LOCUS DS268428 974952 bp DNA linear CON 11-OCT-2010 DEFINITION Caenorhabditis remanei Scfld02_21 genomic scaffold, whole genome shotgun sequence. ACCESSION DS268428 AAGD02000000 VERSION DS268428.1 DBLINK BioProject: PRJNA12588 BioSample: SAMN00627085 KEYWORDS WGS. SOURCE Caenorhabditis remanei ORGANISM Caenorhabditis remanei Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 974952) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE PCAP assembly of the Caenorhabditis remanei genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 974952) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (17-JUL-2007) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA COMMENT The organism is Caenorhabditis remanei Sudhaus, 1974; strain PB4641. This strain is derived from the wild isolate EM464. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain EM464 was established with individuals collected from a pillbug (Armadillidium vulgare) in Brooklyn, New York, NY, USA in June 1990 by Scott Baird. EM464 was described as /Caenorhabditis vulgaris/Baird, Fitch & Emmons, 1994, which was later shown to be a junior synonym of C. remanei (Sudhaus & Kiontke 1996). Annotation was added to the scaffolds in October 2010. FEATURES Location/Qualifiers source 1..974952 /organism="Caenorhabditis remanei" /mol_type="genomic DNA" /strain="PB4641" /db_xref="taxon:31234" gene <1179..>3126 /locus_tag="CRE_13250" /db_xref="WormBase:WBGene00061625" mRNA join(<1179..1198,1247..1327,1389..1595,1715..1994, 2042..2313,2802..>3126) /locus_tag="CRE_13250" /product="hypothetical protein" /db_xref="WormBase:CRE13250" /db_xref="WormBase:WBGene00061625" CDS join(1179..1198,1247..1327,1389..1595,1715..1994, 2042..2313,2802..3126) /locus_tag="CRE_13250" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94500.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13250" /db_xref="WormBase:WBGene00061625" /translation="MEIQRELKTPCFSLLHLPFVAMKHVLQCMDSTDLLRTAFVSKRM GRYTKLATARIKLIEIEFTNNRSTINLLDFGCLVESYKDKDIMREKKNENDRNYSLMP WINMRNGSILENTAKISNLIRNTFECSNIDLVIAEDVLPKKTEEILEMFQQYRELTYK PRSITTTALNKIMDSANLQHFLNIAAEIPKDFNHKNKFKFDNAQYQDATWIKLEDILN MENVRGVQLVRNNFTQSQVNTLLKRWLASDIDMFYWFILELNDGIEITEVLDELLTFK FRRDAMTIDFTLAKTTSSFRERQILVICRFERYMVLTGWRTDKVITECGEDIYERDDI YDNAYNILKLLKRKQEIDTELEKNDLELATRRRLVEDVKKLVAELEEMHVIFENEQAF VI" gene complement(<3871..>24950) /gene="Cre-unc-103" /locus_tag="CRE_13346" /db_xref="WormBase:WBGene00061624" mRNA complement(join(<3871..4031,6516..6619,7030..7096, 7450..7680,7855..8135,8421..8657,8709..8914,9628..9935, 9991..10049,10116..10270,10852..10974,11137..11365, 12103..12185,23713..23717,24629..>24950)) /gene="Cre-unc-103" /locus_tag="CRE_13346" /product="CRE-UNC-103 protein" /db_xref="WormBase:WBGene00061624" CDS complement(join(3871..4031,6516..6619,7030..7096, 7450..7680,7855..8135,8421..8657,8709..8914,9628..9935, 9991..10049,10116..10270,10852..10974,11137..11365, 12103..12185,23713..23717,24629..24950)) /gene="Cre-unc-103" /locus_tag="CRE_13346" /note="contains similarity to Pfam domains PF00027 (Cyclic nucleotide-binding domain), PF00520 (Ion transport protein); contains similarity to Interpro domains IPR005821 (Ion transport), IPR003967 (Potassium channel, voltage-dependent, ERG), IPR000595 (Cyclic nucleotide-binding), IPR003938 (Potassium channel, voltage-dependent, EAG/ELK/ERG), IPR014710 (RmlC-like jelly roll fold)" /codon_start=1 /product="CRE-UNC-103 protein" /protein_id="EFO94505.1" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR003938" /db_xref="InterPro:IPR003967" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR014710" /db_xref="PFAM:PF00027" /db_xref="PFAM:PF00520" /db_xref="WormBase:CRE13346" /db_xref="WormBase:WBGene00061624" /translation="MNSSVPMIDLSSGDDEEVDYAMMRSYLPMPGPSDGEMEVPSLLF GNGNLCRSTLSINQPSMAPSPFSEITVSSQRPLVARSGSNSSEHTALMKEALKKKPVA DIAHVSTVLSLGADVLPEYKLQQTRVHHCTIVHYSPFKAVWDWIILLLVIYTAIFTPY VAAFLLRELQDTTKKSRFTEPLEIVDLIVDIMFIVDIIINFRTTYVNENEEVCEGQVV SHPGKIATHYFKGWFIIDMVAAVPFDLLLVSTNSDETTTLIGLLKTARLLRLVRVARK LDRYSEYGAAVLLLLMATFALIAHWLACIWYAIGSAELSHKEYTWLHQLSKQLTQPYT STNGTVPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMY ASVFGNVSAIIQRLYSGTARYHTEMSRLREFIRFHQIPNPLRQRLEEYFQHAWAYTNG IDMNLVLKGFPDCLQADICLHLNRNLLSGCAAFAGSTPGCLRALSMRFRTTHSPPGDT LVHRGDILTGLYFIARGSVEILNDDNNVMGVLGKDDIFGENPLLYDEVGKSSCNVRAL TNCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLRMSS SLNKDRHTTPPDGESRNPTAVRRSAESVSRCDSNPIDRRQSAGSRSSSRCSPPHAALT ATRSEATPLLRRPIQHEEDDALFDDIRAFARGNTVTVSPTVAGNSVSPTTAIVNNDGT QSQQLSDRSDEYEDRRSYMFGRRLENIESQIERMQNKFNSDMETLIKLVKDQAMARNN GSSNEGDQQYPRHRPNNYISSAIRLPNGGGGGVVEDMRVSRLSSHEPPTPTQESDTIL " gene <62647..>64100 /locus_tag="CRE_13251" /db_xref="WormBase:WBGene00061622" mRNA join(<62647..62768,63022..63405,63824..63923, 63969..>64100) /locus_tag="CRE_13251" /product="hypothetical protein" /db_xref="WormBase:CRE13251" /db_xref="WormBase:WBGene00061622" CDS join(62647..62768,63022..63405,63824..63923,63969..64100) /locus_tag="CRE_13251" /note="contains similarity to Pfam domain PF05276 SH3 domain-binding protein 5 (SH3BP5); contains similarity to Interpro domain IPR007940 (SH3-binding 5)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94399.1" /db_xref="InterPro:IPR007940" /db_xref="PFAM:PF05276" /db_xref="WormBase:CRE13251" /db_xref="WormBase:WBGene00061622" /translation="MTEGGDDQLVSIRKQLENLNDATDDINSYEMKLETVKKQFCETQ LMFNKEISGIPKKLAKQISKSRPYFDLKSREPEIRKCVQQAAALFERQKTSVEMAREQ VQILHCSLNNNQELDAEKQYVEVIEQQLDLVKEAEEECLKAEKMHAARVRDLLQIEMA LSKLLQEHGSSIKKARPYYERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRVLE QISEQIHQERASQSSLAQSSDAESDSS" gene complement(<64422..>65143) /locus_tag="CRE_13347" /db_xref="WormBase:WBGene00061621" mRNA complement(join(<64422..64578,64625..64746,64792..65033, 65071..>65143)) /locus_tag="CRE_13347" /product="hypothetical protein" /db_xref="WormBase:CRE13347" /db_xref="WormBase:WBGene00061621" CDS complement(join(64422..64578,64625..64746,64792..65033, 65071..65143)) /locus_tag="CRE_13347" /note="contains similarity to Homo sapiens Isoform 1 of Cisplatin resistance-associated overexpressed protein; ENSEMBL:ENSP00000240304" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94416.1" /db_xref="WormBase:CRE13347" /db_xref="WormBase:WBGene00061621" /translation="MSSSDRRFSVTLSEDDLRPHMRKPSLLRTLETSEPPKLESLKEK SEIEELRKKMEKREEVKREVKRRVEEEEREKERKKRDEEIRKETQELLAIRDVTSYGN NATNPLPLGLPKLGRRVNNFQYFRWDSDEEIPVIPLERAQSSLRTATYSPFRAPSSSS ACELCTLALRSLDKSGAPTKSAACAHVDAFVASSHHH" gene <66704..>68040 /gene="Cre-rnr-2" /locus_tag="CRE_13252" /db_xref="WormBase:WBGene00061620" mRNA join(<66704..66754,66855..67202,67256..67611, 67662..>68040) /gene="Cre-rnr-2" /locus_tag="CRE_13252" /product="CRE-RNR-2 protein" /db_xref="WormBase:WBGene00061620" CDS join(66704..66754,66855..67202,67256..67611,67662..68040) /gene="Cre-rnr-2" /locus_tag="CRE_13252" /note="contains similarity to Pfam domain PF00268 Ribonucleotide reductase, small chain; contains similarity to Interpro domains IPR012348 (Ribonucleotide reductase-related), IPR000358 (Ribonucleotide reductase); coded for by the following C. remanei cDNAs: DT933718, DY526705, DY527995, DY526059" /codon_start=1 /product="CRE-RNR-2 protein" /protein_id="EFO94503.1" /db_xref="InterPro:IPR000358" /db_xref="InterPro:IPR012348" /db_xref="PFAM:PF00268" /db_xref="WormBase:CRE13252" /db_xref="WormBase:WBGene00061620" /translation="MTLGEIQNIEKENAAVEPKHSSKKLKLEQDIEKLSIVEKLKDTE KNEETEGNALDANEPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMN DWEKMNGDEQYFISRVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIH SEMYSKLIETYIRDEKERLTLFNAIFEFEFIKKKADWAMKWISDKKASFAERLIAFAA VEGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLTQER IFEIIRDAVCIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLAELGCDKLYNVKNP FDFMENISIDGKTNFFEKRVSEYQRPGVMSTETERQFDLEADF" gene <68424..>69701 /locus_tag="CRE_13253" /db_xref="WormBase:WBGene00061610" mRNA join(<68424..69032,69175..69438,69489..>69701) /locus_tag="CRE_13253" /product="hypothetical protein" /db_xref="WormBase:CRE13253" /db_xref="WormBase:WBGene00061610" CDS join(68424..69032,69175..69438,69489..69701) /locus_tag="CRE_13253" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94421.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE13253" /db_xref="WormBase:WBGene00061610" /translation="MDTQEVSAIQRRRSSKASRILSFQINTSNSQFPNLEILPKMSTK KEIAEKRIKQLHLTPGTIFMNRWSIEGMIGSGGYGQIFLAMDTKKNEVRAVKIEPKMR MEMITKRMIMEMDVMLKMQGKQHVPLVYSSGYNNEFNFIVMQLLSENTGDIRKRSPAG RLSKETVGRIVYQTVNALKDIHEMGYVHRDVKPANICFGCHQQNRHILYLLDFGLLRR FKTDAGIRKPSRPNAGFKGTERYVSVRVHEKLEQTPWDDLFSVMYSAYELVVGEVPWR HLEDVEEIHAVKKLMNELNNNGEMFKDSASVLIDFHKMLVELDPNVDPPYEKLMNCAK VMYQPKELNDLYDWDEGFKLTLSDEKD" gene complement(<70401..>71538) /locus_tag="CRE_13348" /db_xref="WormBase:WBGene00061619" mRNA complement(join(<70401..71148,71200..71403,71453..>71538)) /locus_tag="CRE_13348" /product="hypothetical protein" /db_xref="WormBase:CRE13348" /db_xref="WormBase:WBGene00061619" CDS complement(join(70401..71148,71200..71403,71453..71538)) /locus_tag="CRE_13348" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94395.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13348" /db_xref="WormBase:WBGene00061619" /translation="MSEHRGFSLFSLPQSVLKEVVLSFDVISRLNVSLCSKKSKSIAG SCKMPHLKVSMWLYESSKITLKVTQVNQYPELETSHILNVIPTDNKEDIRKEIQTSEF AWEFYHDPSVNLTEIICNRILEFYGLSSLKSVVFQKDVEQSDFDKFPVLLPDAGTISI QKKEITQKDLDTLFKNHDNVQSFFLRHPYPQGYKTWKARNLWLNGGLPKIESLLEMDY EKLVCRRSFYKTSEINRFLKHWLQSTNGGNHKYLKQEIRLCNVKNDSNMLEDLPVTPW NPKQRGQFVHFRNPYFDAAIDCSKGFDLLRDDGVLATVMPSDDAFTFNIWNERFPDIP KEDFPPNSVFY" gene complement(<73083..>74492) /locus_tag="CRE_13349" /db_xref="WormBase:WBGene00061618" mRNA complement(join(<73083..73830,74144..74356,74407..>74492)) /locus_tag="CRE_13349" /product="hypothetical protein" /db_xref="WormBase:CRE13349" /db_xref="WormBase:WBGene00061618" CDS complement(join(73083..73830,74144..74356,74407..74492)) /locus_tag="CRE_13349" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94517.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13349" /db_xref="WormBase:WBGene00061618" /translation="MTKTKIFPLFSLPYLALKDVIISLDVLSRMNLSICSKRSKRISS ALTIPELQLSLILCEDSKSIIEVIATDQREDVDVPLMEHVWNMIPTDIKEDFGKVIEI SKLEWEFYHDPSVNLTGILCNRLLEFYGWSSWTEVVFQKDIEQSDFDKFPVLLPSAGE ISFDKGEVTREELDTLFMKHGNIQLINLDCRYPEGYGMWCARTVGFFRAPQNIEDLLK MDCEKVGCAVTGYKNSDVNRFLKHWLQSTNCGNHKYLKREIRLCDVENDSNMLEDLPV TPWNPKQRGQFFHFRNPHFDAAIDCSKGFDLLRDDGVLATVISDEDEFTFNIWNERFP DIPKEDFPPNSVFY" gene <74924..>75983 /locus_tag="CRE_13254" /db_xref="WormBase:WBGene00061617" mRNA join(<74924..75135,75227..>75983) /locus_tag="CRE_13254" /product="hypothetical protein" /db_xref="WormBase:CRE13254" /db_xref="WormBase:WBGene00061617" CDS join(74924..75135,75227..75983) /locus_tag="CRE_13254" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94448.1" /db_xref="WormBase:CRE13254" /db_xref="WormBase:WBGene00061617" /translation="MNLSICSKRSKRISSAYTMPELNISIELYKDTSRALHLKSIIYV NEVRKGGISHWLHVIPTYIKKNFGKIFQISEFEWKFYHDPSVNLTEILATRLSGFYGW NSLRFVIFGKDIEQSDFEKFPVLLSCVEGIIIRKKRVKREDLDTLFMNRRNIQSFNIE GRYPVGYDNYGVWCARVMVLLHAPQNIEDLLRIDCEKIGCAVTGYKNSDVNRFLKHWL QSTNGENHKYLKREIRLCNVENDSNMLEDLPVTPWNPKQRGQFYYCQNSHFNPAIDCS KGFDLLREDGVLATVMPGEGEFIFNIWNERFPDIPKDDFPSNSVFY" gene complement(<76858..>78016) /locus_tag="CRE_13350" /db_xref="WormBase:WBGene00061616" mRNA complement(join(<76858..77623,77678..77881,77931..>78016)) /locus_tag="CRE_13350" /product="hypothetical protein" /db_xref="WormBase:CRE13350" /db_xref="WormBase:WBGene00061616" CDS complement(join(76858..77623,77678..77881,77931..78016)) /locus_tag="CRE_13350" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94349.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13350" /db_xref="WormBase:WBGene00061616" /translation="MSEHRRFPLFSLPQLVLKEVVLSFDVISRLNASLCSKKSKSIAA SCKMPHLEVSMCLYESSKNTMKVTQVNRYPELETSHILNVIPTDSKEDIRKVTQTSEF AWEFYHDPSVNLTAIICNRLLELYGLSSLKSVIFQKDVEQSDFDKFPVLLPNAERISI QKKEITQKDLDILFMNHDNVQSFCLRHPYPQGYKTWKARNLWLKGGLPKIESLLEMDY EKLVCRQSFYKTSEINRFLKHWLQSTNCGNHRYFKREIRLFRVENDSNMLEDLPVTPW NPKQRGQFFHFRNPYFNAAIDCSKGFDLLRDDGVLATVMPSDDAFTFNIWNERFPDIP KKDFYSESCIFPNLVHY" gene <79339..>80042 /locus_tag="CRE_13255" /db_xref="WormBase:WBGene00081191" mRNA join(<79339..79602,79711..79878,79926..>80042) /locus_tag="CRE_13255" /product="hypothetical protein" /db_xref="WormBase:CRE13255" /db_xref="WormBase:WBGene00081191" CDS join(79339..79602,79711..79878,79926..80042) /locus_tag="CRE_13255" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94341.1" /db_xref="WormBase:CRE13255" /db_xref="WormBase:WBGene00081191" /translation="MPQSKFIEDPLSDNPYRKHIKQYSWPQIVSFLTLVAVGIPRCVQ SINSENGPERLPTIKKRMVCVLIFGICQSIFGMVSMFVFKPESETRFLLVSISQFVTM VLVGLFAFEYLFTCILHYDYLAIPAAISAAVLAVVLKNYAERCYYGLYIAWSIQLFSG VLELYLVLNNRIMDGMFHEESQ" gene complement(<81204..>82330) /locus_tag="CRE_13351" /db_xref="WormBase:WBGene00061615" mRNA complement(join(<81204..81936,81993..82199,82245..>82330)) /locus_tag="CRE_13351" /product="hypothetical protein" /db_xref="WormBase:CRE13351" /db_xref="WormBase:WBGene00061615" CDS complement(join(81204..81936,81993..82199,82245..82330)) /locus_tag="CRE_13351" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94392.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13351" /db_xref="WormBase:WBGene00061615" /translation="MTETRGFPLFSLPYVALKDVVLSLDIFSRLNLSSCSKKSKSIAG SYKMSTLEIESINFCENSEHIVKISEIYSSPEPKITHTLNIIPSNIEANYGKIIEISG FEWKLHHNSPMNLIAKFSVFYKVPQSKSVGFNRDVEKSDINDETIVLFNTRKLGIQKE KLTTEELNLIFSKLHDIQVFSIWSEIPEDYDNYEIWKAKEIRLRDPPRTSEDLLRMDC EKLICNGPKFKTSDLNLFLKKWMQLTLKKEKTYLKREIAVFRVETDSNLYEDLPITPW NPNQRGQYFQGHCQYFHNFSIDCSQGFDLFRDDGVLATVIFDHNAFKFYIWHERFPVV TDTRPCY" gene <83684..>84167 /locus_tag="CRE_13256" /db_xref="WormBase:WBGene00061614" mRNA join(<83684..83996,84043..>84167) /locus_tag="CRE_13256" /product="hypothetical protein" /db_xref="WormBase:CRE13256" /db_xref="WormBase:WBGene00061614" CDS join(83684..83996,84043..84167) /locus_tag="CRE_13256" /note="contains similarity to Interpro domains IPR015422 (Pyridoxal phosphate-dependent transferase, major region, subdomain 2), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94433.1" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="WormBase:CRE13256" /db_xref="WormBase:WBGene00061614" /translation="MAKIPSLAAKISTDNFGKWFPDNPAPKILKYLIKNRSKQPELTA AHQYTRGYGHPMLVDILAKMYSHFYSVQVDPMNEVLVTVGAYLSLYYAFLGWINKGDE VLIIEPAYDCYYPQVKFAGGVPVPVVKNLAEGATSASHFNIDF" gap 84210..84219 /estimated_length=10 gene complement(<84789..>85878) /locus_tag="CRE_13352" /db_xref="WormBase:WBGene00061613" mRNA complement(join(<84789..85563,85703..>85878)) /locus_tag="CRE_13352" /product="hypothetical protein" /db_xref="WormBase:CRE13352" /db_xref="WormBase:WBGene00061613" CDS complement(join(84789..85563,85703..85878)) /locus_tag="CRE_13352" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94348.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13352" /db_xref="WormBase:WBGene00061613" /translation="MPKLEIQSIDFSKNKENEEEVSESRKTVVMVKQFEGENITIHVF NIIATDIKEDIGKIIQSSEFEWEYHHDPSVNLTGIFCNNISKFYNIKSPLKSFSAKRK LNNLDFDHSPNILSRPEKVCILMESVSTEELDMVFSKCQDMQHLLTRAEIPDEYDNYG IWNAKEMWLRYAPPTIEGLLNMNYERLICRRSKLKTSDLNLFLKKWLQSTEKEDNKYK IHEIKLSRIENDSNIFEDLPVIPWNPRQRGQFFFHRNPFQNFGIDCSRDFDLLRDDGV LATVSYIRIPHLYDQFYFYVWRERFHVIPNDALFDPAIIF" gene <86470..>87217 /locus_tag="CRE_13257" /db_xref="WormBase:WBGene00061612" mRNA join(<86470..86645,86716..>87217) /locus_tag="CRE_13257" /product="hypothetical protein" /db_xref="WormBase:CRE13257" /db_xref="WormBase:WBGene00061612" CDS join(86470..86645,86716..87217) /locus_tag="CRE_13257" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94424.1" /db_xref="WormBase:CRE13257" /db_xref="WormBase:WBGene00061612" /translation="MPKLEIQSIDFSKNKENENEVSESRKNVVMVKQFEEENITIHVF NIIATGIKEDIGMIIQSSEFEWEYHHDPSVNLTGILCNNISKFYNIKNPLKSFSARRE LNNLDFDHSPNILSKPEKVYIPMESVSTEELDMIFSKCQNVQFLLTRVEIPDEYDNYG IWNAKQMYLRYAPPKIEGLLNMNYERLICQRSKLKTSDLNLFLKKWLQSDEKEDNKYK THEILSK" gene <89014..>90173 /locus_tag="CRE_13258" /db_xref="WormBase:WBGene00061611" mRNA join(<89014..89243,89420..>90173) /locus_tag="CRE_13258" /product="hypothetical protein" /db_xref="WormBase:CRE13258" /db_xref="WormBase:WBGene00061611" CDS join(89014..89243,89420..90173) /locus_tag="CRE_13258" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94414.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13258" /db_xref="WormBase:WBGene00061611" /translation="MNLSICSKRSKMISCAFTMPELEISLMLCEDSKNIITVKQFDQR VNVPWFCPIPRRGTLHKLNVISTDIKENFGKVNETSELDWEFYHDSSVNLSAVLCNRL LECYGWSSWKGVIFQKNIEQSDFDKFPVLLPSAGTISFDKREVTRAELDTLFMEHGNI QLFSIDCRYPERYDNYGMWCARTVAFLHAPPNIEDLLKMDCEKLVSVHSFYKTSDVNR FLKHWLQSTNGNQKYLKREIRVSKVENDSNMLEDLPVTPWNPKQRGQFFHFRNPLFNA AVDCSKGFDLLRDDGVLATVMPGDNTFCFNIWNERFPDIPKEDFRPNSVFY" gene complement(<90850..>92073) /locus_tag="CRE_13353" /db_xref="WormBase:WBGene00081210" mRNA complement(join(<90850..91098,91113..91376,91474..>92073)) /locus_tag="CRE_13353" /product="hypothetical protein" /db_xref="WormBase:CRE13353" /db_xref="WormBase:WBGene00081210" CDS complement(join(90850..91098,91113..91376,91474..92073)) /locus_tag="CRE_13353" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94441.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE13353" /db_xref="WormBase:WBGene00081210" /translation="MDTQEVSAIQIRKSSRILSFQINTSNSQFPNVEILPKMSTKKEI AEKRIKQLHLTPGTIFMNRWSIEGMIGSGGYGQIFLAMDTKKNEVRAVKIEPKMRMEM ITKRMIMEMDVMLKMQGKQHVPLVYSSGYNNEFNFIVMQLLSENIGDIRKRSPAGRLS KETVGRIVYQTVNALKDIHEMGYVHRDVKPANICFGCHQQNRHILYLLDFGLLRRFKT DAGIRKPSRPNAGFKGTERYVSVRVHEKLEQTPWDDLFSVMYSAYELVVGEVPWRHLE DVEEIHAVKKLMESIVQYHFQYLQNELNNNGEMFKDSASVLIDFHKILVELDPNVDPP YEKLMNCAKVMYHPKELNDLYDWDEGFKLTLSDEKD" gene complement(<92471..>92914) /locus_tag="CRE_13354" /db_xref="WormBase:WBGene00061609" mRNA complement(<92471..>92914) /locus_tag="CRE_13354" /product="hypothetical protein" /db_xref="WormBase:CRE13354" /db_xref="WormBase:WBGene00061609" CDS complement(92471..92914) /locus_tag="CRE_13354" /note="contains similarity to Pfam domain PF00268 Ribonucleotide reductase, small chain; contains similarity to Interpro domains IPR012348 (Ribonucleotide reductase-related), IPR000358 (Ribonucleotide reductase); coded for by the following C. remanei cDNAs: DR778701, DY529124, DR407381, DY527146" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94473.1" /db_xref="InterPro:IPR000358" /db_xref="InterPro:IPR012348" /db_xref="PFAM:PF00268" /db_xref="WormBase:CRE13354" /db_xref="WormBase:WBGene00061609" /translation="MSSSQGNNTISSVFRLINYFFRDEGLHRDFACLLYSMLQNKLTQ ERIFEIIKDAVCIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLAELGCDKLYNVK NPFDFMENISIDGKTNFFEKRVSEYQRPGVMSTETERQFDLEADF" gene complement(<93889..>96097) /gene="Cre-kin-19" /locus_tag="CRE_13355" /db_xref="WormBase:WBGene00061608" mRNA complement(join(<93889..94044,94187..94342,94519..94633, 94681..94794,94842..94996,95598..95697,95820..95899, 95948..>96097)) /gene="Cre-kin-19" /locus_tag="CRE_13355" /product="CRE-KIN-19 protein" /db_xref="WormBase:WBGene00061608" CDS complement(join(93889..94044,94187..94342,94519..94633, 94681..94794,94842..94996,95598..95697,95820..95899, 95948..96097)) /gene="Cre-kin-19" /locus_tag="CRE_13355" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related); coded for by the following C. remanei cDNAs: DT937112, DY529139, DR781876, DR409726, DY527289, DR776648" /codon_start=1 /product="CRE-KIN-19 protein" /protein_id="EFO94409.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE13355" /db_xref="WormBase:WBGene00061608" /translation="MAGVMSVKDFIVATKYKLIRKIGSGSFGDIYVSINVTNGEEVAI KLESNRARHPQLLYESKVYRILQGGVGIPHIRWYGTEREYNVLVMDLLGPSLEDLFNF CSRRFTMKTVLMLADQMIGRIEYVHVKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLA KKYRDSRTRTHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRGTL PWQGLKAATKKQKYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESPDYMYL RQLFRILFRTLNHQYDYTFDWTMLKQKAQQSQTNAIAGTATTQNATGVPSSGVPPGVA PSGNTPQ" gene <101228..>105522 /locus_tag="CRE_13259" /db_xref="WormBase:WBGene00081223" mRNA join(<101228..101479,102323..102483,102741..102918, 102964..103163,104073..104340,104388..104545, 104593..104773,105382..>105522) /locus_tag="CRE_13259" /product="hypothetical protein" /db_xref="WormBase:CRE13259" /db_xref="WormBase:WBGene00081223" CDS join(101228..101479,102323..102483,102741..102918, 102964..103163,104073..104340,104388..104545, 104593..104773,105382..105522) /locus_tag="CRE_13259" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94495.1" /db_xref="WormBase:CRE13259" /db_xref="WormBase:WBGene00081223" /translation="MSECAQRLNLDEYIANELSAIIELPVSSRNQFFGLKRLVAQIDQ THDPIVKSSQKLHDLQLYILQKKTIFEEKVERHRETLRGSIQLLIVTLVLFILIALYY GIYFYLNQERPWWIEQLLSGSVSLIIFCGFYSYLFYPRPLETISEQLERVKKLHRNFK FSSGSLNDRFEEVDKEVDCLASIYSESVITENKLLAVGAVILLLISEYLFIRFWISVY LTVNSTNLNLEPLNCIFFSITGFFVGPFWYFLVERFLIINKVKFNIAMPEKLGEEDTS EADIISQLYNLTGESSNTRPTLYRLENVLERLQSSPQTGEKLSDDVEKLNRIECEILE KRAYYEGMQKFQKESYYFTRNLLMAVGGLMIPVVSIFIVASFMEKELPFMIRGLLSET TFIPVVAFIIYHIYTNKPRLPSGIQNEKIRHKTAEKMTSTEFTKRQLKLAYILSDCTG SMRRQILELRNQEMVMILATLLLVLIYSFIVSNSSFGLFNGYLMFVSACAIISYFRLD KTVI" gene <105750..>106170 /locus_tag="CRE_13260" /db_xref="WormBase:WBGene00081202" mRNA join(<105750..105896,105942..106034,106084..>106170) /locus_tag="CRE_13260" /product="hypothetical protein" /db_xref="WormBase:CRE13260" /db_xref="WormBase:WBGene00081202" CDS join(105750..105896,105942..106034,106084..106170) /locus_tag="CRE_13260" /note="contains similarity to Pfam domain PF04110 Ubiquitin-like autophagy protein Apg12; contains similarity to Interpro domain IPR007242 (Autophagy protein 12)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94403.1" /db_xref="InterPro:IPR007242" /db_xref="PFAM:PF04110" /db_xref="WormBase:CRE13260" /db_xref="WormBase:WBGene00081202" /translation="MSEIQPQDAPKLKPPKIRVRIDKIDDESGEVKKKNYDIKLSDTV AHFTATMRKVLRIPASDSLFFYIHERFSPSLDTTFEILARHYAEKDEKGKEVLHLKFS TTPVYG" gene <107781..>109061 /locus_tag="CRE_13261" /db_xref="WormBase:WBGene00061607" mRNA join(<107781..108029,108106..108257,108518..108734, 108786..>109061) /locus_tag="CRE_13261" /product="hypothetical protein" /db_xref="WormBase:CRE13261" /db_xref="WormBase:WBGene00061607" CDS join(107781..108029,108106..108257,108518..108734, 108786..109061) /locus_tag="CRE_13261" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94513.1" /db_xref="WormBase:CRE13261" /db_xref="WormBase:WBGene00061607" /translation="MSQEEVATNTFVNAELTGFLTQRADCRAALRVVQRLLETVPQED RMTTQEEIQDLECTEDIVYDMEEFYTNREKRYTRYLDHLEYWGAMVVIFILGSFVTCG NLSKQGEEKMTLARTILSGPIMVIGYMVVVAYWGGILSANSEKDKEERQPVEDDTESS EETEWEDTMKMSELTNRQLEMVDTFANVIEPTRANISKTTCKILSIFTWFNVFVAAFS IFGIAIIFNTGLLYKSDNPLDAVDALFFMGLTCISVTLGTLLFEAYMIAAKANSGFFN GLDDDSELIQAIQKKLLEFVG" gene complement(<110379..>113976) /locus_tag="CRE_13356" /db_xref="WormBase:WBGene00061606" mRNA complement(join(<110379..110514,110558..110697, 111260..112009,112077..112298,112354..112744, 112803..112955,113012..113312,113356..113586, 113635..113702,113753..>113976)) /locus_tag="CRE_13356" /product="hypothetical protein" /db_xref="WormBase:CRE13356" /db_xref="WormBase:WBGene00061606" CDS complement(join(110379..110514,110558..110697, 111260..112009,112077..112298,112354..112744, 112803..112955,113012..113312,113356..113586, 113635..113702,113753..113976)) /locus_tag="CRE_13356" /note="contains similarity to Homo sapiens Isoform 2 of Uncharacterized protein KIAA1409; ENSEMBL:ENSP00000256339" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94442.1" /db_xref="WormBase:CRE13356" /db_xref="WormBase:WBGene00061606" /translation="MCLLFNRVVDMENPERHTVYLVVSLFVTFLSNKNSTPTDEKANA KKQSLVFRHFNTLLGYSSTEKCFTIPPARLRKAAVCNAFISGLPEILDMNLHTGNQLL PTVVQLLIHLPSPQKLASDQNVTNYSLALLTQHTRHLWLHSLILILYKYRFDQLPVSE NIVRLIGIVVKTLQNQVHECSDSDQSQEIDTWDEIEEDDGGRAELIRPESLTVTTIKE ATPAAEGMIHIGAVRVMQPTIVEPEGLAPEPIISRKRSTINQEVKRKKSAIEVVKKSC TLRCGHCNEAIEMFDEETVSLCLIALETFLHREPSMAAPILFKILYTVTRLIDTPMYP WHSTEMFVPANSRSVAKQMLRVSLHHLSTSAICLQLFDTKIPRPDAFWSVIALSLADF PELSPVHFIQILMEDLEESWPGSVRLIMKNLAFYIVEISTDMYNKQWENLLANMETFF KRYHTAISADNATPPTRAEIENVIVVMSHVLKVQAASTSKSPVALVEAFSKWLSESLH GAEVSLESLLGVCTACNRALIRERDKQCVTRAVVTELMQAIKFKAKLHEANYVTIANM VLQDAGEDIEVPLLDDQFNTAASEAIRPFLFEVLDFIADLHVIAKLKKETNSDALGGD LKVKLAEAIAVEMSRSNARDCRTVIRFIPWLMSPPSVTQAAPGAFADSVTNVRVLSWL LLGALHANHSCLPVPIECSQHMADYIHFVLAGFADQSKQSVVHMSALFHAFHLCQLWT VYCERAATYSSTTAFAHLVDFWARVTPAILQLLSHSKVVSLADMVNLHFLNTIQALQQ VNSALLCQLYSMWAPILTAYHSQIPNQLRMKLDSCQNQPSLEAPLVTEWLKKVRYKIS QVELQTSAASPYYTV" gene complement(<115825..>123626) /gene="Cre-unc-79" /locus_tag="CRE_13357" /db_xref="WormBase:WBGene00061605" mRNA complement(join(<115825..116073,116668..117630, 117964..118046,118097..118412,118459..119037, 119878..120587,120634..120748,121055..121182, 121230..121390,122941..123058,123599..>123626)) /gene="Cre-unc-79" /locus_tag="CRE_13357" /product="CRE-UNC-79 protein" /db_xref="WormBase:WBGene00061605" CDS complement(join(115825..116073,116668..117630, 117964..118046,118097..118412,118459..119037, 119878..120587,120634..120748,121055..121182, 121230..121390,122941..123058,123599..123626)) /gene="Cre-unc-79" /locus_tag="CRE_13357" /note="contains similarity to Drosophila melanogaster Flybase gene name is unc79-PA; FLYBASE:CG5237" /codon_start=1 /product="CRE-UNC-79 protein" /protein_id="EFO94436.1" /db_xref="WormBase:CRE13357" /db_xref="WormBase:WBGene00061605" /translation="MAFLLKYYTFSAKIRTLSEFQIRLSTNQQPPSNAEIITTLRYFQ QTLIGFLKDFPATQTNYCERFSSDAARWNLYPNLNYSALYYAIVNLLDVFPLITSQPQ AIGEAILDTIKALMIFLERDSLEQLPLLLASQLGVFPRELDKQIVHLLADCVFPFAIN DETYVKLSVPGVLMLVLQQTHDPSLHTWIVESAMNCSQRVYQDLLQVIAKGTCESRVA AANLLFHYWPFPNPQILHRKTIQYRVHAWRTIQCQSTGCTDKSSSVKRCYDPVICADV ADTSPPIFLCRKCAEQVTGERKVVTQHIAQPMPASNATCQRVECQSQSRLAVTICCSH ECTRGHNHVPMRLCMDCSTLVHEEGTIKHLQHQGSGVVWSTDDQWPTVESIVKLLRET TMFEGNEGEGKKPKWLRQLDGGTSMGKEIDKMADERRMLSRFGVWLMAALCPPNETAD PRAIGYIMQNVFEWFATTALLPSDSMGASLEQLKTDFVSDWINLGMRVHNPVFISSLC GECEEHDGRPVIERIKEGLGRLLALMPYDVISLETWSRVMPRWLEAIVNDCTEDNQPE LKVLLCKIFEPDLCPLPFETSEVYGFMTGRIGGDDYDEMFNALQWLHQLSRLDITIPL HMILEHFNRCLQKLRTIEIPPLSENDLEEEEMSVHVVLVDTLVLQMKLNDAERSMTPV LTDKLFECMQLLVSIPIRAVPHSCHDPELDGFADCQQCQQTAFVQQMVMNITQKVCPK REVAIITTVDEDAIYDEQTSDTPTGPGSTMLSPLTESGSKGTSPGTSAPSRPFPDNLQ TQTMCVAQACEQEEEVEECEFVGILPCEEMEVAMAEAVTHDNVLETGQVVTSTTVHPS IKGQIVQTPQTPVQKQPPSDFWVTSVGRFRFSFEQLPAQLKMIHSLLSCLDVAVEPDV EFFVMSSIKYLCLHCEALSNARREHRGFLIWTQENQMVPKLWERLRSDYIQVGELATH LLLHAMTLPCGEEMFWKMVHRDFTSPQWNVRFDAVGKAYVLAQMIKTAPVKANKVVQT CLASVFYHFIASLHDPNPSVAQRAIIALRAMPSHTLKLMCMCFESQFDHCIVDRPLII HAITMMSILLPDQTTLTFDFFIQRFETLVLESQLSSQTEENIFVQGNSSIGSCDQTTK FQT" gene <131981..