613794..613864)) /locus_tag="CRE_20373" /note="contains similarity to Pfam domain PF01633 Choline/ethanolamine kinase; contains similarity to Interpro domain IPR002573 (Choline/ethanolamine kinase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98532.1" /db_xref="InterPro:IPR002573" /db_xref="PFAM:PF01633" /db_xref="WormBase:CRE20373" /db_xref="WormBase:WBGene00061791" /translation="MGTDFIGGEWKNVEKSQVNVNRIIEGQSNYIFHVTSSTSSTPFL LRVHRQKDSHVFTDTVIFSVFSERGIGPKLYGFFEGGRIEEYLPSKTLDSESVLKPEI SIKIGSTFPKYHSMSVPLPKNRRCFQVMREILNDYQSLGGADFDLLPTHVSYSEHPES ISVKELHKEIDLFERWTTELFEDTVVFCHNDLTCANILELDSNNEIMFIDWEFASYNC RGFDLAMHLSETAIARGLKSKGAQISEELTDNPLNLFKFCKAYIDGDNKLKNRIPSNR STEILKLIQECQFFWPLTHLFWACFVMKIGLFNYIPGVDINIRARDRFAVYFHLKPRS QQIYEELSTKQTQKVV" gene complement(<614192..>614936) /gene="Cre-ckb-1" /locus_tag="CRE_20374" /db_xref="WormBase:WBGene00061792" mRNA complement(join(<614192..614425,614472..614696, 614745..>614936)) /gene="Cre-ckb-1" /locus_tag="CRE_20374" /product="CRE-CKB-1 protein" /db_xref="WormBase:WBGene00061792" CDS complement(join(614192..614425,614472..614696, 614745..614936)) /gene="Cre-ckb-1" /locus_tag="CRE_20374" /note="contains similarity to Pfam domain PF01633 Choline/ethanolamine kinase; contains similarity to Interpro domains IPR002573 (Choline/ethanolamine kinase), IPR013838 (Beta tubulin, autoregulation binding site)" /codon_start=1 /product="CRE-CKB-1 protein" /protein_id="EFO98535.1" /db_xref="InterPro:IPR002573" /db_xref="InterPro:IPR013838" /db_xref="PFAM:PF01633" /db_xref="WormBase:CRE20374" /db_xref="WormBase:WBGene00061792" /translation="MRDLKVLFRNLGGKDYEILPTLVTYSEHPKTVSMVDLHKEIDLM EKMSNEIFDDTIVFCHNDLACSNVLELNSNKEIVLIDWEFGTYNCRGFDLAMHLSETA IDFRDPTPPGIKISEKLTDDPPNIRGFCEAYVDADNKLKNRIPSDRSSQISKLIQECL FFWPITHLFWACFVMKLGLLKYNCGVDMDVQARDRFAIYYHLKSRTVKIYEELRKK" gene <615213..>617918 /locus_tag="CRE_20269" /db_xref="WormBase:WBGene00061793" mRNA join(<615213..615392,615437..615584,615632..615766, 615807..616047,616091..616171,616216..616318, 616401..616568,616616..616695,616741..616859, 616910..617058,617109..617249,617298..617438, 617491..617589,617637..>617918) /locus_tag="CRE_20269" /product="hypothetical protein" /db_xref="WormBase:CRE20269" /db_xref="WormBase:WBGene00061793" CDS join(615213..615392,615437..615584,615632..615766, 615807..616047,616091..616171,616216..616318, 616401..616568,616616..616695,616741..616859, 616910..617058,617109..617249,617298..617438, 617491..617589,617637..617918) /locus_tag="CRE_20269" /note="contains similarity to Pfam domain PF00209 Sodium:neurotransmitter symporter family; contains similarity to Interpro domain IPR000175 (Sodium:neurotransmitter symporter)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98590.1" /db_xref="InterPro:IPR000175" /db_xref="PFAM:PF00209" /db_xref="WormBase:CRE20269" /db_xref="WormBase:WBGene00061793" /translation="MVQDEIEFNIVYGYDRKKKRKRRTDSTESSSEHPDGVEKFDNEE DVAISPTGNPTVDPTKIETEELEQEIGSRNVSRPSTYRQLSLLLTCVTLLKNNLVFIE CFFNHGGIFFLIPYFIILFTLGVPMAIFELALAQFSSIPMNGMFVRMAPMLGGIPYLI LILRIVYTVYMAFEPRFLLYFYKSMTTVITGNNLWIRCQDYKGVRCYDPTMSCKINEI RLNGKCIKDLHIQQLSEQESYGLLTYFGFRESRLNSLIPSQFFKEINSLDMMDNILAA LIFLLIAGFITYKGHRFFASVAGFFVFLPILGMIPAVVLVYYDVGSRKKHFFKEIVKN NDISKIFEMSAWLNAARVSVKTVYIADGTLMALGSMADFGHNFVKDAFLLAASGAAYR LMLCFGILPILYVGNDILYPFAKKVYTQGELVQFHAIELFFSALPSYSIPGISSNVLF FSFGLLFGTINLAFVAYQVITFEILINSLHHLFPRLLYLKRRAVKVSIIMATVTFLLF LYMCGLPYKTNSVGYQTELELDDYVVGLVSTTVFVQLVAVAIVYGHKRLLVNVLTMLK SHPKTYKLVEKSRFFLYIMWTILLPISCLLSIMSVIVKKYQIYHWPPLVYAAISSFPL IYLTRKVRKLTRISDKLISFSQLIIFWIQKEDVGSLSQTHRWKPANEGHTREIEHDER ASGVLN" gene complement(<617969..>618646) /locus_tag="CRE_20375" /db_xref="WormBase:WBGene00082244" mRNA complement(join(<617969..618083,618129..618231, 618282..618409,618456..618583,618632..>618646)) /locus_tag="CRE_20375" /product="hypothetical protein" /db_xref="WormBase:CRE20375" /db_xref="WormBase:WBGene00082244" CDS complement(join(617969..618083,618129..618231, 618282..618409,618456..618583,618632..618646)) /locus_tag="CRE_20375" /note="contains similarity to Pfam domain PF01633 Choline/ethanolamine kinase; contains similarity to Interpro domain IPR002573 (Choline/ethanolamine kinase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98649.1" /db_xref="InterPro:IPR002573" /db_xref="PFAM:PF01633" /db_xref="WormBase:CRE20375" /db_xref="WormBase:WBGene00082244" /translation="MRPIEKLFTENEPDSDIILEKVIQLGSDFIGGEWKTVKKSQVNV SRILGGQSNHMFHVTSSNSATEYLLRIHRQGDSHVFTDTVNFAIFSERGLGPKLYGFF EGGRMEEFLPSKTLDSDRILEAEISRKVGASFPRYHAIDVPVSKERRCFQIMRESLKE YE" gene complement(<619415..>624999) /gene="Cre-mnp-1" /locus_tag="CRE_20376" /db_xref="WormBase:WBGene00061794" mRNA complement(join(<619415..619561,619610..619768, 619821..620162,620233..620475,621505..621615, 621663..622303,623665..623929,624583..