LOCUS DS268419 1447888 bp DNA linear CON 11-OCT-2010 DEFINITION Caenorhabditis remanei Scfld02_12 genomic scaffold, whole genome shotgun sequence. ACCESSION DS268419 AAGD02000000 VERSION DS268419.1 DBLINK BioProject: PRJNA12588 BioSample: SAMN00627085 KEYWORDS WGS. SOURCE Caenorhabditis remanei ORGANISM Caenorhabditis remanei Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1447888) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE PCAP assembly of the Caenorhabditis remanei genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 1447888) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (17-JUL-2007) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA COMMENT The organism is Caenorhabditis remanei Sudhaus, 1974; strain PB4641. This strain is derived from the wild isolate EM464. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain EM464 was established with individuals collected from a pillbug (Armadillidium vulgare) in Brooklyn, New York, NY, USA in June 1990 by Scott Baird. EM464 was described as /Caenorhabditis vulgaris/Baird, Fitch & Emmons, 1994, which was later shown to be a junior synonym of C. remanei (Sudhaus & Kiontke 1996). Annotation was added to the scaffolds in October 2010. FEATURES Location/Qualifiers source 1..1447888 /organism="Caenorhabditis remanei" /mol_type="genomic DNA" /strain="PB4641" /db_xref="taxon:31234" gene <67..>816 /locus_tag="CRE_04495" /db_xref="WormBase:WBGene00078755" mRNA join(<67..675,724..>816) /locus_tag="CRE_04495" /product="hypothetical protein" /db_xref="WormBase:CRE04495" /db_xref="WormBase:WBGene00078755" CDS join(67..675,724..816) /locus_tag="CRE_04495" /note="contains similarity to Homo sapiens Putative protein TPRXL; ENSEMBL:ENSP00000322097" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86858.1" /db_xref="WormBase:CRE04495" /db_xref="WormBase:WBGene00078755" /translation="MFISLKQPRWDAPNSFLYFRFCGIRSLCFLDRPTDSFPSSVISN SQLIIQVIKSQSNCIFQILEQQRVNEQQRAHAQSDPLPPLPPISNLPVPSSPNLKKPL NNNNNPFIGDTSIPSSSTSSSPSHVTKITVGTIGGGVESTSPSTSSYIPRPVVSGSSS FSHPPPLPAHQSSSKIPRMSSASEARKNSQPPQPAVRMQHNFEDSRKFSQNGCAPPSR IVPPMQHQRRIVTDF" gene <1395..>3700 /locus_tag="CRE_04496" /db_xref="WormBase:WBGene00055526" mRNA join(<1395..1397,1442..1548,1596..1713,1758..2021, 2064..2223,2268..2527,2587..2721,2766..2951,2996..3608, 3654..>3700) /locus_tag="CRE_04496" /product="hypothetical protein" /db_xref="WormBase:CRE04496" /db_xref="WormBase:WBGene00055526" CDS join(1395..1397,1442..1548,1596..1713,1758..2021, 2064..2223,2268..2527,2587..2721,2766..2951,2996..3608, 3654..3700) /locus_tag="CRE_04496" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86581.1" /db_xref="WormBase:CRE04496" /db_xref="WormBase:WBGene00055526" /translation="MSIITQDALKSVTEQLSPTSRLNLAAIDQQFFSVSTKWHDVKTI LFDEDEVTMAGANFVHTFENLAFRKNGVDGNRSFYKADAKETALKLCPGRKKLIIQTK LSDYDAVMLNKMNLKLTKLYISTENLSLVNFPKFEKLKTLHLVFNSTKELKVVDVVEQ RVLKTVFPQTLTRICLTGIYLTENLLTHMATLNNLSCLDTIGCLIDTRVGAKYIPLLE TYPSLDELSLPPSLFSFSIKTKTQTELSFQKLTVTKIGLYMDQFDDDVFYSQCRHFLP KNLKVLVVFGNYLPLKKWKLLSSINNFMILFGPNISLASCPQANLTNVKLLSHLVRSP PYIQLERNPNFLRNHDMSVGNLEWQFSLIEWKDHNLCRKEVLALRKQMNATGEEEVVF EGVRIPAPVIMQRLGQFRGRRMMMPHSPNDFQVFDGPIPMAPPLPARHPIVHPPRHPQ NILHTVQPQHRRRSNRNRPDTPVPRRASRRRTRSAPPAIEDVPRQQPRQSDSMRTHPP SPPVGTQTGAVFNATLPNISPIRTTTASDVTRASASVSTATNGMSVLNRGFMATPNSD TSNTATVGSRRLSTESQVSSVLPSEMTVQSVSTASPERISQIRGNESQMTPPPPANQQ NQPPSS" gene <6387..>7790 /gene="Cre-mlp-1" /locus_tag="CRE_04497" /db_xref="WormBase:WBGene00055528" mRNA join(<6387..6501,6623..6717,6833..6944,7071..7239, 7733..>7790) /gene="Cre-mlp-1" /locus_tag="CRE_04497" /product="CRE-MLP-1 protein" /db_xref="WormBase:WBGene00055528" CDS join(6387..6501,6623..6717,6833..6944,7071..7239, 7733..7790) /gene="Cre-mlp-1" /locus_tag="CRE_04497" /note="contains similarity to Pfam domain PF00412 LIM domain; contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)" /codon_start=1 /product="CRE-MLP-1 protein" /protein_id="EFO86653.1" /db_xref="InterPro:IPR001781" /db_xref="PFAM:PF00412" /db_xref="WormBase:CRE04497" /db_xref="WormBase:WBGene00055528" /translation="MPFKPVEHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCSMCNKL LDSMSCCEHQAQLFCKQCHCRRYGPKGVGFGIGAGSLTMDTGEQFGNTEVDMTLVSKR FHVQCYMCNKLLDSCTVAPHEAELYCKQCHGRKFGPKGVGFGLGAGCLTTDSGEKFGG SKQTNRPMTAEAFTAPINPSHS" gene complement(<8151..>13016) /gene="Cre-dct-6" /locus_tag="CRE_04684" /db_xref="WormBase:WBGene00055530" mRNA complement(join(<8151..8321,8580..8695,8740..9028, 9075..9325,10173..10518,10563..10650,10901..11023, 11221..11723,11806..12151,12200..12297,12346..12632, 12809..12897,12976..>13016)) /gene="Cre-dct-6" /locus_tag="CRE_04684" /product="CRE-DCT-6 protein" /db_xref="WormBase:WBGene00055530" CDS complement(join(8151..8321,8580..8695,8740..9028, 9075..9325,10173..10518,10563..10650,10901..11023, 11221..11723,11806..12151,12200..12297,12346..12632, 12809..12897,12976..13016)) /gene="Cre-dct-6" /locus_tag="CRE_04684" /codon_start=1 /product="CRE-DCT-6 protein" /protein_id="EFO86745.1" /db_xref="WormBase:CRE04684" /db_xref="WormBase:WBGene00055530" /translation="MIESTTSHQDFQQRSMTGYALEHPSYRVRGALFRHQDDGRLLSG CGGDIEVIHALEMERSQHTGLPVRVTNVVVFGSNDVVRLIQPIEGTEDVIVNGDYHVS IVQSVELFESSTVSKSRILKLPGKIVAVNAEKHSNTELLLVFLLETGLYHYSFCAQTS EHFQCIQAFRCNRPITSGLLWRDSGLLHVAYYDGFVRVGVVHEQYDDMLLVKRVAVNR NNLAVLLDVVFEEIGRIQKFEDTEKQRRDDMLTTSKSLSEKLVTEEEVVEGDTTNDDF AKLKFEFKNQSIRCERVSTRLTSLRKLISIIKSALDMNDQIEQMIALLVDQLGELEKL EQLCEEVQKTGNQNLIGKSWIAVEEKRMVVDELIAKVNSDQIKKHSDEWDQKIDQIID QLNGCSEVAKDMRMILSQNIFEHRGDKKDVFTHFILDSQSRDITLYCLSGLTTLAIYP RKGKRVASISLDASFATCLTSACAMKSVEGVYVADQNAVFPIYFYREKRYLDAGNQLQ IPAFDSISSILIEPHQMILGSVTGGLLHLSFDFASNFEHFIIASSMLAHPISSGAVNC IKLLATGESLLALHCTDAEVVVSEKDQDRWHRVTHHTGGAHSIAVTPFSVDERGAFAV VASDTFVRLKALQYAEESLIGLHDLGESRAEDENGHPIEVLNVSLDPSMQYRQLPCKL RYAVGFSDKAIRTYVALLTGQHDFTVTEKFIAQIEPLFNVQNMICFHGRPMGCYVSCA KTLQIWNDLDRHQQKKLKSERMQLVKLSSSVTSMERTDGFLLVGFADDRLSIYEEKGN GSVELVGTVEEWHKGLCDRSVLGLRTRASKTSCGTRLFIHSLTGHHIVIHTVLVQASK IEQHDFIVAHEHSMSQPIGFEFVSYKYFEFLVYGRGISNEKLSVEDRKRMDCFRDFEF N" gap 9774..9783 /estimated_length=10 gene complement(<18086..>18502) /locus_tag="CRE_04685" /db_xref="WormBase:WBGene00055531" mRNA complement(<18086..>18502) /locus_tag="CRE_04685" /product="hypothetical protein" /db_xref="WormBase:CRE04685" /db_xref="WormBase:WBGene00055531" CDS complement(18086..18502) /locus_tag="CRE_04685" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86663.1" /db_xref="WormBase:CRE04685" /db_xref="WormBase:WBGene00055531" /translation="MPQAIKLSGDTTYQVVAPSTLNLHSIFPGIPVQLHILIEDMINR SFEISLRIFIFLSLFFLLCRNDKKRKHRCCGAAKSTTFLSFGHSSPLFIHLLIHNLIS FPRGNILRTRYANLADISKSALRREEREKDERQNVI" gene complement(<18855..>21549) /locus_tag="CRE_04686" /db_xref="WormBase:WBGene00055532" mRNA complement(join(<18855..19432,19476..19566,19618..19748, 19794..20304,20346..20528,20573..21346,21402..21467, 21514..>21549)) /locus_tag="CRE_04686" /product="hypothetical protein" /db_xref="WormBase:CRE04686" /db_xref="WormBase:WBGene00055532" CDS complement(join(18855..19432,19476..19566,19618..19748, 19794..20304,20346..20528,20573..21346,21402..21467, 21514..21549)) /locus_tag="CRE_04686" /note="contains similarity to Pediococcus pentosaceus Subtilisin-like serine protease.; TR:Q03I02; coded for by the following C. remanei cDNAs: DY525897, DY524747" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86587.1" /db_xref="WormBase:CRE04686" /db_xref="WormBase:WBGene00055532" /translation="MSVPKKRKSDVHIDSCARDDSDHQTKKDKHWFEEAEQNGENRRG SIFKGIFKKMKSSASLKSSNKGTSSSKLETLANETQLSINSESSVTSVESGPSSLVPN IAKNAVLRTFVNRESFTPVPPSNEVEPTDPFLLPTVGGSKQESTSRMEDSISVRSVAE MVNLHSCTSQISSHMSVDTIGSNHTIDEDSVSIGSASAFCTPSRNSLQRNGLRASSRS VSGIDGDDDMPPALFRSLCNSAVRRVPNSKLLENGNNQMRRSMRMTIQKRNLSTKSME DVPEEEEATGVISTAVIRMSAPIAEEECEEQFGGAKEFFDSNITSHDESADEGTASIS RLSTASESRASTGGTSLVRGRKSSIFRKFFNGKDKERRLSEVFHNAEPSTSTERRGSI LSFTNDCSFAGGMPSASVSASVGNVSISSVASSESVQKPKMRKKNPSTSNLTQRLSSV FRRSSSTANKDDDFFCPSTQSTRRNTLTGYSSISSGIGSIASGVSDQGYGTIGSRNGH SISRNGSKRDDENKRERSRRLIDRIIISDIPASDLLKIKLEQIRRKDRDDSDEMFETQ MKGSTSLNSFSQSEYLNFDVVAVDLKHDGTPFSSTAASYVDEKIIKMVKEDMHSNFRP DRCGSVTDCEPNLVYVQPEHPQILRGPNDSIASNSDPSSELLRNVRNGLHNSIEEWKK ISSTRESSTMLIYPTFCQSEEEWDSQATIDAIFMMLDSILQNVRRWRPNGKCILAGLT PSNVSLLREKYDKLKESVEQTERDGPGSSFEDVDIQSISSTSTVFGKHM" gene <22673..>26902 /gene="Cre-psf-1" /locus_tag="CRE_04498" /db_xref="WormBase:WBGene00055533" mRNA join(<22673..22767,22816..23176,24135..24436,24802..24897, 25239..25435,26284..26748,26802..>26902) /gene="Cre-psf-1" /locus_tag="CRE_04498" /product="CRE-PSF-1 protein" /db_xref="WormBase:WBGene00055533" CDS join(22673..22767,22816..23176,24135..24436,24802..24897, 25239..25435,26284..26748,26802..26902) /gene="Cre-psf-1" /locus_tag="CRE_04498" /note="contains similarity to Pfam domains PF08075 (NOPS (NUC059) domain), PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)) (2)contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR012975 (NOPS), IPR000504 (RNA recognition motif, RNP-1); coded for by the following C. remanei cDNAs: DT935810" /codon_start=1 /product="CRE-PSF-1 protein" /protein_id="EFO86811.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR012975" /db_xref="PFAM:PF00076" /db_xref="PFAM:PF08075" /db_xref="WormBase:CRE04498" /db_xref="WormBase:WBGene00055533" /translation="MSGRRDNRRSNGHDEREDRKQPRDLRGGGGDKRSGGSARTGGGG GGSRGGAERGIAPAQQPYESSGGHRSGGGGGGAGGGGRGGGTAFNGAAFTESQLMDEV PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAES AKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVD EKGRPTGEGIVEFERKPNCNEAMAAIREKVFLLTASPKPLICEVLEPRDEDDGLAERM IPRTPGLSKERELGPRFPTQNSFEYVYGMKWKELYDVEKKRRAALDEELRESRRRLES DMELAYQDYQAQMLREDLQRRQQELERLEAARRERMRGLGGPPGGMPGGMPGGMPGGM PPQVQPFHPQGGFMSGGPGGPPGGPGGPPPFQQQFQQPQQGMFNVPTGVPPPLMGGGG DMRGPPGGGHGGPPQGGPGGPRGMLQGPHGTSNMIEGVQRLLQIFKSDNGPPGGMSGG RDFPQQGPGGMFGGGPYGDGGYPPEKKQRR" gap 27023..31536 /estimated_length=4514 gene complement(<31960..>35957) /locus_tag="CRE_04687" /db_xref="WormBase:WBGene00055535" mRNA complement(join(<31960..32076,32131..33062,35873..>35957)) /locus_tag="CRE_04687" /product="hypothetical protein" /db_xref="WormBase:CRE04687" /db_xref="WormBase:WBGene00055535" CDS complement(join(31960..32076,32131..33062,35873..35957)) /locus_tag="CRE_04687" /note="contains similarity to Pfam domain PF05822 Pyrimidine 5'-nucleotidase (UMPH-1); contains similarity to Interpro domain IPR006434 (HAD-superfamily hydrolase, subfamily IE); coded for by the following C. remanei cDNAs: DY528573, DR409196, DR775960, DR779116, DT936850" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86866.1" /db_xref="InterPro:IPR006434" /db_xref="PFAM:PF05822" /db_xref="WormBase:CRE04687" /db_xref="WormBase:WBGene00055535" /translation="MSRVARLGRCLFVNGRRFESRQSTLQMQAETLADSPLSTSLEPP QFSMFKATEIAAAAAACAEAECYEQLEQLKKTEVVPLLMEWFVQQQQIICANPTEVAA KLRKMVAGGARKTVVISDFDYTLSRFANEKGERLSTTHGVFDDNVMRLNPALGQQFVD LKNKYYPIEFCPILTQEEKIPHMEKWWGTSHSLIVNEKFSKNTIEDFVRQSRIVFKDG AEDFIQSLDAHNIPLVIFSAGIGNIIEYFLEQKLGAIPRNTHFISNMILFDEEEKACA FSEPLIHTFCKNSSVIQKETSFFHEINGRVNVILLGDSMGDIHMDVGVERDGPTLKVG YYNGSLDDTAALKHYEEVYDIVLIHDPTLDVAQKIVDMINSTH" gene <36683..