>137440 /gene="Cre-rcq-5" /locus_tag="CRE_13262" /db_xref="WormBase:WBGene00061604" mRNA join(<131981..132109,132157..132436,133141..133666, 135126..135656,135707..135973,136564..136681, 136736..137080,137128..137295,137339..>137440) /gene="Cre-rcq-5" /locus_tag="CRE_13262" /product="CRE-RCQ-5 protein" /db_xref="WormBase:WBGene00061604" CDS join(131981..132109,132157..132436,133141..133666, 135126..135656,135707..135973,136564..136681, 136736..137080,137128..137295,137339..137440) /gene="Cre-rcq-5" /locus_tag="CRE_13262" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain); contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR004589 (DNA helicase, ATP-dependent, RecQ type), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal); coded for by the following C. remanei cDNAs: DR780601" /codon_start=1 /product="CRE-RCQ-5 protein" /protein_id="EFO94352.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR004589" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00270" /db_xref="PFAM:PF00271" /db_xref="WormBase:CRE13262" /db_xref="WormBase:WBGene00061604" /translation="MTSNKRNLETITIDDSDEEDQKEPIAKKPTTSNYSAWAEIFNKK KAEASVVSAAEKAKKDAEKEKQRQKLKDAINERKRREALLENSKKAKQESPKVIKTEK PVKKEEKFEKSDSPGPSYSQPTDTQDSQDSSDFVANPLAVGTGERLIRGQDIIERRDK VFLELFLHKKYRSRLQMQAINCILKRKCDVYVSLPTGAGKSLCYQLPSIVHGGVTVVV SPLIALMKDQISSLRRKGIPCETLNSTLTTVERSRIWRELGKEKPTIRMLYITAEGCA TEGIKKLLGDLTKRDVLRYIVVDEAHCVTQWGHDFRPDYLTLGSLRDVCPGVPWVALT ATANAKAQDDIAFQLKLRNPESFKAGTYRDNLFYDVCMRDHLPSAPENHMASFITKCL TVDIKTSTPSLTKNEKSGRAQNKKTFVGSAIVYCRSRNECEQVAKMLVIAGIPAMAYH AGLGKKDRNDVQEQWMSNEIPVVAATVAFGMGIDKPDVRAVIHWSPSQNLAGYYQEAG RAGRDGKRSYCRIYYSKQDKNALNFLVSGELAKLREKAKKNNAEGEKAAMQIKSIQTG LQKMLDYCESAKCRHVSIATFFDDTDCRPCKTNCDYCRDPTKTTRNAEAFVNSEESTG RSMFRRPGTSSGESGFDAIYGGGKRGGETEDELLSSSTSSKDAMDRMEREEARRVRGV IDSEFAKRRRQAPSVPAAARGAGASRRVEPAMDVSVIKPEQTVIKNVSLESRENWVRY LLRALESNWIVAGPPAGTTIKQCAEQLEYGMYSISKNETTYKNKCGHKLAEIKKLTMK NAPFHYTNTTIEQNGFVKAADLT" gene complement(<138082..>139620) /gene="Cre-tbb-2" /locus_tag="CRE_13358" /db_xref="WormBase:WBGene00061602" mRNA complement(join(<138082..138272,138365..138551, 138599..139404,139455..>139620)) /gene="Cre-tbb-2" /locus_tag="CRE_13358" /product="CRE-TBB-2 protein" /db_xref="WormBase:WBGene00061602" CDS complement(join(138082..138272,138365..138551, 138599..139404,139455..139620)) /gene="Cre-tbb-2" /locus_tag="CRE_13358" /note="contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain), PF03953 (Tubulin/FtsZ family, C-terminal domain); contains similarity to Interpro domains IPR002454 (Gamma tubulin), IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR008280 (Tubulin/FtsZ, C-terminal), IPR013838 (Beta tubulin, autoregulation binding site); coded for by the following C. remanei cDNAs: DR776692, DY527509, DT935705, DR780466, DY527026, DY529641, DR407178, DR780525, DT933551, DT935003, DY525972, DY528944, DR406854, DT934213, DY528175, DT933342, DT936040, DR779421, DY527810, DT933372, DT934357, DR408608, DR409343, DT936034, DY529350, DY529119, DR778454, DR780410, DR409311, DY527061, DR409178, DT934369, DY527024, DY527559, DR778124, DT934620, DR408935, DY526416, DT935819, DR778371, DR782567, DR780907, DR409734, DY525958, DY527999, DR779997, DR406479, DR780470" /codon_start=1 /product="CRE-TBB-2 protein" /protein_id="EFO94412.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR002453" /db_xref="InterPro:IPR002454" /db_xref="InterPro:IPR002967" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR004057" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR013838" /db_xref="PFAM:PF00091" /db_xref="PFAM:PF03953" /db_xref="WormBase:CRE13358" /db_xref="WormBase:WBGene00061602" /translation="MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA KGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP DRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLT NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAK GTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQ NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRK AFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDDAEGYADGEAGETYEEQ" gene <142088..>144343 /locus_tag="CRE_13263" /db_xref="WormBase:WBGene00061600" mRNA join(<142088..142190,142233..142371,142437..142541, 142601..142712,142989..143174,143370..143530, 143719..143985,144292..>144343) /locus_tag="CRE_13263" /product="hypothetical protein" /db_xref="WormBase:CRE13263" /db_xref="WormBase:WBGene00061600" CDS join(142088..142190,142233..142371,142437..142541, 142601..142712,142989..143174,143370..143530, 143719..143985,144292..144343) /locus_tag="CRE_13263" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8Q8X8" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94516.1" /db_xref="WormBase:CRE13263" /db_xref="WormBase:WBGene00061600" /translation="MDRKFNSDEQWYISPLIELKNVKEDLLDGREAGEVTIDREVEEK EGKSEKDLEMEMWQTSMACEEGVTEEEAAAAIEEVSNLDMFLVRPVDVSTRRLEDMKG DEQFLEKSPLFTHKSVIKRDEFLKTSRQRKSQYVTSLKYDKYLMKGGPNTNVYSPQCS LTEKCEDDIVMIVDAMTPYNRILLSNELRSSRLLKPQMKFLVRGDSLLSDLRQRLSCQ SDTIVPLENGSELEPQNFDNSTAERFPSSFIFIHDTFYVDSSAENAKDISFPIRRFME QKEIFDPVDAKHMEGVKIIDLKLRLGQPYIFQHSGNCEHLLIFHDLRLLHETDPRGIE KYPFVLFEKGNERKCEMCRKGHVERKTRLGRPRTPNYLKF" gene complement(<144552..>145768) /locus_tag="CRE_13359" /db_xref="WormBase:WBGene00061601" mRNA complement(join(<144552..144917,144972..145453, 145501..>145768)) /locus_tag="CRE_13359" /product="hypothetical protein" /db_xref="WormBase:CRE13359" /db_xref="WormBase:WBGene00061601" CDS complement(join(144552..144917,144972..145453, 145501..145768)) /locus_tag="CRE_13359" /note="contains similarity to Brugia malayi P40, putative.; TR:A8NF47; coded for by the following C. remanei cDNAs: DR409614, DY529000, DR407821, DR780759, DR408554, DR407477, DY529419, DR778587, DR781200" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94482.1" /db_xref="WormBase:CRE13359" /db_xref="WormBase:WBGene00061601" /translation="MPNPPPKEDTWAFQPIGAPFPPSPVKCMGEQNMYVALWYKHGKP IHGRSWNNGGVVECSFPYKEAELTTKAQLEGQIQVLQYLGDHNNQGFWYEWIKYKDRI EKLDDKHQLVRCGDSFPIFWKRAEGNLLGYVDNKTEDAWFSFNGKVIKQTGPQLNDMY IITRNCVGGPPHCPCAACGAAPPPPKPVPRVERDEWMDIREGDPWPTRTLVKALDKTL DTLPGVNPDQYVALWYMQGEPVMGRVWNEGGKIAANFSWFNNEYCKNVGSIQLLVHLP DSVRGFDYGWIPFPEAAKFGDKVWHPVHVNNHKGDISVGVVNVAGGKQILAKVDVRNE KYGYGYQGKEHSATAKNCADNTIVLCRKAKAGYKLDG" gene <147478..>151553 /locus_tag="CRE_13264" /db_xref="WormBase:WBGene00061599" mRNA join(<147478..147804,147875..148157,149469..149978, 151279..>151553) /locus_tag="CRE_13264" /product="hypothetical protein" /db_xref="WormBase:CRE13264" /db_xref="WormBase:WBGene00061599" CDS join(147478..147804,147875..148157,149469..149978, 151279..151553) /locus_tag="CRE_13264" /note="contains similarity to Brugia malayi General transcription factor III polypeptide 5, putative.; TR:A8PQW1" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94350.1" /db_xref="WormBase:CRE13264" /db_xref="WormBase:WBGene00061599" /translation="MDKKMEDFLNFVQPKKEEPKQFILIKYPGIVQDVDKALQTMGGL QLISQSHLNNHSLELSHTPNNPYTSRIMAERKTQDNVSSGTLHLVMKVRRKKSNPKKM KTKFLGLINTVYSFDVMCDFQYLPLKKRIGTDGFDDLIPRLIPTDMSSALSWWDQTQS LPTPLFLPPYQFSRYLTPSTKILGRETDHTEKTRRAVRSGYGQNLRVERKALSVTVMA NDEFPLEPSTEAVEEAHFRCKHDEPHRLLKELFNERPMWTRIGLLYRTRIDDSLLRSI LQKYAFYIQSGPWGRLWCRFGYDPRKDKEGGLYQTLMVSFRQHGSIPERQRLKVSSDR AQTINQNGDANGKIQSLLFAARSPTLRKRTARNVKPIFSEPVSYTYEQGKLPRVRQMW YCVMDVQLPKAVEELVGMVETQAMPTEEEVREKGWLPPNLLDRIRDLIKEDVAKTSKE LEGSMSMNGEEDFI" gap 150478..150487 /estimated_length=10 gene complement(<151842..>154953) /locus_tag="CRE_13360" /db_xref="WormBase:WBGene00081211" mRNA complement(join(<151842..151963,152010..152099, 154875..>154953)) /locus_tag="CRE_13360" /product="hypothetical protein" /db_xref="WormBase:CRE13360" /db_xref="WormBase:WBGene00081211" CDS complement(join(151842..151963,152010..152099, 154875..154953)) /locus_tag="CRE_13360" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94447.1" /db_xref="WormBase:CRE13360" /db_xref="WormBase:WBGene00081211" /translation="MSVAMKCFYLLVLLAVMTVATWQNEEDTGCAGAEGCDEETNNKF ALLFRQMLAKQREANVDCTVTEDCPESFDCVSGKCRSMGPRRTKMFNLYSRW" gene complement(<155550..>165663) /gene="Cre-hum-5" /locus_tag="CRE_13361" /db_xref="WormBase:WBGene00061598" mRNA complement(join(<155550..155724,156442..156587, 158199..158423,158475..158888,159912..160715, 160829..160964,161009..161148,161941..162186, 162241..162885,163370..163475,165563..>165663)) /gene="Cre-hum-5" /locus_tag="CRE_13361" /product="CRE-HUM-5 protein" /db_xref="WormBase:WBGene00061598" CDS complement(join(155550..155724,156442..156587, 158199..158423,158475..158888,159912..160715, 160829..160964,161009..161148,161941..162186, 162241..162885,163370..163475,165563..165663)) /gene="Cre-hum-5" /locus_tag="CRE_13361" /note="contains similarity to Pfam domains PF00612 (IQ calmodulin-binding motif), PF06017 (Myosin tail), PF00063 (Myosin head (motor domain)) (2)contains similarity to Interpro domains IPR010926 (Myosin tail 2), IPR000048 (IQ calmodulin-binding region), IPR001609 (Myosin head, motor region)" /codon_start=1 /product="CRE-HUM-5 protein" /protein_id="EFO94362.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR001609" /db_xref="InterPro:IPR010926" /db_xref="PFAM:PF00063" /db_xref="PFAM:PF00612" /db_xref="PFAM:PF06017" /db_xref="WormBase:CRE13361" /db_xref="WormBase:WBGene00061598" /translation="MSYGGHDPKGYGVEDLVLLSTIDLRNVVQNLQLRFQKGRIYTYI GEVLVAVNPYRQLGIYEKNTVDQYKGREIYERAPHVFAIADAAYRSMKRFGRDSCIVI SGESGAGKTETSKIIMKYLAAITNVRQQGEIERVKNVLLRSNCILEAFGCAKTNRNDN SSRFGKYMHINFDYDGDPVGGNISNYLLEKSRVVRQQEGERNFHVFYQLVNGGDDGLL RQFGVAKDAKQYYFLNQGKSQKVRKSVCLKILSQVFRSRLSMTPEISQKFRLHSDRFT LLISKMLRMWSVIAALIHLGNVRFIDANNSSGAVHISEKAALQNAARCLNVTPDELSK SLSSQVVAAHGDIVKKQHDVNAAYYTRDALAKALYERLFSWVVSKINEAISVQNNSRY SKSHVIGVLDIYGFEIFGTNSFEQLCINYCNEKLQQLFIELVLKQEQEEYEREGIKWV KIDYFNNKIICDLVEVPRTGILSILDEACASIGNVTDKVFLGELDKKLKGHQHYTSRN LKQSDKSMGFEEFRITHYAGDVTYSVMGFMDKNKDTLFQDLKRLLYHSKNRLIKSLFP DGSKSMAEVNRRPPTAGFLFKNSMSELVKQLAQKEPHYIRCIKPNEEKSSNIFDLERV EHQVRYLGLLENVRVRRAGFAHRMPYDRFVNRYKLICQQTWPNPRRGQQLRDSCMQIL ESAGMAQDCVQGKTKIFIRSPQTVFRMEELRTEQLPNVVTFLQKMVRGVQARERYRRM VAVRRIIGAYRRYKLKSYIWQLINAFRCVKIIFSQVLGSFSRDVRRMKDLGKSIRWPT PPLVLAQFVSRLRVMHQRWRAATILARIPPHLRASLTQKIAAFEVFNNKKENWGYPRM WRGDYLSQQEELDLPTSVSTYQDGIQALRQSHPFGKVLFSTYIQKYNKFNKSSLRVLI VTDRFVAKLETKKFKLLKEPIPLQSISRISVSAESNGLFVIHVGDNDIVGCAKNTKNE ERVGEMIGTLLAHYDKITMRRPPIIIQSAVVCILGGKTKTIRVFDAENNNIPPVFKKN GNDVDLICHQLTAVA" gap 168216..168630 /estimated_length=415 gene <175642..>176996 /locus_tag="CRE_13265" /db_xref="WormBase:WBGene00061597" mRNA join(<175642..175853,175901..176101,176151..176298, 176346..176574,176623..>176996) /locus_tag="CRE_13265" /product="hypothetical protein" /db_xref="WormBase:CRE13265" /db_xref="WormBase:WBGene00061597" CDS join(175642..175853,175901..176101,176151..176298, 176346..176574,176623..176996) /locus_tag="CRE_13265" /note="contains similarity to Pfam domain PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar); contains similarity to Interpro domain IPR000571 (Zinc finger, CCCH-type); coded for by the following C. remanei cDNAs: DR780355" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94506.1" /db_xref="InterPro:IPR000571" /db_xref="PFAM:PF00642" /db_xref="WormBase:CRE13265" /db_xref="WormBase:WBGene00061597" /translation="MYCFPFYLNYLFFPLRLRNLYSIFILFPGFQTLTMIEKSVPQSS AVNLNELMAQTASLLAVREQQRKEIADNKLALSTLPPSNHLTPYMDPRRRGERRMQKP ESYKTVICQAWLESKTCTFAENCRFAHGEEELRPSFIEPRQNNKYKTKLCDKYTTTGL CPYGKRCLFIHPDNGPNAYIRSDKLYEVSQRHALADLRDQMEHHIMTGGQSTVPDLSK VTQSLDMLPRPSTPDEPAAKMPLGPTPVSTRGPKYELPPKNVPEEEAGNLPPSCWRPF DPSSFFSLDNLNMASRPVSPFESMLIEAAATAGVLPFTMIGKQSTPGGVSGYSSAGSS AGTPYQDPDTSPESLLAKSVINPLLIPQREELYSPMLGFDKLAEEMAKQFELW" gene <177597..>178949 /locus_tag="CRE_13266" /db_xref="WormBase:WBGene00061596" mRNA join(<177597..178226,178295..178492,178536..>178949) /locus_tag="CRE_13266" /product="hypothetical protein" /db_xref="WormBase:CRE13266" /db_xref="WormBase:WBGene00061596" CDS join(177597..178226,178295..178492,178536..178949) /locus_tag="CRE_13266" /note="contains similarity to Pfam domain PF00956 Nucleosome assembly protein (NAP); contains similarity to Interpro domains IPR000886 (Endoplasmic reticulum, targeting sequence), IPR002164 (Nucleosome assembly protein (NAP))" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94413.1" /db_xref="InterPro:IPR000886" /db_xref="InterPro:IPR002164" /db_xref="PFAM:PF00956" /db_xref="WormBase:CRE13266" /db_xref="WormBase:WBGene00061596" /translation="MPSCFFPIVYFIVLSKLTYRFGFFLSNHRFSGKMSDEPAAKRSR IGDEPAAERAKNADEFPNLRSDVVGAVKEKLIELDAVQHQLDVMSEKAAEEVLRVEKA FNKKRMPIYEKRKNLTTKIDNFWQTAFLNHHLLSTAIPEEQEDLLGALRDLEVQEFED LRSGFRIVMTFDQNEYFENTVITKSYHLQSETPSTQITEIKWRENKQPPPKPEDDSAI TFLEWLNYAAPPDSDEIAEVIKDDLFVNPLQYYMMPDMQEVDVDEMESFLNEDRGVDE NGQPILGFSRPVDLSTIMGTDDSDELGEEAVEEMDDEEKVDDDEVEDGEDEEEGEIEG ESVDDEDDDGEEGALEEDEDEEEAEGEGEGKAEGEGEGEADDEVEVEGDGEGEGEEGE GGDEENDAEKVAESRGPSEEL" gene complement(<179637..>181274) /gene="Cre-nlp-10" /locus_tag="CRE_13362" /db_xref="WormBase:WBGene00061595" mRNA complement(join(<179637..179746,180405..180545, 180747..180836,181217..>181274)) /gene="Cre-nlp-10" /locus_tag="CRE_13362" /product="CRE-NLP-10 protein" /db_xref="WormBase:WBGene00061595" CDS complement(join(179637..179746,180405..180545, 180747..180836,181217..181274)) /gene="Cre-nlp-10" /locus_tag="CRE_13362" /codon_start=1 /product="CRE-NLP-10 protein" /protein_id="EFO94444.1" /db_xref="WormBase:CRE13362" /db_xref="WormBase:WBGene00061595" /translation="MWYIALLLVVVATSVNAQKADDESIVFLVRVPMEEIEDNSSVES YYHPRDIFNKRAIPFNGGMYGKRSTMPFSGGMYGKRSGPIFAERRAAIPFSGGMYGKR SLSSATQSYANNENQIKRGAMPFSGGMYGR" gap 198756..198765 /estimated_length=10 gene <200152..>201510 /locus_tag="CRE_13267" /db_xref="WormBase:WBGene00061594" mRNA join(<200152..200468,201088..201340,201385..>201510) /locus_tag="CRE_13267" /product="hypothetical protein" /db_xref="WormBase:CRE13267" /db_xref="WormBase:WBGene00061594" CDS join(200152..200468,201088..201340,201385..201510) /locus_tag="CRE_13267" /note="contains similarity to Homo sapiens 14 kDa protein; VG:OTTHUMP00000024599" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94390.1" /db_xref="WormBase:CRE13267" /db_xref="WormBase:WBGene00061594" /translation="MCITKKATKKTTEHKDSSEDAKKKAAQKKPTKKFKMPMFAKKKK SAEPKVEEQKIEKPEEPEEPPKSVKEEEQEVDKREEDAKGLDQAKVEVKPKRPSVFRP NCANLAGLSGATKKKGNKYKFGQIDREELSVTLNKKSPKKLKHFQINNDKTEFLENAQ LTKLMSHADMKALMNGQNAPGENLDDPNCQDTVEEVDSEMQDIAFSPLLAPIPKEEDK QLHALIHPTDQKA" gap 202892..203100 /estimated_length=209 gap 206478..206668 /estimated_length=191 gap 208016..208025 /estimated_length=10 gene <219005..>221209 /locus_tag="CRE_13268" /db_xref="WormBase:WBGene00061593" mRNA join(<219005..219214,219259..219386,220150..220258, 221105..>221209) /locus_tag="CRE_13268" /product="hypothetical protein" /db_xref="WormBase:CRE13268" /db_xref="WormBase:WBGene00061593" CDS join(219005..219214,219259..219386,220150..220258, 221105..221209) /locus_tag="CRE_13268" /note="contains similarity to Pfam domain PF03226 Yippee putative zinc-binding protein; contains similarity to Interpro domain IPR004910 (Yippee-like protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94483.1" /db_xref="InterPro:IPR004910" /db_xref="PFAM:PF03226" /db_xref="WormBase:CRE13268" /db_xref="WormBase:WBGene00061593" /translation="MRRKKIVYNYFSLLLLSPLSFSCFQFFLSLFLFTQFQIISYSNV PRFAEMMKVLENSSKHNTPKKQKTFQHYLPAGDRCYSCIHCRANLAAHSELISKSFQG SQGKAYLFNAVVNIGCGPAEERVLLTGLHAVADIYCEICKTTLGWKYEHAFESSQKYK EGKFIIELAHMVKDNGWDEQHDS" gene <222423..>226466 /locus_tag="CRE_13269" /db_xref="WormBase:WBGene00061592" mRNA join(<222423..222520,224443..224606,225240..225344, 225395..225497,226244..226355,226416..>226466) /locus_tag="CRE_13269" /product="hypothetical protein" /db_xref="WormBase:CRE13269" /db_xref="WormBase:WBGene00061592" CDS join(222423..222520,224443..224606,225240..225344, 225395..225497,226244..226355,226416..226466) /locus_tag="CRE_13269" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94449.1" /db_xref="WormBase:CRE13269" /db_xref="WormBase:WBGene00061592" /translation="MEKKKTLMTKISTTTSGSISGSKSKEEEVELGKWTPSTSNILEQ IEHVPESTIEEEVRTSTLMGFSAFLIGIKSVTLIVYLVLLIVSIILLDNSFFFTILAF GCAELVLIIITIYHGIKPTLKVVFAMLGFELTLSLVKLVFAIVLMAKDGGEDCSVDHP CSIMNISVKERFGLFFFILFTAFADGLTALLTIANSPQMHEFEMGDEYLF" gene complement(<227526..>227920) /locus_tag="CRE_13363" /db_xref="WormBase:WBGene00081192" mRNA complement(join(<227526..227822,227870..>227920)) /locus_tag="CRE_13363" /product="hypothetical protein" /db_xref="WormBase:CRE13363" /db_xref="WormBase:WBGene00081192" CDS complement(join(227526..227822,227870..227920)) /locus_tag="CRE_13363" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94342.1" /db_xref="WormBase:CRE13363" /db_xref="WormBase:WBGene00081192" /translation="MRPWNAIHVPVCKICPWDIHNREECTEHYEENEKERARLEHIEE IEEIRYVITFEDWRNALWGEPLAVPKEENKTKKKFGKIWGKIKTKCRKIINKLFHVFR YLLGTVETRLLLC" gene <229188..>230996 /locus_tag="CRE_13270" /db_xref="WormBase:WBGene00061591" mRNA join(<229188..229195,229252..229724,230725..>230996) /locus_tag="CRE_13270" /product="hypothetical protein" /db_xref="WormBase:CRE13270" /db_xref="WormBase:WBGene00061591" CDS join(229188..229195,229252..229724,230725..230996) /locus_tag="CRE_13270" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94434.1" /db_xref="WormBase:CRE13270" /db_xref="WormBase:WBGene00061591" /translation="MTSLKKSNPTEVHISTSRDLVQRTLVLRNTTGKDFILKLISSNE AILFPTNVFRFPPSSHRVIQFRVNSSKISQWDRTKLTIKGFVLPIYAKNLKQFIDQKT VAGTSCQEAFSLSVMFTEQFSAPQTIINLPGSATCIESSDHPVDVEELDTLTAINIEK DVVTAAPIGSMTGFVEEYKRGQQNKGCWLTNYVCGGPEKPLEKQSMRSRRSASRSGGS AKSCRTQASRKKSKEVNVCLEATPCGGSTIQT" gap 233183..233192 /estimated_length=10 gene <238546..>244694 /locus_tag="CRE_13271" /db_xref="WormBase:WBGene00061590" mRNA join(<238546..238635,243189..243192,244423..>244694) /locus_tag="CRE_13271" /product="hypothetical protein" /db_xref="WormBase:CRE13271" /db_xref="WormBase:WBGene00061590" CDS join(238546..238635,243189..243192,244423..244694) /locus_tag="CRE_13271" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94427.1" /db_xref="WormBase:CRE13271" /db_xref="WormBase:WBGene00061590" /translation="MTQVVFTLELMKPWYSIQLPCEPNCEICSWKDVVTAAPIGSMTG FVEEYKRGQQNKGCWLTNYVCGGPEKPLEKQSMRSRRSASRSGGSAKSCRTQASRKKS KEVNVCLEATPCGGSTIQT" gap 239568..239948 /estimated_length=381 gap 242030..242039 /estimated_length=10 gene complement(<246354..>256692) /gene="Cre-msi-1" /locus_tag="CRE_13364" /db_xref="WormBase:WBGene00061589" mRNA complement(join(<246354..246479,248164..248276, 249356..249497,249622..249734,250391..250532, 255057..255137,256100..256227,256530..>256692)) /gene="Cre-msi-1" /locus_tag="CRE_13364" /product="CRE-MSI-1 protein" /db_xref="WormBase:WBGene00061589" CDS complement(join(246354..246479,248164..248276, 249356..249497,249622..249734,250391..250532, 255057..255137,256100..256227,256530..256692)) /gene="Cre-msi-1" /locus_tag="CRE_13364" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="CRE-MSI-1 protein" /protein_id="EFO94438.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CRE13364" /db_xref="WormBase:WBGene00061589" /translation="MTTTSTGVSLREQSPQDVDGHEEARLNADSDDGSHGSQDPGKMF IGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNAR EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDLKQYFETYGKVEDAM LMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNK SRAAAARNLYGMPPETLLAYAQYLPRFGGNLMYPGFGNGFGFVTFDSDEVADKVCEIH FHEINGKMVECKKAQPKEYSTTCFGRLFGSLNPRWLNQPSPTPIRHRQSLQSEQRSYN T" gap 247042..247822 /estimated_length=781 gap 248716..248725 /estimated_length=10 gene complement(<270411..>271991) /locus_tag="CRE_13365" /db_xref="WormBase:WBGene00061588" mRNA complement(join(<270411..270674,271770..>271991)) /locus_tag="CRE_13365" /product="hypothetical protein" /db_xref="WormBase:CRE13365" /db_xref="WormBase:WBGene00061588" CDS complement(join(270411..270674,271770..271991)) /locus_tag="CRE_13365" /note="contains similarity to Pfam domain PF00412 LIM domain; contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94347.1" /db_xref="InterPro:IPR001781" /db_xref="PFAM:PF00412" /db_xref="WormBase:CRE13365" /db_xref="WormBase:WBGene00061588" /translation="MSTCPVPLTKSSVIPVSSDLPIPTEKMDRSIDRRQCGQCHQSIG SEALVAMNRLWHPDHFTCSSCKRPIKQTFQAADNHAYCVQCFAQKYNPKCAGCMETLV DTCLLALDRHWHPRCFTCSSCNRPLPNGEFYLVDDKPYDLDCHWAKRLEKREHMEKGE R" gene complement(<272568..>275317) /gene="Cre-glb-11" /locus_tag="CRE_13366" /db_xref="WormBase:WBGene00061587" mRNA complement(join(<272568..272682,272733..272852, 273793..273984,274033..274299,275241..>275317)) /gene="Cre-glb-11" /locus_tag="CRE_13366" /product="CRE-GLB-11 protein" /db_xref="WormBase:WBGene00061587" CDS complement(join(272568..272682,272733..272852, 273793..273984,274033..274299,275241..275317)) /gene="Cre-glb-11" /locus_tag="CRE_13366" /note="contains similarity to Interpro domain IPR012292 (Globin)" /codon_start=1 /product="CRE-GLB-11 protein" /protein_id="EFO94415.1" /db_xref="InterPro:IPR012292" /db_xref="WormBase:CRE13366" /db_xref="WormBase:WBGene00061587" /translation="MGNTKSTESIPKKSTRRKSATTPSTSSSSRPSVSSQGNRKPLLS ISQRQIIKGCVDNSKDDLGERIFRRVLEKRDDFKQFIDNLSKAQRYENSNYLKQFLLG IVESLTDIDEINRISEEYGCNHVQFRLYGFKPDFFAATADAVATECTFLDQAAHLTSE TATAWYLLTTHVFSAVRDGYYAELRRQRKCSNAFRARVSVDVVSTGTDDGTSLSSATR RSNSPQEEIAEKFEQKSNQTDDNDNEPSGNFLSPPQIY" gap 285362..285950 /estimated_length=589 gene complement(<287648..>291605) /locus_tag="CRE_13367" /db_xref="WormBase:WBGene00061586" mRNA complement(join(<287648..287733,287857..288050, 288701..288799,288849..288960,289008..289186, 289677..290236,290755..291440,291560..>291605)) /locus_tag="CRE_13367" /product="hypothetical protein" /db_xref="WormBase:CRE13367" /db_xref="WormBase:WBGene00061586" CDS complement(join(287648..287733,287857..288050, 288701..288799,288849..288960,289008..289186, 289677..290236,290755..291440,291560..291605)) /locus_tag="CRE_13367" /note="contains similarity to Pfam domain PF05327 RNA polymerase I specific transcription initiation factor RRN3; contains similarity to Interpro domain IPR007991 (RNA polymerase I specific transcription initiation factor RRN3); coded for by the following C. remanei cDNAs: DT934265, DR780500" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94499.1" /db_xref="InterPro:IPR007991" /db_xref="PFAM:PF05327" /db_xref="WormBase:CRE13367" /db_xref="WormBase:WBGene00061586" /translation="MKRSTASAPSLSPKHESDVKKVKLEDVKPPTTSNPPNAPTGREI IENYLKGDVTSAVLYRKICNALETFDQWESEAPKLQLLEQFLGIADAMEARTDVLVKR LLNLRWDKIPSSVIEKFRTFLCELAIRHLCFTEDVYNSVIERLVPQISVNDETRIVTF VLTEEKQNEHFEMAHYIISSVLRCFPLSAKTLLKCAKKAMPHVTRPAVTVSGYMRNLI LMQKYIPSSISKDLWETMFDRLARDDAHNWRCEQNEEENKSPRLFALNDDILIEEIVE STNNSEDVTPQLLEQRKGEQMLQYLDAVCTDVIAFIRDSEGIDRQESEEKGEKIDEKW LTSFKFSGDKVLAADKLFDTFLEVLESTMLNATHVQYISFVWLYFGSLKAEYEQKVLE HLWQVTIRMPRAPADARKSQGAASYLAAFLARAKYVKKNTAFTWLEEIYTWLRHYVDQ FGSGSSQILPGLQRHGTFYAVSQAFFLVFAFRYKEFVKDQEMLETIRRWGVGRVVHSP LEPLRFVSKPVARCFSAITRSLQLVYCNHVIPIEEVQRPFDDMFPFDGFHLKVSSQFM TPLMRKFSPLAEDLSTLTKALCWNAVAGATAEKSEKSAETVSSSEGLDFLDEDDIVMS TGFRERTFSCGQSSLINYSATPGLKTFNV" gene <296069..>301203 /gene="Cre-pxd-1" /locus_tag="CRE_13272" /db_xref="WormBase:WBGene00061585" mRNA join(<296069..296126,297560..297798,298026..298178, 299067..299228,299282..299366,299435..299689, 299739..300220,301138..>301203) /gene="Cre-pxd-1" /locus_tag="CRE_13272" /product="CRE-PXD-1 protein" /db_xref="WormBase:WBGene00061585" CDS join(296069..296126,297560..297798,298026..298178, 299067..299228,299282..299366,299435..299689, 299739..300220,301138..301203) /gene="Cre-pxd-1" /locus_tag="CRE_13272" /note="contains similarity to Brugia malayi Tumor endothelial marker 3, putative.; TR:A8P5S0; coded for by the following C. remanei cDNAs: DT936857" /codon_start=1 /product="CRE-PXD-1 protein" /protein_id="EFO94515.1" /db_xref="WormBase:CRE13272" /db_xref="WormBase:WBGene00061585" /translation="MRSTSISLLVVFLVWRITEAQNIEVSRERVPEQIRYSEPSTAGP NTEEEFVPLSPVRKVRAAPIPKPVSQDDRWTAEDEEEIDPATATVPSDVEVKQDSVDH HYYQAETYVGDLEKLKKYWVNVEQFMKKPKTIGNTSHPLLSQSYRRAVGARLQFKFPF YGHKMANLTIATGGFIYIGDHTHNWLAATQYIAPLMANFHTYLNNSNIVYADDGESFV VEWRNVQLKEDKEKNAFTFQTILHKNGDIVFIYKDVPYDISNISDANHPVKLGISDAY MFKHNLHQSAAPKRVIYEYHRIELATDKIVSNTVVILKALPTCISFDTCDSCTNATLP HFNCLWCHAKKSHGGPFCTDESGLHRRRQQWFEGNCYQRSKALYCDADDENETYDDED YVKAQLFPDDKSNGESNVDVEKMKTSDKGTKSAMLDEWKKKVKDEKEAKGGVATLTMI VLVLLCFVAWLAYAYYYPHTTSGQLLIKYRPSRWHVPNSHVRYSASVHM" gap 296707..296716 /estimated_length=10 gene <301616..>303667 /locus_tag="CRE_13273" /db_xref="WormBase:WBGene00081196" mRNA join(<301616..301846,302612..302704,302752..302895, 303253..303518,303565..>303667) /locus_tag="CRE_13273" /product="hypothetical protein" /db_xref="WormBase:CRE13273" /db_xref="WormBase:WBGene00081196" CDS join(301616..301846,302612..302704,302752..302895, 303253..303518,303565..303667) /locus_tag="CRE_13273" /note="contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94368.1" /db_xref="InterPro:IPR000609" /db_xref="PFAM:PF02118" /db_xref="WormBase:CRE13273" /db_xref="WormBase:WBGene00081196" /translation="MDSPDILKPASVDAPFFIDCDTSYDSTIEFSKYLCQVIYLVPAL ILHLALLRVLLYTHRKEYLDNSYFFIFSMDCVVPYYLRVAKLCIQIFATINRMTCVLS PLGYSRMWKCFTPFMVVIVVLSPFTVIWNILISRPFVINIYGGISFGYLRRFEWASLS LFFLIIHLVSILITLISTAITLTYLCRLSERIKSIERTLCSTSICISVCFILNSCFQI YFVFVRDKYFKTVYAFQYIAFDILILATPMILLIYSKQLRSQVFGFCHKARVISVGSG TS" gene complement(<305036..>310603) /locus_tag="CRE_13368" /db_xref="WormBase:WBGene00061584" mRNA complement(join(<305036..305138,305184..305279, 305531..305680,305932..305997,306046..306123, 306171..306982,307030..307129,307174..307281, 307901..307993,308638..309410,309457..309550, 309594..309713,310548..