>624999)) /gene="Cre-mnp-1" /locus_tag="CRE_20376" /product="CRE-MNP-1 protein" /db_xref="WormBase:WBGene00061794" CDS complement(join(619415..619561,619610..619768, 619821..620162,620233..620475,621505..621615, 621663..622303,623665..623929,624583..624999)) /gene="Cre-mnp-1" /locus_tag="CRE_20376" /note="contains similarity to Pfam domain PF01433 Peptidase family M1; contains similarity to Interpro domains IPR014782 (Peptidase M1, membrane alanine aminopeptidase, N-terminal), IPR001930 (Peptidase M1, membrane alanine aminopeptidase); coded for by the following C. remanei cDNAs: DR778025, DY525083" /codon_start=1 /product="CRE-MNP-1 protein" /protein_id="EFO98485.1" /db_xref="InterPro:IPR001930" /db_xref="InterPro:IPR014782" /db_xref="PFAM:PF01433" /db_xref="WormBase:CRE20376" /db_xref="WormBase:WBGene00061794" /translation="MVPPPASPSKKDKSSCLCFALIAIIIGIILCAGLMTWIFVLREN GDGPDVDWQNATEIPTTTTSKASSTTTELESTTTTSAEFKNDATSSTTTTQSATPETT TVSTTTTTEEVTTTTASEIVMPVDVASILKDKTKEFEIVEKCAQILVLHVSCTPSSSQ LTSDPSKFQPIHYTLNITIRDIRKPVLEGHMQLFASTKDQIQAISLHSVKIHNLENRD RVHVINCNTGETICVSRVHQVDEVIHLELAQSISSGVDLRIDIDGFISADSGPNVYKQ IPTAKWRVPQMVGSIFEPTSARHVFPSFDLHNQKATFNLCLNHGPSMTAISNSLINPN ISTSGISCFEKTVPLTAQQISFVAFERTNPLFYNTTTLDGAYLPEINMIFNLNAKNFQ QYEWIHSEVSKVMSLMSKWSGFSYPLPRLEIVVAPVMAGHSALGVITLPAQAIAYQKH TSTHETLIKEVIGQWMEGVVTTEHTCFEKALIAYLEWKINEELQIVKKTRKMEVSRIR PRNLNETADQLRVIRQIKPQSTSLCSPRFVEVFYTLDETYGQDTVVGMIRVIFDQFAF STATISDWASAAETSTGGRPEAGALIHEWYRPSSKISRPVLRAVVSSNSVDFHQLTED NWTVPLEISGSAGTQLAVISEKKQTVPFVSTDYVVVDASRKSHAFVVYDADTYLRLIR CFGDSRCPSKEIGGVFADLGAALLANILPKPDNQDVAKWKSVFKFMAQQNLVEGTAAC CVEHAIREMRKCSYWDIQDVCTKIDFNIVLAAVA" gene complement(621015..621134) /locus_tag="CRE_32434" /db_xref="WormBase:WBGene00186842" tRNA complement(join(621015..621061,621096..621134)) /locus_tag="CRE_32434" /product="tRNA-Leu" /db_xref="WormBase:CRE32434" /db_xref="WormBase:WBGene00186842" gene complement(<625474..>627938) /locus_tag="CRE_20377" /db_xref="WormBase:WBGene00061795" mRNA complement(join(<625474..625629,626083..626385, 626431..626552,626599..626795,626846..627073, 627121..627229,627277..627320,627371..627517, 627572..627607,627658..627773,627819..>627938)) /locus_tag="CRE_20377" /product="hypothetical protein" /db_xref="WormBase:CRE20377" /db_xref="WormBase:WBGene00061795" CDS complement(join(625474..625629,626083..626385, 626431..626552,626599..626795,626846..627073, 627121..627229,627277..627320,627371..627517, 627572..627607,627658..627773,627819..627938)) /locus_tag="CRE_20377" /note="contains similarity to Pfam domain PF00939 Sodium:sulfate symporter transmembrane region; contains similarity to Interpro domain IPR001898 (Sodium/sulphate symporter)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98587.1" /db_xref="InterPro:IPR001898" /db_xref="PFAM:PF00939" /db_xref="WormBase:CRE20377" /db_xref="WormBase:WBGene00061795" /translation="MSCYWVAEVVPLAVTSFIPMIALPFLGIVSIKQVAPKYFADTNI VFFNSLMLSLAVEECQLHKRIALKMLTYVGTRPHWLMAGFMIITSFISLWISDTACCA LMAPIAYALLEEIMIPKMRKAKNDELVEDKAFDDGTEEKRQLDTSKLSVRDRGICKCM MLLVAHASLIGGTGTINSTGPNLIFRDNIEKNFPNEDTGISYLSWMAFAIPPMLFYMF SSWFIVQLQFLGPRHLMGMFRKPTESEKQEEEVARRAVWKSYDQLGPMTWAEKSTLVI FLLAVLSWISSDPKVIPGWSDLFKKGYVTDSCSGLVAVFLLFIWPKNKPDLRLFRTDK NRASVRQEALIDWDCVRRRFPWSIILLLGAGFAISDAVKMSGLSTLIACSLNSTISSL PLFGMQIILSIVVVVMTEFSTNSATASIFIPISFTMAESVHAHPLYFSIPTAIGPSFS FMLPMATPANAIVYETKTIRMIDMVSCGILLNIFCIVITVINMNTWAYWLFNMGTYPD YALRHATNLTGNSTQCF" gene complement(<628637..>630759) /gene="Cre-hse-5" /locus_tag="CRE_20378" /db_xref="WormBase:WBGene00061796" mRNA complement(join(<628637..629391,629437..629710, 629757..630211,630259..630553,630601..>630759)) /gene="Cre-hse-5" /locus_tag="CRE_20378" /product="CRE-HSE-5 protein" /db_xref="WormBase:WBGene00061796" CDS complement(join(628637..629391,629437..629710, 629757..630211,630259..630553,630601..630759)) /gene="Cre-hse-5" /locus_tag="CRE_20378" /note="contains similarity to Pfam domain PF06662 D-glucuronyl C5-epimerase C-terminus; contains similarity to Interpro domain IPR010598 (D-glucuronyl C5-epimerase); coded for by the following C. remanei cDNAs: DY526083" /codon_start=1 /product="CRE-HSE-5 protein" /protein_id="EFO98609.1" /db_xref="InterPro:IPR010598" /db_xref="PFAM:PF06662" /db_xref="WormBase:CRE20378" /db_xref="WormBase:WBGene00061796" /translation="MKCLRWRSNRHRFYMFFACASLFLLCKHYSSPNEKIDEEDEYLN AVDEHEKEKKVECEPPGAVESKCTVDNGKAMRCWKDEEEVYFPTSYLKKRFDMTGKLG KDGSTFELYTSYAKMRTPESTYEPLGPFGHFATYSVETRDRVRCISAKTNVPMSTQWD PTPYYYPIQIAQYGLQHYSRIKIGLFTNSSLKIQYFSLDSNSNKTEDKREVLVGVKSN EWKGAAGMHETTERLFFNDEEKGKVVNISAGCLLIFIIKIIDDSFSDALANAGAYVYL DKSPDLHVVSFDWKPYDGNASFTVLAKMKQDDLLVLINYVFSEGNGKCVWQEEERSYD DDTIVQKPKKDGQVSYSYSYTGSSQYGEWSNVTRDILVDVSRALSSGDNRKKDDNVIL HPGDIRLVSLGFRGQLTVRQQINQRVEQHSHAFRSAADWMIQNQDKKGGWAVPVERSI ADRKLVLEPGWHSAMAQGHGISVLTRAYKHFNDTKYLLSAMKALELFKTNSSEGGVRA EFFGNVWYEEYPTTPGSFVLNGFLYSLIGLYDLSKLEVPVAEIDENIRMKIKEAQQLY SAGIRSLKQLLPLYDTGSGTIYDLRHVALGTAPNLARWDYHAVHVYLLKWISGIENDE FLSKTADRWIGYAYGKRAKHN" gene complement(<630995..>632326) /locus_tag="CRE_20379" /db_xref="WormBase:WBGene00061797" mRNA complement(join(<630995..631079,631126..631212, 631261..631606,631653..631817,631961..632138, 632186..