>38513 /locus_tag="CRE_04499" /db_xref="WormBase:WBGene00078747" mRNA join(<36683..37507,37680..>38513) /locus_tag="CRE_04499" /product="hypothetical protein" /db_xref="WormBase:CRE04499" /db_xref="WormBase:WBGene00078747" CDS join(36683..37507,37680..38513) /locus_tag="CRE_04499" /note="contains similarity to Pfam domain PF02875 Mur ligase family, glutamate ligase domain; contains similarity to Interpro domains IPR004101 (Mur ligase, C-terminal), IPR013221 (Mur ligase, central), IPR001645 (Folylpolyglutamate synthetase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86755.1" /db_xref="InterPro:IPR001645" /db_xref="InterPro:IPR004101" /db_xref="InterPro:IPR013221" /db_xref="PFAM:PF02875" /db_xref="WormBase:CRE04499" /db_xref="WormBase:WBGene00078747" /translation="MMRSFPQTNRLLRPSTYPIACCVNQFRMTSGSATSSSVSRYEES VRLLNSLQSNAATIKKLREQRENLQAMNLPQCRKYLESLKVSEKNLESLNIIHVSGTK GKGSTCAYTEAILRKQGLKTGLYTSPHLVHVRERIRINGEPVDEKTFAEEFFHGEVRD FRNGLQRIILFSVYDIISQEHSENMPAYFKFLTLLAFRIFIKLGVQVVILEVGIGGEY DCTNVIEHPKVCGVTTLDYDHISILGSKLSEIAWHKAGIFKKDVPAIYSPTNPEAEEV LISRAKSKSTPLAEAPPVSAYHFSRPISPGIRGLHQFSNISLSFQLVKTWAEKCHFPL PGVSLSTKIGKGFDIPSWMCDAIESCRWPGRSQVISTDKKITYLLDGAHTPKSMEACA EWASEEITLLKKENVKKIVLFQCTADRCPSTLIQYLKVRFQKKTSKKFHFQPLGIDQI VSCPTQLYSSVDKSADSTNLNASRDEQMEKALQCVESWKESMDDPNRITKDKMKVFDC ISAAFDYIETESSSQEILVLVTGSLHLVGGVLNLISTKTHQTVI" gene <38803..>40813 /locus_tag="CRE_04500" /db_xref="WormBase:WBGene00055536" mRNA join(<38803..39379,39430..39574,39626..39871,39917..40028, 40072..40225,40268..40398,40446..40595,40643..>40813) /locus_tag="CRE_04500" /product="hypothetical protein" /db_xref="WormBase:CRE04500" /db_xref="WormBase:WBGene00055536" CDS join(38803..39379,39430..39574,39626..39871,39917..40028, 40072..40225,40268..40398,40446..40595,40643..40813) /locus_tag="CRE_04500" /note="contains similarity to Pfam domains PF00919 (Uncharacterized protein family UPF0004), PF04055 (Radical SAM superfamily), PF01938 (TRAM domain); contains similarity to Interpro domains IPR005839 (Protein of unknown function UPF0004), IPR013848 (Protein of unknown function UPF0004, N-terminal), IPR007197 (Radical SAM), IPR006638 (Elongator protein 3/MiaB/NifB), IPR002792 (Deoxyribonuclease/rho motif-related TRAM); coded for by the following C. remanei cDNAs: DY525030" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86567.1" /db_xref="InterPro:IPR002792" /db_xref="InterPro:IPR005839" /db_xref="InterPro:IPR006638" /db_xref="InterPro:IPR007197" /db_xref="InterPro:IPR013848" /db_xref="PFAM:PF00919" /db_xref="PFAM:PF01938" /db_xref="PFAM:PF04055" /db_xref="PFAM:UPF0004" /db_xref="PFAM:UPF0004)" /db_xref="WormBase:CRE04500" /db_xref="WormBase:WBGene00055536" /translation="MLRQWWLRGVGACSTFTRAHSGCSTSSSMKPKRAIPSDGLQLSD FIREGTKKQRQKAIIPSIEDTKEYLSPEDLNGNGKTVCYVTYGCQMNVSDMEIVRSIM SQYGFVESDQKEKADIVLLMTCSIRDGAEKKVWNQLKLIRSNSVNKRQIVGVLGLFSV LMNAKISYLTGCMAERVRHDLLEKRNLVNIVAGPDSYRDLPRLVAVASGGSNAINVQL SLDETYAEVQPIRVDAESRTAFISIMRGCDNMCTYCVVPFTRGRERSRPIDSIVEEVR RLRDQGYKQITLLGQNVNSYRDMTSMDFPMNPSTTEDRVPGFKTVYKPKSGGLTFTSL LEKVADAAPDVRFRFTSPHPKDFPMQLIELIASRTNLCKQLHLPAQSGDDETLDRMGR GYSRDLYLRLVDDIRIILPNVSLTSDFIAGFCGETEEAHQNTLSLIREVGYSFCFVFP YSMRGKTRAHHRLTDDVPENVKARRHLDLTTVFREEAMKLNQKLIGTEQTVLLEGKSK RDVAFSHGRTDGGVKAVFDNSKSQLNPGQYAKVLITEANSQTLKAEFIRETDL" gene complement(<41004..>43933) /gene="Cre-ubq-1" /locus_tag="CRE_04688" /db_xref="WormBase:WBGene00055538" mRNA complement(join(<41004..41557,41604..42059,42087..43016, 43064..43291,43339..>43933)) /gene="Cre-ubq-1" /locus_tag="CRE_04688" /product="CRE-UBQ-1 protein" /db_xref="WormBase:WBGene00055538" CDS complement(join(41004..41557,41604..42059,42087..43016, 43064..43291,43339..43933)) /gene="Cre-ubq-1" /locus_tag="CRE_04688" /note="contains similarity to Pfam domain PF00240 Ubiquitin family; contains similarity to Interpro domain IPR000626 (Ubiquitin); coded for by the following C. remanei cDNAs: DY529104, DY524658, DY527229, DT937033, DQ115333, DY528036, DY529579, DR780117, DY527137, DY526236, DR776024, DR406842, DR776003, DT934717, DY529411, DR779446, DY525910, DT934165" /codon_start=1 /product="CRE-UBQ-1 protein" /protein_id="EFO86690.1" /db_xref="InterPro:IPR000626" /db_xref="PFAM:PF00240" /db_xref="WormBase:CRE04688" /db_xref="WormBase:WBGene00055538" /translation="MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE GIPPDQQRLIFAGKNNCERKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR LRGGDM" gene <47492..>48742 /locus_tag="CRE_04501" /db_xref="WormBase:WBGene00055540" mRNA join(<47492..48373,48422..>48742) /locus_tag="CRE_04501" /product="hypothetical protein" /db_xref="WormBase:CRE04501" /db_xref="WormBase:WBGene00055540" CDS join(47492..48373,48422..48742) /locus_tag="CRE_04501" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86610.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04501" /db_xref="WormBase:WBGene00055540" /translation="MMSSDEADDVLPREEEMLKTKKDKYKVIALLGKGGYGAVYSVLR QSDSEKFAIKCEKATAAKKVLLMDCNVMKGATQIKSRHFCAVLDRANVKDRFNFIVMK LIGKNLWDLRQDRPDGRFSLGTALKTAAQCLVSIEHLHSVRLDIRISTKSPSIFQFGY LHRDIKPGNFAAGRKESNEHHTIFMLDFGLCREFVKRAEGKDMRAPRSSAPFRGTTRY APLAAMLQQDQSRKDDIESWLYMVVEWTSGGLPWRKLKAHDRDKVLAYKKDVREKADI LEDFLYNCPKKEFTRILKYVDTLGYYAVPDYGFIYYCVKHAAVANKIKDNDPIDWDPE RPYFGPLETPGDGKVIDLEVEGGQSVKEFSKRNPKEKDQSDETRKGKKKAGASPNREK TEVKEVKK" gene <49372..>50488 /locus_tag="CRE_04502" /db_xref="WormBase:WBGene00055541" mRNA join(<49372..49565,49620..49743,49784..49882,49929..50018, 50065..50289,50336..>50488) /locus_tag="CRE_04502" /product="hypothetical protein" /db_xref="WormBase:CRE04502" /db_xref="WormBase:WBGene00055541" CDS join(49372..49565,49620..49743,49784..49882,49929..50018, 50065..50289,50336..50488) /locus_tag="CRE_04502" /note="contains similarity to Trichomonas vaginalis G3 Putative uncharacterized protein.; TR:A2ENS5" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86803.1" /db_xref="WormBase:CRE04502" /db_xref="WormBase:WBGene00055541" /translation="MPNRVKYYEKLREKRRLARERAKKVQEERKRAREVKEEKWTTRN EFGLVSEHRQIQRKAYIEKIRKESQEMLKMAIERVNSHGKREGIIQKEIEEEVETVKN FIDEQCNYYAEIHEQISPPKERSVDQIVTEIEEGLKEIYDIFASVFDFDPKMPEDIEV KEDDDQIFAKEIAQLEKEFEANTLKAENIEKEIAQSKVQIETENVKFAAIEQEKAIEI IKLEKQIKNMEAKLDFIKQDPVEVEEIEKLRKRVEEETQRNVEYSESLKYIKEMIRIK KEEKEEKKKQKLEELERK" gene <53311..>57345 /gene="Cre-zmp-1" /locus_tag="CRE_04503" /db_xref="WormBase:WBGene00055542" mRNA join(<53311..53379,53430..53617,53668..53733,56563..56710, 56756..56891,56936..57279,57328..>57345) /gene="Cre-zmp-1" /locus_tag="CRE_04503" /product="CRE-ZMP-1 protein" /db_xref="WormBase:WBGene00055542" CDS join(53311..53379,53430..53617,53668..53733,56563..56710, 56756..56891,56936..57279,57328..57345) /gene="Cre-zmp-1" /locus_tag="CRE_04503" /note="contains similarity to Pfam domains PF01471 (Putative peptidoglycan binding domain), PF00413 (Matrixin); contains similarity to Interpro domains IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR006026 (Peptidase, metallopeptidases), IPR001818 (Peptidase M10A and M12B, matrixin and adamalysin), IPR002477 (Peptidoglycan binding-like)" /codon_start=1 /product="CRE-ZMP-1 protein" /protein_id="EFO86674.1" /db_xref="InterPro:IPR001818" /db_xref="InterPro:IPR002477" /db_xref="InterPro:IPR006025" /db_xref="InterPro:IPR006026" /db_xref="PFAM:PF00413" /db_xref="PFAM:PF01471" /db_xref="WormBase:CRE04503" /db_xref="WormBase:WBGene00055542" /translation="MFHDILILFLAFIPSVFARNVDHTEFLQKYGYLPRGSNQVSSES LSEALKNMQRMAGLEETGELDERTKRMMERPRCGHPDVHEEKSSRGKRNTPPIFKWQD KTITYGCKSAGTSTRISLDDLRRTMHQAASQWSELADVEIVESSVENPMIQITAGRAM HYPCRVSFDRQTLAHAFFPPHGQIHINDNVNFVMTNYTERIGGNSLYSVVAHEMGHAL GFSHSSDSESIMFAYDTPRKWKFTSNDKYWMRKYYGRKKSSTRSKEEDSREERERDDR RKYEKEKTREREHEKDDIRPDECRVENPIVVQYRGEYLVFKIILGR" gene complement(<57663..>59120) /locus_tag="CRE_04689" /db_xref="WormBase:WBGene00055543" mRNA complement(join(<57663..57747,57798..58042,58090..58633, 58678..>59120)) /locus_tag="CRE_04689" /product="hypothetical protein" /db_xref="WormBase:CRE04689" /db_xref="WormBase:WBGene00055543" CDS complement(join(57663..57747,57798..58042,58090..58633, 58678..59120)) /locus_tag="CRE_04689" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86766.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04689" /db_xref="WormBase:WBGene00055543" /translation="MSCEKKDDDKKEDKSKSKRKEEKKEEKKEEKKDLEKSKRKEKEE KKDVDKSKRKEKEEKKDAEKSKRKEKEKEEKKEEEKKEEKKEEKKEEKKDEKKEEQKK EEKKKRAGAVYNQMNNKNLIGEGSTVLGRFEVDVIIGGGGFAQIYKAYDKLRKEDCAI KMENSALDIRRMKLEITVLLALRGQMGIPEILGQGKWQHGDIKSQYIVMQLVGKNLSE VRKLLPHRRFSDRTLYRAMLQVLKALSLLHGAGFLHRDLKPSNCCIGANDCTRIYLID YGLTRQYLDKGGIVRKPRAGVGLRGTVRYMSLDAHARHDLGPNNDLVSFLYTTIECGD GSLPWSNESTHENIIKLKQAHTGEKLCTKQPAMTKVAEYIESLSYHNIPDYEKLFGLV DDCNPPDLLPSEPYDWQYRPVHNPMTPTPNDTPGGTKENATERMNV" gene <59499..>59992 /locus_tag="CRE_04504" /db_xref="WormBase:WBGene00078729" mRNA join(<59499..59581,59626..>59992) /locus_tag="CRE_04504" /product="hypothetical protein" /db_xref="WormBase:CRE04504" /db_xref="WormBase:WBGene00078729" CDS join(59499..59581,59626..59992) /locus_tag="CRE_04504" /note="contains similarity to Pfam domain PF00045 Hemopexin; contains similarity to Interpro domain IPR000585 (Hemopexin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86588.1" /db_xref="InterPro:IPR000585" /db_xref="PFAM:PF00045" /db_xref="WormBase:CRE04504" /db_xref="WormBase:WBGene00078729" /translation="MAHAPLTLSNIGINEKYIDLAYEWHYFNPPAIYIWKGSRYWKLD EKMDHRRVDERYPKPIDLNWGRVPKGVNSAFTYQKEIHFIRRDQVYRMNSSRSVFDVA DGYPQPFSSFFAFCPRNEKLTLNSSHYSKNYFSAVVLLTITILTFYF" gene complement(<60202..>60728) /locus_tag="CRE_04690" /db_xref="WormBase:WBGene00055544" mRNA complement(join(<60202..60525,60663..>60728)) /locus_tag="CRE_04690" /product="hypothetical protein" /db_xref="WormBase:CRE04690" /db_xref="WormBase:WBGene00055544" CDS complement(join(60202..60525,60663..60728)) /locus_tag="CRE_04690" /note="contains similarity to Pfam domain PF04714 BCL7, N-terminal conserver region; contains similarity to Interpro domain IPR006804 (BCL7, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86875.1" /db_xref="InterPro:IPR006804" /db_xref="PFAM:PF04714" /db_xref="WormBase:CRE04690" /db_xref="WormBase:WBGene00055544" /translation="MYSANRSHRAETRNRSKDELRKVKSIIVLIETFVLAVSAQNIMA PPKPQLKEIDEESNQIPSAENSQDSTSVTQPAVNFDINEDSNFSTGDNFDSDSNQTFE PQNYQGGATGSTDFSSMRDAEMTPKQP" gene <61088..