>310603)) /locus_tag="CRE_13368" /product="hypothetical protein" /db_xref="WormBase:CRE13368" /db_xref="WormBase:WBGene00061584" CDS complement(join(305036..305138,305184..305279, 305531..305680,305932..305997,306046..306123, 306171..306982,307030..307129,307174..307281, 307901..307993,308638..309410,309457..309550, 309594..309713,310548..310603)) /locus_tag="CRE_13368" /note="contains similarity to Saccharomyces cerevisiae GPI-anchored cell surface glycoprotein (flocculin) required for pseudohyphal formation, invasive growth, flocculation, and biofilms; transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p); SGD:YIR019C" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94370.1" /db_xref="WormBase:CRE13368" /db_xref="WormBase:WBGene00061584" /translation="MASWMDTKNYNNNLAEENAGSFHDLKKWFVCTYKKQHGRRECGF YGTLPAINEHFAEHTECYEFRCRKCDNLFVGQMEFSKHKGKEKCLAQEADLIIVFNDY GLKKTDAFLRSLHIREANEEEKGRIGFNKDSQFYDWTKGPKNRYGMSWKQFRIYQETV TYYGHFSNGVPFFPAPPESSNCHFTFPILPPPPPPSAVPSTESDHSSRDQSTGIDPQY LIDEWHVYPEPPSETSETRPISPAAAKDSVESTPGYGTRNGSPLGSEHQSSPQHNDDV NVLEKRTLSIPQFGTSEIALEQKRKRPAPGSLRELLQNVADSGVSSSTEPRPQSPMDP PHGTVRRLSIERFQSGPRLHFSPALLLSTAALSSSLNSSGLSEHRSSQEILFQCTIPF GTTDTVCEFIGNTSEMEFHRTKHEHSVFECMQCWEKFCLKKDIKNHQEKQWLKCYRGK WTAYMVTSVVSIDDYPAVKGMYLQEYEGPRTVWKGPIDERDNKQWQKKNTEMDSDISS YNRRFGATHSTPRYNEPSTTSQTLENIYTGSKRKVLLPTLPSLPQVSQAVPTVVAPEA LQPPPPSSDDSMEVSPEQPDFEMSPEYDPGTYDPIPVSPTYGSPMDIVVSPAPTHKET RDEYPPIASSQLLTPSRSSSPESIKGDSVPSSSILKKADVWNKSKRQADMPPAKKRRQ ELEKTDILGSIMKSITRTQSTDQPKIMKKTYEQRDPKGLPRPICPSEKMLKRSISNST AFASMNLSDKREAQSTSCASRRQNIERAPESHMFEDRSLTKQLIPPTSRNDEIPSTPS ASEIPVPPTKNVAFRQESAQQPTKADEIQTTSNSSQSPVPPKKLKKKRLPPLDMSRRA YRTGKPVPYYESDSDSDEDKYITLSD" gap 314828..315099 /estimated_length=272 gene complement(<315289..>320091) /locus_tag="CRE_13369" /db_xref="WormBase:WBGene00061583" mRNA complement(join(<315289..315422,315779..316985, 317068..317744,317789..318409,318464..319643, 319692..319821,319834..319953,320063..>320091)) /locus_tag="CRE_13369" /product="hypothetical protein" /db_xref="WormBase:CRE13369" /db_xref="WormBase:WBGene00061583" CDS complement(join(315289..315422,315779..316985, 317068..317744,317789..318409,318464..319643, 319692..319821,319834..319953,320063..320091)) /locus_tag="CRE_13369" /note="contains similarity to Chlamydomonas incerta Plus agglutinin (Fragment).; TR:Q58NA5" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94491.1" /db_xref="WormBase:CRE13369" /db_xref="WormBase:WBGene00061583" /translation="MHYTMEKLKITEYESKRNYYMCNFHTGGKEGHCTFVGTLSSVNE HFSVHTFLNFFNFYFFSGVYLYHCWACESYFSERCYLIGHLGKKRCDIRNSYLIENRY EDEEFHRKARNVFIRAISKEEYSEAAERTNSLKNNDFLPSYFARDPPYKTAKRAHYPD FVRRSQLRSRTTEMAQAAQRHHKKEPAEHRSIHQDLQPMDTSPIEPDFPEDGLQPPDY HPANRNVSTGFVSSELTLRLKPIQRNVHRSQSVTLNHAVIEEVSLNVHLDERPVEQSA SINNVTISQALQDSLSNSNEMGPEFGRLREIVRMIVREEVNQTTTNQHKTLVKDRPPP NATSVQPVPVVTPAPVQSVQSNPTSVQQYPAEPLVSAQIIAQIPLPAPKPVPQQPAQS HLQQNSSEHPAPPRNVAQPPVPAPKPVPQQPAQNHQNSHPTQPPLIYSQDPIPASQQP ATGHLPPFHPLRIMERIQQNRFAPPTPVAAHLPHPPAPPSTNSFVPVQQYSAESHVPP QNVAEAPVSAPKPVPHQPSQNHQNPRSTDPPIYSRNPINVSPQSAPYAPVVTPLSNAP GTFSIRVTVPVPTIDMISAPPPTNSFVPVQAVSVVTPAPAQSVQPNQTSVQQCSTETP VPPQNVAQAPVPAPRPVPQQPAQNFQNLHSTAPPIYSQNPIDVSQQPSTVHPQRIMER AQQHRFVPHVPVISAPPRTNSFVPVQPVSVVTPVPAQSDQPNQTSVQQPSAEPPVPPQ NVAQIPLPAPKPVPQQPSQNHQNPHSTGPPIYSEYPVPVSQQPSTVHPQRIMERAQQH RLVPPTPDVASLPHAPGTFSVRATVRAPTIDMISAPPPTNSFVPVQPVSVVTPAPAQS VQPNPISVQQHSTEPPVPPQNVAQPPVPALKPVPQPHAHHQNSHSTQPPLIYSQDPIP VSQQPLLLISLIRQVLFSVRVTVAVPTIDFISAPPPTNSLVSCSSPQPATTFDAPIAT YPPPPPPAESIEEIPLPQSPQRFSPRPFSPIPVRPFSPSLHHVPLDLWNQVPAPTSPS SDNSTPQPLSPSPIQSPPRSPEDDDNDSVNEEIAESYQRASRKRNRSYGSNDDDSRDP TWSPSQERRQRSRSRSERTSDRVRSKSRRRYEDDPLYIPREGEPRRPRRKFYRTRSNS RHGERLVEQVVREPIPEAMEQRDVSPEPEQVDGLLGSRENPVVLSDDEESIRDSSPET DMVREHDEYQLGSREMSIDSRSDESSPEPEIVENRVEDQLGSREMSLESNVSLEPEQD PVRSSREFTLDSVLSVCPGTPQASPKPSWLGQFSRPSLPPSPSSQRSERPAQISENSY RARNLEIRSGPTALAYYSNSYRQGSLQTSPQDYLQMDRAQRNNQQ" gene <324537..>332535 /locus_tag="CRE_13274" /db_xref="WormBase:WBGene00061581" mRNA join(<324537..324680,325103..325269,325881..326397, 327835..327954,331685..332137,332186..332341, 332392..>332535) /locus_tag="CRE_13274" /product="hypothetical protein" /db_xref="WormBase:CRE13274" /db_xref="WormBase:WBGene00061581" CDS join(324537..324680,325103..325269,325881..326397, 327835..327954,331685..332137,332186..332341, 332392..332535) /locus_tag="CRE_13274" /note="contains similarity to Pfam domain PF00018 SH3 domain; contains similarity to Interpro domains IPR001060 (Cdc15/Fes/CIP4), IPR001452 (Src homology-3)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94443.1" /db_xref="InterPro:IPR001060" /db_xref="InterPro:IPR001452" /db_xref="PFAM:PF00018" /db_xref="WormBase:CRE13274" /db_xref="WormBase:WBGene00061581" /translation="MNARMSKLRRSISRSVFQLNSSLSRQNSLNGLVDLPTMSNTTLV DKFATPTNFRQLRDVIRNNNELLAEVVAAFEEKAALDFHYSKTLKKISIRLHKLTQSV ESGIDKGWTNVAEQFDIHATIHSNLGSALTEDIIQPLRSIHTSQQKTIRAADNFVERE IRKLKDKKEETQKMKRSLYVLSKELEKTENAAEREKMAPEKYALRRKKYKEQMIRSED DYVWQTVDLEKQRRMTENVLRKGVESMESVERQRLAHCQTALGRYKRKIENLGPNLRQ MFERHSNNLELAVDSVPEDYIQTIQPSTSAVNHITLIDLHAENFGEVMSSTRRRQNLE RVSGVLDSELKRMYNNQTADVMVSNSKQIVRRDFLRSFEFLSTEFQSVLEFIEYLYYK INDSINIVDGGQNRGFHRLARFQHKIKDKSGLAMTILTIPLTGENNSLPPPSLSLEAS TAYPSPHGSNDYEEYEKISDDGFYSTATTNTSSSGGARTTTTFNESTSNSPTICRVLY DFEPKHSDEIQIREGQCVLVEDRIGEDWLIGHVISQPDNSSIDPRSGRFPTTYVSLRQ " gap 326925..326934 /estimated_length=10 gene complement(<333217..>335119) /locus_tag="CRE_13370" /db_xref="WormBase:WBGene00074309" mRNA complement(join(<333217..333257,334652..334804, 334858..>335119)) /locus_tag="CRE_13370" /product="hypothetical protein" /db_xref="WormBase:CRE13370" /db_xref="WormBase:WBGene00074309" CDS complement(join(333217..333257,334652..334804, 334858..335119)) /locus_tag="CRE_13370" /note="contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein; contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94470.1" /db_xref="InterPro:IPR002651" /db_xref="PFAM:PF01748" /db_xref="WormBase:CRE13370" /db_xref="WormBase:WBGene00074309" /translation="MYGFIFKNFICMFFNGVHYFIVCAYLLYHSCSTSIRTVSKIYRQ VTVQCMIVCTCHFIGCFLYIYMQYRQLPNVFHVIAQLAWIGNHGLPPQVYLIFNTSIR SKISFCHLQVNRMVASSHNDQKSGGIVKTPKRILLLFVVVAGRMLVALI" gap 334604..334613 /estimated_length=10 gene <339188..>343169 /locus_tag="CRE_13275" /db_xref="WormBase:WBGene00061579" mRNA join(<339188..339300,339436..339549,340890..340991, 341044..341310,341604..341729,342806..342910, 343058..>343169) /locus_tag="CRE_13275" /product="hypothetical protein" /db_xref="WormBase:CRE13275" /db_xref="WormBase:WBGene00061579" CDS join(339188..339300,339436..339549,340890..340991, 341044..341310,341604..341729,342806..342910, 343058..343169) /locus_tag="CRE_13275" /note="contains similarity to Interpro domain IPR010916 (TonB box, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94365.1" /db_xref="InterPro:IPR010916" /db_xref="WormBase:CRE13275" /db_xref="WormBase:WBGene00061579" /translation="MVASSVKLDPIFEDAPLLPPLPEDKNPIGHRFESEPTRANALAA AKRLLDDSRGQSWEQLARKYTLGLAAAPCVERLTEEELDESLEVMPEYHNYRFNRSRS VDLSSISREKYLSRWSRENTPVDNEKRYASHVRRSYTPVRDIASVEHVNDGNLHRSRT PLAAVTAPYHTNIHYRSEIEPFRKYDTFGLRTWSYPIYKYVYGREGDYRRPYSFDRNY GLTPVYTPPQLAAESRPITTRRGYSGYSYLASETHFDIASRPKSLSSYMYNTKYLGTT SAPWYWSYYGNSNLRHFNSYRPHNYTSSTASWSRYY" gene complement(<343479..>345514) /gene="Cre-nit-1" /locus_tag="CRE_13371" /db_xref="WormBase:WBGene00061578" mRNA complement(join(<343479..343788,344812..344893, 344941..>345514)) /gene="Cre-nit-1" /locus_tag="CRE_13371" /product="CRE-NIT-1 protein" /db_xref="WormBase:WBGene00061578" CDS complement(join(343479..343788,344812..344893, 344941..345514)) /gene="Cre-nit-1" /locus_tag="CRE_13371" /note="contains similarity to Pfam domain PF00795 Carbon-nitrogen hydrolase; contains similarity to Interpro domains IPR003010 (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase), IPR000132 (Nitrilase/cyanide hydratase, conserved site)" /codon_start=1 /product="CRE-NIT-1 protein" /protein_id="EFO94375.1" /db_xref="InterPro:IPR000132" /db_xref="InterPro:IPR003010" /db_xref="PFAM:PF00795" /db_xref="WormBase:CRE13371" /db_xref="WormBase:WBGene00061578" /translation="MPKIAIVQAGTVLYDKVATLEKVKKYVVEASENGAELVLFPEAF IGGYPKWNNFGITMGTRTPEGRKEFKRFDFSLSFLQFLFFRYFENAIEEHGEESKSIE SLASQKNIHIVIGVVEREASTLYCSVFFYSPDGYLGKHRKLLPTALERCVWGQGDGST MPVFNTSVGKIGSAICWENYMPLYRMTLYNKEVQIYLAPTVDDRDVWLSTMRTIALEG RCFVVSACQYLKSSAYPSDHLLRKEHGDDTVLIRGGSCAVDPLGTVLVEPDFTQETIR YTEFDLSDIALGKMDLDVVGHYSRPDVFQLTVNENQMSTVTHKKE" gene <347094..>348419 /locus_tag="CRE_13276" /db_xref="WormBase:WBGene00061577" mRNA join(<347094..347177,347228..347380,347439..347585, 347665..347820,348147..>348419) /locus_tag="CRE_13276" /product="hypothetical protein" /db_xref="WormBase:CRE13276" /db_xref="WormBase:WBGene00061577" CDS join(347094..347177,347228..347380,347439..347585, 347665..347820,348147..348419) /locus_tag="CRE_13276" /note="contains similarity to Pfam domain PF08242 Methyltransferase domain; contains similarity to Interpro domains IPR017280 (Methyltransferase, METTL2, predicted), IPR013217 (Methyltransferase type 12)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94367.1" /db_xref="InterPro:IPR013217" /db_xref="InterPro:IPR017280" /db_xref="PFAM:PF08242" /db_xref="WormBase:CRE13276" /db_xref="WormBase:WBGene00061577" /translation="MTEEGFYSFSSQNSRELTEDDHEKLAKQTNISDFKEKKLEIEAR KNWDKFYNRNKNNFFKDRNWSAEDLKIICPDIDFEKEISYLEAGCGVGNMLFPLVAEI PKLKLFAFDFSDNAVRLLEERAKELKLPVTTSVVDLSIPSVSSPFDEQVDLATLIFVL SAIHPDKMQIAAENMRNLVKIGGSVVVRDYGINDHAMIRFGREARISDRFYVRQDGTR AYYFDLDELTGFFENSGFRCVRKEYLHRMTINHQKNLKAPRIFVQARFIREN" gene complement(<348496..>350260) /locus_tag="CRE_13372" /db_xref="WormBase:WBGene00061576" mRNA complement(join(<348496..348801,348951..349139, 349190..349372,349689..349792,349840..>350260)) /locus_tag="CRE_13372" /product="hypothetical protein" /db_xref="WormBase:CRE13372" /db_xref="WormBase:WBGene00061576" CDS complement(join(348496..348801,348951..349139, 349190..349372,349689..349792,349840..350260)) /locus_tag="CRE_13372" /note="contains similarity to Pfam domains PF01087 (Galactose-1-phosphate uridyl transferase, N-terminal domain), PF02744 (Galactose-1-phosphate uridyl transferase, C-terminal domain); contains similarity to Interpro domains IPR001937 (Galactose-1-phosphate uridyl transferase, class I), IPR005849 (Galactose-1-phosphate uridyl transferase, N-terminal), IPR005850 (Galactose-1-phosphate uridyl transferase, C-terminal), IPR011151 (Histidine triad motif)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94456.1" /db_xref="InterPro:IPR001937" /db_xref="InterPro:IPR005849" /db_xref="InterPro:IPR005850" /db_xref="InterPro:IPR011151" /db_xref="PFAM:PF01087" /db_xref="PFAM:PF02744" /db_xref="WormBase:CRE13372" /db_xref="WormBase:WBGene00061576" /translation="MFSFNKVNKLFSLEIGNLLDVSFELNDNYPHSCEFCLNSQTFSE KMSKVNNFRRYNPLIDEWIIVAVNRINRPWQGAKTTVSKNSEDTTSSDSRAPPEKNQL APGGVRSSGAVNEEYQSTFVFENDFPSFTEFEKCAGEEENDDLFKQQEVRGVCKVICY HPDSKLTLATMDLKEVRTVIDIWNQQYVELCPKYDWVQIFENRGAVVGCSNMHPHGQL WASNYLPSIPLKKHQSQKKYFEKHGGKVMLMDYLDKEIAKNERIIMRNEHWTWLVPYW AFWPYETMLLPNRHVERFTDLEETEKQSLSSILRDLLIKYDNIFECSFPYMMGWSGAP TGSFLQQDCSFWQLHLSFFPPLLRSATVPKFLAGYEVFAEKQRDTSPEIAAKTLREMN GVHYSKRN" gene complement(<350708..>352782) /gene="Cre-ccdc-47" /locus_tag="CRE_13373" /db_xref="WormBase:WBGene00061575" mRNA complement(join(<350708..351469,351915..352034, 352113..352406,352606..>352782)) /gene="Cre-ccdc-47" /locus_tag="CRE_13373" /product="CRE-CCDC-47 protein" /db_xref="WormBase:WBGene00061575" CDS complement(join(350708..351469,351915..352034, 352113..352406,352606..352782)) /gene="Cre-ccdc-47" /locus_tag="CRE_13373" /note="contains similarity to Pfam domain PF07946 Protein of unknown function (DUF1682); contains similarity to Interpro domain IPR012879 (Protein of unknown function DUF1682)" /codon_start=1 /product="CRE-CCDC-47 protein" /protein_id="EFO94401.1" /db_xref="InterPro:IPR012879" /db_xref="PFAM:PF07946" /db_xref="WormBase:CRE13373" /db_xref="WormBase:WBGene00061575" /translation="MKITWIFVLLAILCCGFATAATDDNEFAEFEDEFIENSVTDTPP TQQEDRRPVPPIVEQRDDFDDDDFGVVDEEDHEEVEKVKETDPDEPTPVQSLKFTDVP AHFRSNWASYQVEGLVVLVILIYLVNYIIGKTTNSSIAHVVFEMCRPTLEEQFSVVGD DGITELDKHETQLRRDTDSTFSAWCSGRINVNSMFLQMKMLKRQDLVSRVMDIFDPSY DKMTIKIQLEGGNDVDPLIFAVGEKKIASKNFKEMFDLNSYVSERKQAAQQLNLPATW QLYADQNEVLFSILEPGVVSLLKKHEEAIEFIHISDQYTGPKPAEGESYTRLPDPQRF MFVSLNLKSLGQDEESATEILNLVFYLIDKVKKMKLSKDAKQKAEKRRKDFEEAFLKQ THQFRQEAAQARREEKTRERKQKLMDENDPDRQKRLEAKEIKREAKAKQPKMKQLKVK " gene <357762..>363734 /gene="Cre-pat-3" /locus_tag="CRE_13277" /db_xref="WormBase:WBGene00061574" mRNA join(<357762..358019,358068..358272,358376..358779, 360080..360516,360564..360902,361601..362088, 363310..363596,363663..>363734) /gene="Cre-pat-3" /locus_tag="CRE_13277" /product="CRE-PAT-3 protein" /db_xref="WormBase:WBGene00061574" CDS join(357762..358019,358068..358272,358376..358779, 360080..360516,360564..360902,361601..362088, 363310..363596,363663..363734) /gene="Cre-pat-3" /locus_tag="CRE_13277" /note="contains similarity to Pfam domains PF00362 (Integrin, beta chain), PF07965 (Integrin beta tail domain), PF07974 (EGF-like domain) (2), PF08725 (Integrin beta cytoplasmic domain); contains similarity to Interpro domains IPR002369 (Integrin beta subunit, N-terminal), IPR012896 (Integrin beta subunit, tail), IPR001169 (Integrin beta subunit, C-terminal), IPR015812 (Integrin beta subunit), IPR014836 (Integrin beta subunit, cytoplasmic), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular), IPR012012 (Integrin beta subunit, subgroup); coded for by the following C. remanei cDNAs: DY526911, DY526906, DR779065" /codon_start=1 /product="CRE-PAT-3 protein" /protein_id="EFO94485.1" /db_xref="InterPro:IPR001169" /db_xref="InterPro:IPR002369" /db_xref="InterPro:IPR012012" /db_xref="InterPro:IPR012896" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013111" /db_xref="InterPro:IPR014836" /db_xref="InterPro:IPR015812" /db_xref="PFAM:PF00362" /db_xref="PFAM:PF07965" /db_xref="PFAM:PF07974" /db_xref="PFAM:PF08725" /db_xref="WormBase:CRE13277" /db_xref="WormBase:WBGene00061574" /translation="MYTLCHFFPVIPTPTIRHSMPPSTSLLLFAALLIPLVLAAGDWK TGEVTGKVVEKSEFPCYSLSRDNYTCSACIQFHESCAWCGAPMFDEKKPYARCDSRSK LMEHGCPDSYIEDPTTKLDITEDSKLSDQGEVESEEEAVQIKPQQMYVEIRPKSRVRF NVTYRQAVDYPVDLYYLMDLSYSMKDDKQKLSELGDLLAERMRTVTKNFRLGFGSFID KKLMPFIDPRIEKQLSPCPTPCAEPYGFKHQMSLTTNTAKFKAEVDKAEISGNLDAPE GGFDAVVQALACNKTIGWRERARKMIVFSTDAGFHFAGDGRLAGVVEPNDGSCHLDRE GYYTETLNQDYPSIALLHQMIKDRKANVIFAVTKNNQDLYTQLSNALPDVSSSVGVLA NDSRNIVDLIEKEYLKISEKIIMVDNANASEGLKLTYRSMCLDGTTLKDTNVCEGIRV GDEVQFEVTLENTHCIDKRDFVLRIGPSGLDETLIVNVKVLCDCDCERQDRIVTNAAE CHGGDMVCGVCRCKGGNVGKYCECNRPGMSTAALNEKCKRTNESAICEGRGVCNCGRC ECNPRANPEEQISGEFCECDNFNCPRHDRKICAEHGECNCGKCICAPGWTGRACECPI STDSCLSANGKICNGKGECICGRCRCFDSPDGNRYSGAKCEICPTCPTKCVEYKNCVM CQQWQTGPHNETECDKCEFKAIPVDELPTLNETTPCQFVDPADDCTFYYLYYYDEATD NATVWVRRHKDCPPPVPVLAIVLGVIAGIVILGILLLLLWKLLTVLHDRAEFAKFDND RLMAKWDTNENPIYKQATTTFNNPAYANKAN" gap 359655..359814 /estimated_length=160 gap 362830..362839 /estimated_length=10 gene complement(<364533..>369612) /locus_tag="CRE_13374" /db_xref="WormBase:WBGene00061573" mRNA complement(join(<364533..364805,365121..365576, 366660..366992,367046..367381,369341..369515, 369563..>369612)) /locus_tag="CRE_13374" /product="hypothetical protein" /db_xref="WormBase:CRE13374" /db_xref="WormBase:WBGene00061573" CDS complement(join(364533..364805,365121..365576, 366660..366992,367046..367381,369341..369515, 369563..369612)) /locus_tag="CRE_13374" /note="contains similarity to Pfam domain PF07714 Protein tyrosine kinase; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94431.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE13374" /db_xref="WormBase:WBGene00061573" /translation="MTTTLSALPYYHGSIDIRERREMLPDLGDFLIRNVAQEVDKSDG TGQVYCILTTAVTPEQASDNSKMLPKEYSLRLECTTRLKSYAINLNGGIYSVQGSATD AFPSLEALCESYIQTKQPLPAGGMLLKGVIRRPWQLFLCDVELPEPEILLGSGEFGKV VKGKFLKPGVGPIDVAIKMATDLNAEITSEIFTEARAMRALIHPNIIRLEGVVVEKIP VMLVIEFLEGSSLLDALLKKRVPNEMRFPICMAVLYAVLHMHINSYIHRDIAARNVMV SHDCRTVKLIDFGLAKHGTQFISDTWALAICFWEIFHDGAEIFCNVVPSFDSKPDTTP VEKEPEREPSKTSQSKNTKASMTRKRVKMVGKSAAPATPVAATPVSKPKNKNDPPLLV ITQNVEFLPKEFIPMFNLMTEKKGRKRIELAAMAYTVETVIMPTLPPAVQAELKVHVD KRVPFDKNFKVDLLNTDSVITLPTTAPAANPSTPIAGSARTPASARTPATAKSKTVTR RRNKGMKSDHAQSSGSVPEKKTDKNKTARRKK" gene <370866..>375117 /locus_tag="CRE_13278" /db_xref="WormBase:WBGene00061572" mRNA join(<370866..371000,371054..371521,372087..372183, 372231..372602,373076..373479,373526..373669, 373714..373882,374343..374474,374532..374920, 374968..>375117) /locus_tag="CRE_13278" /product="hypothetical protein" /db_xref="WormBase:CRE13278" /db_xref="WormBase:WBGene00061572" CDS join(370866..371000,371054..371521,372087..372183, 372231..372602,373076..373479,373526..373669, 373714..373882,374343..374474,374532..374920, 374968..375117) /locus_tag="CRE_13278" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PHK3" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94425.1" /db_xref="WormBase:CRE13278" /db_xref="WormBase:WBGene00061572" /translation="MQNNNTNQNANTNPFQFPHPNFPMQMFMPGTGPSTSATPFQFLQ NAVYPNGMGAFWNPAVIQNFAMLNQKAMNMMLPQPGLWNPTIPVAPPTNAPKESETTV SPSQANTRSPSPKLVQPEPIEVVKETKRESTPPVDVVSVSPEGKSSADRERSRESSNS RFDYDEGNDDVDNMFGISFSEKELSPSSDGSRVERCLSPIAFTPPDSPQHHLSFDEIL GIGSTVKPQEIPKAKTPSPPKPSSSKTPTNFLKMDEEEFIKNYVQPKKVPIYKQKAAL LLLEDSKKKNDSNYDVFDFDMADEEDRFVEGKPAEKSEKVEKEMVAKSVYIPGVGFEV KNDKDGNVRKAMARPKDQTAFISDHLEFSLADKIRAERNLHTSCSFLKIMELFDTDCA KNMRKVTAEEPLLPKFTIKIDQLKTVNKKRTIKSKKRKSTESISDDEEVRYSKKAGEV VYSILRTSDTRPSALNFPVGPGVSEEERRRLDMFGPADGILPKDAYLVLQSDILKWDC PIWKVDNQTLLRKFTPLRAKNTGKLVYTSTTTYSGWYEQIKHQYFRVSVRVMKSSRYG VVLEPEIPLNEVFCASAMEWFKNPRCFLTEEPITKNTDSDFLKEPRQKALHTLLNICL VQALTRKYVKSLRDKNDWSYTHAAAEIEKNNQRCEDLIQKRIRVDLKLKIWIGSYTRL VISKTSYHCLTTCQICNLEKSQNILSFFDKTEYDLNLTVDSSTDNSEKENQDPLVVNV ISCEKCSMSIDFLHKMHHLQFHILRVCEDKLELIGTTEVDLTAKELIKMAKSDEAWVF GVIQMYCDIWDTVIEQFSNIC" gene <377213..>382166 /gene="Cre-mmcm-1" /locus_tag="CRE_13279" /db_xref="WormBase:WBGene00061571" mRNA join(<377213..377745,378447..379095,379890..380765, 381655..381941,381989..>382166) /gene="Cre-mmcm-1" /locus_tag="CRE_13279" /product="CRE-MMCM-1 protein" /db_xref="WormBase:WBGene00061571" CDS join(377213..377745,378447..379095,379890..380765, 381655..381941,381989..382166) /gene="Cre-mmcm-1" /locus_tag="CRE_13279" /note="contains similarity to Pfam domains PF01642 (Methylmalonyl-CoA mutase), PF02310 (B12 binding domain); contains similarity to Interpro domains IPR006098 (Methylmalonyl-CoA mutase, alpha chain, catalytic), IPR014348 (Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain), IPR006099 (Methylmalonyl-CoA mutase, alpha and beta chain, catalytic), IPR001865 (Ribosomal protein S2), IPR006159 (Methylmalonyl-CoA mutase, C-terminal), IPR006158 (Cobalamin (vitamin B12)-binding); coded for by the following C. remanei cDNAs: DR407861" /codon_start=1 /product="CRE-MMCM-1 protein" /protein_id="EFO94359.1" /db_xref="InterPro:IPR001865" /db_xref="InterPro:IPR006098" /db_xref="InterPro:IPR006099" /db_xref="InterPro:IPR006158" /db_xref="InterPro:IPR006159" /db_xref="InterPro:IPR014348" /db_xref="PFAM:PF01642" /db_xref="PFAM:PF02310" /db_xref="WormBase:CRE13279" /db_xref="WormBase:WBGene00061571" /translation="MSPFRSHRYNICFLVISSSVLSSFFPQLLLFFRSSAHLGKMYHH LLKPTLVRCSTRPSSSGGAYSRFPIDEKWAAMAKKAMKGREADTLMWNTPEGIPIKPL YLRNDRDCDAHRNVELPGQFPFTRGPYPTMYTQRPWTIRQYAGFSTVEESNKFYKENI KAGQQGLSVAFDLATHRGYDSDNPRVFGDVGMAGVAVDSVEDMRQLFDGINLEKMSVS MTMNGAVIPVLAMYVVAAEEAGVNRKLLAGTIQNDILKEFMVRNTYIYPPEPSMRIIG DIFAYTSREMPKFNSISISGYHMQEAGADAVLEMAFTIADGIQYCETGINAGLTIDAF APRLSFFWGISMNFYMEIAKMRAARRLWANLIKERFHPKSDKSMMLRTHSQTSGWSLT EQHGTLLTTALYRNRRKLCAKLRDSEKKRHFSSISVERGCKNCAELTQHHNPTNFQDP YNNIIRTTIEAMASVFGGTQSLHTNSFDEALGLPTKFSARIARNTQIIIQEESGICKV ADPWGGSYMMESLTDEIYEKAMTVIKEIDELGGMAKAVASGMTKLKIEEAAAKKQARI DAGKDIIVGVNKYRLDEEQRVDVLKIDNARVREEQCAKLNHIRETRDAAKAKKALDDI TEGAKGDGNLMALAVEAARARCTVGEISDAMEKVFNRHAAVNRLVSGAYKSEFGETSE MSQVVLDRVKSFADRDGRQPRIMVAKMGQDGHDRGAKVIATGFADLGFDVDVGPLFQT PQEAAQQAVDADVHVIGASSLAAGHLTLIPQLIGELKKLGRPDILVVAGGVIPPQDYK ELYDAGVALVFGPGTRLPACANQILDKLEKALPEAPGKAAAR" gap 383285..383813 /estimated_length=529 gap 386371..386380 /estimated_length=10 gene <401991..>436421 /gene="Cre-tir-1" /locus_tag="CRE_13280" /db_xref="WormBase:WBGene00061569" mRNA join(<401991..402079,414564..414702,415069..415191, 415726..416106,416590..416820,416863..416981, 423803..424180,424338..424449,435062..436096, 436149..436266,436315..>436421) /gene="Cre-tir-1" /locus_tag="CRE_13280" /product="CRE-TIR-1 protein" /db_xref="WormBase:WBGene00061569" CDS join(401991..402079,414564..414702,415069..415191, 415726..416106,416590..416820,416863..416981, 423803..424180,424338..424449,435062..436096, 436149..436266,436315..436421) /gene="Cre-tir-1" /locus_tag="CRE_13280" /note="contains similarity to Pfam domains PF07647 (SAM domain (Sterile alpha motif)), PF01582 (TIR domain), PF00536 (SAM domain (Sterile alpha motif)); contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR000157 (Toll-Interleukin receptor), IPR013761 (Sterile alpha motif-type), IPR001660 (Sterile alpha motif SAM), IPR011510 (Sterile alpha motif homology 2)" /codon_start=1 /product="CRE-TIR-1 protein" /protein_id="EFO94481.1" /db_xref="InterPro:IPR000157" /db_xref="InterPro:IPR001660" /db_xref="InterPro:IPR011510" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR013761" /db_xref="PFAM:PF00536" /db_xref="PFAM:PF01582" /db_xref="PFAM:PF07647" /db_xref="WormBase:CRE13280" /db_xref="WormBase:WBGene00061569" /translation="MMGEEILTERNQLSRQDASCFRSPRSPLGRTDDAFFEIEDDDEF SSPSSPPSPSSVDPPSITVPLPPKSAPPFPTQPAPTINGDIYPASGTGTPTILSNGTP LAPGRMSPAHSVSNLINESRLQQSLSTPCNGSEEEMHGQQRKDSEYRRFKSEGSTAGA NLPAAEKTHMDELSPVDQRSTSGTTRFALMQQDSVVNPSVITKLSNTEQVAMMHTLKT KLSKYQSFLDRAFELIAENTDEKIIEGCTISIKVMKKAWTTPKVSSDLANALCDYLRD RDYFDKLIKMFTSTTSTSCDQVKLSCGKVLEECMSSANRDFVVNKNYVKKIMTVAMKL TKTPDQQRLSLSLMESLFQHSNAVSLSLIESDVIEHIILTFKRATGCPDILRHAALGL ANLALYSCFEGKKKIIQKKVPDWLFFLASQSDDVTRYYACLAVCTIASVKEFEPAVIK SGTLKLVEPFLQIHDPATFAVEHHKYAQGRPKEWLEKLLPMLQSSRREARSVAAFHFT LEAVIKKEQNKLDVFQEIGAIQALKEVASSPDEVAAKNASEALTVIGEEVPYKLAQQV PGWTCADVQYWVKKIGFEEYVEKFAKQMVDGDLLLQLTENDLKHDVGMVSGLHRKRFL RELQTLKVAADYSSVDESNLDNFLMGLSPELSVYTYQMLTNGVNRSLLSSLTDEMMQN ACGITNPIHRLKLTQAFETAKHPDDVEVAMLSKQIDVFISYRRSTGNQLASLIKVLLQ LRGYRVFIDVDKLYAGKFDSSLLKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKEL KCAFEHQKNIIPIFDQAFEFPSKEDQIPNDIRMITKYNGVKWVHDYQDACMQKVVRFI SGELNRTTPTTKEMPALSRKTTQQQRWQTTNVIRTGTSSRSINSRMEPPTPTFFSVTP NGSQERAQSTRRKIQSSVSTVSDHVRNNN" gap 429211..429220 /estimated_length=10 gap 433379..433388 /estimated_length=10 gene complement(<437180..>438791) /gene="Cre-rpl-3" /locus_tag="CRE_13375" /db_xref="WormBase:WBGene00061568" mRNA complement(join(<437180..437443,437588..438028, 438078..438213,438427..>438791)) /gene="Cre-rpl-3" /locus_tag="CRE_13375" /product="CRE-RPL-3 protein" /db_xref="WormBase:WBGene00061568" CDS complement(join(437180..437443,437588..438028, 438078..438213,438427..438791)) /gene="Cre-rpl-3" /locus_tag="CRE_13375" /note="contains similarity to Pfam domain PF00297 Ribosomal protein L3; contains similarity to Interpro domain IPR000597 (Ribosomal protein L3); coded for by the following C. remanei cDNAs: DY526993, DY527282, DT936191, DR780536, DT934746, DR778151, DT936881, DT935220, DR780363, DR778286, DY527207, DY527880, DY525651, DR780680, DR409396, DR781051, DR782306, DR779263, DR778634, DR409509, DR779861, DR780036, DY526578, DR781212, DY526487, DY525576, DT934080, DY528787, DY525415, DR408244, DR408981, DT935046, DR409441, DR780557, DR782307, DR779836, DY526161, DT934732, DT934901, DR778882, DR409534, DR409136, DY527681, DT937202, DY524908, DY528639, DR408947, DY528242, DR779141, DR778943, DR776375, DT936845, DR778553, DT935550, DY527194, DT936256, DT934953, DT937048, DR407252, DT935840" /codon_start=1 /product="CRE-RPL-3 protein" /protein_id="EFO94439.1" /db_xref="InterPro:IPR000597" /db_xref="PFAM:PF00297" /db_xref="WormBase:CRE13375" /db_xref="WormBase:WBGene00061568" /translation="MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLT AFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRAL TTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSI RVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMID TIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHH RTIINNKIYKIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGIVNQDYIMLRGAI LGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD FLAEAEAKA" gene complement(<439576..>441102) /locus_tag="CRE_13376" /db_xref="WormBase:WBGene00061567" mRNA complement(join(<439576..439716,439763..439914, 439965..440491,440999..>441102)) /locus_tag="CRE_13376" /product="hypothetical protein" /db_xref="WormBase:CRE13376" /db_xref="WormBase:WBGene00061567" CDS complement(join(439576..439716,439763..439914, 439965..440491,440999..441102)) /locus_tag="CRE_13376" /note="contains similarity to Pfam domains PF00651 (BTB/POZ domain), PF00917 (MATH domain); contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94358.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="PFAM:PF00651" /db_xref="PFAM:PF00917" /db_xref="WormBase:CRE13376" /db_xref="WormBase:WBGene00061567" /translation="MKFVLKHVFVNVPKLLNGEIIQIDSEQEEHFNVTWGMSLKKAGK TVCLCLSMTNPNDNDDYAIQTVIDLKTIASNGKMCTKTKEHVFKYWESDDVGIELMSC GKMTKNYVIDGKLTIEARVKILEMSGIKKRKLRNFDETTKGYSDIILVVGEQKFYVSK LYLASHSKYFDSLLLGKFQESKKSEVVLRDIQPEDFQNFLEVLHGEDAISDETIKGIL FLADMYDAPTAHRRCEQFLINESKMSLKEKLEISARYKMKRVKNKCLSKIKTIEDIRA VLPGNIEDMDHSLLATVLQKSLSYIDKLSKC" gene complement(<441496..>443731) /locus_tag="CRE_13377" /db_xref="WormBase:WBGene00061566" mRNA complement(join(<441496..442324,442373..442815, 442894..443604,443672..