>632326)) /locus_tag="CRE_20379" /product="hypothetical protein" /db_xref="WormBase:CRE20379" /db_xref="WormBase:WBGene00061797" CDS complement(join(630995..631079,631126..631212, 631261..631606,631653..631817,631961..632138, 632186..632326)) /locus_tag="CRE_20379" /note="contains similarity to Pfam domain PF04072 Leucine carboxyl methyltransferase; contains similarity to Interpro domains IPR016651 (Leucine carboxyl methyltransferase, LCTM1 1), IPR007213 (Leucine carboxyl methyltransferase); coded for by the following C. remanei cDNAs: DT933243, DT936760" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98551.1" /db_xref="InterPro:IPR007213" /db_xref="InterPro:IPR016651" /db_xref="PFAM:PF04072" /db_xref="WormBase:CRE20379" /db_xref="WormBase:WBGene00061797" /translation="MDSEALSSDSHVAAVISTRRRSNSVSDDYSVQRTNDDATQCKFF AIQKGYWKDEFISRFANSSANVAEARRFPEISMGYWARTAAIEKYVREFLTEFNGKAQ VISFGCGFDTLFWRLVSSGSNLVKYVEVDFSSVTSKKIRHILKPVGSGSIDLKKSFES EAVVSHHSDLHAGNYHLVGADLRQSNELDQKLETCQLDYDIPTIFIAECVLVYMSANA SSSLLKQIVSKFRQPAFVNYEQFRTSDAFTKVMEQNLGERGIQLHGLEMCESSEKQEE RFRNAGFKTIKVMDMNQIFNNFLDQNEVGRIRTIEMLDEMELLEQLLTHYCVVFARI" gene <632562..>633326 /locus_tag="CRE_20270" /db_xref="WormBase:WBGene00061798" mRNA join(<632562..632607,632724..633037,633128..633232, 633279..>633326) /locus_tag="CRE_20270" /product="hypothetical protein" /db_xref="WormBase:CRE20270" /db_xref="WormBase:WBGene00061798" CDS join(632562..632607,632724..633037,633128..633232, 633279..633326) /locus_tag="CRE_20270" /note="contains similarity to Oryza sativa subsp japonica Expressed protein (Os03g0166000 protein).; TR:Q10RA9" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98500.1" /db_xref="WormBase:CRE20270" /db_xref="WormBase:WBGene00061798" /translation="MSDGYQGGNQWLPRGENKWRPYGRGRGGGGGWRGNDNRGGYRGG YNQQVNDGGWGNYGGNQNQRRGGEGGGYQGNRGNRGNYYGGNQNNFNNGNRGRGRGGQ GFQRDNRGRGGKGGHSNHGPIDSSKCLIPAMMGNPWRKLEQEYEEEYGLTITEKMEPA NTATKPTEST" gene complement(<634770..>640613) /gene="Cre-cdtl-7" /locus_tag="CRE_20380" /db_xref="WormBase:WBGene00061799" mRNA complement(join(<634770..634972,635104..635215, 635261..635411,635459..635571,635616..635853, 635899..635972,636017..636497,636543..636760, 636806..636916,637456..637591,639975..640184, 640408..>640613)) /gene="Cre-cdtl-7" /locus_tag="CRE_20380" /product="CRE-CDTL-7 protein" /db_xref="WormBase:WBGene00061799" CDS complement(join(634770..634972,635104..635215, 635261..635411,635459..635571,635616..635853, 635899..635972,636017..636497,636543..636760, 636806..636916,637456..637591,639975..640184, 640408..640613)) /gene="Cre-cdtl-7" /locus_tag="CRE_20380" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="CRE-CDTL-7 protein" /protein_id="EFO98637.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE20380" /db_xref="WormBase:WBGene00061799" /translation="MEISPGSSSHERDKKGSHGHREHRERTRSHSGSPSRFYGKEKRG GSRQGNRGRDRESRDSVSPQYKQQRGWSSPNNFRKGGGGGRDRSRNDSSRKKSKERRR RDKRSRSRSRHRSPRRSGSSKKSKKRNSSGGSSSSDLMDTSLIGEIKKKHGADIGSSK NKKKRSTRRKRNRNSSSSSTSSGEVPEPIILSSNGMNLNALPPPTTFNPAFPPMFSQP PPPPPPGTFMTPPPRPPPPPFGMPPPMIESHFCATASVSISSIPPPPPQILDGASSSR RDALPLPPESRRIATRPVIITRRGVTTNRPSDSDSWYKTNLTHYEMLDQIGEGTYGQV YKAVNKITGTFHFILYPRNSKFTGEQVALKRVRLENEKEGFPITAIREIKILRQLHHK NIVRLIDIVIDDISMDELKRTRANFYLVFEYVDHDLIGLLESKELVDFNKDQICSLFK QLLEGLAYIHNTGFLHRDIKCSNILVNNKGELKIADLGLARLWQKESRLYTNRVITLW YRPPELLLGDERYGPAIDVWSAGCMLGELFTRKPLFNGSNEVVQMELISKVCGSPNPD SWPELTELQGWVTFKQRRSFPRKIREEFEHIMPREAVDLLDKMLTLNPERRISAKDAL LHPWIRNLEHTNVQQLQLPQHQDCHEMWSKKQKRSARLGRQAEGSSGSGHSMRATSHP RAAPPTVATATSNASSSKTNGTSNNHQHASSVPPVPAVHQVQLPHPSASSTHNNHHPV HQQYQPVFFK" gene <644820..>647249 /gene="Cre-gly-6" /locus_tag="CRE_20271" /db_xref="WormBase:WBGene00061800" mRNA join(<644820..644945,644997..645062,645110..645377, 645421..645564,645611..646110,646155..646766, 646839..647159,647205..>647249) /gene="Cre-gly-6" /locus_tag="CRE_20271" /product="CRE-GLY-6 protein" /db_xref="WormBase:WBGene00061800" CDS join(644820..644945,644997..645062,645110..645377, 645421..645564,645611..646110,646155..646766, 646839..647159,647205..647249) /gene="Cre-gly-6" /locus_tag="CRE_20271" /note="contains similarity to Pfam domains PF00652 (Ricin-type beta-trefoil lectin domain), PF00535 (Glycosyl transferase family 2); contains similarity to Interpro domains IPR000772 (Ricin B lectin), IPR001173 (Glycosyl transferase, family 2); coded for by the following C. remanei cDNAs: DY527392" /codon_start=1 /product="CRE-GLY-6 protein" /protein_id="EFO98653.1" /db_xref="InterPro:IPR000772" /db_xref="InterPro:IPR001173" /db_xref="PFAM:PF00535" /db_xref="PFAM:PF00652" /db_xref="WormBase:CRE20271" /db_xref="WormBase:WBGene00061800" /translation="MIASLLRSRRRSKRVVAYAVFLFGFVAIWGSFSLALVFLGDVYF GDEPILAQKASKQVTKSNYHVVVGHYNGNLPEDKKRNLTSEELNANLYSPREEWGEGG SGVTHLTPEQQKLADSTFAVNQFNLFVSDGISVRRSLPEIRKPSCRNITYPEDLPTTS VIIVYHNEAYSTLLRTVWSVIDRSPKHLLREILLVDDFSDRDFLRYPKLDESLKPLPT DIKIIRSNQRVGLIRARMMGAQEAQGDVLTFLDSHCECTKGWLEPLLTRIKLNRKAVP CPVIDIINDNTFQYQKGIEMFRGGFNWNLQFRWYGMPTEMAKQHLLDPTGPIESPTMA GGLFSIDRNYFEELGEYDPGMDIWGGENLEMSFRIWQCGGRVEILPCSHVGHVFRKSS PHDFPGKSSGKVLNANLLRVAEVWMDEWKYYFYKIAPVAFRMRESIDVSERVELRKKL NCKSFKWYLQNIFKDHFLPTPLDRFGRVSVICLMTWSPCLHVQMTSSTNSSVCLAWTL RSSGIKTPSTVDCLDIFHKTQVHFLSSFQMSNSNYCTSFRPGDTGPKNHRLLGSPCTM GFDLWQLWLYTGDHRIRTDEHLCLSVVQLLHTSSDWKIQLKECAGFDTEYWDFKPKVF CLISIRSLLFFELQIGRFKNRKTGLCLTSPDIFDPSKDEFNPPIIQKCRNSDERQKWT ITEMSWLPEHR" gene complement(<648305..>648780) /locus_tag="CRE_20381" /db_xref="WormBase:WBGene00082222" mRNA complement(join(<648305..648362,648415..648480, 648558..648628,648673..