>62274 /gene="Cre-dnc-2" /locus_tag="CRE_04505" /db_xref="WormBase:WBGene00055545" mRNA join(<61088..61195,61240..61306,61356..61770,61820..62147, 62197..>62274) /gene="Cre-dnc-2" /locus_tag="CRE_04505" /product="CRE-DNC-2 protein" /db_xref="WormBase:WBGene00055545" CDS join(61088..61195,61240..61306,61356..61770,61820..62147, 62197..62274) /gene="Cre-dnc-2" /locus_tag="CRE_04505" /note="contains similarity to Pfam domain PF04912 Dynamitin; contains similarity to Interpro domain IPR006996 (Dynamitin); coded for by the following C. remanei cDNAs: DY525151, DY526196, DR775775, DR778457" /codon_start=1 /product="CRE-DNC-2 protein" /protein_id="EFO86532.1" /db_xref="InterPro:IPR006996" /db_xref="PFAM:PF04912" /db_xref="WormBase:CRE04505" /db_xref="WormBase:WBGene00055545" /translation="MSTIGKEDIYESDGASSQVQNTQPENDAPNHPDIELVSVDIDEA LKKYKNRVLNLTSIDYSDSIAKKRRHAFGNNQYVLEVAGAGFAGTETAAEKLNRILYE IADLNEQLRTDENVKTDLLNAEVLENLEKEVKTLQGVQANGKPARVEHEVELPKVRSD SKVATLENRLRRIEQVIGSSVIPSAPVLDTIEDLKLRCETLNQSYVSGLEQRLNVMLT KLEKIDETRANNDIDENLDKKVNEILELMQKWDVACSSLPSNVNKVKALNRLHEQAQH FAGGLSHLKTIREKLEKEVAQGREAIIEYETNGKQEIGSVVEKLKILEAKVAELK" gene complement(<62403..>62988) /locus_tag="CRE_04691" /db_xref="WormBase:WBGene00055546" mRNA complement(join(<62403..62456,62504..62872,62920..>62988)) /locus_tag="CRE_04691" /product="hypothetical protein" /db_xref="WormBase:CRE04691" /db_xref="WormBase:WBGene00055546" CDS complement(join(62403..62456,62504..62872,62920..62988)) /locus_tag="CRE_04691" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86607.1" /db_xref="WormBase:CRE04691" /db_xref="WormBase:WBGene00055546" /translation="MKKILGLFIFLICILYVDNAATSSIISDPRSMFPKVMRTKSAFH FIHFFMGTFRQMFRNKTQVIDHFNYYDDQVKGNDCYIQGGLDFTRLKDYFEKYAKTHH DPKISVIFAVMTKDAIHMTAEFHVSSQTWLGFEDHFHMLIRAVNDDAVGWGVRYLSMA FNC" gene <65474..>67800 /locus_tag="CRE_04506" /db_xref="WormBase:WBGene00055547" mRNA join(<65474..65605,66148..66306,66354..66572,66623..66832, 67154..67268,67318..67455,67562..>67800) /locus_tag="CRE_04506" /product="hypothetical protein" /db_xref="WormBase:CRE04506" /db_xref="WormBase:WBGene00055547" CDS join(65474..65605,66148..66306,66354..66572,66623..66832, 67154..67268,67318..67455,67562..67800) /locus_tag="CRE_04506" /note="contains similarity to Pfam domain PF03301 Tryptophan 2,3-dioxygenase; contains similarity to Interpro domain IPR004981 (Tryptophan 2,3-dioxygenase); coded for by the following C. remanei cDNAs: DT933729, DR781725" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86768.1" /db_xref="InterPro:IPR004981" /db_xref="PFAM:PF03301" /db_xref="WormBase:CRE04506" /db_xref="WormBase:WBGene00055547" /translation="MACPYMGGGELTHRVTFMEGGEESQQGVNKVEMGFGQTYPEYLQ LDKILTAQKLKSEADGQRVDDEHLFIVIHQAHELWFKQIIFDLDIVRKLLNNTIVDET KTLKIVSGLDRIVKILSLLTEQITLLDTMSPLDFVDFRKYLTPASGFQSLQFRVLENK LGVKQERRIKYNAQHYKNVFNDEDLKALNTTEEEKSLLTLIESWLERTPGLKSTSEDE GFWIKYENSVNRYLSDLAKQAADPSNTEEISRQLTAEYHKTSDAFQSILDPRQHEQHI RNGNRLLSHDATKGAMMIYFYRDMPRFSQPYQILTFLMDIDSLFTKWRYNHVLLVQRM LGAKQGTGGSSGYMYLRSTVSDRYKVFLDLFNLSTWLIPREYIPMLSPRMVKTLSEHS NLSHSQSSESE" gene complement(<70589..>76240) /locus_tag="CRE_04692" /db_xref="WormBase:WBGene00055548" mRNA complement(join(<70589..70726,70792..71058,71103..71745, 71793..72731,72778..73176,73232..73455,73505..74851, 74900..75342,75385..76095,76210..>76240)) /locus_tag="CRE_04692" /product="hypothetical protein" /db_xref="WormBase:CRE04692" /db_xref="WormBase:WBGene00055548" CDS complement(join(70589..70726,70792..71058,71103..71745, 71793..72731,72778..73176,73232..73455,73505..74851, 74900..75342,75385..76095,76210..76240)) /locus_tag="CRE_04692" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain); contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal); coded for by the following C. remanei cDNAs: DR406378, DT935295, DT934767" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86622.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00270" /db_xref="PFAM:PF00271" /db_xref="WormBase:CRE04692" /db_xref="WormBase:WBGene00055548" /translation="MSANANWDDSDSENENVVVEEKPVILPRARQPSIAKSLEKVQIL ENSVAGSEKNASDDDSDASSIMSDDLESLGEATEVLEFSLEQLSSMKKNLAQFPCSYK NIISEFADVEIFLISIDSLVVECAAHSYHNWDVAGQTMVLNKQIDRFLQQFVDIGGRF KLVVFSDLTAQFAKDTTLSFARSAALAHLANGPHSRDLLFFTNPTDPEWDKLLNDLTP SFLMISTDNVTSNVCASQDIDLTKQFETIAFDVLTRSMSVVLLHSIKVNFVSVDAYYI QPLLVVAPDWPAFLAAHWDNNGTLLRNHLSKEIKFNQFETPADFWVKIITDVKATGKA SDTFDTLAAAVILSSLICSRRGAHRIYYPAREDAKRGLNVIRDRRLILNAAVVLLDKA DHVNSKLDLGDLWDGRMVYSIFDELSANQAVLPYRLQEDFAKYHQKAGLTVPLATDTN EKLFDPLPEITDPLVDLPILYSVTSPMIKRFVPEIEKMTSQNAVEEGVVQDYAEFLKD TSSWRLKAIEESYAQKEEKIEDAWQLKRANRAKQFLMRWYELFANSLEGRGSNLLVDF SRVPKGFAAPEEEVVDEKKTGKGGWSGQKQQKPGAGGKKGAVKETGKSKKDLILEANK KAKDQKLAESEKVKIKYGCQQGKESVIFLNNLYTSLDLPESKALCVFEVVVREGRTIF DQYQGADKQEIRRNAAIDLVGHLKDCFVKHWEYLESKQKEQIVDLWVSLGFEAPAGSK PSSEAKLKKLNLGINMVYYQLQYGGELIDIQSDPKKDDRVSGFAPDGWQRKMLDSVDR GNSALIIAPTSAGKTFVSYYCIEKVLRASDNDVVVYVAPSKALINQVCGSVYARFRNK SMKRGMSLFGTLTQEYSQNTMQCQVLITVPECLQELMLSRTPAVQKFVSHIKYVVFDE VHSIGASEESHIWEQLLLLIQCPFLALSATIGNADKLHEWLNASEQAKSAGKRRVELI NYGERYSELELSIMNIKDPHGEDDGVVHKKADTAVIPLMPYGVYMPEKLRMFSIPEDQ QLTARQILHLYNMMAEVDAATKKEFEPCKFFGQHGSKAVWISRSELRRMENALKERFM EWLSTDEQKINSILKILKEPVNTQLNYRSRPFNKEKVANDYIVHLVDNLKEKGELPAI CFNDDRHVCEKLAVTLANELERREVEYMDTDEFKNKYMIKDESKLVKLAKRKRDDAEK KKKGEKDEDAGPEKEDDEMDVLAMKKARLARALERFKLRGRNGGDPDIYAKMTERMQR NAKNRESTQLLLKLFERGIGFHHAGLNNTERGAVEVLFRSGNLAVLFSTSTLSLGVNM PCKTVMFGVDTLQLTPLLYRQMSGRAGRRGFDHSGNVIFMSVPTSKIRRLLTASLSNL QGNPPFTVIFLLRLFAYVHQQDIINEEGQKVSTMKQRAFAAKSLLEHSFSIHTRREAT DGVLQKQLRMFSAFSFQMLRHLQLLSPFGEGKNFAELAIHSQSGASGTLLFIHLMQKK CFHQLLKKYDNPEKAQLVMLEILANLFTNVRMSPFHERTDNLEHVHVNLRGLPSGLVP FVEEYNQTVSGLYKRFMAASSKDGNLLDPAFTVSGKLDTDTVSLTDDFLVAPLFDLYS HDESFLPVIDFNKKDHRGRQIQRNAFAYDFYVHGSRALLMDVNKLHVSQAWFLLHDFA SILERLAVGVHNMARPQDPLVLVLEELSKNYDEKFRKAFGMRTRD" gene complement(<76666..>77556) /locus_tag="CRE_04693" /db_xref="WormBase:WBGene00055549" mRNA complement(join(<76666..76872,77078..77320,77350..>77556)) /locus_tag="CRE_04693" /product="hypothetical protein" /db_xref="WormBase:CRE04693" /db_xref="WormBase:WBGene00055549" CDS complement(join(76666..76872,77078..77320,77350..77556)) /locus_tag="CRE_04693" /note="contains similarity to Pfam domain PF00810 ER lumen protein retaining receptor; contains similarity to Interpro domain IPR000133 (ER lumen protein retaining receptor)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86784.1" /db_xref="InterPro:IPR000133" /db_xref="PFAM:PF00810" /db_xref="WormBase:CRE04693" /db_xref="WormBase:WBGene00055549" /translation="MNVFRIAADMSHLLAIIILLLKIWKSRSCSGISARSQILFAVVF TARYLDLFTTYISLYNTFMKVVRSLITFLVATYATVYLMFFKFRSTYMRESDTFRIEL LIIPSVVLAFVINHDYAPFELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFAL GSYRALYIFNWIYRYYTEDYFDPIVVVAGIVQTVLYADFFYLYVTRVVNTRKGLELPI " gene <78369..>80543 /locus_tag="CRE_04507" /db_xref="WormBase:WBGene00055550" mRNA join(<78369..78451,78537..78787,78840..79048,79093..79195, 79962..80051,80104..80336,80394..>80543) /locus_tag="CRE_04507" /product="hypothetical protein" /db_xref="WormBase:CRE04507" /db_xref="WormBase:WBGene00055550" CDS join(78369..78451,78537..78787,78840..79048,79093..79195, 79962..80051,80104..80336,80394..80543) /locus_tag="CRE_04507" /note="contains similarity to Pfam domain PF00628 PHD-finger; contains similarity to Interpro domains IPR001965 (Zinc finger, PHD-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86657.1" /db_xref="InterPro:IPR001965" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00628" /db_xref="WormBase:CRE04507" /db_xref="WormBase:WBGene00055550" /translation="MISENGYMDLMRNCIKWNSRQMEDRKKRLRFPYYEHQTATAQRE SRFTTRTADHMYASNDPNTVMQFSTERWKKSKSHQPSDAVEMSMFLRENPSIQVAIDH MTPQVSNTIESISDNSNDSTSTRPIRQTQIKEEYREDYVLDDELSPDEMGSDEDDWST RGKRRKGNMNTTQKGSSTRKKVPTTRSSASRSTPSRASVKEVKYEEPEEKMHQCDKCN AKYKSLAGLSYHQAYWHDKKSNQLLEKLLSPSVEISSNCDFCNGTNFMNKNTRLPEEL VSCHDCGRSGHPSCLSFNENVTKIIKRSGWQCLECKSCTICGTSENDDKLLFCDDCDR GYHLYCLRPALEKAPDDEYSCRLCQIEFGDKASAPAKK" gene <86574..>91953 /gene="Cre-pxl-1" /locus_tag="CRE_04508" /db_xref="WormBase:WBGene00055552" mRNA join(<86574..86619,86906..87035,87163..87354,88498..88549, 90126..90272,90320..90493,90541..90636,90887..91021, 91675..>91953) /gene="Cre-pxl-1" /locus_tag="CRE_04508" /product="CRE-PXL-1 protein" /db_xref="WormBase:WBGene00055552" CDS join(86574..86619,86906..87035,87163..87354,88498..88549, 90126..90272,90320..90493,90541..90636,90887..91021, 91675..91953) /gene="Cre-pxl-1" /locus_tag="CRE_04508" /note="contains similarity to Pfam domain PF00412 LIM domain; contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)" /codon_start=1 /product="CRE-PXL-1 protein" /protein_id="EFO86579.1" /db_xref="InterPro:IPR001781" /db_xref="PFAM:PF00412" /db_xref="WormBase:CRE04508" /db_xref="WormBase:WBGene00055552" /translation="MPSDDRFADAVKPALEALLSDLQHTTEVLRRAHISDRRSQSRDD FDQTYDLQRTLDTQRRQRIFEKPRKNLWFVLRLFCLLSMSLFSVENGPEPNLPVYSRR SSRPSVQSLLSQVEEPIHAASSRKSLGPPSQAHSYSDVRSNGRSPSRDPLHSDSMIGT MNGELSSKHGVNTIPKGDCAACGKPIIGQVVIALGKMWHPEHYTCCECGTELGQRPFF ERNGRAFCEEDYHNQFSPKCQGCHRAITDRCVNVMNKNFHIECFTCAECNQPFGEDGF HEKNGQTYCKRDFFRLFAPKCNGCTQPITSNFITALGTHWHPDCFVCQNCGVNFNGGN FFEHNGTPLCERHYHEVRGSICSQCRGAINGRCVAAMGRKFHPEHFRCSYCNNQLTKG TFKEVDHRPFCHKCYNNTYALTPA" gap 93649..93704 /estimated_length=56 gene <94681..>96247 /locus_tag="CRE_04509" /db_xref="WormBase:WBGene00055553" mRNA join(<94681..94779,94825..94953,95014..95136,95180..95387, 95883..>96247) /locus_tag="CRE_04509" /product="hypothetical protein" /db_xref="WormBase:CRE04509" /db_xref="WormBase:WBGene00055553" CDS join(94681..94779,94825..94953,95014..95136,95180..95387, 95883..96247) /locus_tag="CRE_04509" /note="contains similarity to Pfam domain PF01482 Domain of unknown function DUF13; contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86802.1" /db_xref="InterPro:IPR002485" /db_xref="PFAM:PF01482" /db_xref="WormBase:CRE04509" /db_xref="WormBase:WBGene00055553" /translation="MSTRWLYNLKLFIILFFCFTIFFLLFYPEYTGNGHLGSYRTAFL SVTRNKRFLVAADEWRTCFSDKLKKSRQEPKEMWYWVKRATNQCRNQTSFSRIELTGV KNKDEMKYHVYSPSQEPSVVVTLGIGLDVKAETTLKNTLPFGSTFFAADPIFKGNGEL YEPVGLYFPFAVGKETDVSTALVLKNGHYIKQVMPHIDIITFFKKFVKESTIDQFLMD NEGPEYDILPMMARGAEFDQNGIVVCQVNTEVHQADEERKTKFLGIMNTIIEDGRYAF MVSYATVHHRFFFINIEHPICVEKYFARFFE" gene <97411..>98404 /locus_tag="CRE_04510" /db_xref="WormBase:WBGene00078730" mRNA join(<97411..97623,97667..97807,97853..>98404) /locus_tag="CRE_04510" /product="hypothetical protein" /db_xref="WormBase:CRE04510" /db_xref="WormBase:WBGene00078730" CDS join(97411..97623,97667..97807,97853..98404) /locus_tag="CRE_04510" /note="contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86592.1" /db_xref="InterPro:IPR002485" /db_xref="WormBase:CRE04510" /db_xref="WormBase:WBGene00078730" /translation="MPSHARNLRLYISIALLIFLFFARQRSLNVIFEEREMSQFVNET DKLLSPFDLEVAKWKTCMQNNMEKDQVTWFLTRFAVTKCRNETQFSKVPVAKTMTKNE IMKGVPSYNMFINSTKEPYTVVTIGNISREETKKQLVDNLPKDSKFFGTHWNSSQIFS EYQKLEEYLNSSNNTNIIHLSDYLETLSGVKIIDLVGASLSKTILNSVFFQLSIIYEI SNFELFRELSNDGEIEREGLLICQIKLRVDYPDALKKEELIEVISTIILDARYLILSI HNLEIFMVNFDTPVCREKYLGPYII" gene complement(<98468..