>443731)) /locus_tag="CRE_13377" /product="hypothetical protein" /db_xref="WormBase:CRE13377" /db_xref="WormBase:WBGene00061566" CDS complement(join(441496..442324,442373..442815, 442894..443604,443672..443731)) /locus_tag="CRE_13377" /note="contains similarity to Pfam domain PF00501 AMP-binding enzyme; contains similarity to Interpro domains IPR011904 (Acetate--CoA ligase), IPR000873 (AMP-dependent synthetase and ligase); coded for by the following C. remanei cDNAs: DY529281, DT936955, DY527670, DR778476, DY529528, DR407426" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94457.1" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR011904" /db_xref="PFAM:PF00501" /db_xref="WormBase:CRE13377" /db_xref="WormBase:WBGene00061566" /translation="MSDVRVKFNLANDGDGQDEDIFLPPAPLLAGAHCSGLQSYHDLY RSSINDSDEFWRTVSSELHFEQGTSKGLEYNFDAKAGNVFCKFMDGAKTNISYNCLER NIKKGLGDKIAYIFEGNEPTDVTTWTYRELLAQVVQFSAVLRSHGVKRGDVVALYLPM IPELAVAMLACARIGAMHSVVFAGFSAESLAARVVDARCRVLVTADGVFRGAKPIGLK SIADAAVALAAQEDVKVEAVVMVEHLKRVTKPDGVELPKADYTEITFVYETEMQKCAG VDSPVEWMDSESPLFLLYTSGSTGKPKGIQHTTAGYMTYAYATTKYTFDAQDDDVYWC TADCGWITGHSYLLYGPLMNGLKGIWYEGVPTYPTPSRMWDVTDKYGVTKLYTSPTAA RALMALGNKWLESTSRQTLKVIGTVGEPINPAAWMWLYKKVGLSNVSIVDTYWQTETG GHMITCLPGATPMKPGAAAMPFFGASPVLLDGEGRVIEGPGEGSLCFDRAWPGMMRGI YGDEQRFVKTYFAPFNGYYFTGDGARRDEDGYLWITGRVDDLMNVSGHLLSTAEIESA LVAHEKVAEAAVVAAPHDIKGSFPYAFVTLNVGEKINDKLVAELKKMVREKIGALAVP DIIQEAPGLPKTRSGKVTRRILRKIAEGSESGIGDTTTLVDESVIKQLISGRSARA" gene <445377..>449970 /gene="Cre-brc-1" /locus_tag="CRE_13281" /db_xref="WormBase:WBGene00061565" mRNA join(<445377..445450,445497..446086,446138..446205, 446966..447250,447295..447423,447471..447570, 447619..447737,449503..449676,449728..>449970) /gene="Cre-brc-1" /locus_tag="CRE_13281" /product="CRE-BRC-1 protein" /db_xref="WormBase:WBGene00061565" CDS join(445377..445450,445497..446086,446138..446205, 446966..447250,447295..447423,447471..447570, 447619..447737,449503..449676,449728..449970) /gene="Cre-brc-1" /locus_tag="CRE_13281" /note="contains similarity to Pfam domains PF00097 (Zinc finger, C3HC4 type (RING finger)), PF00533 (BRCA1 C Terminus (BRCT) domain); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR001357 (BRCT); coded for by the following C. remanei cDNAs: DR409122, DR780539, DT935735" /codon_start=1 /product="CRE-BRC-1 protein" /protein_id="EFO94509.1" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00097" /db_xref="PFAM:PF00533" /db_xref="WormBase:CRE13281" /db_xref="WormBase:WBGene00061565" /translation="MSASIALQITDTIARLQKELRCGICCSTFKDPILSTCHHIFCRT CINTCFERKRKVECPICRTVLDKRSCRDSYQITMAVQNYLKLSTAFKQDIENINTFRT LPPEKAFMESQMPLDVTIIPENDGKRCAPDFAIPLLPVRRKRTSRPVPSAEPSTSGDP APEPPEIPVFTAPISSSKAKKAAPFKEQQTKIDAEIMTDPCRILPSELQNVDIQEHIN AVCQNGEDEIDALFYLIPSMREFLQKNATLLMNKLDIPITSPERRKSDRRVSFASSQN LEAHRYPTQSVPLEDAPEPPKPTLTATMADDDDEVVEDSEGEAQEDTQEMNQENLADL SNVTQSTTLDADRTDKAIQSEADRLDEELARPAKYIVCSRIHNDEDEVELLSDFYHKF LSNSCRFSEDVNEHTTHLVMMNSEGRNIPQKSIAYLQAIARKCVVVGRDWFVECLKTG CLCEESDYTITSCSSSITADIVPKSGAEIGWLRARSDAGGKLFAGFRFMILRRFTMSP YFDYKHLIELVQLCGGEILSNYENQSPVNLYMIFSKHSKSIAESRNMENLYKCQVVTT EWVLDCISEYSILPTDAYKAIDSIEDD" gene <452229..>454268 /locus_tag="CRE_13282" /db_xref="WormBase:WBGene00061564" mRNA join(<452229..452686,453983..>454268) /locus_tag="CRE_13282" /product="hypothetical protein" /db_xref="WormBase:CRE13282" /db_xref="WormBase:WBGene00061564" CDS join(452229..452686,453983..454268) /locus_tag="CRE_13282" /note="contains similarity to Pfam domain PF07647 SAM domain (Sterile alpha motif); contains similarity to Interpro domain IPR011510 (Sterile alpha motif homology 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94435.1" /db_xref="InterPro:IPR011510" /db_xref="PFAM:PF07647" /db_xref="WormBase:CRE13282" /db_xref="WormBase:WBGene00061564" /translation="MTPEDIEKDMKNIHQKRFLRELNSLKISADYSSLDPSHVHVFLK SIDPQLCLYTYSMLKNGITLDILTASPNADDLMDTCGIKSKVHRLQLTTTLKKLWPEP HKVIPKIRLDFFISYRQDTGAELASLIKMHLELRGYRVRMDIDKNGEQDISESLLRDV QAARNFLLVISPDNPYSKDIPCHTQLHKELRTAIQNEKNIIAVYHKDYDETRDTICLL PYDKQYLRVNWVHDYQDACVQRIVKYMYK" gene <454980..>457311 /locus_tag="CRE_13283" /db_xref="WormBase:WBGene00061563" mRNA join(<454980..455095,455874..456059,456600..>457311) /locus_tag="CRE_13283" /product="hypothetical protein" /db_xref="WormBase:CRE13283" /db_xref="WormBase:WBGene00061563" CDS join(454980..455095,455874..456059,456600..457311) /locus_tag="CRE_13283" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94369.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13283" /db_xref="WormBase:WBGene00061563" /translation="MEPEKEEHLEKKPEEKFNLMSLPFVAFRKVMYQAEFFTILNLSL VSKRSHAQVRSCALQVTDVELNLKKSFSNELNVMFKGEKYSWGVIETVNANNAGVFVN PRNDMRFKPICSRILGILHKKSVDTFRFDRSITLEDINEYWDMIEEAKNIYIASDMLT RPEMDMVLEKFQKVNSLFVDPALPLFYQGFTNRKFEILYLEGPNAITLPDFMKIDTDI LLMQVSRFENWELNIFLKKWMELPKTPGKLDPRVIRIFNSSGDISMLQDIKTYPWDPR HRSEYYVIYLDNGVMAIDCSKGFDLVRGDGRIATVLIRETSFDFLVWEHQFHDVPRNA ILC" gene complement(<458255..>459386) /locus_tag="CRE_13378" /db_xref="WormBase:WBGene00081206" mRNA complement(join(<458255..458414,458463..459245, 459292..>459386)) /locus_tag="CRE_13378" /product="hypothetical protein" /db_xref="WormBase:CRE13378" /db_xref="WormBase:WBGene00081206" CDS complement(join(458255..458414,458463..459245, 459292..459386)) /locus_tag="CRE_13378" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94418.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13378" /db_xref="WormBase:WBGene00081206" /translation="MAVPPNTKPIPILKLPFIPLNYIIQHFNPLAILDFSLLSRKCRY IIKSTNLEKYDMGLSFHSDQYLIRFQRKDIFLFYFSVDMLRARNKYLQTKISPFTNNG NEVSIEFAKFWVNYVCDLFRTKFNWLFLNSNASIEHMSAVAEWTKSLISECWCCYFAG DDANSESITRFFEIANFPIRFLVFDLKHEYEIAPINFGVLNAEEVRIFTKTSKNPVNW FTVEQMMRTNCSKMILGACTFDENDLNQFIKGWINGNNSKMEVFITVVKTIDFVLVFD GIEVDVRDPMLVRPFYSSMLTHPLEFLIVGGLDIRRNDGTVASIQRGLEFAGPRIMHY FTMVVWPQGSS" gene <459918..>462742 /locus_tag="CRE_13284" /db_xref="WormBase:WBGene00061562" mRNA join(<459918..460087,462559..>462742) /locus_tag="CRE_13284" /product="hypothetical protein" /db_xref="WormBase:CRE13284" /db_xref="WormBase:WBGene00061562" CDS join(459918..460087,462559..462742) /locus_tag="CRE_13284" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94465.1" /db_xref="WormBase:CRE13284" /db_xref="WormBase:WBGene00061562" /translation="MFSRTPILPEAEIVYPFRHRIEWLDPQLPRGDADSMAERIPEKH QLSSGRSIESLRTFVMADQNKESEKLVKKCGLIASGIEIQYEAGFNRIVVKYGEDDFT FNLIGSVKKEDFGKL" gap 463895..467562 /estimated_length=3668 gene <467833..>470169 /locus_tag="CRE_13285" /db_xref="WormBase:WBGene00061561" mRNA join(<467833..467845,468320..468744,469703..470038, 470080..>470169) /locus_tag="CRE_13285" /product="hypothetical protein" /db_xref="WormBase:CRE13285" /db_xref="WormBase:WBGene00061561" CDS join(467833..467845,468320..468744,469703..470038, 470080..470169) /locus_tag="CRE_13285" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94391.1" /db_xref="WormBase:CRE13285" /db_xref="WormBase:WBGene00061561" /translation="MIMESLSSQAEQTKKVEVKNVDPDEEKMKRLLKKLKSAKKEPKA PQLPIDEKSKLLMDRVVKKPYPLKYVTKSKEELLMDEKSSFFKPSTISSNSKRHQQAV GETDSYDTYPKLADVVKMKGQNIYISDGVTPFWAEYMSPLPKDKVGIEEPVSVDQDHL EAYNEHRITLKTCNDKNPVIMNSFQPMSELRKRDELHFHDHLIFSNTVRSMVNVMSPL SSALTADAVSGGGGKKEVKTSTSSAKIRMAPRSPLQFVYLRSDPIRTARDVRLKVSKS KTTATTTVGED" gene <471863..>472997 /locus_tag="CRE_13286" /db_xref="WormBase:WBGene00061560" mRNA join(<471863..471957,472006..472788,472838..>472997) /locus_tag="CRE_13286" /product="hypothetical protein" /db_xref="WormBase:CRE13286" /db_xref="WormBase:WBGene00061560" CDS join(471863..471957,472006..472788,472838..472997) /locus_tag="CRE_13286" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94494.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13286" /db_xref="WormBase:WBGene00061560" /translation="MAVPPNTKPIPILKLPFIPLNYIIQHFYPLTLLDLSLLSKKCRY IIKSTNLVKYDMGLSFQVDEYLIRFQRKDTLKFFFSINILRERNKYLQTEMRPYSNNG NEVSIEFAKFWVNYVCDLFRTKFNLLFLDSNASIDQMSAVGEWTKSLISECWFCHVAG DDANSESISRFFEITNFPIRFLVFDLRHEYEIAPINCGVLNAQEVLIYSKTSKNPVNW FTVEQMMRTNCSKMILGACTFDETDLNHFIKGWINGSNSKMEVFITVVKTIDFGLVFD GIEVDVRDPMLVRPFYSSMLTHPLEFLIIGGFDIRRNDGTVASIQPGAEFAGPRVMNY FTMVVWPQGSS" gene complement(<474212..>479168) /gene="Cre-tpst-1" /locus_tag="CRE_13379" /db_xref="WormBase:WBGene00061559" mRNA complement(join(<474212..474357,475041..475377, 475421..475648,476655..476863,478364..478506, 479095..>479168)) /gene="Cre-tpst-1" /locus_tag="CRE_13379" /product="CRE-TPST-1 protein" /db_xref="WormBase:WBGene00061559" CDS complement(join(474212..474357,475041..475377, 475421..475648,476655..476863,478364..478506, 479095..479168)) /gene="Cre-tpst-1" /locus_tag="CRE_13379" /note="contains similarity to Brugia malayi Protein-tyrosine sulfotransferase A, putative.; TR:A8Q715" /codon_start=1 /product="CRE-TPST-1 protein" /protein_id="EFO94344.1" /db_xref="WormBase:CRE13379" /db_xref="WormBase:WBGene00061559" /translation="MRKNREFLLVLFLVVFILFYFITSRTSDDPYYSNRRNKFSGGGG EEYDRPAPHQLAVQSDDGYNRTSPFIFIGGVPRSGTTLMRAMLDAHPDVRCGEETRVI PRILNLRSQWKKSEKEWNRLQQAGVTGEVINNAISSFIMEIIVGHGDRAPRLCNKDPF TMKSAIYLKELFPNAKYLLMIRDGRATVNSIISRKVTITGFDLNDFRQCMTKWNAAIQ IMVDQCESVAPNCLKVYYEQLVLHPETQMRRITEFLDLPWDEKVLHHEQLIGKDISLS NVERSSDQVVKPVNLDALSKWVGTIPEDVVRDMDSVAPMLRRLGYDPNANPPNYGKPD ELVAKKTEDVHKNGAEWYKKAVQVVNDPARVDKPIVDSDAYGKS" gap 482159..482168 /estimated_length=10 gene complement(<487791..>488765) /gene="Cre-taf-7.2" /locus_tag="CRE_13380" /db_xref="WormBase:WBGene00061558" mRNA complement(join(<487791..488143,488195..488537, 488718..>488765)) /gene="Cre-taf-7.2" /locus_tag="CRE_13380" /product="CRE-TAF-7.2 protein" /db_xref="WormBase:WBGene00061558" CDS complement(join(487791..488143,488195..488537, 488718..488765)) /gene="Cre-taf-7.2" /locus_tag="CRE_13380" /note="contains similarity to Pfam domain PF04658 TAFII55 protein conserved region; contains similarity to Interpro domain IPR006751 (TAFII55 protein conserved region)" /codon_start=1 /product="CRE-TAF-7.2 protein" /protein_id="EFO94486.1" /db_xref="InterPro:IPR006751" /db_xref="PFAM:PF04658" /db_xref="WormBase:CRE13380" /db_xref="WormBase:WBGene00061558" /translation="MSITPGPRPLMKRGPKPQFFDDTPVPTTDDPPEFESHVVLRVPE DCVSRIEKIINTDGKLEEFSINLNADARNTTIRIGNQLLNGKILDLPTVTEVHKTLDN KSLYKVADVSQILVCTHDSINPAASSTSAPSDSTEDAQKLAKKAAKQWQYPHGLTPPM KCARKKRFRKTKKKKLMDAPEVEKELKRLLRADLEADSVKWEIVEGNKGDAGVGDEGV TQTQRHVTYPSSSEEDSDALADDDDKDDL" gene complement(<489677..>492560) /locus_tag="CRE_13381" /db_xref="WormBase:WBGene00061557" mRNA complement(join(<489677..489812,490059..490658, 492268..>492560)) /locus_tag="CRE_13381" /product="hypothetical protein" /db_xref="WormBase:CRE13381" /db_xref="WormBase:WBGene00061557" CDS complement(join(489677..489812,490059..490658, 492268..492560)) /locus_tag="CRE_13381" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94408.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13381" /db_xref="WormBase:WBGene00061557" /translation="MPFKLLHFPYLVQEKIYKEMTYSELFLMSVLSTRAKKSIQRVRF NTDKLRYIFAANGKSLQVSRNHNCDRITSMKEFPHLKKRDTCLVKFGDLEVRTKFRLY ESEGVTCNQMKVKYLDKEHQRAFQKYINCLFGYSKSNELHLNLDGDQMSVIDNISDTI VDGDTVEMSDLEEYFEKNPNQKSVYIQAKMNGELLKNSKLFGIENILIDNSNEFSASI LRNFTGRHLVFLGGAIFKTTDIIEFVRKWINNEAYQKLETVWIKMETEKSDIDMFGVQ ENLPVIEYNPLTRPPKYIYNPKIIDYGHGEINVGGYTYFDVVRKGDGKKASFKIIPMQ FIFLVWNS" gene <494284..>497350 /gene="Cre-elpc-2" /locus_tag="CRE_13287" /db_xref="WormBase:WBGene00061556" mRNA join(<494284..494977,495024..495427,495984..496569, 496638..>497350) /gene="Cre-elpc-2" /locus_tag="CRE_13287" /product="CRE-ELPC-2 protein" /db_xref="WormBase:WBGene00061556" CDS join(494284..494977,495024..495427,495984..496569, 496638..497350) /gene="Cre-elpc-2" /locus_tag="CRE_13287" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DT936625, DY527319, DY526485, DR780975" /codon_start=1 /product="CRE-ELPC-2 protein" /protein_id="EFO94440.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE13287" /db_xref="WormBase:WBGene00061556" /translation="MKIKEEFISASVNPRSHCLVACKSAPFVVYASSLQIALQTVPKV SFLVSFSLQDHKIVQDDSEVGVIKSTSERRHQKPITVLKRLKSSGKVDEFVSGDVNSR VNLWKLSGERVEYVAELLGCSGSIGTVCGVAEENRKIVAAAWVSYPNNGFEAWWTSPT GELLNSTKIELDQKAFALCLDAISLQNLVLLAVGTSKRFVELYGESEDRKSFSRLVSV AGHTDWIHSIAFNDDPYNLLVASAGQDTYVRLWSIEPESATHSEPPKIPAALLDEDTD TPDELTSSANLFTFNNSTLRCSSHAVMQGHDDWVHSTVWSENGRVLLTASSDKTCIIW REIDNLWRDDVRLGIVGGQAAGFFSAVFLNTDFFFPLWVTVQIFKFSDSETHSEDVVV SSSYFGGLHAWKSSDEQKTFWSSLPMTGGHVGEVRDVDWHESFLMSVGQDQTTRAFAK SEKQQVYLEIARPQVHGHDMQCLSFVNPSVFVSGAEEKVFRAFRAPKSFVKSLESITG IPAETSFGRSQLAEFGACVPALGLSNKPMVEGETVDGEHWEEDAFRAAPTILTAAPTE DTLQQNTLWPEEHKLYGHGYEVYAVTANPTGTVLATACKSSHTEHSVVMLWNTADWSK RTDIIGHQLTVTQIAWNPSGTILLTVSRDRTAKLYKEKTGDVNGFDYECVWTSGKEHT RILWACDWIDDQHFVTVARDQKVIVWSAEGAPKAQLKLDEPVTAVAASGDLVVAGLQT GELVVLRFTGENLEVIEKIGSNAIKIDAAVLRLRFSKCGRKLAVATSDAKLRVFDFTV " gene complement(<498295..>499183) /gene="Cre-rsp-3" /locus_tag="CRE_13382" /db_xref="WormBase:WBGene00061555" mRNA complement(join(<498295..498516,498570..498966, 499014..>499183)) /gene="Cre-rsp-3" /locus_tag="CRE_13382" /product="CRE-RSP-3 protein" /db_xref="WormBase:WBGene00061555" CDS complement(join(498295..498516,498570..498966, 499014..499183)) /gene="Cre-rsp-3" /locus_tag="CRE_13382" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1); coded for by the following C. remanei cDNAs: DR776414, DY526315, DT936194, DT934856, DY528449, DR781391, DY529586, DR779404, DR406998, DR781113" /codon_start=1 /product="CRE-RSP-3 protein" /protein_id="EFO94455.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CRE13382" /db_xref="WormBase:WBGene00061555" /translation="MPRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIKSGR GPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLNEEGGGYR GGGDFRGGRGGGRGGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD GTGVVEFTRYDDVKYAVRKLDDTKFRSHEGETAYIRVREDNSSGGGSGGGGGRDRSRS RSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRSPSRSPSPQ" gene <499820..>502176 /locus_tag="CRE_13288" /db_xref="WormBase:WBGene00061554" mRNA join(<499820..499847,499898..500061,500105..500245, 500535..500893,500963..501106,501157..501811, 501979..>502176) /locus_tag="CRE_13288" /product="hypothetical protein" /db_xref="WormBase:CRE13288" /db_xref="WormBase:WBGene00061554" CDS join(499820..499847,499898..500061,500105..500245, 500535..500893,500963..501106,501157..501811, 501979..502176) /locus_tag="CRE_13288" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily; contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94343.1" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="PFAM:PF07690" /db_xref="WormBase:CRE13288" /db_xref="WormBase:WBGene00061554" /translation="MPNEIRNNSGSPVVADSGKKKWITCGILLLVNLLNYMDRYTIVG VMSRLQPFFNIDDKQKGLLQTVFIVFYMIFAPLFGYLGDRYNRKMLMLTGIVIWIMAV FASSFCTKDHFQYFMLCRGIVGIGEASYSTIAPTILSDLFVGGMRSRILMMFYFAIPV GSGLGFIGGSKIALWTESWQWGVRFSPIIGIACLLLMIFLLEEPVRGSCEGARQSGDN ASFWEDVKYLLSVKSFCIVTVASTAGLFSIGAMSWWTPDFIKYSYGVTHKLAELPEDD KSSIDFIFGVITCCAGIAGVSIGSVVSRAWKDGTSIFRDYASEKADVYICALSMFIAL PFLYCAIYFAGHSTNASLVLVFFAITSMCLNWAVNVDILMYVVVANRRATALAVQTMI GHMFGDAASPYLIGAISDGMKDDSESISSKFFALQTALYLPTFVLVLAGACYLIATFY VEEDRMEALFQMDCKFGNLISKPEKFFSAADNWMHQNATEDMDALIPIDGNDIEKLPS DDEDTEDITIRFDRNQRKSGGTDAPNGEENTAYLSDETDEWDVQKRDSDEEEVI" gene <502697..>504591 /locus_tag="CRE_13289" /db_xref="WormBase:WBGene00061553" mRNA join(<502697..502769,502815..502947,503007..503121, 503171..503275,503323..>504591) /locus_tag="CRE_13289" /product="hypothetical protein" /db_xref="WormBase:CRE13289" /db_xref="WormBase:WBGene00061553" CDS join(502697..502769,502815..502947,503007..503121, 503171..503275,503323..504591) /locus_tag="CRE_13289" /note="contains similarity to Pfam domain PF00168 C2 domain; contains similarity to Interpro domain IPR000008 (C2 calcium-dependent membrane targeting); coded for by the following C. remanei cDNAs: DR780333, DY527911, DT935271" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94380.1" /db_xref="InterPro:IPR000008" /db_xref="PFAM:PF00168" /db_xref="WormBase:CRE13289" /db_xref="WormBase:WBGene00061553" /translation="MKPRRAPVIVKALDEGFQRPFVETDPYDDIQLEKVLKELSFIRI KLDQIVLPDINPFIQRLHNFREFFGFQLEYSFPCLDVVSKSLKTTVRIPEKEVDVMKI VFNHRRIVLLDMHQDQIEQWQKAQLTIHLLVNMSVNGRHTTRPLAKCHVRLSDLIFPP YIIHRDFDFVGEEFEGTAEIRIDLGSRVKSLMEKLNNLRGDRSLEDTFVVTEKSVGRR TRSRSSSRCRAHSSASSSGAPKAPSVGSRRPHSATSSVETPILTQRQQFFGENFNGNQ SLNRQNPNSTQNAPPRNELLRPRINSNSSIGSDSVFVRPTAEHPRVLEDMEIPESSRP RERITRTVTESYGASTVGDTVEEVTRHGGKYYMEVTVHEAIGLPPVEDESGRITSPSS YVSILGRDGDLRSPVFRNSRDPRWNFVARFAISSERRNLVIKVNHRGVVGDSALGYVT IPLPTTNVRKSVYEMTDVTRMAVKYTSQVPMLTISLEKIRNIDDVEGYEDYENHHRTF SRRTTSSRSTQSSPTRPAPPVVRIESPPILESSEVIKERMQRCMADLESMMRGMNT" gene <504971..>520664 /locus_tag="CRE_13290" /db_xref="WormBase:WBGene00061552" mRNA join(<504971..505033,505086..505323,506127..506454, 507681..508515,509479..509672,511649..511987, 512071..512157,512205..512280,513536..516366, 517316..517743,518476..519003,520231..520522, 520547..>520664) /locus_tag="CRE_13290" /product="hypothetical protein" /db_xref="WormBase:CRE13290" /db_xref="WormBase:WBGene00061552" CDS join(504971..505033,505086..505323,506127..506454, 507681..508515,509479..509672,511649..511987, 512071..512157,512205..512280,513536..516366, 517316..517743,518476..519003,520231..520522, 520547..520664) /locus_tag="CRE_13290" /note="contains similarity to Pfam domains PF00454 (Phosphatidylinositol 3- and 4-kinase), PF00613 (Phosphoinositide 3-kinase family, accessory domain (PIK domain)); contains similarity to Interpro domains IPR001263 (Phosphoinositide 3-kinase accessory region PIK), IPR000403 (Phosphatidylinositol 3- and 4-kinase, catalytic), IPR013838 (Beta tubulin, autoregulation binding site), IPR015433 (Phosphatidylinositol Kinase); coded for by the following C. remanei cDNAs: DY526733" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94492.1" /db_xref="InterPro:IPR000403" /db_xref="InterPro:IPR001263" /db_xref="InterPro:IPR013838" /db_xref="InterPro:IPR015433" /db_xref="PFAM:PF00454" /db_xref="PFAM:PF00613" /db_xref="WormBase:CRE13290" /db_xref="WormBase:WBGene00061552" /translation="MRDIEDFVFTNKQCLAVCIAKNENTKLSQIFQLLALDDKEEQFE SQPLSHNVRCSLIGIANFLLNSHGKFAEELVPMLLRALSALPHMKWIDDGLLNKSDRI PIQEQFSFCFNTSLSDLAAHLPRYRDQIIAAQTDALACAVSAVYDLFDDEENLEHNYS HVVKLMCYVLGLTRSIGRFSTDYDTPLISLIFPLPMDETKKLKGNKAEDCLHRISSDE FTFDTPENSEAILLDKTRLIRMYNKLGASFLVHNFTGGLKLEMCAQDLEKLFDSVQRL MDSKFLETLDAISGDIFQNGGSVKRNPYKSMSEIVNLCCLTLLKDVLGPYEVSKDEEK SPVSEKFAKEISIFSKSALQRLDSELQGLQHSSEPTMTLNSEVSRQKLNIQSATVSLQ LIAWAAVDDIDADTICTEIITRLFANQSQRTIISQLPLYLKAISSMATLAEKFPAVAT TAVNQNLQRFLLEPAPMLTKLASDSTLERGKSAGDVIQNSKSSNNLNDATSKRKLVLD SLRNSAIKAICRALKSSIRMESDSVQQCLAGLSTKLFVCSNANNFVVSLVCENAIQTL GGIGVGLVDSTAVEVPEMVVQIYLQRFANPPSQLDVTMIRCLAEMWIAGAVKINFFGD QSEILQRSIYENVWKLFTQICIESSNRVYSQGNNDSNDQRYTHVSLAVDMAMSRMAIG VKNEDDKMTLLVRLLELFVQLGIEGRRVGEKVSKSTVKMSTSAGNLGVLMPKIASLLR RMQPISEPTPKLRSLFRDFWFYCTVLGFDVESSSLWPEEWYNAVCETATKTPVLIATE NLRSELIDNAAIRSDSISPQELQEMRNTVLAELSHQAEAVPLINRFDFANCTYLLSVH RMESMRLIHANHVDAFSSFFKYIEDKTVRKDKSGLWTCMLAAAPRIFLSWCEKMMKRR DNDEPTEEALVWHAQFLLFKFNHHLREVRKVADACLSQLVKAFPYLLWNTEVLTTILR LLQELEDNLLKDPTCREPQFTIEGFEKGWTIQLQDSIEGRRAVVKDFSMRVKQILKEA LMWAPASTHSNLLEYVSKFGSERDAAMQLAIDATSEGKGKSGSYLTSLYKRSNYLGQV KGMLATTLSGDIDQVTAENKLIDRLEKDFQRACKSGKDNEMEQAVLLLTALFVSLRCL NERILTLLVRTPLHNFTESTISLCTMAWNWLLSARPEAHSLFLHEQARAFADSCRFGL GLFEKENVDMSLSPLCRQVERPPPSANFRPHREWIEFIGERCDVASYSSREQLDVLEM MFSQTLSAQIGTGHLHGSTACNTSNLTGTTKRETINQVTRGIEAVGVRFRLLSCVLGM VQQDACLLRPTNVLIRQRVYSSAFHYFTMAPQGPTQAEEALREDIRLLAKFFDHLKSD KHYMIKETMAKTDKNIVMSSTMSHMQTAFEKSLLVTAGGSISTGTNGTPTTTLMLPPT TNYANTLTLSQKSMAAATASIRSGKSIEAKLSIEEDRRIKTWMKQRNMLMLLVANEIE RLSAWLHPLALAQEDCTLESEQFLRSQILDIQGTGGSSSENKKKKIWREQAELAWSIS PELAIQLPSRFRGSEDLIKCVEGLVRSQPELVAHIPEALPLFLGNGSTVFETADMSHV LTWARCSPVMALSLLTPRQYPTHPISMQYAVRVLRSYPADALLMYIPQIVQAVRYDTM GYISELMIWLAGHSQLLAHQLIWNMQTNMYTDEESKIKDSALFDPLNDIMQKIISQLE GAARRFHEAEFKLFHQLTAISGTIKPFPKGDARKKACLKALADVKIETITYLPSNPEA VLLDLDYSSGTPMQSAAKAPFLARFRVKRCGVRELERIGLQAQSEKEEKSTDADLEKL RKVQDSRVCWQAAIFKVGDDVRQDMLALQLMQLMKNVWAGLGLPVRVFPYRVVATSPG CGVIECVPNSKSRDQLGRQTDFGLYEYFKTQYGDESSETFQEARRNFVRSMAAYSVFS FLLQIKDRHNGNIMIDLDGHIIHIDFGFMFESSPGGNLGFEPDFKLSEEMVAIMGGKM EAAPFRQFASLCVHAYLAVRPYHKSFVSLVSLMLDTHLPCFRGKTINQLRARFAPDMN EKDAAKKKKAEIFRYMHSVITNCFLNIRSKMYDQLQYFQNEIPY" gap 510653..510662 /estimated_length=10 gene complement(<520907..>523590) /gene="Cre-cpf-2" /locus_tag="CRE_13383" /db_xref="WormBase:WBGene00061551" mRNA complement(join(<520907..521211,522133..522478, 522948..523092,523205..523326,523423..523478, 523527..>523590)) /gene="Cre-cpf-2" /locus_tag="CRE_13383" /product="CRE-CPF-2 protein" /db_xref="WormBase:WBGene00061551" CDS complement(join(520907..521211,522133..522478, 522948..523092,523205..523326,523423..523478, 523527..523590)) /gene="Cre-cpf-2" /locus_tag="CRE_13383" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1); coded for by the following C. remanei cDNAs: DR777632, DT935977, DR782090, DR778306, DR408500" /codon_start=1 /product="CRE-CPF-2 protein" /protein_id="EFO94504.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CRE13383" /db_xref="WormBase:WBGene00061551" /translation="MMSGGYKPSGQLNERSQRSVFVGNISYDVTEETIRAIFAKAGHV MSIKMVHDRETGKPKGYGFIEFPDINTADTAIRVLNGYELGGRVLRVDSAAGGMNMEE FGSTNTGPAPVEENPYGPECDAGKAPERISQTVASLAPEKMFELMKQLQEALKNNPAE LNSVLVENPQLSYAVLQAAVVMRIVDPQTALGLLHRNKAATMTPFHQTGAPGGVGGVP PQMIPPQQSQQQMPLPIPPKPTFAHPGVGPSMGPPMGHPQGPPQYGRPPMLPTPQQQQ QYMPPPQQQMPLQTRPPVQHQPQEDQEEHQNAQLLMQVMQLSEHDLQMLPPGDRDKII ELRQQLKRNVK" gene <532297..>537915 /gene="Cre-unc-64" /locus_tag="CRE_13291" /db_xref="WormBase:WBGene00061550" mRNA join(<532297..532310,532405..532504,533593..533692, 534822..535082,535672..535883,535929..536039, 536177..536343,536403..>537915) /gene="Cre-unc-64" /locus_tag="CRE_13291" /product="CRE-UNC-64 protein" /db_xref="WormBase:WBGene00061550" CDS join(532297..532310,532405..532504,533593..533692, 534822..535082,535672..535883,535929..536039, 536177..536343,536403..537915) /gene="Cre-unc-64" /locus_tag="CRE_13291" /note="contains similarity to Pfam domains PF00078 (Reverse transcriptase (RNA-dependent DNA polymerase)), PF00804 (Syntaxin), PF05739 (SNARE domain); contains similarity to Interpro domains IPR000477 (RNA-directed DNA polymerase (reverse transcriptase)), IPR006011 (Syntaxin, N-terminal), IPR003286 (Nematode reverse transcriptase-like), IPR000727 (Target SNARE coiled-coil region), IPR006012 (Syntaxin/epimorphin, conserved site)" /codon_start=1 /product="CRE-UNC-64 protein" /protein_id="EFO94404.1" /db_xref="InterPro:IPR000477" /db_xref="InterPro:IPR000727" /db_xref="InterPro:IPR003286" /db_xref="InterPro:IPR006011" /db_xref="InterPro:IPR006012" /db_xref="PFAM:PF00078" /db_xref="PFAM:PF00804" /db_xref="PFAM:PF05739" /db_xref="WormBase:CRE13291" /db_xref="WormBase:WBGene00061550" /translation="MTKDRLAALKAAQSEDEQDDDMHMDTGNAQYMEEFFEQVEEIRG SVDIIANNVEEVKKKHSAILSNPVNDQKTKEELDELMAVIKRAANKVRGKLKLIENAI EHDENQAGAGNADLRIRKTQHSTLSRRFVEVMTDYNKTQTDYRERCKGRIQRQLDIAG KQVGDEDLEEMIESGNPGVFTQGIITDTQQAKQTLADIEARHNDIMKLESSIRELHDM FMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVADTKKAVQYQSKARRTKCYIFVLIV VVILVIVIAVVVWVVVSNAATSVVVAPVKPSSSSSSSSSSQRFRVRNNISPSELFLPW IIENTLRKVPPRCGFTTHHANFYIIRNCATTLAIPLSIIYSDSFLKSHVPASWKHAII IPIPKKGSLTSPENYRPISLTDPFSRVCERILCNYIKINLFRNISRFQHGFLSKRSCS SSLVHSISEYRLLLSSHKSLDVVYFDFRKAFDQVDHQFLISKLDSFGIPSNIISWLTD FLSDRTFSVKIDDFVGTPSASIPSGVPQGSVSGPLLFLVFINDLLLKLADISSLCIAA FADDIKLYSHDPLALQMGIDLVESWASDNSLPLAHSKTALLRLGPRNSSHPYTIGGSL IDSVDSVRDLGLLIEPNLKFTRHINRAVALALLRSKQLLKSFKSNSPQFYIFLFKTYV LPLVEYCSVVYSPPPSSKLAHKLETPLRFFSRKILQRCNTPYCSYSDRLSQLDLFSMR HRRLKAQLLLLYNLIIGASYFPSLETHVRLSSSSRRPMSLICINPNCSNFFSTVIPIW NALTINVPHFLCPSEFNSLLVNNIARF" gene complement(<540476..>544008) /gene="Cre-set-25" /locus_tag="CRE_13384" /db_xref="WormBase:WBGene00061549" mRNA complement(join(<540476..540533,540587..540787, 540832..541328,541382..541552,541605..542009, 542048..542432,542484..543632,543893..>544008)) /gene="Cre-set-25" /locus_tag="CRE_13384" /product="CRE-SET-25 protein" /db_xref="WormBase:WBGene00061549" CDS complement(join(540476..540533,540587..540787, 540832..541328,541382..541552,541605..542009, 542048..542432,542484..543632,543893..544008)) /gene="Cre-set-25" /locus_tag="CRE_13384" /note="contains similarity to Pfam domain PF00856 SET domain; contains similarity to Interpro domains IPR001214 (SET), IPR003616 (Post-SET zinc-binding region); coded for by the following C. remanei cDNAs: DT935509" /codon_start=1 /product="CRE-SET-25 protein" /protein_id="EFO94373.1" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR003616" /db_xref="PFAM:PF00856" /db_xref="WormBase:CRE13384" /db_xref="WormBase:WBGene00061549" /translation="MSAYDITQYKTPSELAELVMNGSDSGSDSDVEVIAVINKKADNN VAPERRKSVPSEETSEKEIKREEEEEVIEELRRRTINVALEEEVKENRNSSQTNVKSP LKMASTTTSPRTPSKDNKSLRERSQRSRATPTNSAPSSKKRPAVSSSSAKSSPRDKPS TSSNQSSILRYLTPTTTPKQDGTPSKMPRTDSSTLTSPRRATSTRTPSSILTATVSPR NHNRDTVQANVKSPRPRTVSFGCSTSENATSSGPSTTAHGAAKRVRPLSESSPPNGPS TSSGIPSKRRSENINRRDSLNIPVLRARQDLNLTTSSSTPSSSTSTTNFNARRTRTEG VSRRSTDRAVPPPTTTQQSRQTDPRRGSNLKRKAPETSEIQPPKVIKTIVEHTEPVAP PTISNDPDELRLIAYYSDEEPEDPITVEDTGRRHEKLLRVPVALITHPDLEETRYPPS RRGNKNKTNKRRKKASEEETTTVETSKNLSYRVNRRVKVIRKFVPRIPKSCFEALRAS ELGSSERKRPFTGIPSRKFDTRDNKQYGNGQKMNWDVQAVYQFQCEDDAEYSFVLYEG WTSTSMDRQKNSELLVTSKEMLELAVIRDTFLAAFKKRAEQKAREFVAKSAEKGEIVS FETALERFYNKWAPPRETWRPFWLHEDVTYFHTLHHKEHILGPIWYMDLINASAEKPP EYGYTAVNILTYEAYMHCKNSSASLPFEQLAEKIIGKNYVFLPASEGSCENLLGCKCT ARFELLYGAHNPNNVYTKTKEILLQKDGTIDLTGYYFDLSRVIVECSDECGCSWRCPR RRLQQGQTKPVVVCREHGKGYGLRAAQSFKKGELVCEYTGNMFMLDPDEIHPIYTIPF RTEKIEERNAKQKKQVEEPRREEKKEPPRDASYEAALNVTGREMVICAKNNGNIARFV NHACDPNTAFFEVDSRRYIEDPLIPRVAIYAIKDIELAEEINVAYWDPLLKYSKLSTL ECDCGAEKCIKFLPTENTTID" gene <544313..>546860 /gene="Cre-npp-18" /locus_tag="CRE_13292" /db_xref="WormBase:WBGene00061548" mRNA join(<544313..544387,544657..544767,544816..544877, 544931..544998,545051..545438,545956..546212, 546721..>546860) /gene="Cre-npp-18" /locus_tag="CRE_13292" /product="CRE-NPP-18 protein" /db_xref="WormBase:WBGene00061548" CDS join(544313..544387,544657..544767,544816..544877, 544931..544998,545051..545438,545956..546212, 546721..546860) /gene="Cre-npp-18" /locus_tag="CRE_13292" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DY525050, DR779078, DY526720, DT935774, DR781571" /codon_start=1 /product="CRE-NPP-18 protein" /protein_id="EFO94498.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE13292" /db_xref="WormBase:WBGene00061548" /translation="MTGDNTEGPVEPYKTVGAHRDLIHCVSFDPHGRRMATCASDMTM AIWDRQPNGNWRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVVWEEQIVRSE KDLKSKESQWIRRTIISDNRSDVTDICFSPRHLGLMMASCNVLGAVRIYEAPDVVDAS RWNLIHELQAFHTRCGCVTWSLSRMHRPLIAVGSDEKKAGGKERVVIYENIDGLRKWH RIHSLVFDLPCPITDLKFSPISMVDSHQLAIASGDVNIFNIKVARSAILEEEGVDNPI TLADYNVQRVALLGDHRKAWRIRYNLMGSVISSTSLDGTLRSWKSLFVNQWVKLSEMN VDDYVPSPEEVRALVASKTTERLPEQLDQNYF" gene <547341..