>648780)) /locus_tag="CRE_20381" /product="hypothetical protein" /db_xref="WormBase:CRE20381" /db_xref="WormBase:WBGene00082222" CDS complement(join(648305..648362,648415..648480, 648558..648628,648673..648780)) /locus_tag="CRE_20381" /note="contains similarity to Pfam domain PF06678 Protein of unknown function (DUF1179); contains similarity to Interpro domain IPR009564 (Protein of unknown function DUF1179)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98487.1" /db_xref="InterPro:IPR009564" /db_xref="PFAM:PF06678" /db_xref="WormBase:CRE20381" /db_xref="WormBase:WBGene00082222" /translation="MTSAFTVSKFQIITLTLFSFTFVQCKQKKKFQSDNKAQLVDPNT PESPKSVKDVHRPVSQVPPTLMPIESPTKNKVNEDTLANVASIKPDFSVGGPPVPV" gene complement(<649239..>650628) /gene="Cre-tag-131" /locus_tag="CRE_20382" /db_xref="WormBase:WBGene00061802" mRNA complement(join(<649239..649419,649470..649737, 649876..650060,650110..650201,650254..650436, 650557..>650628)) /gene="Cre-tag-131" /locus_tag="CRE_20382" /product="CRE-TAG-131 protein" /db_xref="WormBase:WBGene00061802" CDS complement(join(649239..649419,649470..649737, 649876..650060,650110..650201,650254..650436, 650557..650628)) /gene="Cre-tag-131" /locus_tag="CRE_20382" /note="contains similarity to Pfam domain PF00173 Cytochrome b5-like Heme/Steroid binding domain; contains similarity to Interpro domain IPR001199 (Cytochrome b5); coded for by the following C. remanei cDNAs: DR777865, DY527573" /codon_start=1 /product="CRE-TAG-131 protein" /protein_id="EFO98501.1" /db_xref="InterPro:IPR001199" /db_xref="PFAM:PF00173" /db_xref="WormBase:CRE20382" /db_xref="WormBase:WBGene00061802" /translation="MERNRRRKDDAGVMTKTLAGIAALTFLVSFICSSNGITFNHVVS TIEVILEESDYYKLTKEWMASSIDATWQEVSIPSRKAEHIQAINPEVDVAAGGKHVFT SEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFT ENGLVASTHGLSHDELLSIRDWVSFYEKEYPLVGVVADLYYDSDGQPTAELTDVLARV EKANEYRKAQAVEIEVFPPCNSEYNQNGGRVWCSTKSGGVERQWAGVPRKLIEPTTKK FRCACVKNFGPGVSGAEEVKAANNRGDLDHPDLELFPDCSPTSNSCKISS" gene complement(<651351..>653196) /gene="Cre-dcn-1" /locus_tag="CRE_20383" /db_xref="WormBase:WBGene00061803" mRNA complement(join(<651351..651764,652004..652309, 652350..652508,652883..652969,653056..>653196)) /gene="Cre-dcn-1" /locus_tag="CRE_20383" /product="CRE-DCN-1 protein" /db_xref="WormBase:WBGene00061803" CDS complement(join(651351..651764,652004..652309, 652350..652508,652883..652969,653056..653196)) /gene="Cre-dcn-1" /locus_tag="CRE_20383" /note="contains similarity to Pfam domain PF03556 Domain of unknown function (DUF298); contains similarity to Interpro domains IPR005176 (Protein of unknown function DUF298), IPR014764 (Defective in cullin neddylation); coded for by the following C. remanei cDNAs: DT934900" /codon_start=1 /product="CRE-DCN-1 protein" /protein_id="EFO98588.1" /db_xref="InterPro:IPR005176" /db_xref="InterPro:IPR014764" /db_xref="PFAM:PF03556" /db_xref="WormBase:CRE20383" /db_xref="WormBase:WBGene00061803" /translation="MSTRLKADQKSKVGKRKQDSEEMSDVEFGVKKSRVPQNYDNSVV GGNHLSCASSSSQGLAQSTNLSKMSPKNYETILRQFVQWTQAAEPVAVNFLAKANWNI EYAMTLYFDNPNLFSGSAAQPSVDVSKNERFFNQYIHTEDGLGDKRIGPNGVQKLLGE LGYSPTDRRVLILAWKCNAQTQCEFSLKEWLDGMTTLHADSVQTLRQRIDSLDAELHS DKSKVSKFFKANYFRELYLFAFSYGKAAASRSLDLETSILYWDVLFGNNRSTLMSQWI DFLREQERQAVTRLALDVGQANAAKIKHVWITRDTWNLFWDFIVLSRADLSDYDDEGA WPVLIDQFVDHCRSSLNYPTPQPAGQPMEQRSYY" gene <653685..>659339 /gene="Cre-evl-14" /locus_tag="CRE_20272" /db_xref="WormBase:WBGene00061804" mRNA join(<653685..653768,653818..654030,654077..654169, 654216..654824,654875..654993,655040..655137, 655184..655329,655372..655715,655767..656046, 656091..656204,656248..656557,656601..656716, 656767..657161,657211..657396,657442..657774, 657822..657972,658027..658449,658478..658840, 658887..659234,659283..>659339) /gene="Cre-evl-14" /locus_tag="CRE_20272" /product="CRE-EVL-14 protein" /db_xref="WormBase:WBGene00061804" CDS join(653685..653768,653818..654030,654077..654169, 654216..654824,654875..654993,655040..655137, 655184..655329,655372..655715,655767..656046, 656091..656204,656248..656557,656601..656716, 656767..657161,657211..657396,657442..657774, 657822..657972,658027..658449,658478..658840, 658887..659234,659283..659339) /gene="Cre-evl-14" /locus_tag="CRE_20272" /note="contains similarity to Pfam domain PF02985 HEAT repeat; contains similarity to Interpro domain IPR000357 (HEAT); coded for by the following C. remanei cDNAs: DR781792, DT937463" /codon_start=1 /product="CRE-EVL-14 protein" /protein_id="EFO98543.1" /db_xref="InterPro:IPR000357" /db_xref="PFAM:PF02985" /db_xref="WormBase:CRE20272" /db_xref="WormBase:WBGene00061804" /translation="MSSDVDYPQGCLPIENSTNVSQQIERLRKLAACLYDCKENKDEE VKSPTRFARLFQHLSQSCFLDNSNPDFRLHLSLCLAHILRVFLPEVPTPTAIELKNVY IHIFRTLRGLGEITTDSPKFKHFFNLVEAIKVILHPISEMQDFDEKESIPVVRTLFRE ILGLTCGKGWNKNVKDNKKEGSSDEEPIEENKEDEDEEDKNIVEKVREALVTIGRKAL GELDYVPAEVLDVIFYHIASPQRTNFPEARDLAESIIYSCMQIDAEPTTEEKTNPLTA SIRNAMTTAAKEGKLPDEYEMTGSDSRSKFFDILRVLHFISTKLVSGATEELNFWLQS DNAQYRLEAVKIVGYCTRDRHCQFGMDSSDATWTAFLNAAKDQESSVRKEFVTQSKSV LVSNHSHLRGQIINCLLRLSKDPQDEVRLNVVQAVAEVSKSKLEAISDKLLKLCAERM KDKKPNVRNESIKRMMDLYHHVMTSKPQKFYSKDSLINHQDTDDTTLPYTESDKECVR FIPNAVFNVYRLTQRTPAYLDSRLIIERYVQKNFIPYEIDPKERMKIMADMYRNLDDI GCLMFGDIVNRSSQLRRAIMGILSGLGKYHSDSPSEFSAQMKDRIRRIIQIFPDASNL