>99754) /locus_tag="CRE_04694" /db_xref="WormBase:WBGene00055554" mRNA complement(join(<98468..98739,98830..98963,99015..99198, 99490..>99754)) /locus_tag="CRE_04694" /product="hypothetical protein" /db_xref="WormBase:CRE04694" /db_xref="WormBase:WBGene00055554" CDS complement(join(98468..98739,98830..98963,99015..99198, 99490..99754)) /locus_tag="CRE_04694" /note="contains similarity to Pfam domains PF08768 (Domain of unknown function (DUF1794)), PF01549 (ShK domain-like); contains similarity to Interpro domains IPR014878 (Region of unknown function DUF1794), IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86572.1" /db_xref="InterPro:IPR003582" /db_xref="InterPro:IPR014878" /db_xref="PFAM:PF01549" /db_xref="PFAM:PF08768" /db_xref="WormBase:CRE04694" /db_xref="WormBase:WBGene00055554" /translation="MINRFLSSSVYFGFVISIILSTSSDAKIASKCRDTDMNCAVWVC YDVIVSRSKEKFQVATNSSDCENVELVSSHCQRSCQVCGEPIDPKYDVKLLPPKLKSI AWMVGRWRSEFGGKAFFPTIPKFTYGEQVDITIADNAEDAKTPLLNYTAFAWDINMPD GDPTEIHSENGYIAVDYDKEQEKEYVSLNTAMSNGFMTIEEGESGPNQVKFRLQRIGR ISFSHDSAVRIVSFKWVKRERKQRFQMFREWTLLDENRLESRLLMTTTITRRLMEHTA VIYKKIYP" gap 101701..116669 /estimated_length=14969 gene complement(<116852..>117504) /locus_tag="CRE_04695" /db_xref="WormBase:WBGene00055555" mRNA complement(join(<116852..116975,117020..>117504)) /locus_tag="CRE_04695" /product="hypothetical protein" /db_xref="WormBase:CRE04695" /db_xref="WormBase:WBGene00055555" CDS complement(join(116852..116975,117020..117504)) /locus_tag="CRE_04695" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86613.1" /db_xref="WormBase:CRE04695" /db_xref="WormBase:WBGene00055555" /translation="MDSCEDFDMCEDMDKIDLCFPTKKEDDSKPCDCQNIEDRFREFK QSTYKEIHQLSCALKKVGYSPLCPDVKRRTDLDYIRKCLDRMTADQAVFYSRAGEVLV GCYVTPLRPTEVQCGQGKLNLCQYFAAKWCYSIDDNQYVVINGCGAAYPVSELFIVRV PRPEAMQNDREVRAQKKRDSGMRWSIPSSDISGVQKVLRPNK" gene complement(<119607..>124697) /locus_tag="CRE_04696" /db_xref="WormBase:WBGene00069664" mRNA complement(join(<119607..120124,120167..120445, 120489..121227,121271..121489,121630..121932, 121976..122697,122739..122971,123012..123224, 123267..123757,123804..124053,124098..124398, 124445..>124697)) /locus_tag="CRE_04696" /product="hypothetical protein" /db_xref="WormBase:CRE04696" /db_xref="WormBase:WBGene00069664" CDS complement(join(119607..120124,120167..120445, 120489..121227,121271..121489,121630..121932, 121976..122697,122739..122971,123012..123224, 123267..123757,123804..124053,124098..124398, 124445..124697)) /locus_tag="CRE_04696" /note="contains similarity to Pfam domain PF03175 DNA polymerase type B, organellar and viral; contains similarity to Interpro domains IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR004868 (DNA-directed DNA polymerase, family B, mitochondria/virus)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86687.1" /db_xref="InterPro:IPR004868" /db_xref="InterPro:IPR006025" /db_xref="PFAM:PF03175" /db_xref="WormBase:CRE04696" /db_xref="WormBase:WBGene00069664" /translation="MKRKTLNTHSSRGGAPPPTSLEPKTKKTKPESRSHEKEEENVDH TRTDKKRKYQPSTSSVQNQGGFLEEKKRQSKPARIVSTQRHGKGPQRKMQLRDFERSE TFPTPEEEEFFTENVITSNEPHFRRHNSQFLIADTVRMKFINLDKVKDNKILHQHVAK LLDIFIRRMLKKSGGNLKTSKYWLQLNHDGYTDRDGFFVTHKTYAVADGGVIMNEIAK QMQSNKELRLDESFTVAMNVFKDKQSQLRGRGTHATRKTEKIEKIRRVLLKQHFGVSL SRVTGMSHCLPKALALGKLESDIETTANGDERQKMEKFYRSLVRPEVLLDSLIVRNMC FLQITPKFKSESQGKLAKQLLADAGMDVNKEEHGRKDLIELANYLSNYQIILWAANKH QVVPTEEKRFNPDGKGFIGLFYYEGHYEHVNHTKGKHASRFCYQCSTFDDNQHYRKCK AKCKRCGATGCKQEDENIYCSFCNIYFRSKMCFDAHLTAKSKKGLPHCKKYSRCEKCN LIDRSERIRGETHVCDAKAYCPICREKALKGHTCAHHVPDEKEKLRKQENQKQWAIIV YDMECIVAESGLFEGHIERGPKHKPNLICVRMICSDCRGEEGCQLCVQPWTYSYKDFP PFKNNKHDSPLASFADFLLHNPRAAGAYVIAHNGGRYVSIVNFFNFQDIFRYDHVMLL AELDRQGGTKAKEPKILLNGMTIITAEFEYEKRKLHFRDSFQYLQMGLAKMPGAFGLE GEAKGFFPHLFNHPDNYDKELKTLPSKEYYSPQFMAPSTKKEFDDWYEKCYHDGFKLH DELLKYCQSDVRILTLTLMSFIEMCESTFNGWNPIVNGCTIASYVMFVLKHEYIKKGD VGYIPENGYGGGNNSMLALKYIQWLEKIDPTLHLKYKLRGGEVKIEANGHSYFADAFN ETTNEVFEIYGCVWHGCPKCYPDRDKKCPMRPDKTMEALYKETMKREEDILNEGFNLN SVWECEIYEQMEKDREMQKFFELNKYDQRLKPREALYGGRTQAFRSMAVAIEDIFLNY YDFNSLYPYLNAGGTAYPRGNPIVVDKDFPNTDEPLKLKGMHIFPILTNIYILGIVFC DVLPTQDAAMGYLPQKIMKKLMFVLCRTCANNQNIEGKCTHTKVSERFLTGVWCTDEL NKAVLKGYKVLKYHEIWHWPEEAWVKGGFFADYIKPLLKLKHESSGWPKENMTDEEKK AYIARIWEMDGVKLDPLKIIKNKALRSLCKIFLNSAWGKFAQNPMKVETRLIYNSDGL AMANFFNDPNFEPTGLLPYGEHKHFISRRPKKDFLKTSPFTNLAIAAITTCAARLRLT EAIERVGIENMIYCDTDSVIFKQKKDSDPLGDLKGDNLGYLTNEIPPGNELVEAVAMA PKVYALKIRDKDGNYSYTVKAKGMCLNSGNTGSINFDTMKESVGISSVMLWPTYSFQM NAFIRDGVATPMEGEMLTFKRGDNALDGLWTFRLKKSLNPRMDKGHYVDGVVAPFGQI SGDIQLINDYPF" gene <125055..>125647 /locus_tag="CRE_04511" /db_xref="WormBase:WBGene00055557" mRNA join(<125055..125476,125524..>125647) /locus_tag="CRE_04511" /product="hypothetical protein" /db_xref="WormBase:CRE04511" /db_xref="WormBase:WBGene00055557" CDS join(125055..125476,125524..125647) /locus_tag="CRE_04511" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86708.1" /db_xref="WormBase:CRE04511" /db_xref="WormBase:WBGene00055557" /translation="MPPKLSGNRGKRCNCMDPLRNIRSKYTSQCKMFRTFREIRYRGG LGIECGLLQDSETLRYRIADQLAKDEAIFYYKDGRILEYCEVITKCPSEVPSIQDGAN LLEFYNSRLKENITDEQFVVMDKQRIYYPISELFIAKVPTPCSSCKNFPHSTTTIFPR LFFQNYLFPDRMKPRIPGKSE" gene complement(<126754..>128205) /locus_tag="CRE_04697" /db_xref="WormBase:WBGene00055558" mRNA complement(join(<126754..126882,126931..127087, 127134..127315,127365..127514,127625..127933, 127983..128125,128184..>128205)) /locus_tag="CRE_04697" /product="hypothetical protein" /db_xref="WormBase:CRE04697" /db_xref="WormBase:WBGene00055558" CDS complement(join(126754..126882,126931..127087, 127134..127315,127365..127514,127625..127933, 127983..128125,128184..128205)) /locus_tag="CRE_04697" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase); coded for by the following C. remanei cDNAs: DR775640" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86810.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR016130" /db_xref="PFAM:PF00102" /db_xref="WormBase:CRE04697" /db_xref="WormBase:WBGene00055558" /translation="MTTRNTGKKSRGKKAGSNTTTQRSKERATEREREGSQKTIVEDP TNLEKKTQRKQILKFVKNTLEKGPPGLRNEFGSMKRFNDFEKMKAFKGAQEMGKNRYK DVGCLDNNRVKLNNPPWTHDYVHANYVATPSNPKRFICTQAPLEKTCADFWYMCLQEK VETIFMLCNLTEKGAKKCFEYYPSKDKESVEFEEKGVKVTVKLESPKQEQLKFDKNSD AKVMETVFIVEGPGGATQKTTHYHWIDWPDRGVPTADMAIIELLAKTRASKAPIVVHC SAGIGRTGSVVMIEYIMDQLLSGQQIEESDKILQKIRDQRNNSIQTEQQYLFVHQVMM NYFMEKKLFDSAVKMAHLAFTEQYLKSVH" gene <128906..>129311 /locus_tag="CRE_04512" /db_xref="WormBase:WBGene00055559" mRNA join(<128906..128942,128991..129044,129091..>129311) /locus_tag="CRE_04512" /product="hypothetical protein" /db_xref="WormBase:CRE04512" /db_xref="WormBase:WBGene00055559" CDS join(128906..128942,128991..129044,129091..129311) /locus_tag="CRE_04512" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86797.1" /db_xref="WormBase:CRE04512" /db_xref="WormBase:WBGene00055559" /translation="MFSANLFLIILFASSSFFNLVSSHPLIGIRDDLSSEFVGVGLRD DVALSIHKRRVEKPTESPFCTEHRQTFEDYCNNMWTDRPSRIQNALFTFCPGYENRCL H" gene complement(<129531..>131994) /locus_tag="CRE_04698" /db_xref="WormBase:WBGene00055560" mRNA complement(join(<129531..129761,129814..130275, 130326..130469,130521..131160,131215..131865, 131990..>131994)) /locus_tag="CRE_04698" /product="hypothetical protein" /db_xref="WormBase:CRE04698" /db_xref="WormBase:WBGene00055560" CDS complement(join(129531..129761,129814..130275, 130326..130469,130521..131160,131215..131865, 131990..131994)) /locus_tag="CRE_04698" /note="contains similarity to Pfam domain PF03399 SAC3/GANP/Nin1/mts3/eIF-3 p25 family; contains similarity to Interpro domain IPR005062 (SAC3/GANP/Nin1/mts3/eIF-3 p25)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86893.1" /db_xref="InterPro:IPR005062" /db_xref="PFAM:PF03399" /db_xref="WormBase:CRE04698" /db_xref="WormBase:WBGene00055560" /translation="MGDKVMSIPVPQEAGAHPDAWRKANEELMKVRSLNLSHCSIELN LFFKVQGGATKKSTASYGDSNTGQNSWMNNPFPYPSANPPSAYGQFGGGWHPSTWNPY VPPPPPPQQVPATAQPVYNQTSFNYPSGQQQNWNNGYGKGRGGGSGAGAGNWNQQQKP QFQPFALNRKNNASGIPHISNTFVPQGGSGPQPLMGAGRGRGAPMQQAGGPKPTPPSA QRYMNRAFEAANSAEDRLKTQEYLAKRLQPLLNAGNAHMINWDIEPLPHEKNFELTTA WTPANKLPHQANGFNRKKSPQRRRSDEFSNGGDSGGSQMKRARRDSDGASSDSDNSDP LEILHFSSTTQVFELDGKWGGKKLGHGNICDFTLINNSSNDDKFVLKNSNHVQKKTKA QKKAEKRARKADKKQKQKQPTPQKVKEPWKANGADTQAKKDDRARRFAETLPNVSKPM VSIVQQYFRRGQVVRGTCQNIEKSFFRLTAAPIPSEVRPLEVLRLSLQNVRDKYRAKA EYSYLTSQLRSIRQDLTVQRIRDEFTVEVYEINARISLENADREEFNKCQSQLKLLYA EVENCPNQAEFVAYRLLYYIAMDNKIDINALLRELTPELKEDKCIDFALNVRRAVTMN NYIKFFKLFKSAPRMCPYIMDLFVDRERKKAIGIITKAYRPTITYKLISEFLNMKEYD LVDWLEEELKWTDVAVGGVFDPKIPRNL" gene complement(<132542..>133197) /locus_tag="CRE_04699" /db_xref="WormBase:WBGene00055561" mRNA complement(join(<132542..132683,132732..132825, 132903..133007,133053..>133197)) /locus_tag="CRE_04699" /product="hypothetical protein" /db_xref="WormBase:CRE04699" /db_xref="WormBase:WBGene00055561" CDS complement(join(132542..132683,132732..132825, 132903..133007,133053..133197)) /locus_tag="CRE_04699" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PTD4; coded for by the following C. remanei cDNAs: DY529568" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86829.1" /db_xref="WormBase:CRE04699" /db_xref="WormBase:WBGene00055561" /translation="MTDNKVNITDNLESLKEGEIVTDEKTGKKYRVKKNIMPHYSAGG PHGLGDPEDRTLRKIEADVIIPNRMNTRIERVECNESYLGLVSCFRTDGAVSGLNTCK PALELFNRCKYEKFHDPAFRTKITDEYIAERSAARASGMTSQQRKLEEFREWKKSNEG K" gene <134057..>135135 /locus_tag="CRE_04513" /db_xref="WormBase:WBGene00055562" mRNA join(<134057..134176,134217..134461,134512..134774, 134831..>135135) /locus_tag="CRE_04513" /product="hypothetical protein" /db_xref="WormBase:CRE04513" /db_xref="WormBase:WBGene00055562" CDS join(134057..134176,134217..134461,134512..134774, 134831..135135) /locus_tag="CRE_04513" /note="contains similarity to Pfam domain PF00090 Thrombospondin type 1 domain; contains similarity to Interpro domains IPR008085 (Thrombospondin, subtype 1), IPR000884 (Thrombospondin, type I)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86908.1" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR008085" /db_xref="PFAM:PF00090" /db_xref="WormBase:CRE04513" /db_xref="WormBase:WBGene00055562" /translation="MFWAFFIFFIHAGLAHSLSTKCTSDNGIFCECSQENSEIKIWNC IRPGGWSAWSKWSKCREGVRKRRRNCNNPLPIATICYGAKVEKQKCAVSSNIPEYLFG EWTSWNPWSRCDCNSNQRLRSRHCKGNSCEGCDKQYEDCLPGSCPVSKKWSSWTDWVD YGSIANLCQLTFLCNLGIEQVRYSAWCSSSNVANVDVGFRTEVQESNKHAEWSEWNMH PGVTYRYRILRNSSISIEHHLLSRSTSSCLPLYFAIPIFCFSILTGFILQNIILCVVN RCQRKFSKLTYSYDSDPRDYPSHLIRSPKDESFW" gene <135574..