>549131 /locus_tag="CRE_13293" /db_xref="WormBase:WBGene00081195" mRNA join(<547341..547654,548381..548782,548834..>549131) /locus_tag="CRE_13293" /product="hypothetical protein" /db_xref="WormBase:CRE13293" /db_xref="WormBase:WBGene00081195" CDS join(547341..547654,548381..548782,548834..549131) /locus_tag="CRE_13293" /note="contains similarity to Pfam domains PF02879 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II), PF02878 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I); contains similarity to Interpro domains IPR016066 (Alpha-D-phosphohexomutase, conserved site), IPR016055 (Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III), IPR005841 (Alpha-D-phosphohexomutase, N-terminal), IPR005844 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain I), IPR005845 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain II)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94366.1" /db_xref="InterPro:IPR005841" /db_xref="InterPro:IPR005844" /db_xref="InterPro:IPR005845" /db_xref="InterPro:IPR016055" /db_xref="InterPro:IPR016066" /db_xref="PFAM:PF02878" /db_xref="PFAM:PF02879" /db_xref="WormBase:CRE13293" /db_xref="WormBase:WBGene00081195" /translation="MPIACPTLNEQVANWLNWDKNETTRGEIQKLVDDMNEEGLKARM TSRLVFGTAGVRSPMQAGFGRLNDLTIIQITYGFARHMLNVYGQPKNGVAIGFDGRHN SRRFAELAANVFIRNNIPVYLFSEVSPTPVVSWATIKLGCDAGLIITASHNPKEDNGY KAYWSNGAQVLIQIEYLFQVSVQIIGPHDTEIVRIKEAEPQPRDEYWDLSELKTSPLF HSADVTIDPYFEVEKSLNYTREINASTPLKFTYSAFHGIGYHYTKRMFAEFGFPASSF ISVAEQQEPNPDFPTIPFPNPEEGRKVLTLAIETADKNGSTVILANDPDADRIQMAEK QKK" gene complement(<549196..>549834) /locus_tag="CRE_13385" /db_xref="WormBase:WBGene00061547" mRNA complement(<549196..>549834) /locus_tag="CRE_13385" /product="hypothetical protein" /db_xref="WormBase:CRE13385" /db_xref="WormBase:WBGene00061547" CDS complement(549196..549834) /locus_tag="CRE_13385" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94445.1" /db_xref="WormBase:CRE13385" /db_xref="WormBase:WBGene00061547" /translation="MAFFSLPIPFSEYSAPVDKHAAEKKKIFDLATLLREEVSRFLEQ QVDVQEDRENPTRPRLPIFFVKGFNALKSKEAALNNYKCPYLNVLPYTIQMQLLTEFG PSEDYPKLDENGCFIETPKPVMEEIEQLEEDLIDFVTNHYICTGDMGHLPSSLYPTMK DIANKLLTTEDEEAEDRMFSLDANVEDEILERTGELLEDNCIIRMLKRCFNL" gene <550073..>551808 /locus_tag="CRE_13294" /db_xref="WormBase:WBGene00061546" mRNA join(<550073..550098,550375..550538,551153..>551808) /locus_tag="CRE_13294" /product="hypothetical protein" /db_xref="WormBase:CRE13294" /db_xref="WormBase:WBGene00061546" CDS join(550073..550098,550375..550538,551153..551808) /locus_tag="CRE_13294" /note="contains similarity to Interpro domain IPR016055 (Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III); coded for by the following C. remanei cDNAs: DT934929" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94374.1" /db_xref="InterPro:IPR016055" /db_xref="WormBase:CRE13294" /db_xref="WormBase:WBGene00061546" /translation="MIIYQVRYNGDWRVFTGNEMGALITWWIWTNWRKANPSADASKV YILNSAVSSQIVKTIADAEGFKNETTLTGFKWMGNRAEELRAEGNQVILAWEESIGYM PGHTLDKDGVSAAAVFAEIAAFLHTQGKSLEDQLYALYNKYGFHLVRSTYWMVPAPEV TKELFSTLRADLKFPTKIGDADVASVRDLTIGYDNSKPDNKPVLPLSTSSEMVTFFLK TGSVTTLRASGTEPKIKYYIELITPPGKTQNDLESVISELDQLEKDVVATLLRPQQFG LIPRK" gene <552372..>553010 /locus_tag="CRE_13295" /db_xref="WormBase:WBGene00061545" mRNA <552372..>553010 /locus_tag="CRE_13295" /product="hypothetical protein" /db_xref="WormBase:CRE13295" /db_xref="WormBase:WBGene00061545" CDS 552372..553010 /locus_tag="CRE_13295" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94466.1" /db_xref="WormBase:CRE13295" /db_xref="WormBase:WBGene00061545" /translation="MAFFSLPIPFSEYSAPVDEHAAEKKKIFDLATLLREEVSRFLEQ QVDVQEDTENPTRPRLPIFFVKGFNALKAKEAALDNYKCPYLNVLPYTIQMQLLTEFG PSEDYPKLDENGCFIETPKPVMEEIEQLEEDLIDFVTNHYICTDDMCLLPSSLYPTMK DIANKLLTTEDEEAEDRMFSLDANVEDEILERTGELLEDNCIIRMLKRCFNL" gene <553560..>553900 /locus_tag="CRE_13296" /db_xref="WormBase:WBGene00081193" mRNA join(<553560..553622,553673..>553900) /locus_tag="CRE_13296" /product="hypothetical protein" /db_xref="WormBase:CRE13296" /db_xref="WormBase:WBGene00081193" CDS join(553560..553622,553673..553900) /locus_tag="CRE_13296" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94355.1" /db_xref="WormBase:CRE13296" /db_xref="WormBase:WBGene00081193" /translation="MGAPVGGEKDVELISKSVETKTIETKHETPYGGVKWSSELALKD FADPVYDVVDEHILDKKTRSKVSSKSLQILAAPRKRSFEAKKANGGIQQPRK" gene complement(<554071..>560067) /gene="Cre-tim-1" /locus_tag="CRE_13386" /db_xref="WormBase:WBGene00061544" mRNA complement(join(<554071..554241,555232..555770, 555931..556344,556957..559730,559775..559928, 559986..>560067)) /gene="Cre-tim-1" /locus_tag="CRE_13386" /product="CRE-TIM-1 protein" /db_xref="WormBase:WBGene00061544" CDS complement(join(554071..554241,555232..555770, 555931..556344,556957..559730,559775..559928, 559986..560067)) /gene="Cre-tim-1" /locus_tag="CRE_13386" /note="contains similarity to Pfam domains PF04821 (Timeless protein), PF05029 (Timeless protein C terminal region); contains similarity to Interpro domains IPR007725 (Timeless C-terminal), IPR006906 (Timeless protein); coded for by the following C. remanei cDNAs: DT935414" /codon_start=1 /product="CRE-TIM-1 protein" /protein_id="EFO94385.1" /db_xref="InterPro:IPR006906" /db_xref="InterPro:IPR007725" /db_xref="PFAM:PF04821" /db_xref="PFAM:PF05029" /db_xref="WormBase:CRE13386" /db_xref="WormBase:WBGene00061544" /translation="MNVLIQGAVQALGYCEDGKYHREPDCYETIRDLIRYLREDGEDY TARIECGRHNLVEHDLVPMVKCEDLSDDEFDIAIRLMVNLCQPAISTMRGKAPSDRDQ WKMYWELEENLRRAKNAFTDAYFFTAIKKRIDNYFIETDFDDRDERLRLVVERIVLLI KYVFSINQDTSEGRRTRIEDSSHDRVILAFLESGIDKTLMHIANQPREKEFHITILDI FALILKEQCPENLSKPEDDPEVSTAEKKKTEEEFRKIIENHVVKETQKRKSFSRFGGS YTIKGLKGIASNSTQVVFKPIQNVEKHNFLDERKQKKRVARNRRPFEIDSNTHFASSE VRRMLRDMVIRLIETCFNRLMKSAKSTVFVQGHVIHKTSQINYFFMVKFILRFVRMSK QDPLFERISECTGVEAFHENNVQLTEYVENATTLKGVEAKSYGLKAQYALGAYNELVL LHRHIVEYGKDEGEKKRARRALEHVVNVEEYRELPISILKKFSTSVLSNNFLRELVLT THHYMKLVERFVKTGALKKVTKKVKVRKNHQKKSSPEDIRSEFDKMTVDSLEALWEES KETLLQILKKEIPEMDDMNPINPQLEVSPEAHQKFAKLFIQRSLRSRGFPAAVGLYHA SRRIWKDSHSFSGLEEDATVEDELDELYQILKMDLKKVARELKKAEEKVGSEFDRFDK MTPESIESLWEDPKVQELLLQILNKEVPELEDANPLNWQLEVSPETQQQFAMLSIQRA LRSNDLPKAIGLYHSSRKLWPDENFFGAPEITVEEEVTELEGILKADLAEVVKEMKIA EDVANKKLDDVDGDMAREYGDEMNSEDEDEAPAWKTEEIDFQFDLYVSKYANADVLKW YVFLLNDFSKNGVDLNQALVKMLHRIAFDLKLPTKLYQVSLFQVLQKVNQHFTNLTKE LRKTSPFYELYQFGFHLLKKFFAKFAEMGPELAIEALFWKGPKECFEIDNGYGSWIKS KEADIKVWTEELESEIRHLYDEYTTVESREDGIDVLDFIEHNLSRARSRKQIAKKLIE FGLDLLGAKWKNLEKAQMDSVLPVGDIQKVYDEWKSGGSEGDLVDILKEKLTESLGSE ISRKKIIKQLAHMDILYEKPKKERPLPEWDSGLIEELTGLKEQFDEIEDAENLLGVDI VSYVMKRLSVKKPTRQVERYLASMGAKIVERPKNSSRKSEKPRKKMSEYEAFLNDSSD NEEPIREDSEPEDDAEEPKIKKKKRAVLESDDDDDEVVTTKSKSPVDSREPSIEKSPP KNTLMSRIMNKKRKLAQLESDSSDSEDESQGQEKEKKEDEKEKDSDDDSDGEDDAVIY KRRYVDALLTSGSVAGGRITRDTSEEPEEKEEEQEDPFSTKIKFKRRIVMSDNEDDD" gap 554653..554662 /estimated_length=10 gene <560628..>560933 /locus_tag="CRE_13297" /db_xref="WormBase:WBGene00061543" mRNA join(<560628..560751,560797..>560933) /locus_tag="CRE_13297" /product="hypothetical protein" /db_xref="WormBase:CRE13297" /db_xref="WormBase:WBGene00061543" CDS join(560628..560751,560797..560933) /locus_tag="CRE_13297" /note="coded for by the following C. remanei cDNAs: DY525911" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94356.1" /db_xref="WormBase:CRE13297" /db_xref="WormBase:WBGene00061543" /translation="MGAKIVKLINEDSSLEDGSDFDRVRDLEEGEESSSWDSSSSSGV EEVYDSESCSSEYKPSGEDPYFVEKRFIAGSNQYFYNIVKRK" gene complement(<561036..>562156) /locus_tag="CRE_13387" /db_xref="WormBase:WBGene00081220" mRNA complement(join(<561036..561183,561309..561751, 561804..562032,562080..>562156)) /locus_tag="CRE_13387" /product="hypothetical protein" /db_xref="WormBase:CRE13387" /db_xref="WormBase:WBGene00081220" CDS complement(join(561036..561183,561309..561751, 561804..562032,562080..562156)) /locus_tag="CRE_13387" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR000886 (Endoplasmic reticulum, targeting sequence)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94477.1" /db_xref="InterPro:IPR000886" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13387" /db_xref="WormBase:WBGene00081220" /translation="MPPPNLLEVPELPLQMIIDYLTPAATVNFALSNEKIREFIETIN LNLETISLKITEKRCTITLVFFYSEKSLVWKFVSTPSNDRPRPNLKIKVCENPLDFCI KAVNWLTKLTRFPVTSVTIEGPDFQGTRELLEWEAIRECERLTMSLIDEMSGNLDDFK DLEYIDLVGCDWMTPEILESCQAKTISLFSVNWTLEQIIQIIRNWLENTENRKLEYLS VAFKDSRDDALTIIDAFNTKPWDRMMRHPTYPRRNTGVPLDLSGARDIERSDGLLASI LVDSDGVDFVVWHDRFPVQEEL" gene complement(<562595..>566635) /locus_tag="CRE_13388" /db_xref="WormBase:WBGene00061542" mRNA complement(join(<562595..562689,562738..563030, 563089..563308,563519..563677,565958..566246, 566295..566391,566442..>566635)) /locus_tag="CRE_13388" /product="hypothetical protein" /db_xref="WormBase:CRE13388" /db_xref="WormBase:WBGene00061542" CDS complement(join(562595..562689,562738..563030, 563089..563308,563519..563677,565958..566246, 566295..566391,566442..566635)) /locus_tag="CRE_13388" /note="contains similarity to Pfam domain PF00560 Leucine Rich Repeat; contains similarity to Interpro domain IPR001611 (Leucine-rich repeat); coded for by the following C. remanei cDNAs: DT935820, DY524841" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94407.1" /db_xref="InterPro:IPR001611" /db_xref="PFAM:PF00560" /db_xref="WormBase:CRE13388" /db_xref="WormBase:WBGene00061542" /translation="MTTPKYNLTELRNLQEDDELDLSASAIQDFPKAITQLTRLTKLD LSSNRIAFLPESFCTMDKLIRLDLGNNQLHHLPDGIGLMKSLQHLNLYNNKLEDLPLS FGNLKSLKWLDLKKNPINKPLLAIAGNCGTDAECKTAAKQVVNVYMGEKQKEFAHKKA QEAKLKEKVAKAQQEEKIRKHQEKKQKEAEMKQEKDAKQREQASNNKSQQHTPPHKEH QKPHKKETSHNKASDAKKTEKPRGFFRKLFGFIWTCFFYLTIILATSSTIAIGLDCKG LGTPIPGTAPLCKDLSLIGTGNKPSAAFVQNAKKAYGQVLTGYHNQLKPHVAPVQASI SKQWKQFAKTDIGKKVESIAFQVHTWIVDKWVKVQRFVQQQWAKIQAWWKSTGQKQFG PALEGFMIGLKMVFQIVADIARNVAGLLVHFVARVKTFFLAWSDGGFNAAMNTLNH" gene complement(<567212..>568123) /locus_tag="CRE_13389" /db_xref="WormBase:WBGene00081216" mRNA complement(join(<567212..567535,567592..567711, 567767..567864,567943..>568123)) /locus_tag="CRE_13389" /product="hypothetical protein" /db_xref="WormBase:CRE13389" /db_xref="WormBase:WBGene00081216" CDS complement(join(567212..567535,567592..567711, 567767..567864,567943..568123)) /locus_tag="CRE_13389" /note="contains similarity to Brugia malayi 2310042L06Rik protein, putative.; TR:A8PCI4; coded for by the following C. remanei cDNAs: DR408239" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94459.1" /db_xref="WormBase:CRE13389" /db_xref="WormBase:WBGene00081216" /translation="MRRRSITTRQLPFVLLLLSTVFVVIFAKIDHVKEKTAETHGDAT KLKAKEAPEHIDHKKLFTENFKQRRSEHKAAIESIKGIGKDKTRLFLEDLLKNIKNLL KESRETLERTAHLADSPFPHSSDLLKDALSKLHENTALFTDLSLAFSKFFETKVQKDR KLKTLLVWAYNYSIKTGIFDSETEKKVNLMAQQHELIEKDEKFFNSYDKERVKEDMEA EEAQRKQKKSKKAENKQPKGEL" gene complement(<568606..>575882) /locus_tag="CRE_13390" /db_xref="WormBase:WBGene00061541" mRNA complement(join(<568606..568779,568829..569001, 569046..569317,569365..569472,569506..570059, 570672..570793,570839..570933,571236..571325, 571385..571534,572130..572239,572295..572657, 573571..573849,575847..>575882)) /locus_tag="CRE_13390" /product="hypothetical protein" /db_xref="WormBase:CRE13390" /db_xref="WormBase:WBGene00061541" CDS complement(join(568606..568779,568829..569001, 569046..569317,569365..569472,569506..570059, 570672..570793,570839..570933,571236..571325, 571385..571534,572130..572239,572295..572657, 573571..573849,575847..575882)) /locus_tag="CRE_13390" /note="contains similarity to Pfam domain PF04547 Protein of unknown function, DUF590; contains similarity to Interpro domain IPR007632 (Protein of unknown function DUF590)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94383.1" /db_xref="InterPro:IPR007632" /db_xref="PFAM:PF04547" /db_xref="WormBase:CRE13390" /db_xref="WormBase:WBGene00061541" /translation="MMRTDENIQRYDVPVREYRMLAATTEVDYPYFPFRISIDFVLVH NASESHSKGKYREFFEKAVQKEGLIIRHQMSGQTHFTLISTPFHRLSREAESSQMCFP LKDCQVKPGMPSCCIPLSKIFVTDDTVRFINAPFQRKHGALFVNYHDEKSFFTPAQRG YLTYQILTKIDISKDLKHERLGDSQDLPDQSTTSITSDEQLRRKGLTWLLMRDVYEEA FVLHAPSKEEPYFKAMQNGSVKTYNEVISEIELDPRKSLSNAWERWYKFQPLNKIRDY FGEQIAYYFAWQGTFLTLLWPAVIFGFIVFIYGFVDSISSSPLDWNHCKVVKFNGETE NVACGMRNGLTLFFSMLTQWFMSSFDTKMNAFFAVFMSIWGSVFVQIWKRNNSVLSYQ WNSDDFHAIEPDRPEFRGSKMKEDPITGEDIWISPALFRYLKMIGSFFFVSFSMLIVI LSLMLVTLLKIWMVYNFQCTKEYTFHCWLSAAFLPSVLNTLSAMGLGAVYSNLVARFN AWENHRTESEHNNSLIVKIFAFQMVNTYTSLFYVAFVRPESHGLQPNGLFGLGKEFKD TCLDDTCSSLLALQLLTHTLIKPVPKFLKDVVIPQFSYFVKLFRLRMYTSRTEATRIE AEEDDQANVLVREWLKPSAGDFVLWEMNEKIIMFGTTMMFASLFPLAPLLALIIGFVD MRIDAHRLIWFNRKPIPMITNGIGIWLPILTFLQYCAVFTNAFIVAFTSGFCSTFLAD NEYCTVQNRLIIVIVFQNLVFGLKYLLSSVIPSVPASIKVALRKKRYVVAHIVEKGDV PHKTRIKKRTRIAKLAWITSNQRVQRGKKKETPLKNKRLLAED" gene complement(<576424..>577485) /locus_tag="CRE_13391" /db_xref="WormBase:WBGene00081213" mRNA complement(join(<576424..576971,577027..577100, 577193..>577485)) /locus_tag="CRE_13391" /product="hypothetical protein" /db_xref="WormBase:CRE13391" /db_xref="WormBase:WBGene00081213" CDS complement(join(576424..576971,577027..577100, 577193..577485)) /locus_tag="CRE_13391" /note="contains similarity to Pfam domain PF06542 Protein of unknown function (DUF1114); contains similarity to Interpro domain IPR009497 (Protein of unknown function DUF1114)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94453.1" /db_xref="InterPro:IPR009497" /db_xref="PFAM:PF06542" /db_xref="WormBase:CRE13391" /db_xref="WormBase:WBGene00081213" /translation="MSVKNHSVTEILYAKVFTNQHLLENILSYLSDDFKKNLDVRLVN KSINHKFLRLIRRNHRTMKIEYAYNVENVITRSKDFIYINYRKINNQDVLPYFIKLWM LEKKFMRRLHDIIHSQLIENGTHIQTVIGLEEACDGCEKCSNTAKKCLEYGPLRFSTL QTMTHSKNYKKLHVTDKLFEVIAEYCISRSKNKKECFEELDKTILSTISCEKLVIWIN ESRVLLNERTRPKFNHRHMPREVIDIILKKWSVKSIKLNILHFTNEPVCSLEWLQYDY FSRVRLNDPYSETEQSGKAVSPNLFENW" gap 578177..578186 /estimated_length=10 gene <579085..>579423 /locus_tag="CRE_13298" /db_xref="WormBase:WBGene00081209" mRNA <579085..>579423 /locus_tag="CRE_13298" /product="hypothetical protein" /db_xref="WormBase:CRE13298" /db_xref="WormBase:WBGene00081209" CDS 579085..579423 /locus_tag="CRE_13298" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94437.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13298" /db_xref="WormBase:WBGene00081209" /translation="MLSFNIEHVHFTRSISKKLFNRFLKHWIRGSNPRLQCMFLSIDK IDSVNGEIYLKGIDWIEMSEEAKRDIRQKRRLSVSVDMIQIRRTDGTTAVIGTNDSGN ILHVRFIVLH" gene <579773..>581411 /locus_tag="CRE_13299" /db_xref="WormBase:WBGene00061540" mRNA join(<579773..579852,580517..>581411) /locus_tag="CRE_13299" /product="hypothetical protein" /db_xref="WormBase:CRE13299" /db_xref="WormBase:WBGene00061540" CDS join(579773..579852,580517..581411) /locus_tag="CRE_13299" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94345.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13299" /db_xref="WormBase:WBGene00061540" /translation="MEPIFPLLRLPENVIIEVIKNLAVDPLFDFSLISTKTKNIVASL GIEASDVRIIICRVVVVTVAGRYFSMDRTFYYDSVDRDALIHLDSNQLISAYSRGIYD RRTVRSSTPLFSFNNWLDHIKTVFCYNKPPNVVFSAGSRQFEMESLKNVIKSVNELVV NGYNTEFRNRELLEHFKNVNKLTLGRNLFEEACEVQKYFIQNFKSIRFCDDVSLDDML LVNSERVDFSCTISQKQFNQFLKHWIRGSNPRLQNMNLSTNLHDGKVYLKGIRCIEMS EELKKEIRQKHGIFDIDMVKIRRKEGTTAVIATVDYGPLLFVRFYVLY" gene complement(<582080..>587466) /locus_tag="CRE_13392" /db_xref="WormBase:WBGene00061538" mRNA complement(join(<582080..582452,585490..585767, 586984..>587466)) /locus_tag="CRE_13392" /product="hypothetical protein" /db_xref="WormBase:CRE13392" /db_xref="WormBase:WBGene00061538" CDS complement(join(582080..582452,585490..585767, 586984..587466)) /locus_tag="CRE_13392" /note="contains similarity to Pfam domain PF01457 Leishmanolysin; contains similarity to Interpro domain IPR001577 (Peptidase M8, leishmanolysin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94406.1" /db_xref="InterPro:IPR001577" /db_xref="PFAM:PF01457" /db_xref="WormBase:CRE13392" /db_xref="WormBase:WBGene00061538" /translation="MLYRIRNHSDMPIVNDEMMSIVRENCNLHTALATKALKKELKDE KFLPYTTTVPVKKEILPPKVIQDTPQPPKIAQTVSDSRNVGPMHNYRGFPDYRYVPYK APMKKRRVSQQTPKRGVKRKAEDDGPEEGRKRGKWDISSKSTKINYFQPKRENPTAPN PYQCTNGTLYVGSYNATDMYPCYAENQKVHIKKVVDGWLREGSLICPKCSDYCNNCGP SIVIPDYIGDSELDEPCSAFSRFSIFGLLLFYLVFLFRNSQIDVIAMEAFHYLTNIDY IYFHKTKIGRIERKAFSKMYEIDHLYFKESIHIGMIESEAFSGSQIDELIMDGVTIES AHDTFLLNIDSENTIMKNCSVYLVPRKEENVIEFDDEQKIIEK" gap 589080..589089 /estimated_length=10 gene complement(<589628..>594216) /locus_tag="CRE_13393" /db_xref="WormBase:WBGene00061537" mRNA complement(join(<589628..589909,591096..591528, 592140..592229,592368..592465,592512..592773, 592938..593195,593363..593445,593609..593726, 593826..594091,594136..>594216)) /locus_tag="CRE_13393" /product="hypothetical protein" /db_xref="WormBase:CRE13393" /db_xref="WormBase:WBGene00061537" CDS complement(join(589628..589909,591096..591528, 592140..592229,592368..592465,592512..592773, 592938..593195,593363..593445,593609..593726, 593826..594091,594136..594216)) /locus_tag="CRE_13393" /note="contains similarity to Pfam domain PF01457 Leishmanolysin; contains similarity to Interpro domain IPR001577 (Peptidase M8, leishmanolysin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94422.1" /db_xref="InterPro:IPR001577" /db_xref="PFAM:PF01457" /db_xref="WormBase:CRE13393" /db_xref="WormBase:WBGene00061537" /translation="MKPRLILHFFAYTFLLPFISSLPCSYQNPRIEDVLLEVPIEHRH AHRHRRSSETEAPPEVEKFAPLRIQLHYDKSIQNLTAEVQNFVNTTLLPEAVGYWENA LRVRPMKTPIRLRRKCISSFYYYKQGMRNVACDKGCREHTTCGEADIPTNHLLDCLAC NNTDDCQTSGEMGEGVKDSDFILYVTAHNSKRCEGPETLSYAAHCQQEADFDRPIAGN VNLCPNALSVHNHDYEILTSTVKHEILHALGFSVGLYAFFRDKDGKPRTKRNRYGRPT SLNKQKGYYDWDSNTITTVLREDWWTGEGKVIHPIHMMVTPKVREEARRHFGCDKLEG AELENQGGEGTYLTHWEKRAYENEAMTGTHTQNPVYSRLTLAFLEDTGWYQPNYEVAE DLYWGKELGCDFAMKSCGEWIHQKRILGEDAYPYCSDIKHDGTKSMAITRCTSQRDSL ALCNLIPFQKELPSQYRNFMSLPGVSPDGAKYYGGSVEMADYCPFLQEFEWKLLDKEQ HKDSRCELEGNGKGGEDILEVYGENSKCFEFPKPWTERKCGRIRVLSHYMAGCYEYQC TNGTLFVGSYNATDMYPCYAENQKVHIKKVVDGWLREGSLICPKCSDYCNNCGPPIVI PDYIGDAELDEPCSAFSRFSIFGLLIFYLVFL" gap 590422..590685 /estimated_length=264 gene 592823..592895 /locus_tag="CRE_31754" /db_xref="WormBase:WBGene00186162" tRNA 592823..592895 /locus_tag="CRE_31754" /product="tRNA-Asn" /db_xref="WormBase:CRE31754" /db_xref="WormBase:WBGene00186162" gene complement(593499..593582) /locus_tag="CRE_32134" /db_xref="WormBase:WBGene00186542" tRNA complement(join(593499..593535,593545..593582)) /locus_tag="CRE_32134" /product="tRNA-Tyr" /db_xref="WormBase:CRE32134" /db_xref="WormBase:WBGene00186542" gap 595241..595729 /estimated_length=489 gap 599259..599268 /estimated_length=10 gap 605938..605947 /estimated_length=10 gene <612462..>614217 /gene="Cre-tsp-3" /locus_tag="CRE_13300" /db_xref="WormBase:WBGene00061536" mRNA join(<612462..612521,612570..612707,612754..612855, 613799..613960,614011..>614217) /gene="Cre-tsp-3" /locus_tag="CRE_13300" /product="CRE-TSP-3 protein" /db_xref="WormBase:WBGene00061536" CDS join(612462..612521,612570..612707,612754..612855, 613799..613960,614011..614217) /gene="Cre-tsp-3" /locus_tag="CRE_13300" /note="contains similarity to Pfam domain PF00335 Tetraspanin family; contains similarity to Interpro domain IPR000301 (CD9/CD37/CD63 antigen)" /codon_start=1 /product="CRE-TSP-3 protein" /protein_id="EFO94354.1" /db_xref="InterPro:IPR000301" /db_xref="PFAM:PF00335" /db_xref="WormBase:CRE13300" /db_xref="WormBase:WBGene00061536" /translation="MSFCTFLARIFIFFLNLAQTLVGLTVIALTLWIRFDKSFESEIR TNILRDTDPEPLAGVKSDIRTGIIVAFWIIIGFSIANVIIGFVGVIGAVIRSKYLLAP YFLSMVVLFLLEIAVGITALVKRKSVRRTVKEYVFDSFNMNSQPDVSAFTFRYNCCGA DNLPNVECFAGQPTCSSAVWDRLDFTMMIFGIVMLIIVVLQALTALITVPIIVERKRE VSYQ" gene <615236..>616114 /locus_tag="CRE_13301" /db_xref="WormBase:WBGene00061535" mRNA <615236..>616114 /locus_tag="CRE_13301" /product="hypothetical protein" /db_xref="WormBase:CRE13301" /db_xref="WormBase:WBGene00061535" CDS 615236..616114 /locus_tag="CRE_13301" /note="coded for by the following C. remanei cDNAs: DR406202" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94432.1" /db_xref="WormBase:CRE13301" /db_xref="WormBase:WBGene00061535" /translation="MSEESTPSPSVDEAGPSEPAPRLVPQPPRENFPHSVPRRPDPID VDQLAAEIVDGATKQAVFIQQAVENAGVADRAPQPIIETPASSIIADRLAGDIVDDAA RQAVAINRVMDNAGVADRPPQPLGESSAAPIVEAPASAIIANQLAEDIVGDAPRQAVV IQRALDNAGVADRAPQPIVEPSAAPTVVTTAASIMDARISKAVVAGAERQAAIINHIL ENAGVADRPPQPLDEPSTAPIVDVPAGPVENVRDEEEEEEPQETVKPLARAASPGGKR GHSPDEPTTKRNRRND" gene complement(<616243..>618046) /locus_tag="CRE_13394" /db_xref="WormBase:WBGene00081203" mRNA complement(join(<616243..616605,617294..617522, 618015..>618046)) /locus_tag="CRE_13394" /product="hypothetical protein" /db_xref="WormBase:CRE13394" /db_xref="WormBase:WBGene00081203" CDS complement(join(616243..616605,617294..617522, 618015..618046)) /locus_tag="CRE_13394" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94405.1" /db_xref="WormBase:CRE13394" /db_xref="WormBase:WBGene00081203" /translation="MDMTIEEAPLRPPNILPNNETTVISSQPVPNQTDAITTFDKNLE CLSEVEKAKFLEHVQVMLKKEEKDKEKRELEKRRAHLKNESKEYQEEHEKKLRKCLGR YYSYVSRCKSLKGFRPDLTWIHPHEVEDELETYHLDEFDEFMKRLRKAERPITSLEAQ YFPGVITCYPEDITEFFEKRWKRIKKSFVSAKNNICNCFKRSTPINQ" gene complement(<619870..>621267) /locus_tag="CRE_13395" /db_xref="WormBase:WBGene00061534" mRNA complement(join(<619870..620245,621155..>621267)) /locus_tag="CRE_13395" /product="hypothetical protein" /db_xref="WormBase:CRE13395" /db_xref="WormBase:WBGene00061534" CDS complement(join(619870..620245,621155..621267)) /locus_tag="CRE_13395" /note="contains similarity to Interpro domain IPR002159 (CD36 antigen)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94346.1" /db_xref="InterPro:IPR002159" /db_xref="WormBase:CRE13395" /db_xref="WormBase:WBGene00061534" /translation="MRNVRERRERERERERERERERERERAKREREIERESVVNLKKM KSALIPVIILHETSEIDDDSLETIRSQLYETESIAYTSCNIMMIIGAIVLLLGFLFLA FSVSLVAEFRVSRPHYLQLGLFDSLLGRRPKRSDGLSPEPLPPYIPKGEPNGFHHNHA YM" gene <622422..>623472 /locus_tag="CRE_13302" /db_xref="WormBase:WBGene00061533" mRNA join(<622422..622486,622977..>623472) /locus_tag="CRE_13302" /product="hypothetical protein" /db_xref="WormBase:CRE13302" /db_xref="WormBase:WBGene00061533" CDS join(622422..622486,622977..623472) /locus_tag="CRE_13302" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94468.1" /db_xref="WormBase:CRE13302" /db_xref="WormBase:WBGene00061533" /translation="MANHLCRRLVRQQQGAVFNLHGDYPHCHPLYNEENKKVVGKFKG ELNGLIMQELVALKSKQYVYKIAQETRENFIEYYNRKHQEEMGKPKLPRTQKPGDESK KSKGIKKNVVKNELTVDDFKSCLFDKTIVRKTQYCIRSVKHPIFTQCQNKVVLNNESG DHKRYILKDSHSTMAFGNCHIKSGVL" gene complement(<625523..>632579) /gene="Cre-scav-2" /locus_tag="CRE_13396" /db_xref="WormBase:WBGene00061532" mRNA complement(join(<625523..625898,626501..626580, 626628..626936,627436..627885,629800..630102, 632094..632281,632570..>632579)) /gene="Cre-scav-2" /locus_tag="CRE_13396" /product="CRE-SCAV-2 protein" /db_xref="WormBase:WBGene00061532" CDS complement(join(625523..625898,626501..626580, 626628..626936,627436..627885,629800..630102, 632094..632281,632570..632579)) /gene="Cre-scav-2" /locus_tag="CRE_13396" /note="contains similarity to Pfam domain PF01130 CD36 family; contains similarity to Interpro domain IPR002159 (CD36 antigen)" /codon_start=1 /product="CRE-SCAV-2 protein" /protein_id="EFO94384.1" /db_xref="InterPro:IPR002159" /db_xref="PFAM:PF01130" /db_xref="WormBase:CRE13396" /db_xref="WormBase:WBGene00061532" /translation="MPSSSNASNGTSSSAPIASKFSSKRMTCCQLAISAILIGLGSFL LFGSLITHTVVVPNVVKSSIEDNSRLINGSILWKKWTVPDYRIRFNLFVYSMKNPDEF MNGAIPEVSGSGPYVFDKKLENRVVSAENGTVKYQRFLSYFFNEQESCQTCILGNRIW VPNMIYQKFVEAASTEGMKAAATTLLSQTAFLEVEVEELLFEGYKDPFLDKVCEIPFM NFVCEAILDVPERIGLFFEANNTASKMYEIDDGTRDPTNLGKILKYDEEPLLDETWWS TEESLKIRGTDGSLFHPFLSKNEKLYVYVAELCRSIWLEFKEEVEYRGLKAYRYVVPP EVFDVTYPGNEGYCNPSDKQFFSSQNDSVGCLPKGLLEISKCQKSQPPITISLPNFLY APSEVKESVKGLNGTDDIRDSIVVDIEPRVGAVLYARRVSQVNIEMWKGKNLTFPVNL KKMKSALIPVIILHETSEIDDDSLETIRSQLYETESIAYTSCNIMMIIGAIVLLLGFL FLAFSVSLVAEFRVPRPYYLQLGLFDSLLGRRPKRSDGLSPEPLPPYIPKGEPNGFHH NHAYM" gap 629470..629479 /estimated_length=10 gap 641676..642428 /estimated_length=753 gene <644165..>647956 /locus_tag="CRE_13303" /db_xref="WormBase:WBGene00061531" mRNA join(<644165..644823,645477..646300,646794..647010, 647440..>647956) /locus_tag="CRE_13303" /product="hypothetical protein" /db_xref="WormBase:CRE13303" /db_xref="WormBase:WBGene00061531" CDS join(644165..644823,645477..646300,646794..647010, 647440..647956) /locus_tag="CRE_13303" /note="contains similarity to Pfam domain PF00075 RNase H; contains similarity to Interpro domains IPR002156 (Ribonuclease H), IPR001878 (Zinc finger, CCHC-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94472.1" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR002156" /db_xref="PFAM:PF00075" /db_xref="WormBase:CRE13303" /db_xref="WormBase:WBGene00061531" /translation="MTDEGQVPATGSFSMELMRQFKDEFLEMIAPELLAMRKGEEKVP ELSQKGLQKQAEINVQVINMLNNGAADLGKAVEEVVDLLKRRNQELLLLDKDPSALKN VEKLRAIAAVTSSEGSNAGDAKLMALAQIMSQGGDNRNQRSGARRQWFPAAGFGGRQS GVRNFSAYSQRGGHGGERAFGTKRQFNGSSTSGDFPKRSQIQCFSCGEIGHYSTQCGR TSFWEEKLESGGMIRDMEEEFEPQCFLFTDASAEGLGAVLKNGSGQTVMRMSELGGTG FQNESSALRELRAVQMAVERMASWKRGAVLIHTDSQAAVIILRKGSMRRTLQIVAERV WESLRSIGQAKFIWIPREQNKEADEASRDFDYDDWAVQNWAFEWAQKRWGEVKCDWFA DEQNTKTELFFSRLPEPGTLGADVFEHVDKAGAIGLAWWVPPPALIPRLMRVARQKKL RGILATPLWIAHPSYQALVNERGEFIPEIRDSRIFKVNTKIISPEGEKLAFVKNMINS LGPGNLVKAIEFLARAALEGKAPSTARDYLKENAARRKWIQNNGLPLNETSTLIYLAS REQNKEADEASRDFDYDDWAVQNWAFEWAQKRWGEVKCDWFADEQNTKTELFFSRLPE PGTLGADVFEHVDKAGAIGLAWWVPPPALIPRLMRVARQKKLRGILATPLWKAHPSYQ ALVNERGEFIPEIRDSRIFKVNTKIISPGRGSQRGERMASEFCRSPFMLAIIDFSF" gap 647329..647338 /estimated_length=10 gene <648632..>649321 /locus_tag="CRE_13304" /db_xref="WormBase:WBGene00081201" mRNA <648632..>649321 /locus_tag="CRE_13304" /product="hypothetical protein" /db_xref="WormBase:CRE13304" /db_xref="WormBase:WBGene00081201" CDS 648632..649321 /locus_tag="CRE_13304" /note="contains similarity to Interpro domain IPR013762 (Integrase-like, catalytic core, phage)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94402.1" /db_xref="InterPro:IPR013762" /db_xref="WormBase:CRE13304" /db_xref="WormBase:WBGene00081201" /translation="MSNTEMSKVGSQLAADVIRATRRKEVQKRQQPKAVSWSELQVVA GTKSNDEKGERDTLILLLSHQALLRAEEAANLKWSDLTQTNGILEIRVRKAKHDQQAL GRSTFIPCPDGSDLDCRLKRWKVCESLRSRKSEYLFSNLNNGAGLSASAISSIVKKKL MEFGIDGTHHSLRRGAANDLQRQGLSEGGDQGAWEIGDLMLVSKGTWWIRRKRKEYQA ERRRRRMDHRC" gap 650861..650941 /estimated_length=81 gene complement(<652074..