EKAMMTFINTLSENSNVFDLVKKMMGDCYISKENADDTLTVRRSVDAKLKSKLQQTSF RQFLDRVIPLSFDSPAAKELIHLVSETVCAKIDLKNWAQGCFERDLGLLKLFSEYFAH VFADKDIVEEIRSKILTTDEPRAVEVALHALSKIFQNSNFKTRMEDESIRREKWFLSI SKNLKELVTRSDPELRRSCKLATRLLAGLLGKDKAVEFFDGEFDTLLYRLDLETPGCA NSFQVLAEIFRTDIPHYFSRIMEILESDKIGPLIMTSPQHDEEDPIEFNDLIHFEKQP SPKYTSAKVYAAKFAAKVLSSCSLVIDPVDKQDMERVGQKFIDLSSEIIDKNGDLGGR QCDLEKARLRSTAAACLLKLATIITWRTKMHTGLYKNMSYMITDEAYCVRLYYALHIK KGLGRRLPIEFAACYGLINLGLVEEEGENKLEGFKTICMNQAHQSFVERNDEKANILN LQGAQRTMFCAETVVAYVVWLLANYGKLEKLEGNADKNDSEDTLALKASNVNLLAELQ ESLWLVIDMLKIAKCNMQKVWKYFEKLKTCGDKSMRSDGRVSTVQLREHNKKIWAICD LGISMMLYRAKLQMEDQESNDTGFNLQFFYVCNVKDKADPSNVYAPDVLINSEKQRNG RLPKPGHAYQVTDITSEFSPPPQSNETNVSNSSKNASKRGAANTSTTKSKKVGGKKNR RSGASKASDDDEDDSVIKLGFSMKKFQSPPASKKTRSKRGVYDPPEEEDDEMEIIPLP KRRGAPPVSFVPSSSSSNGNTSRNGTSSPNKSNSRKAKGRQNSKRETEIESSSDEEET EKANGVSLDNLVISPILNESSGRARRSARTIAATATITASTPLVPPKAKKVKRKRSDF VPEEGDMDYEDPPITSSPSPKKRTSARIVPSTPTTKKEASATAAKMSDSSKFSKKSPA KTNGTSPKKNKYGLPMEEEEEEQTASTSRKSVRTRARLSKK" gene <663556..>667255 /gene="Cre-glr-1" /locus_tag="CRE_20273" /db_xref="WormBase:WBGene00061805" mRNA join(<663556..663658,663708..663804,663939..664258, 664306..664562,664612..664891,664937..665040, 665078..665482,665536..665790,665862..666025, 666070..666268,666313..666502,666556..666887, 666934..667038,667169..>667255) /gene="Cre-glr-1" /locus_tag="CRE_20273" /product="CRE-GLR-1 protein" /db_xref="WormBase:WBGene00061805" CDS join(663556..663658,663708..663804,663939..664258, 664306..664562,664612..664891,664937..665040, 665078..665482,665536..665790,665862..666025, 666070..666268,666313..666502,666556..666887, 666934..667038,667169..667255) /gene="Cre-glr-1" /locus_tag="CRE_20273" /note="contains similarity to Pfam domain PF00060 Ligand-gated ion channel; contains similarity to Interpro domains IPR015683 (Glutamate receptor-related), IPR001320 (Ionotropic glutamate receptor), IPR001508 (NMDA receptor)" /codon_start=1 /product="CRE-GLR-1 protein" /protein_id="EFO98496.1" /db_xref="InterPro:IPR001320" /db_xref="InterPro:IPR001508" /db_xref="InterPro:IPR015683" /db_xref="PFAM:PF00060" /db_xref="WormBase:CRE20273" /db_xref="WormBase:WBGene00061805" /translation="MVSSSRKSWRNMLTVLFSLLNITRVEPYPSHIIIKSFGNNEEVS RVALKAMEYTSDHINSRDDVPFKLAFDHRVVEEGAAVSWNMVNAVCDELKEGAMTLLS SVDGKGIEGIRGVSDALEMPLISLTAPTNDEQQQFGNLFEVSVRPPISELLADFIVHK GWSEVLVMIDPLHASLHLPSLWRHLRTRTNTSVKASMFDLPADETQFETYLMQFNMMR NNETNRILIDCASPKRLKRLLINIRSAQFNQANYHYVLANYDFLPYDQEMFQNGNINI SGFNIINKDGREYWSLKKHLKTSSSLGGGDDVSVEAAVGHDAMLVTWHGFAKCLQAND SLFHGTFRHRRFFNRGFPGIYCDPLSDRSHPNRPFSSFEHGKTIGVAFRNVRIMQIGA KEGTLTGNIEFDRFGNRKNFDVSIVDLVSNTKATFNSKEILAWRQGVGFFSNRTVAQH SRKSQSDHKDNQVIVLTNLVAPFVMIKRECVEMANLTECQGNNKFEGFCIDLLKLLAD KIEGFNYIIKLGTKAGSKQPDGSWDGMIGELLNGNAHAVVASLTINQERERVVDFSKP FMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWR VEETSRGGFTISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVS SYTANLAAFLTLEKMQAPIESVEDLAKQTKIKYGIQGGGSTASFFKYSSVQIYQRMWR YMESQVPPVFVASYAEGIERVRSHKGRYAFLLEATANEYENTRKPCDTMKVGANLNSI GYGIATPFGSDWKDHINLAILALQERGELKKLENKWWYDRGQCDAGITVDGSSASLNL SKVAGIFYILMGGMVISMLAALGEFLYRSRIEARKSNSNSMVANFAKNLKSALSSQLR LSIEGGAVAQPGSQSHNAIRRQQVAAFLPANEKEAFNNVDRPPSTLYNTAV" gene complement(<668054..>669840) /locus_tag="CRE_20384" /db_xref="WormBase:WBGene00061806" mRNA complement(join(<668054..668150,668412..668527, 668594..668926,669003..669235,669268..669354, 669404..669538,669588..669711,669760..>669840)) /locus_tag="CRE_20384" /product="hypothetical protein" /db_xref="WormBase:CRE20384" /db_xref="WormBase:WBGene00061806" CDS complement(join(668054..668150,668412..668527, 668594..668926,669003..669235,669268..669354, 669404..669538,669588..669711,669760..669840)) /locus_tag="CRE_20384" /note="contains similarity to Drosophila melanogaster Flybase gene name is mol-PD; FLYBASE:CG4482" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98474.1" /db_xref="WormBase:CRE20384" /db_xref="WormBase:WBGene00061806" /translation="MLWFGGNPSPSDYPNAAIPNFNMHAFVIFSVFLIPFIAYLLILP GVRRKRVITTVTYVLMLVVGASLIASLILPCWASGSQMIYTQFRGHSNERILAKIGVE IGLQKVNVTLKFERLLSSNDVLPGSDMTELYYNEGFDISGTFLSVSSMAEALHHGLEN GLPYPMLSVLEYFSLNQDAFDWGRHYRVAGHYTHAAVWFAFACWCLSVVLLFLLPHNA YKSILATGISCLIACLVYLLLSPCELRIAFTGENFERVDLTATFSFCFYLIFSMGILC VLCGLGLGICEHWRIYTLSTFLDASLDEHVGPKWKKLPTGGPGLQGVQIGTFGTNTTN SSRDKSDLNSDKTTGSSGFQSRTSTCQSSASSASLRSQTSIETVHDEAELERTHVHFL QDPCSSSST" gene complement(<683991..>685680) /gene="Cre-acdh-6" /locus_tag="CRE_20385" /db_xref="WormBase:WBGene00061807" mRNA complement(join(<683991..684140,684186..684539, 684789..685141,685187..685321,685371..