>137193 /gene="Cre-aldo-2" /locus_tag="CRE_04514" /db_xref="WormBase:WBGene00055563" mRNA join(<135574..135615,135675..135756,136171..136922, 136969..>137193) /gene="Cre-aldo-2" /locus_tag="CRE_04514" /product="CRE-ALDO-2 protein" /db_xref="WormBase:WBGene00055563" CDS join(135574..135615,135675..135756,136171..136922, 136969..137193) /gene="Cre-aldo-2" /locus_tag="CRE_04514" /note="contains similarity to Pfam domain PF00274 Fructose-bisphosphate aldolase class-I; contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR000741 (Fructose-bisphosphate aldolase, class-I); coded for by the following C. remanei cDNAs: DT934635, DY526695, DR778729, DR782375, DY529157, DT935103, DR779828, DR409074, DT936688, DR775935, DR782243" /codon_start=1 /product="CRE-ALDO-2 protein" /protein_id="EFO86555.1" /db_xref="InterPro:IPR000741" /db_xref="InterPro:IPR013785" /db_xref="PFAM:PF00274" /db_xref="WormBase:CRE04514" /db_xref="WormBase:WBGene00055563" /translation="MATVGGAFKDSLTQAQKDELHQIALKIVQDGKGILAADESTGTI GKRLDAINLENNETNRQKYRQLLFTTPNLNQHISGVILYEETFHQSTDKGEKFTDLLI KQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAATFKKGGCGFAKWRCVLNIGTH TPSHLGMLENANVLARYATICQANGLVPIVEPEVLCDGEHDLARAQKVTEQVLAYVYK ALADHHVYLEGTLLKPNMVTPGQSSSSKATHEEIGLATVTALRRGVPAAVPGITFLSG GQSELDATANLHAINTAPLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHR SKANGDASLGKYQGEDAAGAAAESLFVAKHSY" gene complement(<137359..>138344) /locus_tag="CRE_04700" /db_xref="WormBase:WBGene00055564" mRNA complement(join(<137359..137517,137572..137718, 137764..137878,137926..138053,138102..138229, 138275..>138344)) /locus_tag="CRE_04700" /product="hypothetical protein" /db_xref="WormBase:CRE04700" /db_xref="WormBase:WBGene00055564" CDS complement(join(137359..137517,137572..137718, 137764..137878,137926..138053,138102..138229, 138275..138344)) /locus_tag="CRE_04700" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86759.1" /db_xref="WormBase:CRE04700" /db_xref="WormBase:WBGene00055564" /translation="MNDDKLRSLFASLATLTQQGPIPVQAYSMLAGQHSTEVLAEHMR LRWLSDGRFAPLAANILMHIHKADTKDISLSSNVLALLLNDYRNRLSVRNDSRLMFRN SVKTLFAMYPVYVKMDECVSKCFIKPMFSSLDALIDDGPDTDDLETAGILLSENGKIL HDLNSYLVERIIVKLRHKLISEDPVVTKHVRQIFIHVYDLWAFGWSELNIPECLLTLS AEGKLSIVDQTPLRKNDISKQEFGSKESII" gene complement(<139140..>139998) /locus_tag="CRE_04701" /db_xref="WormBase:WBGene00055565" mRNA complement(join(<139140..139290,139351..139692, 139740..139843,139957..>139998)) /locus_tag="CRE_04701" /product="hypothetical protein" /db_xref="WormBase:CRE04701" /db_xref="WormBase:WBGene00055565" CDS complement(join(139140..139290,139351..139692, 139740..139843,139957..139998)) /locus_tag="CRE_04701" /note="coded for by the following C. remanei cDNAs: DR407216, DT937061, DT933621, DY528802, DR780962, DR776614, DT934324, DR780642" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86705.1" /db_xref="WormBase:CRE04701" /db_xref="WormBase:WBGene00055565" /translation="MNIAQNNRLEQLRAVEADLLCPPPADPFQCFPTGWTRAANLKEN EWIRMSNREKPMSPPPREPSPEIRRAMRRAAPPRNNRPAPLQVPERRALRQLNGVPNR RPCTPPPVNRSNPEIAVPVENVAEPRRRALSPTQLPGVRAIPKDYNRFFRGLLAPGEY FAKSQTRYLGPFDEMPTEATLPSNDDYVILQRMGRLPDSGKSIFRQVGTLST" gene complement(<140465..>141946) /locus_tag="CRE_04702" /db_xref="WormBase:WBGene00055566" mRNA complement(join(<140465..140646,140690..141559, 141611..141725,141773..>141946)) /locus_tag="CRE_04702" /product="hypothetical protein" /db_xref="WormBase:CRE04702" /db_xref="WormBase:WBGene00055566" CDS complement(join(140465..140646,140690..141559, 141611..141725,141773..141946)) /locus_tag="CRE_04702" /note="contains similarity to Pfam domain PF00850 Histone deacetylase domain; contains similarity to Interpro domains IPR000286 (Histone deacetylase superfamily), IPR003084 (Histone deacetylase); coded for by the following C. remanei cDNAs: DT935802, DY529362" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86594.1" /db_xref="InterPro:IPR000286" /db_xref="InterPro:IPR003084" /db_xref="PFAM:PF00850" /db_xref="WormBase:CRE04702" /db_xref="WormBase:WBGene00055566" /translation="MTVSQPVKEHSKRRVAYYYDSNIGNYYYGPGHVMKPHRIRMAHE LILNYGLYRNLSIYRPTPASFKDITRFHSEEYVNYLKGANLDNVTSFGINNQFSSVLT NDDCPMFDGLYDFCRLSCGGSLAAAVKLNKKKTDIAINWMGGLHHAKKSEASGFCYTN DIVIGILELLKHHKRVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHRHGDFFPGTGDIT DIGAGKGKLYSVNVPLADGIRDEAYKNLFEKVMDEVMYRFQPEAVVLQCGADSLNQDR LGRFNLTLKGHGNCVSYFRSRGLPLMLVGGGGYTPRNVARCWAYETALAVDMEVSNNI PFNNYYEYFGPDFQLHIDQRPVKDDNIDLDKKIETILDNLKLLNPVPSVERKTSPPDA VVPDEKIVVEYADPDVTLPQELEDSIIQHEGEFFDHEREGDDRRNEHNGRLSAE" gene <142475..>144067 /locus_tag="CRE_04515" /db_xref="WormBase:WBGene00055567" mRNA join(<142475..142493,142539..142763,142813..143048, 143096..143257,143309..143516,143560..143743, 143790..143960,144016..>144067) /locus_tag="CRE_04515" /product="hypothetical protein" /db_xref="WormBase:CRE04515" /db_xref="WormBase:WBGene00055567" CDS join(142475..142493,142539..142763,142813..143048, 143096..143257,143309..143516,143560..143743, 143790..143960,144016..144067) /locus_tag="CRE_04515" /note="coded for by the following C. remanei cDNAs: DR781121, DR408964" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86661.1" /db_xref="WormBase:CRE04515" /db_xref="WormBase:WBGene00055567" /translation="MDNSGKGNSFTYHDIRKSQPHTTDETTVETQENEATGTDMDIEV DIYNEDVDDFYIEVVEQPSGLKLPKADSHCDRKNRKMERIAGSISSVKVDAIEVGTSV ILATSDRTLTHPTVDKAVKNGIAEATFLGDISIEALVEGMLVPSAADGRFAMLGTSVM WNALKSNIRDLKSSISEQTAQSFLEPRFDGIDLQLANVPNYERSYRIQAVGVFSNADL GYVYSLLKFRTSAKLLNKTKQFLKAYFIVACRPRCMIWRYTLRRSGNSHKKAILNLPQ EIIQTVLTFLIDLTGIGDGSKPLESLNRSTPFYHSLGEDEAVRQQRYYEACKLKDLLM SFFRETITDCLNEIREMPFCLNTGTMISPLRGRSQRNASVMWKDYESYLKTEHDLPSE ANMKKRIAFEQKLCDIVPRGIHVIRR" gene <144372..>145010 /locus_tag="CRE_04516" /db_xref="WormBase:WBGene00055568" mRNA join(<144372..144623,144666..144764,144810..>145010) /locus_tag="CRE_04516" /product="hypothetical protein" /db_xref="WormBase:CRE04516" /db_xref="WormBase:WBGene00055568" CDS join(144372..144623,144666..144764,144810..145010) /locus_tag="CRE_04516" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8P6G2" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86762.1" /db_xref="WormBase:CRE04516" /db_xref="WormBase:WBGene00055568" /translation="MWRQVKGAEKFNNGGFTACSLLVTHFELKIAGVDPKKKIEVGSF RVSPTGEQKGLKEIGYARSESHLTEIIEHVCDEAKQYKLVVNTLTGKSVYVHKDATYL KGDESSKIRSRLQNACNDFIDSHEDELLTFLKTAHEEPVKTFCHYEIGVCSSVDVAAL PPNEPPKNEEEPMNLSDIPDDEL" gene <145269..>146799 /gene="Cre-eng-1" /locus_tag="CRE_04517" /db_xref="WormBase:WBGene00055569" mRNA join(<145269..145366,145417..145989,146034..146291, 146336..146536,146583..>146799) /gene="Cre-eng-1" /locus_tag="CRE_04517" /product="CRE-ENG-1 protein" /db_xref="WormBase:WBGene00055569" CDS join(145269..145366,145417..145989,146034..146291, 146336..146536,146583..146799) /gene="Cre-eng-1" /locus_tag="CRE_04517" /note="contains similarity to Pfam domain PF03644 Glycosyl hydrolase family 85; contains similarity to Interpro domain IPR005201 (Glycoside hydrolase, family 85)" /codon_start=1 /product="CRE-ENG-1 protein" /protein_id="EFO86865.1" /db_xref="InterPro:IPR005201" /db_xref="PFAM:PF03644" /db_xref="WormBase:CRE04517" /db_xref="WormBase:WBGene00055569" /translation="MTITPITTLEELWNWEKREDVGNEYIEPLAHYKSHSGPQILVCH DMKGGYLEEETVEGKQFENEKYPYMFLNWWEIDIFNYFSHNFVTIPPEGYTKIAHKHG ISYRTLSIFKLPEFPGVLSLGTFITEWIPGKEICSKILESEEAMERTVASLVAVSNHF GFDGWLINIENEIDENKVDLLVRFCASLTRKSKQINSNSKIIWYDSVLHSGKLKWQNA LNSENNKFYEACDAIYLNYNWKDGDLLRSAEFGLLERIFVGIDVWARGCVGEFKCDQS FALAKLFHMSVALFGPGWIYEKFSEENQIYKGIQFWSKLYPHVKTRPLTSGNLSTNFD TGMDGSWHYRLSNVQLQPQNITTSCHQVIGKGLTLFGRHRKFLIFSFDNITFESMKIV CESDKPIEMILNRTELISKMNEHEWIYKSSGILESISIQTTSHDETVIRIFSVISH" gene complement(<147054..>148491) /gene="Cre-rabn-5" /locus_tag="CRE_04703" /db_xref="WormBase:WBGene00055570" mRNA complement(join(<147054..147204,147251..147984, 148031..148237,148285..148392,148441..>148491)) /gene="Cre-rabn-5" /locus_tag="CRE_04703" /product="CRE-RABN-5 protein" /db_xref="WormBase:WBGene00055570" CDS complement(join(147054..147204,147251..147984, 148031..148237,148285..148392,148441..148491)) /gene="Cre-rabn-5" /locus_tag="CRE_04703" /note="contains similarity to Pfam domains PF09311 (Rab5 binding), PF01363 (FYVE zinc finger); contains similarity to Interpro domains IPR000306 (Zinc finger, FYVE-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR015390 (Rabaptin, GTPase-Rab5 binding), IPR017455 (Zinc finger, FYVE-related); coded for by the following C. remanei cDNAs: DR407040" /codon_start=1 /product="CRE-RABN-5 protein" /protein_id="EFO86841.1" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR015390" /db_xref="InterPro:IPR017455" /db_xref="PFAM:PF01363" /db_xref="PFAM:PF09311" /db_xref="WormBase:CRE04703" /db_xref="WormBase:WBGene00055570" /translation="MSEPSSSEEVSQEAKAGEQANTAVMKKVSQVSPNPAFQCEMCQN YEVNLTTMQENERKLKEEVKAAMELAERYQLDLSNERDYRKELEKKMNELSTNCLNQV NEAAKINAKSEQRLDELSAKHDKSIEVFTDQLNLARDKLQQADDDFITLGKKYKKLLG STRKAAQELRSEKIDLPADIDQLQFICLKNREELIETRAAKEHTEQQLQDEISILRAQ IQEERAHREDQEVTFTAEISRLQSELGSVNSKMAQVSETITEQTSNNRQIRDLQATVA ELENQVQQVQNERSAVEQTAQNYKQRCTSLQQELDTSEVVQRDFVKLSQSLQIQLEKI RSSEQEVRWQWDEDVNKCSNCDTSMVRLKPKPHCLHCGKIFCSNCLKDTVPSGPSNRL ANVCSVCHTLLNRDSKPFFATQDT" gene <149415..>150974 /locus_tag="CRE_04518" /db_xref="WormBase:WBGene00055571" mRNA join(<149415..149508,149559..149976,150029..>150974) /locus_tag="CRE_04518" /product="hypothetical protein" /db_xref="WormBase:CRE04518" /db_xref="WormBase:WBGene00055571" CDS join(149415..149508,149559..149976,150029..150974) /locus_tag="CRE_04518" /note="contains similarity to Pfam domain PF02127 Aminopeptidase I zinc metalloprotease (M18); contains similarity to Interpro domain IPR001948 (Peptidase M18, aminopeptidase I); coded for by the following C. remanei cDNAs: DT937505, DY527864, DY527554, DY526227" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86887.1" /db_xref="InterPro:IPR001948" /db_xref="PFAM:PF02127" /db_xref="WormBase:CRE04518" /db_xref="WormBase:WBGene00055571" /translation="MAATLKPNAPEIRKAAQEFINYLNKAVTPFHATQEVKERLIQAG FKELPESGHWDIQPTSKYFVTKNRSAILAFAVGGSYKPGNGFSIVVGHTDSPCLRVKP ISHQKSEKFLQVGVSTYGGGIWRTWFDRDLSVAGLVIVKNGEKLQHKLIDVKKPVLFI PNLAIHLETDRTTFKPNTEIELRPILETFAAAGINAPVKEDPKGEYDPRSIVSNHHTQ FLGLIAKEAGCQPEDIVDLDLYLYDTNKPAIVGLEDEFISGARLDNQVGTYTAISGLL ESLSAPAFQSDPQIRIAACYDNEEVGSDSAMGASSAFTEFVLRRLSAGGSTTAFEEAI GKSYLISADQAHAAHPNYPAKHEENHRPTFHGGVCVKTNVNQRYATTATTHAILKQIA FEAGVPLQDMIVRNDSPCGSTVGPILSTKLGLQTIDVGCPQLAMHSIRYVLFLKFSFN QFIYSEFADTSSIFQATTLYSTFYERLATVLANIQ" gene complement(<151134..>153205) /gene="Cre-dpf-4" /locus_tag="CRE_04704" /db_xref="WormBase:WBGene00055572" mRNA complement(join(<151134..151590,151640..152256, 152303..152801,152847..