>653930) /locus_tag="CRE_13397" /db_xref="WormBase:WBGene00081214" mRNA complement(join(<652074..652379,652960..653548, 653851..>653930)) /locus_tag="CRE_13397" /product="hypothetical protein" /db_xref="WormBase:CRE13397" /db_xref="WormBase:WBGene00081214" CDS complement(join(652074..652379,652960..653548, 653851..653930)) /locus_tag="CRE_13397" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94454.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13397" /db_xref="WormBase:WBGene00081214" /translation="MEPTFPLLRLPENVIIEVIKNLAIDSLFDFSLISTKTKNIVASL GIEASGVRIIISRVVLVIVYGRYFSMNRSFYHGSVYQDALIHLDSNQLISAYSRSIYD RRTVRSSTPLFSFNNWLDHIKTVFCYNKPPNVEFSAGNRQFEMESLKNVIKSVNELVV NGYNTEFRNRELLEHFKNVNKLTLGRNLFGEACEVQKYLIQNFKSIRFCDDVSLDDML LVNSRRVDFSCTISQKQFNQFLKHWIRGSNPRLQYMNLSTNLVDGKVYLKGIRCIEMS EELKKEIRQKYESSDIEMVQIRRKEGTTAVIATKHLGPFLCVRFYVLY" gene complement(<654274..>654912) /locus_tag="CRE_13398" /db_xref="WormBase:WBGene00081218" mRNA complement(join(<654274..654721,654851..>654912)) /locus_tag="CRE_13398" /product="hypothetical protein" /db_xref="WormBase:CRE13398" /db_xref="WormBase:WBGene00081218" CDS complement(join(654274..654721,654851..654912)) /locus_tag="CRE_13398" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94471.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13398" /db_xref="WormBase:WBGene00081218" /translation="MFLTREPQGVASLESFQIATRNESLGRNPFEEACKVQRLFIQNY KSIAFHDVFSLDDMLSFNIEHVHFTRPISQKQFNRFLKHWIRGSNPRLQRMFLSIDKN DLVNGEIHLKGIRCMEMSEEAKREIRRKHRLSVSVDMIQIRRKDGTTAVIGTNDSGNI LHVRFIVLH" gene complement(<655611..>658740) /locus_tag="CRE_13399" /db_xref="WormBase:WBGene00061530" mRNA complement(join(<655611..656043,657310..657425, 657473..657782,658613..>658740)) /locus_tag="CRE_13399" /product="hypothetical protein" /db_xref="WormBase:CRE13399" /db_xref="WormBase:WBGene00061530" CDS complement(join(655611..656043,657310..657425, 657473..657782,658613..658740)) /locus_tag="CRE_13399" /note="contains similarity to Pfam domain PF00125 Core histone H2A/H2B/H3/H4; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core); coded for by the following C. remanei cDNAs: DR779892" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94502.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CRE13399" /db_xref="WormBase:WBGene00061530" /translation="MNRMEHNPYLIKNENVAPSRSSSIPSYYNRNSEMNQIREEIEAI TSRKNFNRDSDSMQEVIDIMTRQINKWEQLEDDYGPDATRQRYIEAFQRKRDSWEKKK EQAERAFYERRDRMKREMEYDNGYSRNQIRRERRMDDDSDSDVMEDDRRQPLGNLDYS RKDNCVRGREAKPMALLNRDRSRSRSPLLLPRQAHPSTSLQLRRPNIPSTPPVRVRPG KSRVTKSKNRKWRPGQKALLEIRKYQKSTDMLIQKAPFARLVQEILRETTNESHDYRI RADALMALQEGAEAFMVEMFEGSVLISNHAKRVTLMPTDVQLYRRLCLRNLS" gene <661835..>665924 /locus_tag="CRE_13305" /db_xref="WormBase:WBGene00061529" mRNA join(<661835..661900,662482..662530,662583..662656, 662790..663009,664347..664777,665913..>665924) /locus_tag="CRE_13305" /product="hypothetical protein" /db_xref="WormBase:CRE13305" /db_xref="WormBase:WBGene00061529" CDS join(661835..661900,662482..662530,662583..662656, 662790..663009,664347..664777,665913..665924) /locus_tag="CRE_13305" /note="contains similarity to Mus musculus Uncharacterized protein C2orf25 homolog, mitochondrial precursor.; SW:Q99LS1" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94496.1" /db_xref="WormBase:CRE13305" /db_xref="WormBase:WBGene00061529" /translation="MLSAKGPQMRAFTQRIAAFSTQVHIDPAPIVFVGKGTTPRQNSL LGPNDSQYPFQGDVSFAHKPLSIRQQKENSKIERVMDHTEHSLINLLSNTNIEVDRTH LTQMREEAMNEIQANAADVEIELSAIEAPKLLKKEMKYLFPQMETQKMANVTVFNLTQ KSEFDMKAWSEAMEEEREKLTASFIMSANAICSTLHRFGYWADFIDPSSGRPYMGDYT NHTLFETNDAYKQMGFKIEDLGCCKVLQHACWGSNAFVGTIFTDAPVDGSAVRDILKK VTQEIDE" gene <666331..>668957 /locus_tag="CRE_13306" /db_xref="WormBase:WBGene00061528" mRNA join(<666331..666426,667047..667170,668728..>668957) /locus_tag="CRE_13306" /product="hypothetical protein" /db_xref="WormBase:CRE13306" /db_xref="WormBase:WBGene00061528" CDS join(666331..666426,667047..667170,668728..668957) /locus_tag="CRE_13306" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94371.1" /db_xref="WormBase:CRE13306" /db_xref="WormBase:WBGene00061528" /translation="MTSSSDDDEADVYRRRETTIPEIFVIYLQRWTKNLPTFTGQIVI LFCVLPVSFSLAVFLVTAIFNFGIAFIAQTISSVIILLFLIPCIAVCIVSAIATAYIL QLTQNIYLRLSSSPPTDHSSYTQNHRSISPPPEYHPKMEIEEKLKTC" gene <670104..>675219 /locus_tag="CRE_13307" /db_xref="WormBase:WBGene00061527" mRNA join(<670104..670183,671455..671742,674352..674960, 675009..>675219) /locus_tag="CRE_13307" /product="hypothetical protein" /db_xref="WormBase:CRE13307" /db_xref="WormBase:WBGene00061527" CDS join(670104..670183,671455..671742,674352..674960, 675009..675219) /locus_tag="CRE_13307" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94452.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13307" /db_xref="WormBase:WBGene00061527" /translation="MSSKFPLLKLPTLVFNTVVANFNVFELVSLALCSKSSKSQCKQY RSQTNLKKQIENFHVEFSTVCEVRIKFYPSLTSELMFYVEKLENEEEMSSYSQIFDNM YIPNGWRPRMNDIAHDDWFPFKQPFISEFSQFLYYSNDTLSAVSSWIAFLSDLFTSQP SLLCINFDCFQKGEIDRIMNLPFPIARFVMKHNNDGIEIDEELALSILKRQNATKGLK LEFKPSERFHFNFDTLRKAPDHLEIDHSHWVSWQQVIEMSSIDVAILRSNFSNSDFKS LVEKWKNGWTPKWKRIMIEFCETLDVDSYISDPIIDVTESGCGRRDLITRNIAIYAYK FQHEFSYGIGSILKNGYHLTREDRSIATITVENNKIGWFIIQNDTDPKFIVYSNKRTF GLN" gap 670696..670705 /estimated_length=10 gap 673646..673655 /estimated_length=10 gene complement(<679614..>681079) /locus_tag="CRE_13400" /db_xref="WormBase:WBGene00061526" mRNA complement(join(<679614..679783,679836..680039, 680890..680992,681050..>681079)) /locus_tag="CRE_13400" /product="hypothetical protein" /db_xref="WormBase:CRE13400" /db_xref="WormBase:WBGene00061526" CDS complement(join(679614..679783,679836..680039, 680890..680992,681050..681079)) /locus_tag="CRE_13400" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94372.1" /db_xref="WormBase:CRE13400" /db_xref="WormBase:WBGene00061526" /translation="MFDDPTLFTNTILRDLLAALGVHCVLIDSVWWDRSNMEDQPSLL GCDKGSLQPSSPFLKDHVKIVTEMDLLKNETMSDWNAPRLRDDQVWYAAMDAVCLYYL NVGMRVQWRNDQPHCTLLLHSSAVHRHCLPSTVPLHQHFPLSFTVSPFPILTYITYTL HSNKHLYH" gene <693022..>694364 /locus_tag="CRE_13308" /db_xref="WormBase:WBGene00081221" mRNA join(<693022..693101,693147..693416,693503..694096, 694148..>694364) /locus_tag="CRE_13308" /product="hypothetical protein" /db_xref="WormBase:CRE13308" /db_xref="WormBase:WBGene00081221" CDS join(693022..693101,693147..693416,693503..694096, 694148..694364) /locus_tag="CRE_13308" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94484.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13308" /db_xref="WormBase:WBGene00081221" /translation="MSSEFPLFRLPLIVLNHGLKLMTPFEILSLSLCSKRCNTVCQSL RNQLKCKEKAVKFQLKCSKKREIQLEFNYYPNTRWILSILQISENEEIGFSRNDLFVT NWIPTEEDTPLEQIREKNSMLNQYLKVYISRDYDDKFILRQYIDHLSYIFNITLTDLE LHFQDFTRDENETIIDLYCGNRRNTNCVKALTLIGESENTPEDEEVVDHILSRQEAKS DLTLDILSSTFDIRRSQFRYIPNQLVIRNPNWVSSIDLKYFNSFSVLIFQYNPLMWWW HVEYLIEMWYFGWTPKWTVMMIEFPFINIDDTINKIRRRIPLQKKLFAMRSEETIEGP DGLSDRIKYSIPREDGTIGEFLVENNKYLYIKMRDNTELSLSTFITKTKTMM" gene <695265..>696968 /locus_tag="CRE_13309" /db_xref="WormBase:WBGene00061524" mRNA join(<695265..695604,696100..696779,696882..>696968) /locus_tag="CRE_13309" /product="hypothetical protein" /db_xref="WormBase:CRE13309" /db_xref="WormBase:WBGene00061524" CDS join(695265..695604,696100..696779,696882..696968) /locus_tag="CRE_13309" /note="contains similarity to Pfam domains PF03951 (Glutamine synthetase, beta-Grasp domain), PF00120 (Glutamine synthetase, catalytic domain); contains similarity to Interpro domains IPR008147 (Glutamine synthetase, beta-Grasp), IPR014746 (Glutamine synthetase/guanido kinase, catalytic region), IPR008146 (Glutamine synthetase, catalytic region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94393.1" /db_xref="InterPro:IPR008146" /db_xref="InterPro:IPR008147" /db_xref="InterPro:IPR014746" /db_xref="PFAM:PF00120" /db_xref="PFAM:PF03951" /db_xref="WormBase:CRE13309" /db_xref="WormBase:WBGene00061524" /translation="MSHLNYETRLPLGQATIDHFMGLPAHPSKCQATYVWIDGTGEQL RAKTRTFDVKPKYVSEYPVWNYDGSSTGQAEGDNSDRYLRPVAVFPDPFSGGHNVLVM CDTLDNEMKPTVTNHRQACAAIMKQVADQHPWFGMEQEYLIVDRDEHPLGWPKHGYPA PQGKYYCGVGADRAFGREVVETHYRACLHAGINIFGANAEVTPGQWEYQIGTCEGIDM GDQLWISRYILHRVAEMFGVCISLDPKPKVTMGDWNGAGCHTNFSTSEMRKPNGLTAI FEAMKGLEKTHLEAMKVYDPNGGQDNLRRLTGRHETSQADKFSWGVANRACSIRIPRQ VADEAKGYLEDRRPSSNCDPYLVTAMIVKSVLLD" gene complement(<702613..>703671) /locus_tag="CRE_13401" /db_xref="WormBase:WBGene00061525" mRNA complement(join(<702613..702885,702935..703027, 703077..703216,703347..703437,703491..703563, 703610..>703671)) /locus_tag="CRE_13401" /product="hypothetical protein" /db_xref="WormBase:CRE13401" /db_xref="WormBase:WBGene00061525" CDS complement(join(702613..702885,702935..703027, 703077..703216,703347..703437,703491..703563, 703610..703671)) /locus_tag="CRE_13401" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94451.1" /db_xref="WormBase:CRE13401" /db_xref="WormBase:WBGene00061525" /translation="MSQRLLVYRLVELYRDQDDVNKEETLCFNLNTRGINQRGKAPYL EVDAQESFNYGLIFPTYDGTAAYCTLVINPIGIASHLESNCKIINDAVRAKDPVHRNN KPYQLMHLVDKLLNSYFSDYKNIIEQRLQKGGIVTKIREDFMISVRSQITFGTDKSLM RQTEQTAYDFRSEREAISNSTAAHKPTQHKETVSENVYNKLRRRRIEMVREDRMKSTD PRRLVIDVQVIYANLVPPPSLHQVN" gap 705209..705218 /estimated_length=10 gap 706599..706608 /estimated_length=10 gap 708703..708712 /estimated_length=10 gene <709602..>709830 /locus_tag="CRE_13310" /db_xref="WormBase:WBGene00081222" mRNA join(<709602..709737,709784..>709830) /locus_tag="CRE_13310" /product="hypothetical protein" /db_xref="WormBase:CRE13310" /db_xref="WormBase:WBGene00081222" CDS join(709602..709737,709784..709830) /locus_tag="CRE_13310" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94487.1" /db_xref="WormBase:CRE13310" /db_xref="WormBase:WBGene00081222" /translation="MQLFDESRSQRPPRGESKLKTPVEPPKMPDRDSVDRQTPDRQTE RVAIHSCQHTRRTVGL" gene <711301..>712246 /locus_tag="CRE_13311" /db_xref="WormBase:WBGene00081208" mRNA join(<711301..711347,711393..711480,711903..712028, 712080..712150,712198..>712246) /locus_tag="CRE_13311" /product="hypothetical protein" /db_xref="WormBase:CRE13311" /db_xref="WormBase:WBGene00081208" CDS join(711301..711347,711393..711480,711903..712028, 712080..712150,712198..712246) /locus_tag="CRE_13311" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94429.1" /db_xref="WormBase:CRE13311" /db_xref="WormBase:WBGene00081208" /translation="MIYIFRLRASDIFLEQLRELGHVKIGQNGEIEQFILGDLNIGKP TIASNPAATTTTVNAEEARPDTPYPESTTPRAGTPEPKALLAVIRQKELWGDEGRPPG NGTVDRTGQKQNQRCAHLLLLLHL" gene <713582..>716130 /locus_tag="CRE_13312" /db_xref="WormBase:WBGene00061523" mRNA join(<713582..713806,714251..714469,714519..714949, 715995..>716130) /locus_tag="CRE_13312" /product="hypothetical protein" /db_xref="WormBase:CRE13312" /db_xref="WormBase:WBGene00061523" CDS join(713582..713806,714251..714469,714519..714949, 715995..716130) /locus_tag="CRE_13312" /note="contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein; contains similarity to Interpro domains IPR002114 (Phosphotransferase system, HPr serine phosphorylation site), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94363.1" /db_xref="InterPro:IPR000609" /db_xref="InterPro:IPR002114" /db_xref="PFAM:PF02118" /db_xref="WormBase:CRE13312" /db_xref="WormBase:WBGene00061523" /translation="MADTNSANDALRNSASCDSGDSDASQYIKFCIQLAYILPFGYLY SSFLITIIRKKKDRELFGDSFFTLHLVDGIVSLLFLLLDISFYRLTSYIRPICEFFLP LLKDPAYYLTPYWSVYVYVQLAKMLSTLVMNINRYTSVSYPIQHKSIWMQHCFKSVLA IFLIPIIFTWPVAIARTSFLPLNGQSVIVYEHYFSWARTTYGRLLISTVTLVFIIFSS IVTSTKLRKMGKHMKHVEFSMTVATLFTSAGFIVLLIVQFFYLNTKLDTLTTWTWTRI LIVGGQQAGNDFYMLSGPVVLLILDKNIRKSTFQWKRGKIDSQTNAKVSVQSAQLVTI TN" gap 715112..715450 /estimated_length=339 gene complement(<716146..>718168) /locus_tag="CRE_13402" /db_xref="WormBase:WBGene00081197" mRNA complement(join(<716146..716397,716601..716706, 718113..>718168)) /locus_tag="CRE_13402" /product="hypothetical protein" /db_xref="WormBase:CRE13402" /db_xref="WormBase:WBGene00081197" CDS complement(join(716146..716397,716601..716706, 718113..718168)) /locus_tag="CRE_13402" /note="contains similarity to Interpro domain IPR002099 (DNA mismatch repair protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94377.1" /db_xref="InterPro:IPR002099" /db_xref="WormBase:CRE13402" /db_xref="WormBase:WBGene00081197" /translation="MALKVNVYHNLSYMKTHQRLHVTEIPSLVHHYVPQLEKLPFLIA SLILDVDYDDEQKCFESISRAIGDLFTIHTHFITAEKKVSEFSTMHWKPLIKQILMPL VKRKFIPPEHFKEREVIKQLADSHDLYKVFERCGS" gene complement(<719031..>726281) /gene="Cre-mlh-1" /locus_tag="CRE_13403" /db_xref="WormBase:WBGene00061522" mRNA complement(join(<719031..720328,720370..720392, 721556..722004,722756..723054,723212..723704, 724494..724602,725670..725838,725873..>726281)) /gene="Cre-mlh-1" /locus_tag="CRE_13403" /product="CRE-MLH-1 protein" /db_xref="WormBase:WBGene00061522" CDS complement(join(719031..720328,720370..720392, 721556..722004,722756..723054,723212..723704, 724494..724602,725670..725838,725873..726281)) /gene="Cre-mlh-1" /locus_tag="CRE_13403" /note="contains similarity to Pfam domains PF02518 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase), PF01119 (DNA mismatch repair protein, C-terminal domain); contains similarity to Interpro domains IPR002099 (DNA mismatch repair protein), IPR014762 (DNA mismatch repair, conserved site), IPR003594 (ATP-binding region, ATPase-like), IPR013507 (DNA mismatch repair protein, C-terminal), IPR014763 (DNA mismatch repair protein, N-terminal), IPR007087 (Zinc finger, C2H2-type), IPR014721 (Ribosomal protein S5 domain 2-type fold)" /codon_start=1 /product="CRE-MLH-1 protein" /protein_id="EFO94475.1" /db_xref="InterPro:IPR002099" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013507" /db_xref="InterPro:IPR014721" /db_xref="InterPro:IPR014762" /db_xref="InterPro:IPR014763" /db_xref="PFAM:PF01119" /db_xref="PFAM:PF02518" /db_xref="WormBase:CRE13403" /db_xref="WormBase:WBGene00061522" /translation="MGLIQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIM VNMQNGGLKLLQVSDNGKGIERDDFDLVCERFATSKLQKFEDLMHMKTYGFRGEALAS LSHVSKVNIVSKREDGKCAYQANYLGEKQRKSAQDGKMLAPTKPAAGKNGTCITATDL FYNLPTRRNKMTTHGEESKMVHDTILRFAIHRPDVSFALHQNQSSDFRTKGDGNFRNV VCTLLGRDLADTVLPLSLESTRLKFKFTGNVSKPITSATSKNSQNRKTSRSFFSVFIN GRSVRCDILKHPIDEVLQNRSLFCQFVALHLEIDETRIDVNVHPTKSSVIFLEKEEII EEIREYFEKFVSDIFGFEPRGNVKDEEEAEFSFSQVPIINIQSIKSIEAIKKPSVSNE KEFKPSPTSWKTEKKRVDHMEVRTDSKERKIDEFVVRCPGQKRPRRDSEDVFRDDVED VDERIQRNQEFNDEVSMVSVASTVDRRLNESQDLGEDEELECATTHREFQFESLETLR KQIVSNASLSLRELIRTSTFVGSIDPETVLIQFGTSLFQMNFSAVLREFFYQISIFSF GNYGSYRLDDEPPAVIEMLELIGELSKTDENYKDFGVFCDEGARIEAEILLGQHSELL HDYFAIKMEWIGEKSDERRKETLSPNRAADRAASEFKRKLRNWLASGSNTETPEQLFS ALTEGRFPKAMSSYLCTIDYLTVKEGKSDIKGIQNLYDFRFDMKNSKMTARKFGKIGE GSVHDTKKFMAGTGEMKIEKSGGYHNSDQETFWKSSKCTKKCSEEDIEVQERAEEVNP FEETDVNVEEPVPTPIETAVFECPEEGCTALFTKYGNLERHLALDKHNFVPEKETLLG FAMNRYAENIEGLRQTPIPSSLKDALTKIPPGTLPFDNLQGWALPHKKTNKRYNRDVV QFVKEKFEEAAKKKLKFYPKLIATEIREQKKDGKLQFPPDTWLNYKQIQNLYNTFGRK SRDLSAKKKETVATSTQIPATLPSSIRTPANRETATAAAHDSKSSSNKMELRKRPTRE TTDELIELVLQDLNSREFDDSEDVYDENSEENEDYNNLLIEIEKQKKEIFEN" gene complement(<727125..>731768) /gene="Cre-pod-1" /locus_tag="CRE_13404" /db_xref="WormBase:WBGene00061521" mRNA complement(join(<727125..727217,727641..728146, 728192..728424,728479..730439,730490..730953, 731009..731186,731706..>731768)) /gene="Cre-pod-1" /locus_tag="CRE_13404" /product="CRE-POD-1 protein" /db_xref="WormBase:WBGene00061521" CDS complement(join(727125..727217,727641..728146, 728192..728424,728479..730439,730490..730953, 731009..731186,731706..731768)) /gene="Cre-pod-1" /locus_tag="CRE_13404" /note="contains similarity to Pfam domains PF08954 (Domain of unknown function (DUF1900)) (2), PF00400 (WD domain, G-beta repeat) (2)contains similarity to Interpro domains IPR015049 (Region of unknown function DUF1900), IPR001680 (WD40 repeat), IPR015505 (Coronin), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DR408181" /codon_start=1 /product="CRE-POD-1 protein" /protein_id="EFO94400.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015049" /db_xref="InterPro:IPR015505" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="PFAM:PF08954" /db_xref="WormBase:CRE13404" /db_xref="WormBase:WBGene00061521" /translation="MAWRFTASKFKNTTPKIPKKEDTIFDVPVGNLSCTNDGIHASAD FLAFHIEGEGGKLGVLPIGAKGRRTRNDIWIIAAHGEQVSDFGFMTYADQLLATCSRD EPVKIWKLSRDSSPQLATEVDVGAGVITECLRAHSTADNILAVGSHNSAYITDISTKR VAIELSGITDKVQSMDWSEDGRLLAVSGDKGRQIVVYDPRASTEPIQTLEGHGGMGRE ARVLFAGNRLISTGFTTKRIQEVRAYDTGKWGAPIHTQEFVSTTGVLIPHYDPDTRLV FLSGKGTNKLFMLELQDRQPYLSHVFELTLPEQTLGATVGAKRRVHVMDGEVDTYYQL TKNSIVPTPCIVPRRSYRDFHTDLFPDTRGAEPGCNGNEWLSGTNAMPPKMSLGPSTT SSSPPPPEPMPPVQQAVAPPRPMSMSSASNVIPNGKSTNAPAVAAARKEEVRELDYGV VEKENGSSAAARSNGIVKSTTAHTPSAETNSTQGDSSPISSISPDPITVVSAVAHSAP RVTPASPVTGSVSTPNVVGPAFGEKPKETAPVNFRKPIGASNRVPLSQRVRPKSCVVG QITSKFRHVDGQQGTKSGQVFSNLRNVNTRLPPESNGVCCSNKYAAVPLAGLGVVGIY DVDAPGKLPDGVMDGIYNKSTITDLQWNPFDESQLAVGTDCGQINLWRFSESDGPRNE MEPEKTIKIGGEKITSLRWHPLAANLMAVALSNSTIELWDVDEGRLYSRFVNHTGGIL SIAWSAGGQRIASVGKDAKLFVHEPATAEHRVYERNAVVESTRAARVLFACDDRIVIV VGMTKSSQRQVQMYDATTTDLRHIYTQVIDSATQPLVPHYDYDSNVLFLSGKGDRFVN MFEVIYDSPYLLPLAPFMSPVGSQGIAFHHKIKCNVMAVEFQVCWRLSDKNLEQIVFR VPRIKKDVFQDDLFPDALVTWEPLTTAAKWMTGQETPLPVFRSLKPDGISSSIPRPIA AAIRHSDMPTSSATPSSSSGVTPTTSSSSGAQHHHHSHHHHHPTSTSSSSSSHPTPIA RNMQSCAVESAHTPDRQQVRERNHHDEWSTEEEEEAETGDSEYFTDENQSSQDHQFLV DLSDEGAESRVLKEEPKEEAEPRVRIPACLLTPKDNGEEDEDDEDYDVAASWSTKIDM DTRLEQDQMEGVDETEWNQ" gene <737635..>751241 /locus_tag="CRE_13313" /db_xref="WormBase:WBGene00061539" mRNA join(<737635..737750,743394..743481,744023..744089, 744139..744209,750861..>751241) /locus_tag="CRE_13313" /product="hypothetical protein" /db_xref="WormBase:CRE13313" /db_xref="WormBase:WBGene00061539" CDS join(737635..737750,743394..743481,744023..744089, 744139..744209,750861..751241) /locus_tag="CRE_13313" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94488.1" /db_xref="WormBase:CRE13313" /db_xref="WormBase:WBGene00061539" /translation="MTSQLLLLLLLFCVHLQSTISLTTCPRQCICHEHSIACSCETSE KSELIISSLGSTYITSLVVHTCDKVTVLNGSFSGVVLVERLSFIAIGRLYFEPHAFKD ILQSPRQLVIDEFFRFRNSQIDVIAMEAFHYLTNIDYIYFHKTKIGRIERKAFSKMYQ IDHLYFKESIHIGMIESEAFSGSQIDELIMDGVTIESSHDTFLLNIDSENTIMKNCSI YLVPRKEENVIEFDDEQKIIEK" gap 739421..739430 /estimated_length=10 gap 746422..746431 /estimated_length=10 gap 747052..747061 /estimated_length=10 gap 748812..748821 /estimated_length=10 gene complement(<751897..>753241) /locus_tag="CRE_13405" /db_xref="WormBase:WBGene00061518" mRNA complement(join(<751897..752785,753162..>753241)) /locus_tag="CRE_13405" /product="hypothetical protein" /db_xref="WormBase:CRE13405" /db_xref="WormBase:WBGene00061518" CDS complement(join(751897..752785,753162..753241)) /locus_tag="CRE_13405" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94480.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13405" /db_xref="WormBase:WBGene00061518" /translation="MEPIFPLFRLPENVILEVIKNFGMNKLFEFSLISTKTKNIVASS GITAHAVRITISRDVDVTVYYGPCIVRLSFYNDSVDALIHLDSNQPISAHFFYERRTV RPSTPFSFNNWLDQIKTVFCYNEPPTVVFWTGNERFEMESLKNVIKSVNQLYVCEDNI EFRSREILEHFKNANKLILDRNPFEEACEVQKFFIQNFISIGFHEDVSLDDMLLVNSK RVEFSRPISEKQFIRFLKHWIRGSNPRLQYMNLFIDTTNLDNGKVYLKGIRCIEMSEE SKKEIRQKHGISDIEMVKIRREEGTTAVIATVDYGTFLYVRFYVLY" gene complement(<754081..>755101) /locus_tag="CRE_13406" /db_xref="WormBase:WBGene00081199" mRNA complement(join(<754081..754873,755088..>755101)) /locus_tag="CRE_13406" /product="hypothetical protein" /db_xref="WormBase:CRE13406" /db_xref="WormBase:WBGene00081199" CDS complement(join(754081..754873,755088..755101)) /locus_tag="CRE_13406" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94389.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13406" /db_xref="WormBase:WBGene00081199" /translation="MSSSKFEFSLISTKTKNIAASLGMTAQSVRIAISRIVGVTVYGR YFNMSLMFYNDSVDRNALIHLDSNQPISAYLPYERRTVRPSTPFSFNNWLDHKAVFCY NKPPNVDFSEGSRQFEMESLKNVIKNVNQLVVSGENTEFRSRELLEHFKNANELTLGW NLFGEACEVQKFFIQNCNNLIFRDDVSLDDMLLVNSKSVELYRSISEKQFIQFLKHWI RGSNPRLQYMNLFIDTTDLVDGKVYLNGINWIETSEESKKEIRQKHGIDD" gene complement(<755639..>756554) /locus_tag="CRE_13407" /db_xref="WormBase:WBGene00061517" mRNA complement(join(<755639..756401,756475..>756554)) /locus_tag="CRE_13407" /product="hypothetical protein" /db_xref="WormBase:CRE13407" /db_xref="WormBase:WBGene00061517" CDS complement(join(755639..756401,756475..756554)) /locus_tag="CRE_13407" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94376.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13407" /db_xref="WormBase:WBGene00061517" /translation="MEPIFPLLRLPENVILKVIKNWSMVPLLEFSLISSKTKNIAASL GIEADDVCITISRVVDVTVYCRYFAMSLTFYNDSVDQDALIHLDSNQPISAYSVYERR TVRSSTPFSFNNWLDHIKTVFCYSKPPRLFFFPGNEQFEMKSLKNVIKSVNQLYVSGE NTEFRGREFLEHFKNPNELTLGRNLFGEACEVQKYLIRNYRSIRFEDDVSLDDMLLVN SERVDFSCTISQKQFNQFLKHWIRGSNPRLQYMNLSIDTTDLVNGIVYLKGIRCIEMS EDIR" gene complement(<757032..>757952) /locus_tag="CRE_13408" /db_xref="WormBase:WBGene00081219" mRNA complement(join(<757032..757047,757182..757552, 757629..>757952)) /locus_tag="CRE_13408" /product="hypothetical protein" /db_xref="WormBase:CRE13408" /db_xref="WormBase:WBGene00081219" CDS complement(join(757032..757047,757182..757552, 757629..757952)) /locus_tag="CRE_13408" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94474.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13408" /db_xref="WormBase:WBGene00081219" /translation="MFCIRISRVVDVTVYGRYFNMSLMFYSDSVNQDALIHLDSNQPI SAYFSLEIRTVRSSTPLYSFNNWLDQIKTVFCYNKPPTVVFWTGDERFEMESLKNAIK SVNQLYKGIQLKKLVKFIFRDDVSLDDMLSVNIESVIFSRSISEKQFIRFLKHWIRGS NPRLQYMKIPIDPTDLVNGKVYLNGINWIEISEESKEEIRQRHGISDIDMVQIRQGTL SPHPCNGHAHFLQYLASI" gene <758405..>760663 /locus_tag="CRE_13314" /db_xref="WormBase:WBGene00061516" mRNA join(<758405..758482,758536..759000,759590..>760663) /locus_tag="CRE_13314" /product="hypothetical protein" /db_xref="WormBase:CRE13314" /db_xref="WormBase:WBGene00061516" CDS join(758405..758482,758536..759000,759590..760663) /locus_tag="CRE_13314" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94478.1" /db_xref="WormBase:CRE13314" /db_xref="WormBase:WBGene00061516" /translation="MSPYKLGCNVLEITSSNIQRIGPVCKDIDTPVFRPETAITSSLN SIIFSNCSIGSLDSFSFTNYTLSVLSFNHSTITSIKPRAIEKSRIKSLGFGESKIEIF NGSSINKSEIKAVDFDGMEIEMIESDWIHNSTIEKLGIRNSKIENIEKNVFKDSVFDE IEMDGNRIMMMESEAFYGDSQISTLSITGNDLTTSTPSPSLLSSTSPSSHPTSFILAN NTIDCSPSDCSTNSFLLNSPKHSPLLYQISNNRCRPPSQSPCVDPRSISIEEHGITCR ISSLLADCACTASTSSLPSRFPIDSNISIVILGDCEHLTLDQKSAKFSQIYIFRTSKL VVMELPAALKVLKIFHSTVSMVRGETHDPQSLQSWEISNSKIDLISPSGLSHLKISTL FLHFSRLPHIPIHATRFSRIENLIIDSCFLESTQPLFEISSTLKMQHSVIFSSPRGLG TISSAQLQNNTLLECCRHPYFDYRNPIGLDTIDLDPRCDLHFYGSRCFSLDLAENNEG LETNHLPITSFVTFHSLTFYVYFAIFFWVF" gap 761145..761154 /estimated_length=10 gene <765775..>769532 /locus_tag="CRE_13315" /db_xref="WormBase:WBGene00061514" mRNA join(<765775..765891,766398..766575,766622..766771, 766815..767479,767552..767932,767982..768179, 768225..768305,768356..768445,768498..>769532) /locus_tag="CRE_13315" /product="hypothetical protein" /db_xref="WormBase:CRE13315" /db_xref="WormBase:WBGene00061514" CDS join(765775..765891,766398..766575,766622..766771, 766815..767479,767552..767932,767982..768179, 768225..768305,768356..768445,768498..769532) /locus_tag="CRE_13315" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94479.1" /db_xref="WormBase:CRE13315" /db_xref="WormBase:WBGene00061514" /translation="MNSSDEKPQLYDPRPRSEIMSSNNYEVPQIVKPAVAVSPIRDKE LTRGGRQVKCSIRGCNRRVELMEFPFFSDSDEDENNSLSTRGSQLTQWPTATKEAAAE NIKASQQVTINKDRVEKLLHNIDISTARMAVALERSADQKEEQRGQGKSRRCPYCGSQ LLGEPLYDHGIFECPFGKLPEPDRFRFLAINLVSYCQQCNSRSATHTGCRPVNCLVCR SPDHSLASGICLDPELRELTADQLRDRANHHRRDYLRHIRGLLASPNNPLQYRLPSDS PYISLYRREVPAGEERRGLQILRVENNEFPGTRLAEYRGAPGSLIREFITLRPPEFDN WNQLMIPIFDEDSARYLEEIARVVTRIREDPNSARTIELPAAPHANQNGVRQQRQNPV LPAEPRARPVNNRPVDVPNANQAIRREQPLVETPILRADPPGLRAPPTVPPYVPAGTT NQAKASAAKNRASTNYMRRPPPRPLTEDPGSQPCSSSQIAPATAESASSSAQAASSST INIDNMFNPETYASMGPWSNEMERRSTVPLRTNFASVPAGIESQEAHSQDNTLIEASQ IQPSNNMQMIQPMSHHSSNSAHNEGSESQSRGNSRESAVGRPSSQNSWRTASPQDQLE ANLEREIQANAIFHCHEHLRVDGTPMRPAFQHRAFKTILDLAPVERTAAQIIRIQTLQ FIITAQKDERMEVYHYQNPRLIKDYLDMLIRLGEALSTTDIMVVKLEKRHKTNIIQKR RAGTDIFPVPSFDLWTHTHVANAMEFILGTGEVGVVERIYNFNAREPRLWFELDHPID IDLPAELQRAREQQILQTVRPTERYHPRTLAQLEATSRLPIPLDIGAIHIQIEWMTLY LSGTSLVDQNHVPEYKIMAYAEMLRAILELLIYLRQEFHFDPAVRFIDCGEELGVMAA RGHNIVAPTLRLFAYRDVVQVKAYLQIVWSSLIEAHQDKPEECECITTPE" gap 770389..770398 /estimated_length=10 gene <770918..>774050 /locus_tag="CRE_13316" /db_xref="WormBase:WBGene00073305" mRNA join(<770918..772024,772097..772477,772527..772724, 772770..772850,772901..772990,773043..>774050) /locus_tag="CRE_13316" /product="hypothetical protein" /db_xref="WormBase:CRE13316" /db_xref="WormBase:WBGene00073305" CDS join(770918..772024,772097..772477,772527..772724, 772770..772850,772901..772990,773043..774050) /locus_tag="CRE_13316" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94460.1" /db_xref="WormBase:CRE13316" /db_xref="WormBase:WBGene00073305" /translation="MNLSSVQMAQNQPNHRLAHVSRDEERARPPEIRGPPRQSPTRHR PPHRNDIQEQQVTYEQFFHRDTPFDWDTVQGFADMEANWPIPWLPQSPFDGASLRLYV WRGSRPTPADHWEQTVARMPFLAEQEEIKNFALKFARATYECTRGGKSRRCPYCGSQL LGEPLYDHGIFECPFGKLPEPDRFRFLAINLVSYCQQCNSRSATHTGCRPVNCLVCRS PDHSLASGICLDPELRELTADQLRDRANHHRRDYLRHIRGLLASPNNPLQYRLPSDSP YISLYRREVPAGEERRGLQILRVENNEFPGTRLAEYRGAPGSLIREFITLRPPEFDNW NQLMIPIFDEDSARYLEEIARVVTRIREDPNSARTFELPAAPHANQNGVRQQRQNPVL PAEPRARPVNNRPVDVPNANQAIRREQPLVETPILRADPPGLRAPPTVPPYVPAGTTN QAKASAAKNRAPTNYMRRPPPRPLTEDPGSQPCSSSQIAPATAESASSSAQAASSSTI NIDNMFNPETYASMGPWSNEMERRSTVPQRTNFASVPAGIESQEAHSQDNTLIEASQI QPANNMQMIQPMSHHSSNSAHNEGTESQSRGNSRESAVGRPSSQNSWRTASPQDQLEA NLEREIQANAIFHCHEHLRVDGTPMRPAFQHRAFKTILDLAPVERTAAQIIRIQTLQF IITAQKDERMEVYHYQNPRLIKDYLDMLIRLGEALSTTDIMVVKLEKRHKTNIIQKRR AGTDIFPVPSFDLWTHTHVANAMEFILGTGEVGVVERIYNFNAREPRLWFELDHPIDI DLPAELQRAREQQILQTVRPTERYHPRTLAQLEATSRLPIPLDISAIHIQIEWMTLYL SGTSLVDQNHVPEYKIMACAEMLRAILELLIYLRQEFHFDPAVRFIDCGEELGVMAAR GHNIVAPTLRLFAYRDVVQVKAYLQIVWSSLIEAHQDKPE" gene <775060..