>685680)) /gene="Cre-acdh-6" /locus_tag="CRE_20385" /product="CRE-ACDH-6 protein" /db_xref="WormBase:WBGene00061807" CDS complement(join(683991..684140,684186..684539, 684789..685141,685187..685321,685371..685680)) /gene="Cre-acdh-6" /locus_tag="CRE_20385" /note="contains similarity to Pfam domains PF02770 (Acyl-CoA dehydrogenase, middle domain), PF00441 (Acyl-CoA dehydrogenase, C-terminal domain), PF02771 (Acyl-CoA dehydrogenase, N-terminal domain); contains similarity to Interpro domains IPR006090 (Acyl-CoA oxidase/dehydrogenase, type 1), IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal), IPR006091 (Acyl-CoA dehydrogenase/oxidase, central region), IPR006089 (Acyl-CoA dehydrogenase, conserved site), IPR013764 (Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal), IPR006092 (Acyl-CoA dehydrogenase, N-terminal)" /codon_start=1 /product="CRE-ACDH-6 protein" /protein_id="EFO98655.1" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013764" /db_xref="InterPro:IPR013786" /db_xref="PFAM:PF00441" /db_xref="PFAM:PF02770" /db_xref="PFAM:PF02771" /db_xref="WormBase:CRE20385" /db_xref="WormBase:WBGene00061807" /translation="MTISVILLKNKPIVDHQLSTSILSKMALLARKAPALLPAPTTST MKHMIYDETHFAMQNSLSKMITEKINPNVAQWEKSGRYPAHYIFKMMGQLGVFAVNKP EEFGGTGRDFSMSIAVAEQIGSIDCGSIPMSVMVQTEMSTPALAQFGSDFLRNRFLRP SLNGDLVSSIAVSEPHAGSDVSAIRTHARRFGTDLIINGSKMWITNGDQADWACVLVN TSNEKNLHKNKSLVCIPLDSPGVHRSSPLDKLGMRCSDTVQLFFEDVRVPASFIIGEE GRGFSYQMKQFNDERLVTVAVGLLPLQNCINKTIEYARERSIFGKTLLDQQYVQFRLA ELEAELEATRSLLYRTVMARCQDEDVSMLTAMSKLKIGRLARKVTDSCLQIWGGAGYL NDNGISRAFRDFRIFSIGAGCDEVMMQIIHKTQSKRQQKTI" gene complement(<688126..>689616) /locus_tag="CRE_20386" /db_xref="WormBase:WBGene00061808" mRNA complement(join(<688126..688342,688450..688626, 688676..688947,688989..689125,689577..>689616)) /locus_tag="CRE_20386" /product="hypothetical protein" /db_xref="WormBase:CRE20386" /db_xref="WormBase:WBGene00061808" CDS complement(join(688126..688342,688450..688626, 688676..688947,688989..689125,689577..689616)) /locus_tag="CRE_20386" /note="contains similarity to Pfam domain PF03227 Gamma interferon inducible lysosomal thiol reductase (GILT); contains similarity to Interpro domain IPR004911 (Gamma interferon inducible lysosomal thiol reductase GILT)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98620.1" /db_xref="InterPro:IPR004911" /db_xref="PFAM:PF03227" /db_xref="WormBase:CRE20386" /db_xref="WormBase:WBGene00061808" /translation="MKKLTREAQEPLIPHIRPSTRNKIRKYIYGGVFFLSIFILYRAL NNNESGKKGIGRNGDFMEYDPRKNGPKLEDPVVNMIKLDIYMEAQCPDTSRFVFDVFN FKRHHFCSRFFRQQLKKAWDILGNLNRIELNVIPFGKARCTEKGNDFECQCQHGPTEC EINQLMNCVIDRFGFPHRYLPAVLCMQGKYSLDEAMTCVTQNFPAEYNRMRECAGGQR GRRLLALSGQKTASITPAIDFIPWIVINGARNSDALYDLTQNACEAMQPMPSACKEYL RSLQ" gene complement(<691148..>692336) /locus_tag="CRE_20387" /db_xref="WormBase:WBGene00061809" mRNA complement(join(<691148..691404,691475..691936, 692294..>692336)) /locus_tag="CRE_20387" /product="hypothetical protein" /db_xref="WormBase:CRE20387" /db_xref="WormBase:WBGene00061809" CDS complement(join(691148..691404,691475..691936, 692294..692336)) /locus_tag="CRE_20387" /note="contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain), PF02798 (Glutathione S-transferase, N-terminal domain); contains similarity to Interpro domains IPR005442 (Glutathione S-transferase, omega-class), IPR012335 (Thioredoxin fold), IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR010987 (Glutathione S-transferase, C-terminal-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98529.1" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR005442" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR012335" /db_xref="PFAM:PF00043" /db_xref="PFAM:PF02798" /db_xref="WormBase:CRE20387" /db_xref="WormBase:WBGene00061809" /translation="MSVLAGVNTKVLKNGDAAPSPPAAGTFRIYNMRFCPWAQRALIY ASVKHIPSEVINIHLKEKPDWYFSKHYKGQVPALEHDEGKKHVIESAHIPEYLDDLFP ETRILPSDPYEKVKQKLLLERLGAVAPAFYGAVQAASNPAVREEKYAELVKAFEQAEN LLTSDFYSGNSKPGFVDYLIFPNIQRSFWLSHILKDFPLSSTSFPGPNYPKLTKWYKT LESIPEVAAASQPIEAGVGFFKDYMTGTPNYDYGL" gene <698139..>699564 /locus_tag="CRE_20274" /db_xref="WormBase:WBGene00061810" mRNA join(<698139..698274,698323..698627,698670..698831, 698880..699176,699391..>699564) /locus_tag="CRE_20274" /product="hypothetical protein" /db_xref="WormBase:CRE20274" /db_xref="WormBase:WBGene00061810" CDS join(698139..698274,698323..698627,698670..698831, 698880..699176,699391..699564) /locus_tag="CRE_20274" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98601.1" /db_xref="WormBase:CRE20274" /db_xref="WormBase:WBGene00061810" /translation="MIPPPPNTSSLTCTPEEESENYKAVENMFATLYFFLPFSALGAL IGNVIYLIVVTVGIRKGKLPLKRYALTINRTCADIFTIIVGTYFYMKQKMDRCDSHIC LPVETDVSRYVLQVVFVLNYWCVSLSYSGIAVLTNYAVRAPLQYKVNLTSMKVAKYIL IGWLALLFCFLLCVVLVHRGELDYNSNSVIHLFLDDFDSDEYIGEWLVDLCNHIKSHP GTRSLIVTILPPIFFYLISVVSYVFIIHLLFSRRKVSSYHRHWGSMLRLGIHLILFAG TCALTGTAYLGSFSIGDFCEQHQTNEPMCLEAVVSYMWNTAAALIGWICRMVIDATVD TVDIACFFIIYSKVQFHLFSDFS" gene complement(<700519..>704529) /gene="Cre-trp-1" /locus_tag="CRE_20388" /db_xref="WormBase:WBGene00061811" mRNA complement(join(<700519..700666,700718..700848, 700898..701063,701180..701404,701556..701758, 701806..702375,702422..702847,702895..703032, 703081..703230,703368..703755,703818..704031, 704077..704236,704281..704338,704393..