>153205)) /gene="Cre-dpf-4" /locus_tag="CRE_04704" /product="CRE-DPF-4 protein" /db_xref="WormBase:WBGene00055572" CDS complement(join(151134..151590,151640..152256, 152303..152801,152847..153205)) /gene="Cre-dpf-4" /locus_tag="CRE_04704" /note="contains similarity to Pfam domain PF00326 Prolyl oligopeptidase family; contains similarity to Interpro domains IPR001375 (Peptidase S9, prolyl oligopeptidase active site region), IPR011042 (Six-bladed beta-propeller, TolB-like); coded for by the following C. remanei cDNAs: DY529406, DT934790" /codon_start=1 /product="CRE-DPF-4 protein" /protein_id="EFO86756.1" /db_xref="InterPro:IPR001375" /db_xref="InterPro:IPR011042" /db_xref="PFAM:PF00326" /db_xref="WormBase:CRE04704" /db_xref="WormBase:WBGene00055572" /translation="MTTEAVYGSWSSPITPDLFGKCNCKSICELQVVGDHVYWIEQNA VTGKRELYSKPTNGDQITRWADGFSVQTAVHEYGGGALHVLQDGSVLFATVEGVFYQK SADSGVEQLAEANNRTFRFADFSVTDSHVFCVNENHQGDSKFPENRLISIDRSTKNQS VVASGADFYAYPRVSPNGNKLVWMQWNHPNMPWDETSIKMADLNGGVTSNEVTLKDGT GKQINYSEPTWDGEELLTVNDSTNWWNVYRSAAEPNALEKNLNPIQREISYPLWQLGF RNYVINKKYLVMNADGVLYVRSGDVTVEIPTPGYTVFGYLSIDPNGSEIFAIASGPKR ASSVISIDLKNKDFRLKVHRESRNSSDIDSLEISEPEEIVFKSGGVNVSGYFYPPKNS SYTAPPGTLPPVLLLGHSGPTAPAQNNLDLKKQFFTSRGIAVFDVNYRGSTGFGTEFR RMLYKNSGIVDRDDVLNGAKALIEQGRVDENKVLITGSSAGGFLILSCLISPNNIIKA AVSLYGVADLLGLDEDTHKLEQSYNELLIGKYPEEASIYEERSPIYHIDKIRTPIAFL HGKEDTVVPMNQSVTMFEKIRASGVTTALMLFDGEGHGFRNGEVIKESTEATFYFLMK AVGIQPSISSKIEIFNKKL" gene complement(<153763..>155505) /gene="Cre-alh-9" /locus_tag="CRE_04705" /db_xref="WormBase:WBGene00055573" mRNA complement(join(<153763..153967,154021..154746, 154797..155254,155302..>155505)) /gene="Cre-alh-9" /locus_tag="CRE_04705" /product="CRE-ALH-9 protein" /db_xref="WormBase:WBGene00055573" CDS complement(join(153763..153967,154021..154746, 154797..155254,155302..155505)) /gene="Cre-alh-9" /locus_tag="CRE_04705" /note="contains similarity to Pfam domain PF00171 Aldehyde dehydrogenase family; contains similarity to Interpro domains IPR016163 (Aldehyde dehydrogenase, C-terminal), IPR016162 (Aldehyde dehydrogenase, N-terminal), IPR015590 (Aldehyde dehydrogenase), IPR016160 (Aldehyde dehydrogenase, conserved site); coded for by the following C. remanei cDNAs: DR408428, DY526405, DT933275, DY527957" /codon_start=1 /product="CRE-ALH-9 protein" /protein_id="EFO86805.1" /db_xref="InterPro:IPR015590" /db_xref="InterPro:IPR016160" /db_xref="InterPro:IPR016162" /db_xref="InterPro:IPR016163" /db_xref="PFAM:PF00171" /db_xref="WormBase:CRE04705" /db_xref="WormBase:WBGene00055573" /translation="MNRFLNKGMVATLQRRMASQLLINDSKYAFLKELGIKENNAGVF HGKWAANGQTVQSFAPANNSPIANVQNGNVKDYEIAITEARKAYNDWCEVPAPRRGEI VRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEYVDICDYATGLSRSLEGKIFPS ERPGHALLEQWNPLGVVGVISAFNFPCAVYGWNNALALVTGNSVVWKPAPSTPLTAIA VTKLVEKVLVANNVNPALCSLVCGEGDVGQALVKDKRVNLVSFTGSSEIGKIVGQQVQ ARFGKLLLELGGNNAIIVNEDADLNMVVPATVFAAVGTAGQRCTTTRRLIIHDKVYDQ VVERLKKAYAQFESRIGCPLDSNTIIGPLHNQQAVGKYKASIAEAIASGGKIEYGGKV LEREGNYVLPTIVTGLKHDDPVVLRETFAPILYVLKFSNLEEAIAINNEVDQGLSSSL FTTNIQNVFKWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWRQYM RRSTCTINYSKELPLAQGIKFE" gene <156849..>158728 /gene="Cre-cct-6" /locus_tag="CRE_04519" /db_xref="WormBase:WBGene00055574" mRNA join(<156849..156985,157033..157096,157144..157278, 157352..157524,157573..158288,158334..>158728) /gene="Cre-cct-6" /locus_tag="CRE_04519" /product="CRE-CCT-6 protein" /db_xref="WormBase:WBGene00055574" CDS join(156849..156985,157033..157096,157144..157278, 157352..157524,157573..158288,158334..158728) /gene="Cre-cct-6" /locus_tag="CRE_04519" /note="contains similarity to Pfam domain PF00118 TCP-1/cpn60 chaperonin family; contains similarity to Interpro domains IPR002194 (Chaperonin TCP-1, conserved site), IPR001844 (Chaperonin Cpn60), IPR002423 (Chaperonin Cpn60/TCP-1), IPR012722 (T-complex protein 1, zeta subunit); coded for by the following C. remanei cDNAs: DR781936" /codon_start=1 /product="CRE-CCT-6 protein" /protein_id="EFO86591.1" /db_xref="InterPro:IPR001844" /db_xref="InterPro:IPR002194" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR012722" /db_xref="PFAM:PF00118" /db_xref="WormBase:CRE04519" /db_xref="WormBase:WBGene00055574" /translation="MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTL KMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGEL LKQAESLVLEGLHPRLVTEGFEWANTKTLEFLEKFKKEVPVERDLLVEVCRTALRTKL HQKLADHITECVVDAVLAIQRDGEEPDLHMIEKMEMHHDSDMDTNLVRGLVLDHGSRH PDMPKHVRDAYILTCNVSLEYEKTEVNSGLFYKTAKEREALLAAEREFITRRVHKIIE LKKKVVDNSPDGKNKGFVVINQKGIDPPSLDLLAAEGILALRRAKRRNMERLQLAVGG EAVNSVDDLSPEDLGYAGLVYEHSLGEEKYTFIEECRAPKSVTLLIKGPNKHTITQIK DAIHDGLRAVFNTIVDKAVLPGAAAFEIAAYVMLKKEVETLKGRAKLGADAFAQALLV IPKTLAVNGGYDAQETLVKLIEEKTAAGPDLAIGLDLETGEAVEPQGIWDNVTVKKNS ISSATVLACNLLLVDEVMRAGMTNLKTPQPE" gene <159303..>173368 /gene="Cre-ddx-23" /locus_tag="CRE_04520" /db_xref="WormBase:WBGene00055575" mRNA join(<159303..161054,161078..161339,161408..161494, 172844..172920,173246..>173368) /gene="Cre-ddx-23" /locus_tag="CRE_04520" /product="CRE-DDX-23 protein" /db_xref="WormBase:WBGene00055575" CDS join(159303..161054,161078..161339,161408..161494, 172844..172920,173246..173368) /gene="Cre-ddx-23" /locus_tag="CRE_04520" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain); contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014014 (RNA helicase, DEAD-box type, Q motif), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal); coded for by the following C. remanei cDNAs: DY528979, EU179530" /codon_start=1 /product="CRE-DDX-23 protein" /protein_id="EFO86723.1" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00270" /db_xref="PFAM:PF00271" /db_xref="WormBase:CRE04520" /db_xref="WormBase:WBGene00055575" /translation="MAAEPPSLEELLEKKKQEENELAKVFGSFLYSGFSVLKQPDFQP KFLSKAERAALALKRREEEVAKIREAQKQAEDARKNWGRAEKPADDRKERDNGRLDRG GDRGMDRGGDRDRDRDRDRRRDRRDRSRSPRDRRRSRSRDRDGRRRDRSRSRDRRDRK DDRKRDRNDDSDQEDDTGKMADAVKDRYLGKQKEKKKRGRRLHEKKFVFDWDAGEDTS QDYNKLYQSRHEIQFFGRGSVAGMDVNAQKKEKNSFYQEMMEHRRTEDEKEQEKSRLE KELKKEKKVAHDDRHWRMKELSEMTDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFP SEVYQAVKEIGYMEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLP KMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLDIKTVSVIGGASREEQGMKL RMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYLPAS NMKKDTDEFDNEEALMKGFQTRQKYRQTVMFTATMSPAIERLARQYLRRPAVVHIGSA GKPTERVEQVCFFAYFIFIVYMVTSERKKKKLIDILMVETDRPIIIFVNQKRGADVLA KGLVSVNPEFRASVLHGGKGQEAREYALQSLKSGESKILVATDVAGRGIDIKDVALVI NYDMAKTIEDYTHRIGRTGRAGKHGKAITFLTQDDTAVFYDLKQVLLESPVSSCPPEL ANHEAAQGKPGQYTSKKRQDETLFLK" gene <174102..>176639 /gene="Cre-mdt-15" /locus_tag="CRE_04521" /db_xref="WormBase:WBGene00055578" mRNA join(<174102..174157,174203..174426,174478..174977, 175033..176484,176541..>176639) /gene="Cre-mdt-15" /locus_tag="CRE_04521" /product="CRE-MDT-15 protein" /db_xref="WormBase:WBGene00055578" CDS join(174102..174157,174203..174426,174478..174977, 175033..176484,176541..176639) /gene="Cre-mdt-15" /locus_tag="CRE_04521" /note="contains similarity to Pfam domain PF09606 ARC105 domain; coded for by the following C. remanei cDNAs: DY529626" /codon_start=1 /product="CRE-MDT-15 protein" /protein_id="EFO86819.1" /db_xref="PFAM:PF09606" /db_xref="WormBase:CRE04521" /db_xref="WormBase:WBGene00055578" /translation="MSEEDWPSPKFREHVIQRLEPELARNRQNAPNLPVPGDARQVEE YVFAKCMSKDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTAVLGGTTPVG STPGYRAPVPPDPQPTSAQARNPPSTVATTQASTTPSSQSTVPAGTVSASAAVAAAVA NFPSPDTALRVGGQTTPGSQSSGQSSAPNVPFPNGGPQQGSVPMNGGGGPAMGQPPPQ MGAPNMGMGGPPGGYGGYGMMNGPPGGGPMGSNPYNQQMKKEMEQNRPWDPQGHMYQQ PQWGGMPPQQGHGYPNRPMNGQQTTPTGTSSVLESLINQPQQYPGHHNQMGPPGPDRN MPGNRPGGGPGGPQRPGMPVNQAMMSVEDQNVYSMKLRNMRGSCESLRTRARQCRQEG NHEAAHKLEVMLSVLEGKRVVSLEYLNHLETWIARKQDFLNINQMAQNPNHMGMNDPV MNGDHGMMGNGQVHNPYGGHPGYNHGQYMGGPPPHMQQQMHQSQQMWHQQQQQQRMMQ PQDHMMMGGGGPMHGMYRGDMGHDQMTSPVNNHRHAPYQNPAMRNNMRQMPNGPGQIG RDRNSMSGSMSGPSSGAPSMNPMGTPNQKMGTPGSIGGLSGLDDFTYDDFLPNPIDAL QPTLHVGNPSNSMNSGQPVQRASLTETARKELQALEARFEIDPNHQRHDANHILVSCK LRNQPYPPLRLVVPTTYPAGSVTVDRAVIDLDAYLYDDLQNVVNERLSRPGLSSLTDY LNAWEEQVNQYLQQNQSNMDPSFGVSNDFFYENLNL" gene complement(<178477..>178602) /locus_tag="CRE_04706" /db_xref="WormBase:WBGene00055579" mRNA complement(join(<178477..178499,178551..>178602)) /locus_tag="CRE_04706" /product="hypothetical protein" /db_xref="WormBase:CRE04706" /db_xref="WormBase:WBGene00055579" CDS complement(join(178477..178499,178551..178602)) /locus_tag="CRE_04706" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86719.1" /db_xref="WormBase:CRE04706" /db_xref="WormBase:WBGene00055579" /translation="MEHVAIMSVAIVSDIGFIQPVSQA" gap 182073..182082 /estimated_length=10 gene complement(<187212..>190222) /gene="Cre-sma-4" /locus_tag="CRE_04707" /db_xref="WormBase:WBGene00055580" mRNA complement(join(<187212..187304,187393..187515, 187560..187661,187705..187873,188053..188180, 188229..188401,188451..188667,188714..188818, 188900..189040,189246..189632,190031..190105, 190151..>190222)) /gene="Cre-sma-4" /locus_tag="CRE_04707" /product="CRE-SMA-4 protein" /db_xref="WormBase:WBGene00055580" CDS complement(join(187212..187304,187393..187515, 187560..187661,187705..187873,188053..188180, 188229..188401,188451..188667,188714..188818, 188900..189040,189246..189632,190031..190105, 190151..190222)) /gene="Cre-sma-4" /locus_tag="CRE_04707" /note="contains similarity to Pfam domains PF03166 (MH2 domain), PF03165 (MH1 domain); contains similarity to Interpro domains IPR013019 (MAD homology, MH1), IPR001132 (SMAD domain, Dwarfin-type), IPR017855 (SMAD domain-like), IPR013790 (Dwarfin), IPR003619 (MAD homology 1, Dwarfin-type); coded for by the following C. remanei cDNAs: DY524832" /codon_start=1 /product="CRE-SMA-4 protein" /protein_id="EFO86775.1" /db_xref="InterPro:IPR001132" /db_xref="InterPro:IPR003619" /db_xref="InterPro:IPR013019" /db_xref="InterPro:IPR013790" /db_xref="InterPro:IPR017855" /db_xref="PFAM:PF03165" /db_xref="PFAM:PF03166" /db_xref="WormBase:CRE04707" /db_xref="WormBase:WBGene00055580" /translation="MTSQPSTSNPMYYDQLYGAEQMIQYTPMDYQTNLLCGMQYFNNS HNRYQFPVPIPHMSSPYTVSHHPPNLHNMHTTNSLDESPPFNGFIGTMLIPPPQIAYN NNSIFTPPPPPAPSQPSQPPQPTPQQQAQQAASSQPPPSQSVSHQTSSHSQNAGAVLT TAMDSCQQISHVLQCYQQGGEDSEFVRKAIESLVKKLKDKRIELDALITAVTSNGKQP TGCVTIQRSLDGRLQVAGRKGVPHVVYARIWRWPKVSKNELVKLVQCQTCADHPDNIC INPYHYERVVSNRITSADNTLHGGDIPMKNEYMGEQGMIDGSYGDWPSTPPDNNFNGG FPTSNVQHTSPQLPPLISDIPLDLTQIIVPTPSQPLDNWCSIIYYELDTQIGETFKVS ALDHGKVIVDGGMDPHGENEGRFCLGALSNVHRTDASEKARIHIGGGVELTAHANGNV SITSNCKIFVRSGYLDYTQGAEYSSKAHRFTPNEATFTVVFDIRWAYMQMLRRSESSN EAVRAQAAAVAGYAPMSVMPAIMPDSGVDRMRRDFCTIAISFVKAWGDIYQRKTIKET PCWIEVTLHRPLQLLDQLLKNSSQFGSS" gene complement(<197107..