>777897 /locus_tag="CRE_13317" /db_xref="WormBase:WBGene00073304" mRNA <775060..>777897 /locus_tag="CRE_13317" /product="hypothetical protein" /db_xref="WormBase:CRE13317" /db_xref="WormBase:WBGene00073304" CDS 775060..777897 /locus_tag="CRE_13317" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94381.1" /db_xref="WormBase:CRE13317" /db_xref="WormBase:WBGene00073304" /translation="MIYKSNPNSRLPSSQVAPPPRLTPLILINIIFSYSYLNSLVSDK SPRMLSRLSRRTSRSPVDRKERSLPVEREQTRGKLRSKSQPKSVMTSIVGPTKSAITK TVTKAKALKTDAEAAVQFLEDPTNKYPEDISQETIQAATSLVLNMKTVVARIEGFDAF IYNQFQKSAMKKLPERETLLRDVTDALRASGADGLHKQLTAHIAEMEQILTAFGTPMS SLQPPNQPQDPQSCEAITEMENYIYEANHSLETIHLGDELPHSLDSRDESASSSHPIT SSQDRELSMMYSDSAFPDRTREIQQRLLAENRRLKEENAQHIRAQYEEEKRRYAANMQ DLQYRESLAAELAKAQAKEDNWISRLNQHVEARQAQENANQESAGAITTSSPLPPFEP PTVRTITDPVVESFEPVTDNRVVPSPAQSQSNPAAIIVPQEEYVQETPILRTAHQIYQ QNIEPRTAESLHSTRNPVLNDLMNVLSNIAQNQRATERNILQQTTHMVQDMEQRLGAQ IHERAESLRSRATSRRSRARSPARSESSYARRYERGDPSDSEDESIQPTPTRNAPTHR IRSRSPTPIPRNRGLKLEVKLKLLQKFDGSNDLDHFQTLFTKFVLEDTDLNPEAKHAV LMNHITGPAAKCVSHARDPSVAIMMTFSALNKVYGKVNNKHNLLRKLQSLPFHQTDPD AMRLDAASLTNVLQQLKDKGVPADDHMTMWAIACKLPENMQKSLAKYTVKMGEGLTHD LILDRISRDIETMAMEQTYVSQRSPPANELTGSYATVNFANATPSRQKSAVQSKGNNP SGTRKPVYDPKLLESEYIDPITKAKLEGIYAPGPKGVNLRVIYRTFPFHEKEETKCKV CRGDHHEIRCTLSSKAFRDMCKTKGLCAICTRKHDITACGSTYRCGYCNGAHHLGGCP QKEFYRDMKNYPKDAPEVATFFRAPHPNKSK" gene <778475..>782816 /locus_tag="CRE_13318" /db_xref="WormBase:WBGene00061512" mRNA join(<778475..778887,778988..>782816) /locus_tag="CRE_13318" /product="hypothetical protein" /db_xref="WormBase:CRE13318" /db_xref="WormBase:WBGene00061512" CDS join(778475..778887,778988..782816) /locus_tag="CRE_13318" /note="contains similarity to Pfam domains PF05380 (Pao retrotransposon peptidase), PF00665 (Integrase core domain); contains similarity to Interpro domains IPR001584 (Integrase, catalytic core), IPR008042 (Retrotransposon, Pao)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94461.1" /db_xref="InterPro:IPR001584" /db_xref="InterPro:IPR008042" /db_xref="PFAM:PF00665" /db_xref="PFAM:PF05380" /db_xref="WormBase:CRE13318" /db_xref="WormBase:WBGene00061512" /translation="MIVGSPTLPKTQYRAPILSHEDARFLQRQNIDMSAAINSGDYNV HNIHMIIGNDILSYITAQPNYCKYILPSGRALERTILGNIVHPIPKLALWNKAVDPPL SDEYQIAMNVANTLLSSCEPEDAMTKLTLQIAEMYSLVITLKKGVDLLSKYDTIITGQ ESAGFIEKVTAEMLKAEGPKYTIPHRGVVKEDSLTTKLRIVLDASSHARGELSLNDCL HAGTNMITPIFGILIRMRCPRFIIVADIEKAFHQVRLQPEFRNVTMFLWLKDITAPVS AENIEVYRFRRIPFGMSSSPFLLAAYITYNLDINPHELNEEIKDNLYVDNALFCTNDR SEIATKIKGTKFIFKRMDMNLREYIVNDPDTMESLPESEKAQATTIKLLGYKWNSTED TLTVKIAVLDIDHPTKRDVASKLAETFDPLGLVSPIMVPFKRLMQRIWENGKSVNWKD RIPKELLPDWRALRNTFIDRELTVPRQLTSNYDYSEVHLLMFSDASQDMYAACCYACY IVKGETPVVTLLTSKNKIRPSKHESWTIPKLELLAIQLASNLACAIVAELRITINSIK LFTDSSCSIYWVLSENNPRQWVANRKTTINDNMKKMEECGIPTTIHHCPTKQNPADYA TRGMSTREVQNSKMWFEGPSFLKADPSTWPCMIAGKVTCPAEFRELVYSEIIDPDTKK KRKPLMEKKVAKPAENVQRSAVEQKTDDTVMILNSQTTRPGSFIPYTATNSLQKLTKI VVLILKTFSIIKNKSWESPVMTQFLSSDCPLHQAKVARLLIITEHYKDCDYLDYSFPS DIEHFTDTYGVRRVHRRITSPVLPQEASEPILIHPRHPLAKLIARETHEINGHMPEVY TTSAIKTRYWIPKLGGILKNVIRGCVKCQKVNNFPFDYPYTKDLPLCRTTPSKPFSKV GLDYLGPIMYRGDDGQTNKKAYVLVYTCLITRGAVLRVVPDGTSQRYILTLKMIFREV GVPNVIFSDNASTFKLGGSMINKDIEDSVYSHSLVSFLASEVIDFKYITPLAPWQGGI YERIVKLVKHQLIKECGIRTYDFYDLQYIVSGAQAMVNNRPLIPHSRSPRDMIALRPM DFIAPGVMTEIPADSDKSDALPRSTEATVRAHINKMEAATDRLWETWSNGYLLHLREN MHTKKRSSLLRPAVGQLVIIVTKLLKRHKWPLGLIVHVERSKRDGQIRSAIVKCRGKL YSRAVSQLIPLELNPLNRPNIATEEETEDTQDSSPRELPAPAVLFDPNMKYAPELFPS KDLPNIAECENKNPDHKINESNIINLPLNLNTDHLENNVVSGDTDDDFDIIEKRLGTA DTYQDPQRVLPAEAADDDFSELPAGRVRTYLSRKAKELPINYVHHAASQETAGTLPPG MLSTISLKTHLSTTERLNDEPHMVFPAKLGSSSPY" gene <787277..>796102 /gene="Cre-acs-5" /locus_tag="CRE_13319" /db_xref="WormBase:WBGene00061511" mRNA join(<787277..787414,787611..787724,788438..788573, 789486..789754,790334..790609,791804..791995, 792046..792438,794263..794700,795959..>796102) /gene="Cre-acs-5" /locus_tag="CRE_13319" /product="CRE-ACS-5 protein" /db_xref="WormBase:WBGene00061511" CDS join(787277..787414,787611..787724,788438..788573, 789486..789754,790334..790609,791804..791995, 792046..792438,794263..794700,795959..796102) /gene="Cre-acs-5" /locus_tag="CRE_13319" /note="contains similarity to Pfam domain PF00501 AMP-binding enzyme; contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)" /codon_start=1 /product="CRE-ACS-5 protein" /protein_id="EFO94353.1" /db_xref="InterPro:IPR000873" /db_xref="PFAM:PF00501" /db_xref="WormBase:CRE13319" /db_xref="WormBase:WBGene00061511" /translation="MTNETALTLAAAVIGSTYFLYCKLLKTAKLSLPNGLSVDRQAVE VKGQPGVWKSALMENEQEDVLTRFYPEVATIHDVFLKGKEESKGGPCVGTRSSGTSDY EFLSYDEVHEKAKKLSMTLVHEFGLTPGNTTNIGIYARNSPQWLISALACIEQSMVVV PLYDTLGAEAATFIVSQAEISVVIVDSYKKAECLVQNRHNMPSLKSVIVIDSAELLNG PLLFVFSKLLISFQTTIDSIRIESFDSALSLGAQYEYTNNLPKPEDNYIICYTSGTTG TPKGVMLTHSNIVANISGFLKILFAFQPSMIDTTQVHISYLPLSHMMEQLTHWTLLGF GSKIGYFRGSIQGLTDDIKSLKPTVFPVVPRLLNRLYDAITSKVQQQGFMAKLVYNFA FARKLSQVKAGKGGRDTIWDRLVFRKIQEQIGGKVDLMVTGSAPISSTVLETCRVTLG ATIVEGYGQTECTALATFTWMGDPSTGHCGAPAPCALVKLGDVPDLNYFAKDGKGEIR IKGPCVTKGYYKDPERTAELFDEDGFLQTGDIGEMLPNGCIRIIDRKKHIFKLAQGEY VAPEKIEQVYIRTPVAQQVYVDGDSLERWLIAVVVPEPDVMMEWNEKQGAGQRSLEEI CRDEKAKEFVLSELHAIGKANKLNSIEQVKKVILSTDPFTVENGLLTPTLKAKRPQLR LKYKDGMAKVYKQFPNL" gene <798163..>801807 /locus_tag="CRE_13320" /db_xref="WormBase:WBGene00061510" mRNA join(<798163..798172,798240..798408,800173..800626, 801443..801679,801730..>801807) /locus_tag="CRE_13320" /product="hypothetical protein" /db_xref="WormBase:CRE13320" /db_xref="WormBase:WBGene00061510" CDS join(798163..798172,798240..798408,800173..800626, 801443..801679,801730..801807) /locus_tag="CRE_13320" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94489.1" /db_xref="WormBase:CRE13320" /db_xref="WormBase:WBGene00061510" /translation="MRNSIVVIFLSIASSYVLCQISTSTIETTSEDPIPTKETTTYDS LGNDNFVVTYSEELANSFTGDLIQLIIYFHILPVVTTIMFALTIHNCLKRKAEQRRLR MKTQMYDHFTQIIKNGFCKYCYPSKEFYEEGHTREKVVPGCPEIPNKNETTATVTPPN QSTDQSTSASALNHLTSPQTKPVPYGTVGVPTERTPMPMSAKMMKKLRKEKKEQDEKA FKFKDKGPIVFHTQNIVAADVSSLFLSLLIIIFKFQLMIEERKEKDIKIKKVKWDENP IGYHETGVGVDQVDIPTPSTKGDTYSSIMTASIKQLKPH" gap 798686..799119 /estimated_length=434 gene complement(<802189..>808648) /gene="Cre-pssy-2" /locus_tag="CRE_13409" /db_xref="WormBase:WBGene00061509" mRNA complement(join(<802189..802380,802441..802606, 802654..802766,803380..803530,803583..803734, 805945..806157,806205..806412,807947..808117, 808593..>808648)) /gene="Cre-pssy-2" /locus_tag="CRE_13409" /product="CRE-PSSY-2 protein" /db_xref="WormBase:WBGene00061509" CDS complement(join(802189..802380,802441..802606, 802654..802766,803380..803530,803583..803734, 805945..806157,806205..806412,807947..808117, 808593..808648)) /gene="Cre-pssy-2" /locus_tag="CRE_13409" /note="contains similarity to Pfam domain PF03034 Phosphatidyl serine synthase; contains similarity to Interpro domain IPR004277 (Phosphatidyl serine synthase)" /codon_start=1 /product="CRE-PSSY-2 protein" /protein_id="EFO94357.1" /db_xref="InterPro:IPR004277" /db_xref="PFAM:PF03034" /db_xref="WormBase:CRE13409" /db_xref="WormBase:WBGene00061509" /translation="MTDSDSDDSEFELPRVASGERKLSTYLDRMELEKKHFDMINERI VDDVTMDQFYKPHSITVLVLVIAFLLYKAAFGKTDNTTEKNFYEGFLGAGALFLLISA LTFPNGPFIRPHPILWRVIFGLSVIYVIVLQFALFQNYEDLKKILTWLDPEGLGQKSL EEKEYASDCWDLSWEKIYSHVDFFAFSHFTGWIMKTLLLRHWVLCWFISIIWEFTELM FIDLLPNFAECWWDSLILDVLLCNGIGIYVGMKLCNFLQMRQFHWESIKNIKTRRGKM KRFALQFTPASWSGYDWFYSKSFSNAIRRTFLLTFLVSFWLLAELNTFFIKHIFAIDT KHPVVFWRIILIAVIAAPTIRQFYVFSTDPLTRRVGMQSWIFVVVCVLELAICMKCGG EVFAKTTLWKLGLWIASIMIGTIICIVASTWYAENFGSTARVTVKGRRRLCYLESSHE NLGILADDVIKKREEYLTSPKRH" gap 804911..804920 /estimated_length=10 gene complement(<809197..>810014) /locus_tag="CRE_13410" /db_xref="WormBase:WBGene00081200" mRNA complement(join(<809197..809803,809848..>810014)) /locus_tag="CRE_13410" /product="hypothetical protein" /db_xref="WormBase:CRE13410" /db_xref="WormBase:WBGene00081200" CDS complement(join(809197..809803,809848..810014)) /locus_tag="CRE_13410" /note="contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain; contains similarity to Interpro domain IPR001092 (Basic helix-loop-helix dimerisation region bHLH)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94397.1" /db_xref="InterPro:IPR001092" /db_xref="PFAM:PF00010" /db_xref="WormBase:CRE13410" /db_xref="WormBase:WBGene00081200" /translation="MSSQLALFFPKLHLQQQKLRKRRAEEKRMNAFNTAIGDIREELI QKKYGNEQDLKSHPSILILVAEIINKVDLKSKYPVEARRKCEGGKMKREVEKEVKARR EQMRRDKMTDALEHIREFIIRNRLGNGKLEQVTVLQIILDYLRTLPINVPDTPIASPS GSPFSSFSISSILSRTTLSPGLPTLTPSPPLTQPAGLSMGTPPQLLNFPSPFPMTPMD RTAFQLQFQFQYLQNQMMLQNLLNPNKATLLSHSYNSKL" gene complement(<811542..>811898) /locus_tag="CRE_13411" /db_xref="WormBase:WBGene00061508" mRNA complement(join(<811542..811847,811896..>811898)) /locus_tag="CRE_13411" /product="hypothetical protein" /db_xref="WormBase:CRE13411" /db_xref="WormBase:WBGene00061508" CDS complement(join(811542..811847,811896..811898)) /locus_tag="CRE_13411" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94490.1" /db_xref="WormBase:CRE13411" /db_xref="WormBase:WBGene00061508" /translation="MMFRLFIALALFSTVSAVTLAICQHYCSSVNGAASYDNCSPWIS FATQTNQTCYNLCVHNCAAVYDGACMTGNGYRCCLKTSPAKTQEFKVSGCNKLYNNLV " gene <813457..>813762 /locus_tag="CRE_13321" /db_xref="WormBase:WBGene00061507" mRNA <813457..>813762 /locus_tag="CRE_13321" /product="hypothetical protein" /db_xref="WormBase:CRE13321" /db_xref="WormBase:WBGene00061507" CDS 813457..813762 /locus_tag="CRE_13321" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94464.1" /db_xref="WormBase:CRE13321" /db_xref="WormBase:WBGene00061507" /translation="MFRLFIALALFSTVSAVTLAICQHYCSSVNGAASYDNCSPWISF ATQTNQTCYNLCVHNCAAVYDGACMTGNGYRCCLKTSPAKTQEFKVSGCNKLYNNLV" gene complement(<815049..>815876) /locus_tag="CRE_13412" /db_xref="WormBase:WBGene00081224" mRNA complement(join(<815049..815140,815181..815242, 815291..815405,815448..815513,815575..815745, 815792..>815876)) /locus_tag="CRE_13412" /product="hypothetical protein" /db_xref="WormBase:CRE13412" /db_xref="WormBase:WBGene00081224" CDS complement(join(815049..815140,815181..815242, 815291..815405,815448..815513,815575..815745, 815792..815876)) /locus_tag="CRE_13412" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94501.1" /db_xref="WormBase:CRE13412" /db_xref="WormBase:WBGene00081224" /translation="MKRTAIREKFDIEKERLERRKVQTRRKTQEILDSALIRKRREIG EFENRISNNVSIEDNFEILEPMSSEMIDLNWEPQPSILHFHEFKSSTRAITTMHDSIE EPDDFGFSSKFCNKSLNAHDEIKYRRQVRDTVESVINTSINYSLQNLRNYHYDIDLEQ LVYCSVKSEILPFALPMGRCEGNETETHRILQSTTT" gene complement(<816297..>816653) /locus_tag="CRE_13413" /db_xref="WormBase:WBGene00061506" mRNA complement(join(<816297..816602,816651..>816653)) /locus_tag="CRE_13413" /product="hypothetical protein" /db_xref="WormBase:CRE13413" /db_xref="WormBase:WBGene00061506" CDS complement(join(816297..816602,816651..816653)) /locus_tag="CRE_13413" /note="coded for by the following C. remanei cDNAs: DR780763" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94430.1" /db_xref="WormBase:CRE13413" /db_xref="WormBase:WBGene00061506" /translation="MMFRLFIALALFSTVSTVTLAICQHYCSSVNGAASYDNCSPWIS FATQTNQTCYNLCVHNCAAVYDGACMTGNGYRCCLKTSPAKTQEFKVSGCNKLYNNLV " gene <818256..>818561 /locus_tag="CRE_13322" /db_xref="WormBase:WBGene00061505" mRNA <818256..>818561 /locus_tag="CRE_13322" /product="hypothetical protein" /db_xref="WormBase:CRE13322" /db_xref="WormBase:WBGene00061505" CDS 818256..818561 /locus_tag="CRE_13322" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94467.1" /db_xref="WormBase:CRE13322" /db_xref="WormBase:WBGene00061505" /translation="MFRLFIALALFSTVSAVTLAICQHYCSSVNGAASYDNCSPWISF ATQTNQTCYNLCVHNCAAVYDGACMTGNGYRCCLKTSPAKTQEFKVSGCNKLYNNLV" gene <819669..>823351 /locus_tag="CRE_13323" /db_xref="WormBase:WBGene00061504" mRNA join(<819669..819826,820221..820298,820349..820470, 820515..820701,820749..820903,821520..821616, 821664..821999,822606..822978,823157..>823351) /locus_tag="CRE_13323" /product="hypothetical protein" /db_xref="WormBase:CRE13323" /db_xref="WormBase:WBGene00061504" CDS join(819669..819826,820221..820298,820349..820470, 820515..820701,820749..820903,821520..821616, 821664..821999,822606..822978,823157..823351) /locus_tag="CRE_13323" /note="contains similarity to Pfam domain PF00067 Cytochrome P450; contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR002402 (Cytochrome P450, E-class, group II), IPR002403 (Cytochrome P450, E-class, group IV), IPR002397 (Cytochrome P450, B-class)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94361.1" /db_xref="InterPro:IPR001128" /db_xref="InterPro:IPR002397" /db_xref="InterPro:IPR002401" /db_xref="InterPro:IPR002402" /db_xref="InterPro:IPR002403" /db_xref="PFAM:PF00067" /db_xref="WormBase:CRE13323" /db_xref="WormBase:WBGene00061504" /translation="MAFIFLSFIFAIFLSFLIHSIYNRRQKLKLRAKIGLDGPEPHWF LGNLKDIIDLTTRMGYNNAQEWHLQMRKKYGDRYAIFFGQQLSIFLCNEDDIKEVFIR NFSNFSDRGVVDIFRETKLNASLLQNTYADGWKHVRSAIAPIFSTGKMKAMHETMNTK IGTLLEILEEKSESGEKWDIYDDFQGLTLDVIGKCAFAIDSNCQRDRNDVFYVEARNF ITNIDLRQNPLIGTSIIIPELMWLWKLLYRFTGLASAELPMVGGLHNVYKRRRGGEGS DSVDLLKLLLDREDDKTNGMTKKEVIENCFAFLLAGYETTSTALTYCAYLLSRYPEVQ QRLYEEIEETKRTKHGLDYDSIHQMKYLDAVYKESLRYYPPVIHFISRTCLSDITIND QFYPKGCLVTVQANTVHRNKANWENPDKFDPDRFLESAESNQLKWIPFGIGPRYCVGM RFAEMEFKTTIVKLIEKFELSRIEGEPDLIPDCNGVIMRPKDPVRLSLKLRKQNKSTK IDFNVAPASKLIPTNKDLAKTEISVVTANVTDYKVREQHNFVESQLVLPPKQAVLLKL " gap 821300..821309 /estimated_length=10 gene complement(<823692..>825414) /locus_tag="CRE_13414" /db_xref="WormBase:WBGene00061503" mRNA complement(join(<823692..823778,823848..824557, 825075..>825414)) /locus_tag="CRE_13414" /product="hypothetical protein" /db_xref="WormBase:CRE13414" /db_xref="WormBase:WBGene00061503" CDS complement(join(823692..823778,823848..824557, 825075..825414)) /locus_tag="CRE_13414" /note="contains similarity to Pfam domains PF03951 (Glutamine synthetase, beta-Grasp domain), PF00120 (Glutamine synthetase, catalytic domain); contains similarity to Interpro domains IPR008147 (Glutamine synthetase, beta-Grasp), IPR014746 (Glutamine synthetase/guanido kinase, catalytic region), IPR008146 (Glutamine synthetase, catalytic region); coded for by the following C. remanei cDNAs: DR780833" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94476.1" /db_xref="InterPro:IPR008146" /db_xref="InterPro:IPR008147" /db_xref="InterPro:IPR014746" /db_xref="PFAM:PF00120" /db_xref="PFAM:PF03951" /db_xref="WormBase:CRE13414" /db_xref="WormBase:WBGene00061503" /translation="MSHLNYETRLPLGQATIDHFMGLPAHPSKCQATYVWIDGTGEQL RAKTRTFDVKPKYVSEYPVWNYDGSSTGQAEGDNSDRYLRPVAVFPDPFSGGHNVLVM CDTLDNEMKPTVTNHRQACAAIMKQVADQHPWFGMEQEYLIVDRDEHPLGWPKHGYPA PQGKYYCGVGADRAFGREVVETHYRACLHAGINIFGANAEVTPGQWEYQIGTCEGIDM GDQLWISRYILHRVAEMFGVCISLDPKPKVTMGDWNGAGCHTNFSTSEMRKPNGLTAI FEAMKGLEKTHLEAMKVYDPNGGQDNLRRLTGRHETSQADKFSWGVANRACSIRIPRQ VADEAKVRFSEKEWSLGYLEDRRPSSNCDPYLVTAMIVKSVLLD" gene <826717..>828424 /locus_tag="CRE_13324" /db_xref="WormBase:WBGene00061502" mRNA join(<826717..826800,826846..827040,827957..>828424) /locus_tag="CRE_13324" /product="hypothetical protein" /db_xref="WormBase:CRE13324" /db_xref="WormBase:WBGene00061502" CDS join(826717..826800,826846..827040,827957..828424) /locus_tag="CRE_13324" /note="contains similarity to Pfam domain PF00128 Alpha amylase, catalytic domain; contains similarity to Interpro domains IPR013781 (Glycoside hydrolase, subgroup, catalytic core), IPR006047 (Glycosyl hydrolase, family 13, catalytic region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94446.1" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR013781" /db_xref="PFAM:PF00128" /db_xref="WormBase:CRE13324" /db_xref="WormBase:WBGene00061502" /translation="MATKDALIAEEGNNFGGSGSGDIATFDKNAEVVNFELEPKPIGL TKEQLEKYRNDPFWKPVRTLRFVLARMGFDVRRCHRDRRFVTKVCREAELLTATFFDS DGDGVGDFAGISQKIDFLRKIGVTTVYPTPAIKIQKDEYFNSYDVVDHLSVDDRFGTE EQFKELIDTIHNRAMYLVMDLPVSTVDLSHPWLEKRDESKFVIAKPTDPGFNETNFYP FHGANNLKYLGYPSSQNPVLNWKDSEVKAI" gene complement(<828535..>828744) /locus_tag="CRE_13415" /db_xref="WormBase:WBGene00081215" mRNA complement(<828535..>828744) /locus_tag="CRE_13415" /product="hypothetical protein" /db_xref="WormBase:CRE13415" /db_xref="WormBase:WBGene00081215" CDS complement(828535..828744) /locus_tag="CRE_13415" /note="contains similarity to Pfam domain PF00012 Hsp70 protein; contains similarity to Interpro domains IPR001023 (Heat shock protein Hsp70), IPR013126 (Heat shock protein 70)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94458.1" /db_xref="InterPro:IPR001023" /db_xref="InterPro:IPR013126" /db_xref="PFAM:PF00012" /db_xref="WormBase:CRE13415" /db_xref="WormBase:WBGene00081215" /translation="MSKHNAVGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSCVAF TDSALLIGDAAENQAYRNPENTIFG" gene <829835..>831819 /locus_tag="CRE_13325" /db_xref="WormBase:WBGene00061501" mRNA join(<829835..830174,830619..831161,831425..831600, 831700..>831819) /locus_tag="CRE_13325" /product="hypothetical protein" /db_xref="WormBase:CRE13325" /db_xref="WormBase:WBGene00061501" CDS join(829835..830174,830619..831161,831425..831600, 831700..831819) /locus_tag="CRE_13325" /note="contains similarity to Pfam domains PF03951 (Glutamine synthetase, beta-Grasp domain), PF00120 (Glutamine synthetase, catalytic domain); contains similarity to Interpro domains IPR008147 (Glutamine synthetase, beta-Grasp), IPR014746 (Glutamine synthetase/guanido kinase, catalytic region), IPR008146 (Glutamine synthetase, catalytic region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94423.1" /db_xref="InterPro:IPR008146" /db_xref="InterPro:IPR008147" /db_xref="InterPro:IPR014746" /db_xref="PFAM:PF00120" /db_xref="PFAM:PF03951" /db_xref="WormBase:CRE13325" /db_xref="WormBase:WBGene00061501" /translation="MSHLNYETRLPLGQATIDHFMCLPAHPSKCQATYVWIDGTGEQL RAKTRTFDVKPKYVSEYPVWNYDGSSTGQAEGDNSDRYLRPVAVFPDPFSGGHNVLVM CDTLDNKMKPTVTNHRQACAAIMKQVADQHPWFGMEQEYLIVDRDEHPLGWPKHGYPA PQGKYYCGVGADRAFGREVVETHYRACLHAGINIFGANAEVTPGQWEYQIGTCEGIDM GDQLWISRYILHRVAEMFGVCISLDPKPKVTMGDWNGAGCHTNFSTSEMRKPNGLTAI FEAMKADLSKIGPARFFLRLEKTHLEAMKVYDPNGGQDNLRRLTGRHETSQADKFSWG VANRACSIRIPRQVADEAKGYLEDRRPPLQGYLEDRRPSSNCDPYLVTAMIVKSVLLD " gene <835902..>838158 /locus_tag="CRE_13326" /db_xref="WormBase:WBGene00081212" mRNA join(<835902..835981,836027..836356,836432..836569, 837948..>838158) /locus_tag="CRE_13326" /product="hypothetical protein" /db_xref="WormBase:CRE13326" /db_xref="WormBase:WBGene00081212" CDS join(835902..835981,836027..836356,836432..836569, 837948..838158) /locus_tag="CRE_13326" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94450.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE13326" /db_xref="WormBase:WBGene00081212" /translation="MSSEFPLFRLPLIVLNHGLKLMTPFEILSLSLCSKRCKTVCQSL RNQLKCKEKAVKFQLKCSKKREIQLEFNYYPNTRWIFESEKFMATKVNRETIIDKLYS IFQKKSSDNHKFSETTYGVHIPNWIPIEHSLEAIRDHIAGEKKLRPIIQGYIEKGYIV IIGYIESKGTVNLRAHRGAIIMGIPDGVLTIRSEETIEGPDGLSHRIKYSISREDGTI AEFLVENNKYLYIKMRDNTDIALSTFITKTKTMI" gap 836712..836721 /estimated_length=10 gene <840201..>840985 /locus_tag="CRE_13327" /db_xref="WormBase:WBGene00061500" mRNA join(<840201..840291,840519..>840985) /locus_tag="CRE_13327" /product="hypothetical protein" /db_xref="WormBase:CRE13327" /db_xref="WormBase:WBGene00061500" CDS join(840201..840291,840519..840985) /locus_tag="CRE_13327" /note="contains similarity to Pfam domain PF00128 Alpha amylase, catalytic domain; contains similarity to Interpro domains IPR013781 (Glycoside hydrolase, subgroup, catalytic core), IPR006047 (Glycosyl hydrolase, family 13, catalytic region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94514.1" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR013781" /db_xref="PFAM:PF00128" /db_xref="WormBase:CRE13327" /db_xref="WormBase:WBGene00061500" /translation="MQQFSLSYHSIYTRNWQVVGAIWVLCGLCTIIVHRNSSNIFLVD KYSPHWQFSNSESSRLASRFETPTAHLLSFLQLTLPGAVSVYYGQEYGLKNAMSKDGE LKQMGVMQWYPTGKDHHGFSKESDAPIFFPETDDKLEMDNYNSQFDISDSPLKIYRKL AKLRQRDEALIVGIKMTSNKKSVTS" gene complement(<841643..>842347) /locus_tag="CRE_13416" /db_xref="WormBase:WBGene00081198" mRNA complement(join(<841643..841699,841754..841865, 842046..>842347)) /locus_tag="CRE_13416" /product="hypothetical protein" /db_xref="WormBase:CRE13416" /db_xref="WormBase:WBGene00081198" CDS complement(join(841643..841699,841754..841865, 842046..842347)) /locus_tag="CRE_13416" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94378.1" /db_xref="WormBase:CRE13416" /db_xref="WormBase:WBGene00081198" /translation="MMPSPGGFLECRGYELVDSPDDSTPVPPIVWFPPPVPIRSSSLK YELVESSDGVTLPLNWFHPPVPIRSSSLTQKSIPLSMETTDESGYQVPRRKLLQKELL HPDDPTPPPKSPRKFRVLHFRVAPPVPFCAPFGKKKIKEYRVMDKDWEVKSLKF" gene <845690..>846176 /locus_tag="CRE_13328" /db_xref="WormBase:WBGene00081205" mRNA join(<845690..845734,845841..>846176) /locus_tag="CRE_13328" /product="hypothetical protein" /db_xref="WormBase:CRE13328" /db_xref="WormBase:WBGene00081205" CDS join(845690..845734,845841..846176) /locus_tag="CRE_13328" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94417.1" /db_xref="WormBase:CRE13328" /db_xref="WormBase:WBGene00081205" /translation="MGLATTLRQILTIVSRTAEQLSHPDHPEYTRQRVNVGQEPSPTS GDSPCNNIRTRLRPVTVYKRILRPARVVGGGVDPSSLQPTGEAIEVETWTSIRQGQQN QQEFQNEQGTQEGSLNQQQGTSCK" gap 848904..848913 /estimated_length=10 gene <849998..>851658 /gene="Cre-dpy-17" /locus_tag="CRE_13329" /db_xref="WormBase:WBGene00066405" mRNA join(<849998..850415,850955..>851658) /gene="Cre-dpy-17" /locus_tag="CRE_13329" /product="CRE-DPY-17 protein" /db_xref="WormBase:WBGene00066405" CDS join(849998..850415,850955..851658) /gene="Cre-dpy-17" /locus_tag="CRE_13329" /note="contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies)) (3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat); coded for by the following C. remanei cDNAs: DT934409, DT936995" /codon_start=1 /product="CRE-DPY-17 protein" /protein_id="EFO94493.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR008161" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF01484" /db_xref="WormBase:CRE13329" /db_xref="WormBase:WBGene00066405" /translation="MSTFAGIAACTLGATTMLLCICFVPQIYQQVSLLRDELTTEMEA WRLETDQLYMDMQKFGRVRRQAGGYGGYGGYGSGPSGPSGPSGPHGGFPGGPNSGFPG GSTGSSNPPTLPGVVGVPPSVTGHPGASPINPDGSPSEPLCRFTSFYVDLRITISFSA GPGDKCNCNTENSCPAGPAGPKGTPGHDGPDGIPGIPGVDGEDADDAKAQTQQYEGCF TCPAGPQGPPGSQGKPGARGMRGARGQAAMPGRDGSPGMPGSLGPVGPPGAAGEEGPT GEPGADVEHQIGLPGAKGTPGAPGESGDQGEQGDRGATGIAGPPGERGPQGEKGDDGP NGAAGSPGEEGEPGQDAQYCPCPQRNANAAVGGNQGYRN" gene <852475..>855601 /locus_tag="CRE_13330" /db_xref="WormBase:WBGene00081217" mRNA join(<852475..852515,852560..852706,853804..853920, 854446..854661,855039..855125,855529..>855601) /locus_tag="CRE_13330" /product="hypothetical protein" /db_xref="WormBase:CRE13330" /db_xref="WormBase:WBGene00081217" CDS join(852475..852515,852560..852706,853804..853920, 854446..854661,855039..855125,855529..855601) /locus_tag="CRE_13330" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94469.1" /db_xref="WormBase:CRE13330" /db_xref="WormBase:WBGene00081217" /translation="MNSGSSSTSSQTERDTHRETPYDSPYVNVSSLTVPTLPTNVSTL METKTEKPIKKVPVKKSTSKTPVLPSSPPTCLCGSPECHGAEAYDALVNKAADIDFRR AAPVMMQHPGTFNELRECELVEGQDDSYPVILPLHSCPSPSCAKEYENLVKKAQTVDP DVPWKHVKSVLLESREHDYINLTLRSPSPPGFDALPPPPRAISRAHQSSPPPSPQFPG PRRCCSIM" gap 853091..853100 /estimated_length=10 gap 853425..853434 /estimated_length=10 gene complement(<855795..>862113) /locus_tag="CRE_13417" /db_xref="WormBase:WBGene00066406" mRNA complement(join(<855795..855957,856225..856356, 856664..856753,856873..857014,857947..858213, 858380..858764,860412..860586,860636..860689, 860766..860816,860862..860953,861452..861590, 861647..>862113)) /locus_tag="CRE_13417" /product="hypothetical protein" /db_xref="WormBase:CRE13417" /db_xref="WormBase:WBGene00066406" CDS complement(join(855795..855957,856225..856356, 856664..856753,856873..857014,857947..858213, 858380..858764,860412..860586,860636..860689, 860766..860816,860862..860953,861452..861590, 861647..862113)) /locus_tag="CRE_13417" /note="contains similarity to Oryza sativa subsp indica Putative uncharacterized protein.; TR:A2YL51" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94411.1" /db_xref="WormBase:CRE13417" /db_xref="WormBase:WBGene00066406" /translation="MEDEENSSFQPENQSVHGENSLQIGLEEESSQQDMEIDSEEISE ERTEESSEEPSMEPSEAPPVESSDSAEAIEKSKIQKESFMEMFKIAPTIKDVLPDLRV FMEHPDVIDWDRREVQQIVELKIQEEKARKKAEKASRREQAEKQQPVVLADLIRSATG IDVAGILQKIPGVQQPPVVTAPPVMPVVQPVQPAFVAPPPTLSLSTSTITSVGHGKCG FGTPHPNEIPAELRKAKPDMIAPIPDELRVVQGGRAERKVPAIPNELLPPEQRVFESL PLVFVRPPMRKTLFLAGARCGKRSERLEAAEAEEEEKTGKKRKKNKGAEEQSFRGANR PFAPPESHRGRGGFSKPSRIPVVSGMNALPAGLNKNSPLAVKRYHARHLAKETGMTLE EAMAEIEEQCNEFGGEDTPEAREHDEKAMELIKKRGDEKWNQRYNYVPVDHSKGIPGV DRPPGVTKPPIGAKRDPVPGVDRPPIGARVDREPIPGVDRPPIGGGGREPIPGVDRPP GGHRYQGEPYDGEGDRGGRRERRRGGVKEREKKRRREEAFRGGPRGRGGGGGERGRGG RGGYDKWDERGYGGGAPKQARYDDYSSDRGYPRPYQAVGYGGYDDRRGYDDYYGRQDG YENYDGQHQYGEGGYEHQGGEGEGYAYDQHAAEAYYQGHEGQDATYYQEDGSQYYNEY YGTAEGGGGATGEGGAEYHATFDTPSTSHPPPPPPN" gap 858293..858302 /estimated_length=10 gap 858982..859397 /estimated_length=416 gene complement(<862636..>863942) /locus_tag="CRE_13418" /db_xref="WormBase:WBGene00066407" mRNA complement(join(<862636..862812,862860..863161, 863210..863335,863386..863445,863721..863828, 863873..>863942)) /locus_tag="CRE_13418" /product="hypothetical protein" /db_xref="WormBase:CRE13418" /db_xref="WormBase:WBGene00066407" CDS complement(join(862636..862812,862860..863161, 863210..863335,863386..863445,863721..863828, 863873..863942)) /locus_tag="CRE_13418" /note="contains similarity to Homo sapiens Isoform 1 of Serine/arginine repetitive matrix protein 1; ENSEMBL:ENSP00000326261" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94360.1" /db_xref="WormBase:CRE13418" /db_xref="WormBase:WBGene00066407" /translation="MSSTNSKKRGRRGKREEMPMFVPGCTRCHKLHMSMWCPEPLMAI DVPKPVQMKAGNDKKEEMSSTTISNNRSTTWKEAKTFGSDNNNSAHMKNRNGSVMEED PRFDRRRRGRGPAFRSAPQRFAPPQSSQTIQKPLMRNATSSHQSRSSPSKNVEPSERR SQAPNSTRRDERPVRSRPAQSYHLPKQPITRLPKAEMMISLNNELRPFSYGDENMYQE VPIAKQIPKTIPRVPENQMYVFRKRTYYDEHGNQVDERETATIVHLDGDELIFVDLND DFEF" gene complement(<864456..