>704529)) /gene="Cre-trp-1" /locus_tag="CRE_20388" /product="CRE-TRP-1 protein" /db_xref="WormBase:WBGene00061811" CDS complement(join(700519..700666,700718..700848, 700898..701063,701180..701404,701556..701758, 701806..702375,702422..702847,702895..703032, 703081..703230,703368..703755,703818..704031, 704077..704236,704281..704338,704393..704529)) /gene="Cre-trp-1" /locus_tag="CRE_20388" /note="contains similarity to Pfam domains PF08344 (Transient receptor ion channel II), PF00520 (Ion transport protein), PF00023 (Ankyrin repeat) (2)contains similarity to Interpro domains IPR002153 (Transient receptor potential protein), IPR005821 (Ion transport), IPR004729 (Transient receptor potential channel), IPR000102 (Neuraxin/MAP1B repeat), IPR002110 (Ankyrin), IPR013555 (Transient receptor potential II)" /codon_start=1 /product="CRE-TRP-1 protein" /protein_id="EFO98458.1" /db_xref="InterPro:IPR000102" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR002153" /db_xref="InterPro:IPR004729" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR013555" /db_xref="PFAM:PF00023" /db_xref="PFAM:PF00520" /db_xref="PFAM:PF08344" /db_xref="WormBase:CRE20388" /db_xref="WormBase:WBGene00061811" /translation="MLSAQGRRFSRCAPSPRPRNRNLQNMPPPAAVHIRTNDMISPEE RRFLEAAELGNKPTLQEFLDYHDGERRLNVNCLDSMGRTALEIAVDNENMEVVELLLQ QPDIRIGNALLCAIREGVYRLVEVLVNHPNITKEMLGEGWTQALDPSEAASAEYSSDI SPVILAAQLNQFEILQMLIRKDAKIDPPHNHMCICETCDRERLYDSLQYSLKRINTYR ALASPAYMSLTSSDPINEAFKLSWDLQKLAFEEHEFKETYLQLSEQCKQYSCDLLSQC RSSEEVIAILNKDGNNKEENIDVWESKLSLSRLKLAIKYEQKAFVSHPHCQQLLTSIW YEGIPYRQQSGTWASFFLYAFLLIFWPIFCLLYILMPRSRLGKLVRSPFMKFFYYSIS FATFLGLLTWATFEDYRYEKGERGGVTRASDRGPPATWVESLVFTWVIGMLWSEIKQL WEEGFKRYMRQWWNWLDFLMICLYLCTISIRYQFTQSFLILKIENFRLSAYYIFTYRE DPYRYTVRTHWSSEEPMLVAEALFAVGNVFSFARIIYLFQTNPYLGPLQISLGCMLVD VAKFCFIFVLIISSFSIGLAQLYWYYDPNTDVCLPGATCKQSSNVFSSIADSYLTLLW SLFSITKPEDTDVIENHKITQWVGQGMFIMYHCTSIIVLLNMLIAMMSHSFQIINDHA DLEWKFHRTKLWMAHFDEGSSLPPPFNIIITPKSLINFANFLLNSVRWLLGKYTYQKN RNRATIRRPGYSRKRNEMEKSGGQDDETAKVPLTYADIIQRLVARFIHQTKKEMKMDG VNEDDLHEIKQDISSLRYELRDDRRREIVRSSSHIDAVKRDIMRTMSTNSRARVYGGS MRLPKTRPSVAEESEEDEKSDETSSTDEEADETRSRKSSVLYTPPVNSTLPGIISEEA PVRKNQKRRASEADSKLPDRPLSETFQSNFTPKLLPVFAQPPHSALRKTDTSMSFPIN GTILETSVVKPPRGVLRASQENLTTVELMETLRKEMNEKFDRLINGMVEVKSPASHSH VEFNVEK" gene complement(<708740..>710047) /locus_tag="CRE_20389" /db_xref="WormBase:WBGene00082233" mRNA complement(join(<708740..708813,709442..709744, 709799..709976,710027..>710047)) /locus_tag="CRE_20389" /product="hypothetical protein" /db_xref="WormBase:CRE20389" /db_xref="WormBase:WBGene00082233" CDS complement(join(708740..708813,709442..709744, 709799..709976,710027..710047)) /locus_tag="CRE_20389" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98560.1" /db_xref="WormBase:CRE20389" /db_xref="WormBase:WBGene00082233" /translation="MTKNRDMVCSDSENDDSQHSSSFLQQISKDDPSLISTSTVPSKV HQSSKTQKTTGLIQRSHSEPNQASSPSHSASLDFHSQPTIQCDRKRSKNNGLSPSKLP IPSASKIKIFRLTKRPTGTPKQRTQRKRKSMKLGDYHGNNDGIMYSKVLKLAPELRRD YELERDVGRNVGEKAAKKRADDLEKKYFPST" gap 711783..711792 /estimated_length=10 gene complement(<712849..>713892) /locus_tag="CRE_20390" /db_xref="WormBase:WBGene00061812" mRNA complement(join(<712849..713564,713874..>713892)) /locus_tag="CRE_20390" /product="hypothetical protein" /db_xref="WormBase:CRE20390" /db_xref="WormBase:WBGene00061812" CDS complement(join(712849..713564,713874..713892)) /locus_tag="CRE_20390" /note="contains similarity to Interpro domain IPR000264 (Serum albumin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98667.1" /db_xref="InterPro:IPR000264" /db_xref="WormBase:CRE20390" /db_xref="WormBase:WBGene00061812" /translation="MKFPVRCSTSTTYSPTSTYGYSNQYYNPSSTSTSTVYRNPSTSY GNPQQQQGNQNFVAYDTTNQNSPYYYQRVPSTAQYNSVLGVNAGFPQNSNQVLRDQSN QGMYNTQTTQGYGNQGYQNQMMYNNPQNTQTSTFMYASSTQQQPQQYNNNQQQQYGNN QQQQYNTNQQMGSTGYNNQLMYNPSSQQQYGSSTPSPQYSADSISCCSQVSSTCCYQT QQGGYSAQQPSNNAQYSPSVYQYGRK" gene complement(<714306..>714803) /locus_tag="CRE_20391" /db_xref="WormBase:WBGene00082236" mRNA complement(<714306..>714803) /locus_tag="CRE_20391" /product="hypothetical protein" /db_xref="WormBase:CRE20391" /db_xref="WormBase:WBGene00082236" CDS complement(714306..714803) /locus_tag="CRE_20391" /note="contains similarity to Saccharomyces cerevisiae [PIN(+)] prion, an infectious protein conformation that is generally an ordered protein aggregate; SGD:YCL028W" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98592.1" /db_xref="WormBase:CRE20391" /db_xref="WormBase:WBGene00082236" /translation="MLFSGTTSGSSYNSNSVQRDSTGSSSSNQPGYLPDYQGDRYTDP QRIAETQALNKAFFDSIGGAPSPPPETPAQQGMNGSSGSTTSPTGQYNQQQYNNQQYN PQQQQQQQYGSTTSYSSNGQAMYQTGSTNYPTLYQPSASSPQYSNGCTTCRFRRHFDF GQIKF" gene complement(<715319..>716401) /locus_tag="CRE_20392" /db_xref="WormBase:WBGene00061813" mRNA complement(join(<715319..716114,716385..>716401)) /locus_tag="CRE_20392" /product="hypothetical protein" /db_xref="WormBase:CRE20392" /db_xref="WormBase:WBGene00061813" CDS complement(join(715319..716114,716385..716401)) /locus_tag="CRE_20392" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98480.1" /db_xref="WormBase:CRE20392" /db_xref="WormBase:WBGene00061813" /translation="MMLRVLLFTSLVALSIAQLTSSCTSCNSNSNYGENHFKFLRVIT SLPHTYQQSINKINTDNSHHQRRHKRQEFNSHQVPGFLPNTYRPDAFTSDARRQETLR LNQAFFDSLTQSPSASFSSSDPILTPQMDSLPLHVPSNNQQEPQYHHTFKNRPIPVVF ADPEDPKHREPTIFVEVHGDDSNTTTKSSPTLEFVQFSLEPNADGTIYQSTQGNEPSF FESEATRAIIEALTRDDPRYIQNDFRLEFVDPEEDSEDVQLKNMEKIDAIKH" gap 718016..718025 /estimated_length=10 gene <721742..>722351 /locus_tag="CRE_20275" /db_xref="WormBase:WBGene00061814" mRNA join(<721742..721834,721884..721971,722017..722138, 722220..