>198917) /locus_tag="CRE_04708" /db_xref="WormBase:WBGene00055581" mRNA complement(join(<197107..197269,197886..198046, 198148..198484,198703..>198917)) /locus_tag="CRE_04708" /product="hypothetical protein" /db_xref="WormBase:CRE04708" /db_xref="WormBase:WBGene00055581" CDS complement(join(197107..197269,197886..198046, 198148..198484,198703..198917)) /locus_tag="CRE_04708" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8Q7A3" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86830.1" /db_xref="WormBase:CRE04708" /db_xref="WormBase:WBGene00055581" /translation="MDLLDLYHAHDLSLATPDSYEVHFTKRKEEGEVKEEKEVLTSEN SSPDSKGKQKKTRIVPWEPYKAAVAPDKKGDACPEKLPELIAYAMNSKSEQNNNILMR KELIDGRKYRKSLEPMATSEREIELEREIDLLRKELNIEQKMNSELKRLMIATLSDEL QGQVEALTEDKVRLAYRVDEYMGKLMVEDEESDRLRIDRDVWKCKFLAQSIRCDELNS KNEYLLKTLVGVQHAVRTKNVTSDEVRDFVQLDLQPLFFRSPCEERVRPITAKYTNLT ISCCRNCSGRDIQLL" gene complement(<199060..>199823) /locus_tag="CRE_04709" /db_xref="WormBase:WBGene00055582" mRNA complement(join(<199060..199380,199425..>199823)) /locus_tag="CRE_04709" /product="hypothetical protein" /db_xref="WormBase:CRE04709" /db_xref="WormBase:WBGene00055582" CDS complement(join(199060..199380,199425..199823)) /locus_tag="CRE_04709" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86544.1" /db_xref="WormBase:CRE04709" /db_xref="WormBase:WBGene00055582" /translation="MFSGSIQKLETLTELDLIKLSNLGPRSLQHAQSVSSSSSTLMVF HRTYTETSPPPNSSNRLPYKSIRLANTQIVTEFIQYGELPTFKKQGCRSTNNPWRRYG ALRKLCETGGFAPNSGSRKERKNRDSLVAVKNVKLPPPPTSSQMTLNKVRDPGQYEIR LALKNPKNVTVDVAAQNLAEQVKVECERRENQYIFFLFFRHLFCIMDTSWSKMSNLFR MFKRNKLKFVPTNKYCISSCL" gene complement(<200191..>201942) /gene="Cre-him-10" /locus_tag="CRE_04710" /db_xref="WormBase:WBGene00055583" mRNA complement(join(<200191..200484,200530..200587, 200665..200970,201021..201572,201622..201776, 201829..>201942)) /gene="Cre-him-10" /locus_tag="CRE_04710" /product="CRE-HIM-10 protein" /db_xref="WormBase:WBGene00055583" CDS complement(join(200191..200484,200530..200587, 200665..200970,201021..201572,201622..201776, 201829..201942)) /gene="Cre-him-10" /locus_tag="CRE_04710" /note="contains similarity to Aspergillus oryzae Probable kinetochore protein nuf2.; SW:Q2UEA0; coded for by the following C. remanei cDNAs: DT937305" /codon_start=1 /product="CRE-HIM-10 protein" /protein_id="EFO86894.1" /db_xref="WormBase:CRE04710" /db_xref="WormBase:WBGene00055583" /translation="MSNAKSVVLVMFDPRKISTTLNQKLQVGVTPDNILNPTAEIVQQ IYLNFVRVVINISENSLHTLPLNADSDFDQELHKKSIPLAIVYQSMKAFIKDNSGGKL DLTMCDLVTPGKNPQRFRKLSSFLADFIKLDEIAAPIFNEISEEFSDQKVEMEALQEE IVAAEKRKDELVARQSQRRRRENELMDDHNKKKSELAGIINQYTEIGVKTEELEKQKN ELIRQIEETEKESITAKKTVELLNEEVLASPEELRQEMTERKKQIEDLKESIITAKQA LQDKLEARDICANADKNVPVIEQKIQAWAEEREDILDLMDEVDENLRKLSEMEEQLTF TTDKKSNHGKRMIEQAEMHEQLRREHLQRSEELNKNIEEITGQIAALGKNQPSVSRDI EEKRQELLALKNAYSEQLAKYRNSSRDSFNKFRKINALFNEVQRVSLEKKNAMDRAKN RLQNMLIGRLPSDYTFSTSSINDSENCDPISPIESDFSVFKN" gene <202178..>204004 /locus_tag="CRE_04522" /db_xref="WormBase:WBGene00055584" mRNA join(<202178..202246,202299..202325,202358..203351, 203976..>204004) /locus_tag="CRE_04522" /product="hypothetical protein" /db_xref="WormBase:CRE04522" /db_xref="WormBase:WBGene00055584" CDS join(202178..202246,202299..202325,202358..203351, 203976..204004) /locus_tag="CRE_04522" /note="contains similarity to Pfam domain PF00270 DEAD/DEAH box helicase; contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86550.1" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00270" /db_xref="WormBase:CRE04522" /db_xref="WormBase:WBGene00055584" /translation="MEKAIHKFPEWVSTKIVNFYNEQGIQHLFNWQGSEFNLQCANKC WEEYCGGAFRLDYRCQTLNHCNFSAWQVASTGKKVLFVLPYISVAREKLHQIQKCWRR DDIAVCGFIGPQASNPNEWIGAVCTIEKAGSLTNRALSEEWFHEIGMIVVDEMHMVFD SSRGAHIEHMLSKILLWNQQSEEKVRIVAMTATMPELRRIGEWLNNAHVYEASFRPIM LNNNIIIGSEMKEINGDNRVVRVFSEDPLINLAEESFRQNCQTLIMISSKLEAEKTAL SIAMKFQQLKLTDDSMMERLKERADGLLFIRNGLERHGCKDRNIMAALAWGISYHHAG LTIEERECIEMGFRDKNIIILVATSTLASVQEEFLPMT" gene complement(203726..203808) /locus_tag="CRE_32489" /db_xref="WormBase:WBGene00186897" tRNA complement(203726..203808) /locus_tag="CRE_32489" /product="tRNA-Gly" /db_xref="WormBase:CRE32489" /db_xref="WormBase:WBGene00186897" gene complement(<204441..>206222) /gene="Cre-ceh-10" /locus_tag="CRE_04711" /db_xref="WormBase:WBGene00055585" mRNA complement(join(<204441..204745,205073..205256, 205629..206069,206118..>206222)) /gene="Cre-ceh-10" /locus_tag="CRE_04711" /product="CRE-CEH-10 protein" /db_xref="WormBase:WBGene00055585" CDS complement(join(204441..204745,205073..205256, 205629..206069,206118..206222)) /gene="Cre-ceh-10" /locus_tag="CRE_04711" /note="contains similarity to Pfam domain PF00046 Homeobox domain; contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR001356 (Homeobox)" /codon_start=1 /product="CRE-CEH-10 protein" /protein_id="EFO86649.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="PFAM:PF00046" /db_xref="WormBase:CRE04711" /db_xref="WormBase:WBGene00055585" /translation="MAVEEMQLAASMQMNNQLSNSQRMSFAIHEILGIQGNAYLSHGY CPQGTFFPNQPNFMDISTCGVSGFDRPLCGTDGLGNIPTTAPLMYRMPTSTSDVLTVE PQTQVSSTSSSSSGGGVGSNSTGSGGGGKSSKRKKRRHRTIFTQYQIDELEKAFQDAH YPDVYAREVLAGKTELQEDRIQVWFQNRRAKWRKTEKTWGKSTIMAEYGLYGAMVRHS LPLPETITKSAETADPQQSAAPWLLGMHKKSMEAAAHLESVEKCDMSDSEEDEPPIRQ SIKTEYKSSNRERTQDHQLQQQQQQQQSLNFDAPLVDTSSLSQLHFQNTQMIPSNNSL KLYHDYTNSM" gene <206606..>208660 /locus_tag="CRE_04523" /db_xref="WormBase:WBGene00055586" mRNA join(<206606..206609,206660..206793,206988..207269, 207313..207546,207592..207661,207820..207958, 208582..>208660) /locus_tag="CRE_04523" /product="hypothetical protein" /db_xref="WormBase:CRE04523" /db_xref="WormBase:WBGene00055586" CDS join(206606..206609,206660..206793,206988..207269, 207313..207546,207592..207661,207820..207958, 208582..208660) /locus_tag="CRE_04523" /note="contains similarity to Brugia malayi Helicase conserved C-terminal domain containing protein.; TR:A8Q9T7" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86691.1" /db_xref="WormBase:CRE04523" /db_xref="WormBase:WBGene00055586" /translation="MRESYLITKKCDEEAVQKILETPIDQVIHTKNRDTDRTNLSRFV LEGICTGLTTTKTQIHQLCSLLFFSSENLNRCDDSIEMLLANSFISVEDEMFSPTQLG RAAIASSLPPEASLAIFEDLNSASRAIALDTELHMLYLVTPINVTVWQECDWHHLFAL FSKLPADHRRIAKLVGVSEKFILDQLQGRRNNKMLQVHIRFFSALALFDLINEMSIYQ VSHKYRIPRGCLQTLQSQSATYAAMIVAFCLRLGWTYLKALLDGFAMRLLFGIRSELS ELVTIEGIDGQSCEIIKVIESISNWKHDYKISVQVFD" gene complement(<208765..>209202) /locus_tag="CRE_04712" /db_xref="WormBase:WBGene00055587" mRNA complement(join(<208765..208899,208954..>209202)) /locus_tag="CRE_04712" /product="hypothetical protein" /db_xref="WormBase:CRE04712" /db_xref="WormBase:WBGene00055587" CDS complement(join(208765..208899,208954..209202)) /locus_tag="CRE_04712" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein); coded for by the following C. remanei cDNAs: DT936629, DT937360" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86537.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CRE04712" /db_xref="WormBase:WBGene00055587" /translation="MAQSVPPGDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGY GIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDRITVEWTNTPDGAA KQFRREWFQGDGMVRRKNLPIEYNP" gene <209608..>212733 /gene="Cre-polq-1" /locus_tag="CRE_04524" /db_xref="WormBase:WBGene00055588" mRNA join(<209608..209630,209718..210478,210523..210617, 210661..211098,211145..211837,211914..212505, 212552..>212733) /gene="Cre-polq-1" /locus_tag="CRE_04524" /product="CRE-POLQ-1 protein" /db_xref="WormBase:WBGene00055588" CDS join(209608..209630,209718..210478,210523..210617, 210661..211098,211145..211837,211914..212505, 212552..212733) /gene="Cre-polq-1" /locus_tag="CRE_04524" /note="contains similarity to Pfam domain PF00476 DNA polymerase family A; contains similarity to Interpro domains IPR001098 (DNA-directed DNA polymerase, family A), IPR002298 (DNA polymerase A)" /codon_start=1 /product="CRE-POLQ-1 protein" /protein_id="EFO86801.1" /db_xref="InterPro:IPR001098" /db_xref="InterPro:IPR002298" /db_xref="PFAM:PF00476" /db_xref="WormBase:CRE04524" /db_xref="WormBase:WBGene00055588" /translation="MPVWCWVLSNSNDGLGEWLFGEPRMRVSEAARLLKDRARTSLMR RVQELGITLELPKIEQEDKEEDDENENIQESCDSGLPDSFPDMDIVEDVEIVEEVTKS VTEMSLTDTISDDDLFKIEEDVFSIEKEDIDDSEIVEETVIECLETSLLKMKASKDEV FLRRLSQTFSPAGRRRSTLNGSFLEDSFDMPVPGSIPFTLKTPGREHKLILEEPKTAP PYLEDSFDRSVPGSVPIGFSKRKSILKSANRLDTSRRDSMNSNASENKSFDVFATPPT RQEKHRFIGKHCRVADSVDSPLSSFVSSPALKHPKLDPDKFRAEDICGSLNSWKTWMK SAASTSSCSISISDDQSGIAIRTDTGITFIPLSEEFDGGIHQNFKNNQSEIAAISPNP QCFESFSRCVIPLKTRIGCLNLLTESVEVFLMTMQTAFQLFQKFGIKISHVKILRIAA HLNNLIECETEVNGDMFTMLLERFPHNAATQEMYSFYLSSIFKSTVEVFAMKRIFDDL KVSAIQSSSEESFHLEMSSCQSVLNMFYTGISFDHSKCNSFITNTRQRIELLEEEIWR LAHGKFNIDSSNEVANVIFHRLGLIYPETSSCKMKQRHLPTNKLILEQMKNQHKIVGK ILEYRHIQHTLTQCLLPLSIYSTRIHCRMEMCTATGRILTTVPNLQNVPKRVSTEGLS ARQLFKASSGRILISADFKQLELRVLAHLSNDSKLIELICADRDLFGELSVEWNFSRD VVKQLCYGLIYGMGPKTLAELTKVKVAEAEKMLCSFFSMFPGLYLYLSNKGTYLYVTG VRSYINETKEHVSKEECVQTILGRKKFLKSGLTGEEKARVERVAVNYTIQGTASEIFK VAIVEIESKIKAYGARIVLTIHDEFLVECPENRTPVISEIIRDCMQSSLSDILRVPMK ISLKTGTTWGDLK" gene <212909..>217905 /locus_tag="CRE_04525" /db_xref="WormBase:WBGene00055589" mRNA join(<212909..213234,213572..213960,214012..214107, 214153..214705,214753..214967,215018..215124, 215169..215680,215730..215954,215987..216224, 216268..216393,216426..216588,216634..217168, 217216..217357,217427..217539,217589..217701, 217745..>217905) /locus_tag="CRE_04525" /product="hypothetical protein" /db_xref="WormBase:CRE04525" /db_xref="WormBase:WBGene00055589" CDS join(212909..213234,213572..213960,214012..214107, 214153..214705,214753..214967,215018..215124, 215169..215680,215730..215954,215987..216224, 216268..216393,216426..216588,216634..217168, 217216..217357,217427..217539,217589..217701, 217745..217905) /locus_tag="CRE_04525" /note="contains similarity to Pfam domains PF00136 (DNA polymerase family B), PF03104 (DNA polymerase family B, exonuclease domain); contains similarity to Interpro domains IPR006172 (DNA-directed DNA polymerase, family B), IPR006133 (DNA-directed DNA polymerase, family B, exonuclease), IPR006134 (DNA-directed DNA polymerase, family B, conserved region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86914.1" /db_xref="InterPro:IPR006133" /db_xref="InterPro:IPR006134" /db_xref="InterPro:IPR006172" /db_xref="PFAM:PF00136" /db_xref="PFAM:PF03104" /db_xref="WormBase:CRE04525" /db_xref="WormBase:WBGene00055589" /translation="MKFCIRNFVCEHSQEVPGPMDNIFSFKKNKIPVFHIYGVTDSGQ KACLHVHGVLPYLVLRVGGKLTPTVVAAMKAKINKGIEKEIETSTGNTKKYNADYVYK METFSSRSLYGYQDEEEYFVRVYFSSPWYLQKATHSLGKEVVDKPLFQPYEAHLPFHL QFFIDNSIFGMDNIHLNQVKFRICSEDPDDDVLYQNLTVGDVKKDDNLLSPYERKTNC HVECDALVTDILNLQMLADNVHSSNPGLEYIWREEKERCDALGIELKDVFNSYEPRKS TVWPQEREMLRTARKMAKRLRQERCMSEKLDDLMTTRIAETQTASTSDEASNVTIWER PDEKEDESMEVDETERRRSREKTPEELDEERQKEEDREEIPEDDENDPGVQEAEMTMI TDSQRAERGKNNDGVEGEDEEEDVMDLDDEDDDENEDEDEDEVDEDKTIENLEDVSSG EENNDEVIQWITTKSAFNQHFISMNENLYEAKKVDPKRQFSREMTACSTDSDGTVVAP AEHSQPLEQTKLLSQTSVDEPSSSEKSGESDIVGLCVASLELLVDTKMPMPNFVFDPI VSVSLAIYDDVCRESSPKLQVLLTNIPNGPSHFDRRVVFCETELEMLEEVVKYVVQFD VDVLVGYETLCLSWGYFLRRIKIIGTDLSMDRTKPEPFEEGQQKNEDEISVVPPKGRL LVSVWKVVRSDLKLRNYDLGNAVANVLRRKIPMIDNCTLMKRIRGNRSTVRNDVFLHL LKLSSVNISLLIEMNWFLKNAEMARVYGIQFHEVWTRGSQLRVESMLLRLAHRMNFVA PSITHLQRNIHLFRMGSPEQLQLILEPQSKVYFDPVIVLDFQSLYPSMVIAYNYCYST ILGKIANLVQMSNETKNREEIILGAIKYLPSKDDLVKLVAYKEVTASPLASMFVKKEK REGVLPLLLREVASSILAARIMVKNSMKRIKSKKLKRILDARQLALKLVANVSYGYTA ANWSGRMPCAELADAILGKGRETLERAIEMVQRGEYGGSEVIYGDTDSMFVLVRGASV EEAFEIGRRIAEDVTNANPDPVVLKLEKVYKGCVLETKKRYAGWMYEHENDEGSLDAK GIETVRRDTCPIVSEVLEKSLGLIFSQNWKTLITYLNTMVLSLPNENFSKFVFCKEYR GDYSQKALVPQKKLAESRLRRCPSHITLRGERVPYVIIDGVSGSTVYSCVRSIESFTR NPEYKINTYYYLNAHILAALRRVTDLIPMKIDFLPLASDQCFVTDCARIGKTPWCIEC ETNPEELALSLIQFGRENRARSQIRQICGICQSSTNQITEEQVLECTNFSCLLRQTLS IMNRANTESVIMSHTLF" gene 213471..213541 /locus_tag="CRE_32391" /db_xref="WormBase:WBGene00186799" tRNA 213471..213541 /locus_tag="CRE_32391" /product="tRNA-Gly" /db_xref="WormBase:CRE32391" /db_xref="WormBase:WBGene00186799" gene complement(<218144..