>874223) /locus_tag="CRE_13419" /db_xref="WormBase:WBGene00066408" mRNA complement(join(<864456..864650,864697..864873, 868786..869058,871511..871605,872707..872749, 874161..>874223)) /locus_tag="CRE_13419" /product="hypothetical protein" /db_xref="WormBase:CRE13419" /db_xref="WormBase:WBGene00066408" CDS complement(join(864456..864650,864697..864873, 868786..869058,871511..871605,872707..872749, 874161..874223)) /locus_tag="CRE_13419" /note="contains similarity to Pfam domains PF04676 (Protein similar to CwfJ C-terminus 2), PF04677 (Protein similar to CwfJ C-terminus 1); contains similarity to Interpro domains IPR006768 (Protein similar to CwfJ, C-terminal 1), IPR006767 (Protein similar to CwfJ, C-terminal 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94426.1" /db_xref="InterPro:IPR006767" /db_xref="InterPro:IPR006768" /db_xref="PFAM:PF04676" /db_xref="PFAM:PF04677" /db_xref="WormBase:CRE13419" /db_xref="WormBase:WBGene00066408" /translation="MGRFVVLIEFKEFSMDEWSEKGCAYGGALGAERIQKHKRIERSF DDCSRCIDSSRLAKHNIIAVGINTYLAVVEWDGLDDEHLIIVPTQHCSSSIQLDENVW DEMRLWRKGLVALWKEQNRDCIFFEMSRHVDSNPHVYIECVPLEQEIGDMAPIYFKKA INECEGEYMDNKKLIETKDLRRQIPKGFSYFAVDFGLSNGYAHVIESHDHFPATFATE IIAGMLDLPPKKWRKRETDEMSKQKSRAEKFKQLWEPYDWTKRLKNSEATSSAGSSSS SSSKR" gap 869729..870094 /estimated_length=366 gap 871861..872350 /estimated_length=490 gene <874610..>875370 /locus_tag="CRE_13331" /db_xref="WormBase:WBGene00069854" mRNA join(<874610..874748,874871..>875370) /locus_tag="CRE_13331" /product="hypothetical protein" /db_xref="WormBase:CRE13331" /db_xref="WormBase:WBGene00069854" CDS join(874610..874748,874871..875370) /locus_tag="CRE_13331" /note="contains similarity to Pfam domain PF00024 PAN domain; contains similarity to Interpro domains IPR003609 (Apple-like), IPR003014 (N/apple PAN)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94386.1" /db_xref="InterPro:IPR003014" /db_xref="InterPro:IPR003609" /db_xref="PFAM:PF00024" /db_xref="WormBase:CRE13331" /db_xref="WormBase:WBGene00069854" /translation="MFVLSLALLSCLTTMCTSTTEWWGDLRAHLNPARQAPFYDVTYD EKVNVCPQGLHADAIPEYVYFGTMLATMTVDEHDQCLQKCAEKPRCKAVNFFHPFAYQ EKGFCELLTEGQLDNPSLMRPFRKATYYEKIRCRELDDVEDVDEAEKSEITESEFSIF ILYITSSIHFFPEVPEDMIREKKLDMSKLMKKLSAKVKEFNGASGGFRAARR" gap 877520..877852 /estimated_length=333 gene complement(<879323..>887510) /locus_tag="CRE_13420" /db_xref="WormBase:WBGene00066410" mRNA complement(join(<879323..879326,879653..879698, 883713..883833,883885..884001,884134..884301, 885287..885451,887394..>887510)) /locus_tag="CRE_13420" /product="hypothetical protein" /db_xref="WormBase:CRE13420" /db_xref="WormBase:WBGene00066410" CDS complement(join(879323..879326,879653..879698, 883713..883833,883885..884001,884134..884301, 885287..885451,887394..887510)) /locus_tag="CRE_13420" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8Q6S0" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94388.1" /db_xref="WormBase:CRE13420" /db_xref="WormBase:WBGene00066410" /translation="MFRRPDDDDDDYSGRKVVKPKPIAEKYAKKLGSEFATGKTFVTG SDKSQKDFYGSQQVRNDVMGSSGSGSTPLTEDEKNKLSAKILKAEMKGDTDLVKKLKR KLESGVSGEDEPPKSRSKDVTMMRRDREGNILPASSSSRRSDSDRHAEGSSRMRREYE KSQDLDSMVREEKTGTAGDQLRLFEKQLIKSSKIRRHDDESVDDIAEMQKGRKKTDEK DKKRKEKEAIKVVRQSLCYYTLPKIIN" gap 892253..892262 /estimated_length=10 gene <894257..>900695 /locus_tag="CRE_13332" /db_xref="WormBase:WBGene00066411" mRNA join(<894257..894372,894416..894511,896648..896776, 897111..897405,898491..898567,898614..898724, 899058..899331,899815..900096,900660..>900695) /locus_tag="CRE_13332" /product="hypothetical protein" /db_xref="WormBase:CRE13332" /db_xref="WormBase:WBGene00066411" CDS join(894257..894372,894416..894511,896648..896776, 897111..897405,898491..898567,898614..898724, 899058..899331,899815..900096,900660..900695) /locus_tag="CRE_13332" /note="contains similarity to Pfam domain PF00534 Glycosyl transferases group 1; contains similarity to Interpro domain IPR001296 (Glycosyl transferase, group 1); coded for by the following C. remanei cDNAs: DY526278, DR778014" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94463.1" /db_xref="InterPro:IPR001296" /db_xref="PFAM:PF00534" /db_xref="WormBase:CRE13332" /db_xref="WormBase:WBGene00066411" /translation="MSETEPSVLCNLITTILYLIPLTVALLVIPFKLISDTRRKSNTI GFFHPYCNAGGGGERVLWAAIRTMQKKYPNHKYYVYSGDTDATKEQILLKARQRFGIE LDPTNIEFIYLNWRSLVEAHHYKHFTMLFQALAGLALALEAWCRLVPEIFIDSMGYPL SLPAFRMAGSKVVAYVHYPTISCDMLDVVESRQETFNNSSTIAQSNLLSWAKLAYYRL FALLYWLAGKAAHVVMVNGSWTQRHITSIWSRRDVSIVYPPCDVEAFLNIESVAETLL EETKTVRLLSVGQIRPEKNHKLQLEVLADVKEPLKKKGYKVELCIAGGCRNEEDQERV KSLKKEAKEMGIDEQLVWQLNVPYEDLVAELSKALISIHTMHNEHFGISVVEAMAAST VILSNDSGGPKMDIVKDFEGHCVGYLSITREEYAETILKIVEEGKRKRDDIRKWARKS LTRFGENAFETHWNNQIEKVL" gap 900975..901260 /estimated_length=286 gene <902257..>904510 /gene="Cre-ykt-6" /locus_tag="CRE_13333" /db_xref="WormBase:WBGene00066412" mRNA join(<902257..902442,902951..903100,904241..>904510) /gene="Cre-ykt-6" /locus_tag="CRE_13333" /product="CRE-YKT-6 protein" /db_xref="WormBase:WBGene00066412" CDS join(902257..902442,902951..903100,904241..904510) /gene="Cre-ykt-6" /locus_tag="CRE_13333" /note="contains similarity to Pfam domain PF00957 Synaptobrevin; contains similarity to Interpro domains IPR010908 (Longin), IPR001388 (Synaptobrevin)" /codon_start=1 /product="CRE-YKT-6 protein" /protein_id="EFO94396.1" /db_xref="InterPro:IPR001388" /db_xref="InterPro:IPR010908" /db_xref="PFAM:PF00957" /db_xref="WormBase:CRE13333" /db_xref="WormBase:WBGene00066412" /translation="MKLYSVHVLHKDVGTEAVRIFKSESDLSSFSFFQRGSVQEFMTF TSKLLVERSGPGTRSSVKENEYLVHCYVRNDGLSAVCVADSEYQQRVAMSFLGRVLDD FTSKVPAVQWPGIKTEKDCSYSGLKELLDRWQNPREADPMTRVQEEVEETKMVMHNTI QSVLDRGEKLDDLVKKSENLSDQSKMFYTSARKMNKCCNYV" gene <905354..>911380 /locus_tag="CRE_13334" /db_xref="WormBase:WBGene00066413" mRNA join(<905354..905585,906617..906693,906742..906888, 907758..907943,909321..909870,911175..>911380) /locus_tag="CRE_13334" /product="hypothetical protein" /db_xref="WormBase:CRE13334" /db_xref="WormBase:WBGene00066413" CDS join(905354..905585,906617..906693,906742..906888, 907758..907943,909321..909870,911175..911380) /locus_tag="CRE_13334" /note="contains similarity to Pfam domain PF00328 Histidine acid phosphatase; contains similarity to Interpro domain IPR000560 (Histidine acid phosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94419.1" /db_xref="InterPro:IPR000560" /db_xref="PFAM:PF00328" /db_xref="WormBase:CRE13334" /db_xref="WormBase:WBGene00066413" /translation="MALPPPLATFLLILLFFIGEIRCVAVSKEVGILADTDTLEYVHT VWRHGDRTPAEYLFPEDSRKWPEGIGELTEEGAAQQYRLGQWLRKRYGSWLGEKFNRN TIYIRSSDYNRTLMSAQANMAGLFPPKHAISEGLMWQPIPVHTRPKPMDKELYEEVSC PTAEIEMNKQWKSEKADGIRRKFAAELKFFSEKLNLPDMELKATWKIYDNLFCESEHN ISWPSWMNSSIFSRVNDLYNEVSQLEFHTDTLRRLRGGTLLEEIFHRFSDKSNGKLGN EAKFYAYSAVSENASKARQTFYFQHDSTIAALLATLGIFYEIYPKYATCLLIEMHKMP NETRVIRVFHKNDTDIDRLIEYSIPGCDAPCTLESLGKDLSKYFPDDWEKECGLVQGG ELVYLVALVLFFSTTCSCAMLFMEKCKKRILRFSSARSGHDAESLLEHYHEHDHDHDH DHDHDHDHGHDIDYD" gene complement(<911789..>914164) /locus_tag="CRE_13421" /db_xref="WormBase:WBGene00081227" mRNA complement(join(<911789..911901,912555..912729, 912774..912877,912926..913115,913159..913295, 913351..913596,914128..>914164)) /locus_tag="CRE_13421" /product="hypothetical protein" /db_xref="WormBase:CRE13421" /db_xref="WormBase:WBGene00081227" CDS complement(join(911789..911901,912555..912729, 912774..912877,912926..913115,913159..913295, 913351..913596,914128..914164)) /locus_tag="CRE_13421" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94512.1" /db_xref="WormBase:CRE13421" /db_xref="WormBase:WBGene00081227" /translation="MCNIGKLRITGGSWFSDNELQALRIYFSSTSFIFQVYVPVLQSS AGVLPIALFGASNIINSEKFVLSHLLDSVCVLLPAITIFIGCAIIVKMGTTCEFGFRR VLVTGILNLEIKRNIVKWALNYSLFCNTELSDSRNQDMVALILHFRSVEKCQKFVEGV TDIYTEQGLFAQKLEDLEGLKGLETSRKVNPVHSCNSSTSFKNGYKKGEKSIISRVIE TVLLRQVNARKLVVRLFRWKIDWNLVFNAMVLLSSTASLFSTYVSTDFASKTLQHGYF FGIAYGIIGSVMGIFARLWKGDADKPTMVGVIVVPERIEGSNDIQWILHIRNSSTYN" gap 921071..921380 /estimated_length=310 gene <924831..>930601 /locus_tag="CRE_13335" /db_xref="WormBase:WBGene00066416" mRNA join(<924831..925229,925329..925415,927608..927684, 929679..929732,930331..>930601) /locus_tag="CRE_13335" /product="hypothetical protein" /db_xref="WormBase:CRE13335" /db_xref="WormBase:WBGene00066416" CDS join(924831..925229,925329..925415,927608..927684, 929679..929732,930331..930601) /locus_tag="CRE_13335" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94511.1" /db_xref="WormBase:CRE13335" /db_xref="WormBase:WBGene00066416" /translation="MNFDCWPLLSTLITLTLSVMFPRIFLPVNYLDKREKRSQVSGRH PDKTTTFQIFRAIYNNSLPCSDLSIFSRPPPPHDWRGNPIRNSWGDSYSRCPNIGTLS ASWTFMTFSHYTMTYRPAYTFDEPFAGNGPQIAVVFAIVIGGVILLALVILAIYAVVV KGMRGDDKQRLHSGRNSAQWAQPQQQYREQPASDFAYNPAPTQNFDYNAQIRTPVNAT SYTPVPSVTPYNVAPQQYSNVPLATPTTQQYVQSQAIPQYAPDVIYTQGPTGYVQQQP VEYSVQRQSPGANFVQSSV" gap 926770..926779 /estimated_length=10 gap 928797..928879 /estimated_length=83 gene <933088..>935796 /locus_tag="CRE_13336" /db_xref="WormBase:WBGene00066417" mRNA join(<933088..933393,934244..934365,934425..934582, 935549..>935796) /locus_tag="CRE_13336" /product="hypothetical protein" /db_xref="WormBase:CRE13336" /db_xref="WormBase:WBGene00066417" CDS join(933088..933393,934244..934365,934425..934582, 935549..935796) /locus_tag="CRE_13336" /note="contains similarity to Pfam domain PF06879 Protein of unknown function (DUF1261); contains similarity to Interpro domain IPR009673 (Protein of unknown function DUF1261)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94462.1" /db_xref="InterPro:IPR009673" /db_xref="PFAM:PF06879" /db_xref="WormBase:CRE13336" /db_xref="WormBase:WBGene00066417" /translation="MSYHSLPHLFSPFPRHPLPLFQTKFVKVFVSLKNKVNSSKTMLL KTVIGLSSVALVAGLFNPLLPSLGDYLLNEKQVKTYFSTGSKDLALGTCNSIPFASAQ AGFASAVGLPVTTTWRDANILTNATITMIDQGIDQLAAVCGARQLFVQTLGFTYDTCI DRFYLISLGNTDWWNVMQYTHLMKHLEFICSTGFDVYQNNIDCIRKGETTDGNQYRAC FYKFNATVNANPNNFCGATESFIGCIKDFFTTECNGYVGWMQCELERIGFAYDCYGLS C" gap 936457..937031 /estimated_length=575 gene <937836..>939606 /locus_tag="CRE_13337" /db_xref="WormBase:WBGene00066418" mRNA join(<937836..938056,938712..>939606) /locus_tag="CRE_13337" /product="hypothetical protein" /db_xref="WormBase:CRE13337" /db_xref="WormBase:WBGene00066418" CDS join(937836..938056,938712..939606) /locus_tag="CRE_13337" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94351.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13337" /db_xref="WormBase:WBGene00066418" /translation="MSAEVYRILWETKQYDIVHSLPPSLHRRLFSLTLCPLATTRIDN SFRMEPIFPLLRLPENVILEVIKNLCASRWLEFSLISTKTKNLVASLGIKADDVRINI SHDVGITMFCRYFNTRLTFYNDSVDQAALIHLDSNQPISAYSFSGRRTVQSSIPFSFN NWLDHIKTVFCYNKPPNVVFWTGNERFEMDSLKNTIKSVNQLHVSGGNTEFRSREILE HFKNANELSLTTNPFEEACEVQKYFIRNCNSLIFRDFVSLDDMLLVNSKKVEFSRFMS QKQFNQYLKHWIRGSNPRLQCMTLPINKIDSVNGEVYLKGINCIEMSEKSKKEIRQKH GISDIKMVKIRRKEGTTAVIATKNCANFFYVRFYVLY" gene <940048..>941075 /locus_tag="CRE_13338" /db_xref="WormBase:WBGene00066419" mRNA join(<940048..940180,940231..>941075) /locus_tag="CRE_13338" /product="hypothetical protein" /db_xref="WormBase:CRE13338" /db_xref="WormBase:WBGene00066419" CDS join(940048..940180,940231..941075) /locus_tag="CRE_13338" /note="contains similarity to Bombyx mori Transposase.; TR:P90693" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94379.1" /db_xref="WormBase:CRE13338" /db_xref="WormBase:WBGene00066419" /translation="MAPPSPHRSSILNLFKAGVPPVDIIKRLGVPSTMIRFLVSKSLA HRIKAVKERIRRNPHRSIRKMAKGMKISSRSMGRIVKDKLKLTCYRVRKAASLSEATT KKRLERSKKLLQRTRNGEHLVTVFSDEKLFTVQAEFNPQNHRVLAETSEEAFANGRTI HQASHPASVMVFGAVCADGKSPLLFVDQGVKINKEVYISQILEKTLLPWAQKHFNGRR WVFQQDGAPAHTAKLSQQWCETHLPAFIPKDEWPPSSPDLNPLDYSIWGVLQNKVNAK PHSSIEALKKTLVKEWDALSPEYLRATIDAYPRRLRAVIEKRGGRMEQD" gene complement(<942403..>943834) /locus_tag="CRE_13422" /db_xref="WormBase:WBGene00081207" mRNA complement(join(<942403..942564,943745..>943834)) /locus_tag="CRE_13422" /product="hypothetical protein" /db_xref="WormBase:CRE13422" /db_xref="WormBase:WBGene00081207" CDS complement(join(942403..942564,943745..943834)) /locus_tag="CRE_13422" /note="contains similarity to Pfam domain PF01545 Cation efflux family; contains similarity to Interpro domain IPR002524 (Cation efflux protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94428.1" /db_xref="InterPro:IPR002524" /db_xref="PFAM:PF01545" /db_xref="WormBase:CRE13422" /db_xref="WormBase:WBGene00081207" /translation="MTENQKKYSKRIKGAPLLEGAPLLFKPLFKVHIVLDQNMSLKVT HDIAESLQTGIESLPEIERAFVHCDYEFEHHPQDEHKAV" gene <944246..>946036 /locus_tag="CRE_13339" /db_xref="WormBase:WBGene00066420" mRNA join(<944246..944454,945142..>946036) /locus_tag="CRE_13339" /product="hypothetical protein" /db_xref="WormBase:CRE13339" /db_xref="WormBase:WBGene00066420" CDS join(944246..944454,945142..946036) /locus_tag="CRE_13339" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94497.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13339" /db_xref="WormBase:WBGene00066420" /translation="MSAEYSGKPNNTTFSIHCLLAYTVDYSLLTSAQSASRIDNSFRM EPTFPLLRLPENVILEVIKNLCASRLLKFSLISTKTKNIVASLGIEADYVCINIYLDV DITMFCRYFNTRLTFYNDSVDQAALIHLDSNQPISAYSFSRRRTVQSSIPFSFKNWLD HINTVFCYNKPPNVVFFPGNERFEMGALKNAIKSLNQLVLAGERTEFRSREILKHFKN ANELILRRNPFEEACEVQKYFIQNCNNLVFRDFVSLDDMLLVNSKKVEFSRLMSQKQF NQFLKHWIRGSNPRLQYMNLSIDRTNLDDGKVYLKGIRCIEMSEELKKEIRQKHGISD IEMVKIRRKEGTTAVIATKDYGTFLYVRFYVLY" gap 944583..944745 /estimated_length=163 gene complement(<947950..>948566) /locus_tag="CRE_13423" /db_xref="WormBase:WBGene00081225" mRNA complement(join(<947950..948111,948528..>948566)) /locus_tag="CRE_13423" /product="hypothetical protein" /db_xref="WormBase:CRE13423" /db_xref="WormBase:WBGene00081225" CDS complement(join(947950..948111,948528..948566)) /locus_tag="CRE_13423" /note="contains similarity to Pfam domain PF01545 Cation efflux family; contains similarity to Interpro domain IPR002524 (Cation efflux protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94508.1" /db_xref="InterPro:IPR002524" /db_xref="PFAM:PF01545" /db_xref="WormBase:CRE13423" /db_xref="WormBase:WBGene00081225" /translation="MGRPTFFREFWKTVHIVLDQNMSLKVTHDIAESLQTGIESLPEI ERAFVHCDYEFEHHPQDEHKAV" gene <948843..>949914 /locus_tag="CRE_13340" /db_xref="WormBase:WBGene00066422" mRNA join(<948843..948922,949023..>949914) /locus_tag="CRE_13340" /product="hypothetical protein" /db_xref="WormBase:CRE13340" /db_xref="WormBase:WBGene00066422" CDS join(948843..948922,949023..949914) /locus_tag="CRE_13340" /note="contains similarity to Pfam domains PF07735 (F-box associated), PF00646 (F-box domain); contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94507.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF00646" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE13340" /db_xref="WormBase:WBGene00066422" /translation="MEPTFPLFRLPENVIIEVIKNWWINELFDFSLISTKTKNIVASL GIEADYVRIHISLDVDITVYYGLCITSLVFYNDLVDQDALIHLDSNQPISAYYHYKNR TIRSSAPFSFNNWVDHIRTVFCYSKPPNVVFWTGNRKFEMESLKNTIKSVNQLYVSGD NTQSRSREILEHFKNANELSLPTNPFEEACEVQKYFIQNCNSLIFRDFVSLDNMLLVN SEKVEFSRLMSQKQFNQFLKHWIRGSNPRLQCMTLPINKIDSVNGEVYLKGINCIEMS EQSKKEIRQKHGISDIEMVQIRRNDGTTAVITTKYWVASNHIRFNVL" gene complement(<950193..>954178) /locus_tag="CRE_13424" /db_xref="WormBase:WBGene00066421" mRNA complement(join(<950193..950195,950366..950756, 951748..951850,953210..953792,954025..954085, 954135..>954178)) /locus_tag="CRE_13424" /product="hypothetical protein" /db_xref="WormBase:CRE13424" /db_xref="WormBase:WBGene00066421" CDS complement(join(950193..950195,950366..950756, 951748..951850,953210..953792,954025..954085, 954135..954178)) /locus_tag="CRE_13424" /note="contains similarity to Pfam domain PF01545 Cation efflux family; contains similarity to Interpro domain IPR002524 (Cation efflux protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94420.1" /db_xref="InterPro:IPR002524" /db_xref="PFAM:PF01545" /db_xref="WormBase:CRE13424" /db_xref="WormBase:WBGene00066421" /translation="MSDSGRLEDPNPDASASSSNTTTTTTSEEERLVKNAQCAKKELE AYYKKQNEILDHYKQDSEQIEATRRTRIRLRSSTAVSGDSSAESDVENQQEALRRAST ISMKSSKDSLLLRHEDAQNEELKLAKAAARLANITLLVNLVLMIAKIVASYLSGSMSI ISSMVDSVVDLTSGAVLSISSRMIRKRDPYQYPRGRTRVEPLSLILISVIMGMASVQL IISSVTRIHDAAADGQKDEINVSWPTIGIMGSTIAVKLTLFFVCQKYKSNSSIKVLSL DHRNDCISITMALACAWLAYYYGAKPGESNTGVSLLGLCPSTGCDLYYLDPTGAIIVS FYILYTWIRTGYAHFVMLSGKSARPELINRIIHQCIEHDPRITHIDTVYVYHYGTKFL VE" gap 951327..951336 /estimated_length=10 gap 952200..952209 /estimated_length=10 gene <955064..>956820 /locus_tag="CRE_13341" /db_xref="WormBase:WBGene00066423" mRNA join(<955064..955087,955164..955230,955278..955372, 955487..955604,955651..955778,955873..955983, 956154..956348,956398..956593,956639..956732, 956778..>956820) /locus_tag="CRE_13341" /product="hypothetical protein" /db_xref="WormBase:CRE13341" /db_xref="WormBase:WBGene00066423" CDS join(955064..955087,955164..955230,955278..955372, 955487..955604,955651..955778,955873..955983, 956154..956348,956398..956593,956639..956732, 956778..956820) /locus_tag="CRE_13341" /note="coded for by the following C. remanei cDNAs: DR781526, DR406304" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94387.1" /db_xref="WormBase:CRE13341" /db_xref="WormBase:WBGene00066423" /translation="MKGSMTDEDYLQFNSEAFLRELAADLADSGNQSDRFSAPRRRHE DRIPVFTRGACGNPNSDQCYNRPRLSNTLSLKGLVERSQHYNQSIDRRVMTDARIAFE EEQLKCGRTEESDDLATSCQNIPKRGRGDYFGKMRSAGVSEADSGENTSSATLTPSST DFSNNNTANFYNNNNNTFKKTPNCLKFRQWRQPNHWNDDSRNETIDDERSFSYQPPRR FTSPFAETDDQSSQPRHHFNPDTAYKGKITPDFRFNYNPQATATIPFPHVVAPVNVVY PGVVPLVKPLVVTSAASVTPIRLGQRYPKRPDNNPPQPSVPRHLNHNYYQIELYGATQ EERIAQRIEKTVRQTEAPIRRF" gene <957116..>957655 /gene="Cre-acbp-4" /locus_tag="CRE_13342" /db_xref="WormBase:WBGene00066424" mRNA join(<957116..957182,957233..957429,957479..>957655) /gene="Cre-acbp-4" /locus_tag="CRE_13342" /product="CRE-ACBP-4 protein" /db_xref="WormBase:WBGene00066424" CDS join(957116..957182,957233..957429,957479..957655) /gene="Cre-acbp-4" /locus_tag="CRE_13342" /note="contains similarity to Pfam domain PF00887 Acyl CoA binding protein; contains similarity to Interpro domains IPR014352 (FERM/acyl-CoA-binding protein, 3-helical bundle), IPR000582 (Acyl-CoA-binding protein, ACBP)" /codon_start=1 /product="CRE-ACBP-4 protein" /protein_id="EFO94394.1" /db_xref="InterPro:IPR000582" /db_xref="InterPro:IPR014352" /db_xref="PFAM:PF00887" /db_xref="WormBase:CRE13342" /db_xref="WormBase:WBGene00066424" /translation="MGVSLDEKFKSAAWIIQALPKDGPIKTTVTDQLLMYSLYKQATI GPCNTEQPYFFRIEERLKWNAWNELGNMEKDEAKAKYVEKMLELCDEAEKEHDLLNFL NDPTVAELLPKQNELREHFGNLGKTTVKGFEGETVTVNGVSISF" gene <957967..>963341 /locus_tag="CRE_13343" /db_xref="WormBase:WBGene00081194" mRNA join(<957967..957990,958212..958435,958488..958602, 958789..959219,960114..960800,961865..962127, 963066..963146,963211..>963341) /locus_tag="CRE_13343" /product="hypothetical protein" /db_xref="WormBase:CRE13343" /db_xref="WormBase:WBGene00081194" CDS join(957967..957990,958212..958435,958488..958602, 958789..959219,960114..960800,961865..962127, 963066..963146,963211..963341) /locus_tag="CRE_13343" /note="contains similarity to Anopheles gambiae str PEST AGAP004734-PA.; TR:A0NFH8; coded for by the following C. remanei cDNAs: DR409188" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94364.1" /db_xref="WormBase:CRE13343" /db_xref="WormBase:WBGene00081194" /translation="MSVVIQEKAIPVIGVPPPPQPPPVPKLSDIPPLIPNKPKTLQNP TKRIPKKAPQPQNQNPPKNPGVKKIKRSKWLGPKNESELITETGLPKSENGSFVKANE QKLTAMEQKAYSLYLDAHMSLAADNMTKKAKRRHRFQLQLKWLLNKAVMMNYVNKGEL AKELAKEAAEKGEKALPKEDVQKAPAPPKEKIPKTPKAPQQQKLPSMRQPKQSKYKLD NRQKVASLMDVQLPKSDDMYYHNQSATTDYQSSSDSSRGYQYLEENWINADKPWRSFQ TSSSSYPTSSDYSQYHSSSMNEPMQSYPLSTSSTIDYSAYPPMSSSYAAPLNFATHQP PPSYSSFPSQLTTNPMPPSFSQPPPDFTQAPPNFIPSISEFNIPQGYVSEYRQQFPEQ PQSIQNSFPPNQSYSPFSTAGLPLETALEVSEEELARQKRLLEIEEELREINAKKLRM QMEDEMRQREYQLALQEQEIQERERQIRDREMFMQEGRAPGRDRRRRYDDRGSYYQDE RDDGYYRSSEPRHSSSSSKSNSHSNPRQIKIERDPEDAAAARRHGQPSQQQQQQPQKK SLPRKMMKRNGGGEEGNTSLKRSAESGSHDDIGNNIAGRIQPAKKQRVRHQKVPHAKL DMQAISDDEAGTHNFDYRPISDDEADI" gene <963604..>966285 /gene="Cre-gos-28" /locus_tag="CRE_13344" /db_xref="WormBase:WBGene00066425" mRNA join(<963604..963706,964141..964250,964301..964449, 964502..964586,965044..965176,966161..>966285) /gene="Cre-gos-28" /locus_tag="CRE_13344" /product="CRE-GOS-28 protein" /db_xref="WormBase:WBGene00066425" CDS join(963604..963706,964141..964250,964301..964449, 964502..964586,965044..965176,966161..966285) /gene="Cre-gos-28" /locus_tag="CRE_13344" /note="contains similarity to Pfam domain PF05008 Vesicle transport v-SNARE protein; contains similarity to Interpro domain IPR007705 (Vesicle transport v-SNARE)" /codon_start=1 /product="CRE-GOS-28 protein" /protein_id="EFO94398.1" /db_xref="InterPro:IPR007705" /db_xref="PFAM:PF05008" /db_xref="WormBase:CRE13344" /db_xref="WormBase:WBGene00066425" /translation="MSETWEALRKKARSTENSIDVKLVSLNKLTASSHGGFDIDEKTV SSRQTSFRTVTTEIEGLIEQLTNINDDMNDVAGAQSSASWANNPAIQHTLRRHREILR DYGSEYRRARDNVDQVLQRELLLSSSNESSRNPAVNNRARGYDMYLKENDHINACDRL LDEQIEMAMSTKENVARQGINLRGISNRLHYIAKKYPAINNLMQKIKTKKQKNTMILA GVISACLIFTIFWIIN" gene <966747..>968474 /locus_tag="CRE_13345" /db_xref="WormBase:WBGene00066426" mRNA join(<966747..966844,967136..967438,967484..967571, 968277..>968474) /locus_tag="CRE_13345" /product="hypothetical protein" /db_xref="WormBase:CRE13345" /db_xref="WormBase:WBGene00066426" CDS join(966747..966844,967136..967438,967484..967571, 968277..968474) /locus_tag="CRE_13345" /note="contains similarity to Pfam domain PF00834 Ribulose-phosphate 3 epimerase family; contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR000056 (Ribulose-phosphate 3-epimerase); coded for by the following C. remanei cDNAs: DY525893, DR409533, DR777171" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94382.1" /db_xref="InterPro:IPR000056" /db_xref="InterPro:IPR013785" /db_xref="PFAM:PF00834" /db_xref="WormBase:CRE13345" /db_xref="WormBase:WBGene00066426" /translation="MPLRAYVCPSILNADLASLASECKKLLTAGADWLHLDVMDGHFV PNLTFGHPVVESLRKSLGSEPFFDVHLMVSNPGQWVEPMAKAGATQFTFHYEAIDGGD VAVGELIEKIRKSGMKVGLSVKPGTSVEHILKHAEHLDNALIMTVEPGFGGQKFMENM MEKVRTIRSAHPELTIQVDGGVTPENIDISAKAGANAIVSGTGIIKAPDQSVAISTIK NAVEAVIGKH" gene complement(<968587..>971929) /locus_tag="CRE_13425" /db_xref="WormBase:WBGene00081226" mRNA complement(join(<968587..969027,969831..969931, 969991..970083,970172..970293,971925..>971929)) /locus_tag="CRE_13425" /product="hypothetical protein" /db_xref="WormBase:CRE13425" /db_xref="WormBase:WBGene00081226" CDS complement(join(968587..969027,969831..969931, 969991..970083,970172..970293,971925..971929)) /locus_tag="CRE_13425" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94510.1" /db_xref="WormBase:CRE13425" /db_xref="WormBase:WBGene00081226" /translation="MRCPFSLFQACQILLPIGICKQICHPHHIGTVNANYAQKGQKQD VKPGTKDNRYPEDVTFPPSDIEKVYDIMGDEDARKSKTLTLVSLEEGSIEEKAPPVKE NENEKKKPTVTPTVPAPRTPPNHARLPSREILLTPKQSLKTANEGTRKTTSMETIGPA TTKGTPSREQLTPINNGSGGARRGRSREMIGPPGDDVIRRPNGTPSREQTSGSVERRT PSKETNSKKVSALYCTPKSEFLQANPPKMGTAEPI" gene complement(<972364..>974813) /locus_tag="CRE_13426" /db_xref="WormBase:WBGene00081204" mRNA complement(join(<972364..972468,974325..974593, 974642..>974813)) /locus_tag="CRE_13426" /product="hypothetical protein" /db_xref="WormBase:CRE13426" /db_xref="WormBase:WBGene00081204" CDS complement(join(972364..972468,974325..974593, 974642..974813)) /locus_tag="CRE_13426" /note="contains similarity to Pfam domain PF05804 Kinesin-associated protein (KAP); contains similarity to Interpro domain IPR008658 (Kinesin-associated)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO94410.1" /db_xref="InterPro:IPR008658" /db_xref="PFAM:PF05804" /db_xref="WormBase:CRE13426" /db_xref="WormBase:WBGene00081204" /translation="MTTQLHEGIDESEEVTVLRDIKPLQLQIVIVCGTMARQLDAARL LVPLIDTFVQLLQSSQIDDEFVVQLLYVFLQLLKHKELSARLMTQDSALGAHMIDLMH DANAAVREVCDNALLIMGEHSEDWAKRIAGERFKWHNAQWLEMVERDDHEFAPYDDED FGADFNFDTFDNDFDINEKLF" CONTIG join(AAGD02004551.1:1..84209,gap(10),AAGD02004552.1:1..66258, gap(10),AAGD02004553.1:1..17728,gap(415),AAGD02004554.1:1..30125, gap(10),AAGD02004555.1:1..4126,gap(209),AAGD02004556.1:1..3377, gap(191),AAGD02004557.1:1..1347,gap(10),AAGD02004558.1:1..25157, gap(10),AAGD02004559.1:1..6375,gap(381),AAGD02004560.1:1..2081, gap(10),AAGD02004561.1:1..5002,gap(781),AAGD02004562.1:1..893, gap(10),AAGD02004563.1:1..36636,gap(589),AAGD02004564.1:1..10756, gap(10),AAGD02004565.1:1..18111,gap(272),AAGD02004566.1:1..11825, gap(10),AAGD02004567.1:1..7669,gap(10),AAGD02004568.1:1..25041, gap(160),AAGD02004569.1:1..3015,gap(10),AAGD02004570.1:1..20445, gap(529),AAGD02004571.1:1..2557,gap(10),AAGD02004572.1:1..42830, gap(10),AAGD02004573.1:1..4158,gap(10),AAGD02004574.1:1..30506, gap(3668),AAGD02004575.1:1..14596,gap(10),AAGD02004576.1:1..28484, gap(10),AAGD02004577.1:1..43990,gap(10),AAGD02004578.1:1..23514, gap(10),AAGD02004579.1:1..10893,gap(10),AAGD02004580.1:1..1332, gap(264),AAGD02004581.1:1..4555,gap(489),AAGD02004582.1:1..3529, gap(10),AAGD02004583.1:1..6669,gap(10),AAGD02004584.1:1..23522, gap(10),AAGD02004585.1:1..12196,gap(753),AAGD02004586.1:1..4900, gap(10),AAGD02004587.1:1..3522,gap(81),AAGD02004588.1:1..19754, gap(10),AAGD02004589.1:1..2940,gap(10),AAGD02004590.1:1..31553, gap(10),AAGD02004591.1:1..1380,gap(10),AAGD02004592.1:1..2094, gap(10),AAGD02004593.1:1..6399,gap(339),AAGD02004594.1:1..23970, gap(10),AAGD02004595.1:1..6991,gap(10),AAGD02004596.1:1..620, gap(10),AAGD02004597.1:1..1750,gap(10),AAGD02004598.1:1..12323, gap(10),AAGD02004599.1:1..9234,gap(10),AAGD02004600.1:1..28287, gap(434),AAGD02004601.1:1..5791,gap(10),AAGD02004602.1:1..16379, gap(10),AAGD02004603.1:1..15402,gap(10),AAGD02004604.1:1..12182, gap(10),AAGD02004605.1:1..4177,gap(10),AAGD02004606.1:1..324, gap(10),AAGD02004607.1:1..4858,gap(10),AAGD02004608.1:1..679, gap(416),AAGD02004609.1:1..10331,gap(366),AAGD02004610.1:1..1766, gap(490),AAGD02004611.1:1..5169,gap(333),AAGD02004612.1:1..14400, gap(10),AAGD02004613.1:1..8712,gap(286),AAGD02004614.1:1..19810, gap(310),AAGD02004615.1:1..5389,gap(10),AAGD02004616.1:1..2017, gap(83),AAGD02004617.1:1..7577,gap(575),AAGD02004618.1:1..7551, gap(163),AAGD02004619.1:1..6581,gap(10),AAGD02004620.1:1..863, gap(10),AAGD02004621.1:1..22743) //