>722351) /locus_tag="CRE_20275" /product="hypothetical protein" /db_xref="WormBase:CRE20275" /db_xref="WormBase:WBGene00061814" CDS join(721742..721834,721884..721971,722017..722138, 722220..722351) /locus_tag="CRE_20275" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98519.1" /db_xref="WormBase:CRE20275" /db_xref="WormBase:WBGene00061814" /translation="MEVFMESKMLLKTLHFIFSLYCATFIGFVFCARRKAQKRDSLAE KNNLKKDKTGKTTETDEDVKFDIKVKPAEQKMDEFDDDEENPLAKIPTKPRYPKQQKL TTTTGLSTSRTQSTGGSKMEGEASFFAPHEKTTGASCYVCFN" gene complement(<722959..>742413) /gene="Cre-pac-1" /locus_tag="CRE_20393" /db_xref="WormBase:WBGene00061815" mRNA complement(join(<722959..723162,723215..723428, 723475..723620,723819..724676,724798..725680, 726755..726842,726897..727038,730424..730738, 730830..731084,731367..731590,731658..731762, 736112..736327,740084..740178,740410..740777, 740820..741069,741277..741472,741611..741758, 742261..>742413)) /gene="Cre-pac-1" /locus_tag="CRE_20393" /product="CRE-PAC-1 protein" /db_xref="WormBase:WBGene00061815" CDS complement(join(722959..723162,723215..723428, 723475..723620,723819..724676,724798..725680, 726755..726842,726897..727038,730424..730738, 730830..731084,731367..731590,731658..731762, 736112..736327,740084..740178,740410..740777, 740820..741069,741277..741472,741611..741758, 742261..742413)) /gene="Cre-pac-1" /locus_tag="CRE_20393" /note="contains similarity to Pfam domains PF00620 (RhoGAP domain), PF00169 (PH domain); contains similarity to Interpro domains IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type), IPR000198 (RhoGAP)" /codon_start=1 /product="CRE-PAC-1 protein" /protein_id="EFO98514.1" /db_xref="InterPro:IPR000198" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR011993" /db_xref="PFAM:PF00169" /db_xref="PFAM:PF00620" /db_xref="WormBase:CRE20393" /db_xref="WormBase:WBGene00061815" /translation="MEEHHRRLHVKAERASVIGGDIVDGAFGSWALRAARSEHQLKQQ SNEDLAQNARISALLGEMRPRMSAMPPNGHQQYHPVQQKRKANTTNIVDVQSQVPPAR QAIYGSWQERHRPSRLYGSQLVSTSSTLPKYDQLYCNTASPVHGSGSTNTIATTGIRR EPPEYGKVGRSVSTWQVTNSEHRPTTQAGWMKSSRPLARGALSPAAYFRELENRNGSG ANSPIVGNLAVVAAPITQRVLLSGGTSVNDEINPEISSNMENHELPDKGTPVTNILSR NTPRQASFMAAMQRHPLKESEVTIINRFCILLYLGTSIESNGGGGSKEESSDVGPDLK TKQPESEESLDSSTLEISETPIRRTRNRNASLRSRQSSRSLGGIDFEKLRLGTARIGD ITTENEDADEDGSSSSLSRKNSRDDGLTSSPTTAPAPVFTTSSTSSVSTSGEPTTSSA APTSGAVTTTSRQTSSNSSVDSNHNEAMKMIRRARPKSYVLATSASMNDDVLSSSIIA NEQSSSISHDTTTSGRELPSSLMGSTNSMEMRSGRATTSSVTTTTTSSGQQTSRSLNA PHPPATHRLQRFIALFNSSKTSDGSGEPKKSRMKRSRTSLPASRFNLPGTILQRDGVA RQTWVKHQEIALGKSGKRNHWEDRWAVLCRRSLYLCVESPAYTSEKTIELSSHTRVDI CNSIVDIAYDWLSSTFSKQRHVVRIVTQNRSEHLIELNTESEMLSWISVLQSSSEDGL SAMGGVDENEVEGTTGSGNNNKISSNSAMLHNSQSIASLASSSCSTATTSEFLNSQHP PLQQANQQQKHQQTVNELSAGVASYLPTSKSFGGLSTTASSTTESAKNRLIMHRYIAK NSQLQSPTSNKKMDVDPSSVASGSTSGSINHHSSQAGPSRESENGEAPTATATTPKSG RKWKKSKAAKQGSGGGSSGSSSGSQQQGATGTPLPVLGVRLADCPTGSCEDHVPMLVQ ICVCVVESYGMDTVGIYRIPGNTAAVNALKESLSNRGFDSVDLSKVESLDPRWRDVNV VSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLLRKLPRPHYDTLRF LIIHLSEITKHSDVNKMECRNLALMFGPSIVRPSDDNMATMVTHMSDQCKIIETLIHY NIWMFDETSTTENAVPEQHPSDGQNPLEPGGYGVGVPTGVSAASFNDMHNLIRKANED QAAAMMNEGGKGQKIKNMLRRNSRRDKSKGKLKIESTAPAAVNPRGWTQPTPSNTSAA SVESAFCGNYQERDIDAEIESRQTVSPQMTSGSADGASSTRLDQSPSLESSLGSLPDT SRTEPILGSSGYRNDDEEGKEAARRKRQEEMYSARRIFIAGAAGAAAAATTSADAEKA AIDALANHSQHLHLASSPAFEVLSEETREKIRRMQKKQNWHDTKELRSTGELLKTYSP TKDLTDALSCTSDYSTTSSAPLSTNPPLAVACADQPNSSSDYASSDPSPCARNPSTSP ASRPSNLAISPGQLHATTSTTSQQQQPMSRSQKIRLRTKLGSRDPSRRHTLSDVDTLK EGRLDKLARWFGIRKSSPDVSRDEVSDEQKNNTETSSQPPPLSSAVPPVIVRTSPNEL TPVSGDEQL" gap 745886..746354 /estimated_length=469 gene complement(<747956..>748366) /locus_tag="CRE_20394" /db_xref="WormBase:WBGene00061816" mRNA complement(join(<747956..748054,748103..>748366)) /locus_tag="CRE_20394" /product="hypothetical protein" /db_xref="WormBase:CRE20394" /db_xref="WormBase:WBGene00061816" CDS complement(join(747956..748054,748103..748366)) /locus_tag="CRE_20394" /note="contains similarity to Pfam domain PF06747 CHCH domain; contains similarity to Interpro domains IPR010625 (CHCH), IPR013032 (EGF-like region, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO98645.1" /db_xref="InterPro:IPR010625" /db_xref="InterPro:IPR013032" /db_xref="PFAM:PF06747" /db_xref="WormBase:CRE20394" /db_xref="WormBase:WBGene00061816" /translation="MSLLNEEVVRMSSDEYWQDIKDEYLQKLANTDPAEIYPSNNPGP ETPDGKVNFECHCVGHLVGSPCGFEFREAITCQKTSDESQMEQQGACGKELLSFMECV TRTQCFNTNGDVDNKAKS" CONTIG join(AAGD02006722.1:1..7522,gap(10),AAGD02006723.1:1..21526, gap(477),AAGD02006724.1:1..18887,gap(10),AAGD02006725.1:1..41412, gap(10),AAGD02006726.1:1..64588,gap(4146),AAGD02006727.1:1..1167, gap(634),AAGD02006728.1:1..49735,gap(10),AAGD02006729.1:1..8186, gap(140),AAGD02006730.1:1..52611,gap(10),AAGD02006731.1:1..44379, gap(194),AAGD02006732.1:1..26508,gap(146),AAGD02006733.1:1..34246, gap(692),AAGD02006734.1:1..56469,gap(10),AAGD02006735.1:1..6472, gap(171),AAGD02006736.1:1..21918,gap(125),AAGD02006737.1:1..61039, gap(518),AAGD02006738.1:1..11764,gap(10),AAGD02006739.1:1..21026, gap(10),AAGD02006740.1:1..10041,gap(30),AAGD02006741.1:1..13918, gap(10),AAGD02006742.1:1..131005,gap(10),AAGD02006743.1:1..6223, gap(10),AAGD02006744.1:1..27860,gap(469),AAGD02006745.1:1..2184) //