>220007) /locus_tag="CRE_04713" /db_xref="WormBase:WBGene00055590" mRNA complement(join(<218144..218597,218645..218772, 218824..218946,218994..219122,219169..219294, 219339..219661,219712..219759,219806..219844, 219890..>220007)) /locus_tag="CRE_04713" /product="hypothetical protein" /db_xref="WormBase:CRE04713" /db_xref="WormBase:WBGene00055590" CDS complement(join(218144..218597,218645..218772, 218824..218946,218994..219122,219169..219294, 219339..219661,219712..219759,219806..219844, 219890..220007)) /locus_tag="CRE_04713" /note="contains similarity to Pfam domain PF05075 Protein of unknown function (DUF684); contains similarity to Interpro domain IPR007767 (Protein of unknown function DUF684)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86820.1" /db_xref="InterPro:IPR007767" /db_xref="PFAM:PF05075" /db_xref="WormBase:CRE04713" /db_xref="WormBase:WBGene00055590" /translation="MADPINLHEDEQPFELSPFILAIMKIAREEGDYISEQTLRELEE KVTPEIVPHKHAALVASPKRIEITQEHLDTVKKVVDVVKVMVKVGSFLSEKVGKYIGP IGTVAGVVKDIVEYFEPKKDDPVLTELGELKKQLTAVSKCLLMSQSNISLQLSQKMTA HFDDLKSFVVEQDFYNRYTISISTLYEYMLDTLTERTNESVKLFEEVYGKNKPQQLVY DMLIKLELEAANPLKWAMKGDNLQSKETFNKWKNILESVLTEALFLEIYASGLLQGVG SHGVNRILEKIARYDELVKQWNEHYLTTEDFWPKGVETLVNEVHENRNLTSKDDKIEV LWKGIESIHTNFKFYAAVFPRDHIWHHYKHYESQAIVSDREGFVIVVYRSKVKEPYVR DRAFLRRCVERDDLRQRHTQSWQFNHWQIVRNYYNDYPIVENSAKFYGTFHLVVAQSK SIIASRYSETENSPCGPGYITYDAELEVFDGFTRSTFPLFLLHGL" gene complement(<222530..>224391) /locus_tag="CRE_04714" /db_xref="WormBase:WBGene00055591" mRNA complement(join(<222530..222968,223022..223149, 223197..223319,223368..223496,223543..223668, 223717..223785,223833..224041,224091..224135, 224185..224223,224268..>224391)) /locus_tag="CRE_04714" /product="hypothetical protein" /db_xref="WormBase:CRE04714" /db_xref="WormBase:WBGene00055591" CDS complement(join(222530..222968,223022..223149, 223197..223319,223368..223496,223543..223668, 223717..223785,223833..224041,224091..224135, 224185..224223,224268..224391)) /locus_tag="CRE_04714" /note="contains similarity to Pfam domain PF05075 Protein of unknown function (DUF684); contains similarity to Interpro domain IPR007767 (Protein of unknown function DUF684)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86543.1" /db_xref="InterPro:IPR007767" /db_xref="PFAM:PF05075" /db_xref="WormBase:CRE04714" /db_xref="WormBase:WBGene00055591" /translation="MSESENVESKDVENPIKLSPFLVTITKIAMEEGDYISHQTLTEL EEMVTPNKIPQKKGHVVVRLGFEITNDQLDTVKKVISVVKDCLEIGGFISEKLGKFLG PIGAVAGLVSDLIDLFEPEKEDPVMKELGELKKQLTALSQKMTAHFDDLKSFIVEQNF YDKYTTSLTKLYMYMLDTLTHRTKESVKTFEEIYRKNKPQELVYEMLAKLEQDSTNPL RWAMKGDHLQSKATFQKWKNILEGAISEALFLETYASGLLPDVGKHGINMILEKIGRF QEIVKKWDDYYLNTDDFWPKGVQKLVDEVHENKSLSSKNDKIDEIWKGILSIHTNFKF YVVVVSTDHIVRYYKHYEDQAITSSREGFHIMVYRSARKQARDKRWLDQYMFENMEES RSETFQFDHWQIVRNHLSQDNIDKIGKYLGTFYFVVGQSSNHIASKFSIMDGSDGPGC FTFSATLECSDGFSSTTASLFKLYGN" gene complement(<225031..>228161) /gene="Cre-cutl-23" /locus_tag="CRE_04715" /db_xref="WormBase:WBGene00055592" mRNA complement(join(<225031..225100,225154..225347, 225396..225582,225631..225709,225763..225839, 225887..226068,226173..226644,226691..226992, 227042..227127,227180..227498,227562..227712, 227785..227867,227914..227993,228038..>228161)) /gene="Cre-cutl-23" /locus_tag="CRE_04715" /product="CRE-CUTL-23 protein" /db_xref="WormBase:WBGene00055592" CDS complement(join(225031..225100,225154..225347, 225396..225582,225631..225709,225763..225839, 225887..226068,226173..226644,226691..226992, 227042..227127,227180..227498,227562..227712, 227785..227867,227914..227993,228038..228161)) /gene="Cre-cutl-23" /locus_tag="CRE_04715" /note="contains similarity to Pfam domains PF00100 (Zona pellucida-like domain), PF00092 (von Willebrand factor type A domain) (2)contains similarity to Interpro domains IPR001507 (Endoglin/CD105 antigen), IPR002035 (von Willebrand factor, type A)" /codon_start=1 /product="CRE-CUTL-23 protein" /protein_id="EFO86842.1" /db_xref="InterPro:IPR001507" /db_xref="InterPro:IPR002035" /db_xref="PFAM:PF00092" /db_xref="PFAM:PF00100" /db_xref="WormBase:CRE04715" /db_xref="WormBase:WBGene00055592" /translation="MRRLVAIPLLILTVTFQAEAVKIIDNGLAPPEIVHTPVSTKPRC KVFAPPLDLIFILDSSGSLRDKFQDEIDIIRRILKHVTIGKSATRVMLIQFSGTQHLE FNFEKFTDREELLAALDVLRHVSGITRIGGAFEFALQQLKSPGSGLRDGSVPKIVYLL SDGRTHDYPKDWQMSDVLRRFLIYYHDFKYRNFSREIPNIDIWAYGTGDYVAMAALAN YTQSEQKIVTNQNLQKLEPQFEKYHGTEICEQQPTCVKGSDKPLDLALVVDASESLDH LFSDQKKFLVERVLGNINIHPEAVRVALITYSGQAFVHFKFNSFLYGNNTSVQGFVKN IRSIKGTTATNVALMDAFDLLTSKDPSTGVREGVPKMALVLTDGHSHKSPKAISEKMR AAGIIMIAVSVTPRPLVDEAELRLIAGDDKRAFTPPNLHVIPFLLDHLTFSFFQDFES EFMKYVGFGCDGIELPPDAKPQVRGATDVKCTEHSMSIVVRTQRALQGVMYAHMYHDE PECMIRKTDNSREIQMTFMEGKCGLVKTPTADGHGYHFNITVILQFHPLIITRADQGL DMSCFVPSAVPRQELDRAVFKNAADTQCVYRLHRYSPGQCVALDAKVGETLYHRWECD SPPEYNYLVHDCFVESEKHNQQILDANGCEVDQHFLETPNYSRFKDYPEDSYVFQEMS VFKFPGDGDLLFHCKISLCNMNDPNAPCNQSIPPKCPKKVPVLPVRQKRSTSSDQWMS AEWRSKQIRKRQIELKNRSRRQIVETKPGYYMTLQVETRTLNVLLSESIRPRDSVKYC DIS" gene complement(228371..228452) /locus_tag="CRE_32310" /db_xref="WormBase:WBGene00186718" tRNA complement(228371..228452) /locus_tag="CRE_32310" /product="tRNA-Leu" /db_xref="WormBase:CRE32310" /db_xref="WormBase:WBGene00186718" gene complement(<232398..>240871) /gene="Cre-ida-1" /locus_tag="CRE_04716" /db_xref="WormBase:WBGene00055593" mRNA complement(join(<232398..232489,232895..233412, 233458..233548,233729..233864,233918..234226, 234410..234480,234553..235173,235555..235838, 235885..236044,240805..>240871)) /gene="Cre-ida-1" /locus_tag="CRE_04716" /product="CRE-IDA-1 protein" /db_xref="WormBase:WBGene00055593" CDS complement(join(232398..232489,232895..233412, 233458..233548,233729..233864,233918..234226, 234410..234480,234553..235173,235555..235838, 235885..236044,240805..240871)) /gene="Cre-ida-1" /locus_tag="CRE_04716" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000209 (Peptidase S8 and S53, subtilisin, kexin, sedolisin), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)" /codon_start=1 /product="CRE-IDA-1 protein" /protein_id="EFO86750.1" /db_xref="InterPro:IPR000209" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CRE04716" /db_xref="WormBase:WBGene00055593" /translation="MRFFHFILVLFSISTVPAFLLYGCNLSENLCDNDELCYPDGVFG QCYSSESGSPEPTVLDNLDDTQLELLKLELTRLATKDKDWGDEETQCVLAYFKMSMFY QLQYDPDFCQVRKPANVWALIQLIDTGLSEDPSILEEDENPENVTEEEMAQIIEQLKE PSLPTEEDVEEALNAQNEDVDDEILDQYVQAVVNNENPDFSELSDGQLNSLIGRLVDL KKNVENEESELLSGNGEQEMAVPLDDLEERGEQAILKKDIEQVGEVNQGLDNTEHKIV KGRKDQIVTRVDANRVYLKVHLKNEDQLMPLIEFLQNTIAIPNNLYFDDFQYVLFFTF TIRIVPNFRFENGQLSMRISRFEGAKPKAEKRIDSVEGVASAVYKRRKDIARLSGADV RETGIGSGEDGSLPVESSERDWLLMPVLFVCAFTVTALGLVAAVQIARSRRHYKDNIQ QIAEQLDGKTSFAYQDLCRQRADGGRASKSSSTSSWCEETAAPTIDISTGHVVLNFLQ EYLSEPTKIEAQWNGIKDYHNEERTKSKAENNSTQNRTILPFDDNIVDIDGKTNENED FYLNASFIYDDDPRQAVYIAAQTPASNQIAAFWQTIWQHGVCLVVNLSTPEECKQEKN YWPDTGSEVHGAFEIHLVSEHIWSDDYLVRSFYLKNLQNSQTRTITQFHYLSWQKDST PTSAKSILEFRRKVNKSYRGRSSAVLVHSWDGSGRTGVYCAVDVLCARLLRGIRQIDV VATVEHLRDQRDGMVATGDQFKLVYGCVAQEVNHLLKSISAQ" gene complement(234265..234335) /locus_tag="CRE_31783" /db_xref="WormBase:WBGene00186191" tRNA complement(234265..234335) /locus_tag="CRE_31783" /product="tRNA-Gly" /db_xref="WormBase:CRE31783" /db_xref="WormBase:WBGene00186191" gene complement(235229..235299) /locus_tag="CRE_31934" /db_xref="WormBase:WBGene00186342" tRNA complement(235229..235299) /locus_tag="CRE_31934" /product="tRNA-Gly" /db_xref="WormBase:CRE31934" /db_xref="WormBase:WBGene00186342" gene 235458..235528 /locus_tag="CRE_32267" /db_xref="WormBase:WBGene00186675" tRNA 235458..235528 /locus_tag="CRE_32267" /product="tRNA-Gly" /db_xref="WormBase:CRE32267" /db_xref="WormBase:WBGene00186675" gene complement(<242960..>247900) /locus_tag="CRE_04717" /db_xref="WormBase:WBGene00055594" mRNA complement(join(<242960..243040,244317..244392, 244867..244954,245000..245132,246938..247171, 247231..247561,247626..247759,247805..>247900)) /locus_tag="CRE_04717" /product="hypothetical protein" /db_xref="WormBase:CRE04717" /db_xref="WormBase:WBGene00055594" CDS complement(join(242960..243040,244317..244392, 244867..244954,245000..245132,246938..247171, 247231..247561,247626..247759,247805..247900)) /locus_tag="CRE_04717" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86776.1" /db_xref="WormBase:CRE04717" /db_xref="WormBase:WBGene00055594" /translation="MTNIFENCSYYSIYELYLLDCTNTTDQCSLIQYVDTIQSLTFWL DLVIPFILLTIAWFLNLYFLIILIPKYIRMNDVTKKQYVFVVSRGISSLSAASAMLFI RCVEVLSVDFTIYFLFFMIDDLSFYTLLGKSPCFRQLQNLSGSYVGSAVLLYLATVRP IFYSLRISVRTVYFLAAGNIIGSILLSATTAVFQAAVQSEGPFKCDVEHCQPIINIVM CKKTHKKYKNKQNEILVSIIAISFIIPIITLSFVLVTLYCYKNRAESIGSFTADASAY DSARTRLAWTLFTFTLISLSEAIPASYMVGIKVDGSITTCVNFYQADHLIVPAIMNSF QGLAWSIALIVDPLCGLLFDPRIQKVWVQHINPNLVSDSLYLIFELLLKNGTEDIE" gap 245166..245845 /estimated_length=680 gene complement(<248210..>249374) /locus_tag="CRE_04718" /db_xref="WormBase:WBGene00055595" mRNA complement(join(<248210..248523,248598..248798, 248963..>249374)) /locus_tag="CRE_04718" /product="hypothetical protein" /db_xref="WormBase:CRE04718" /db_xref="WormBase:WBGene00055595" CDS complement(join(248210..248523,248598..248798, 248963..249374)) /locus_tag="CRE_04718" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86683.1" /db_xref="WormBase:CRE04718" /db_xref="WormBase:WBGene00055595" /translation="MPDGGLFSNCSEHYPFENYFVNCTNTTRPCELIHDFAIVAQLLS ILDFYISSVLFLLTGILNVYFLWITVPLYLSFNDETKKRYIFVISRCISSISAAVTLL ILRCILYVYFPPETSNYYLYAIVIIADDISFYSLQGSYIGMATLLYIGVIHPVYFSTR LTLRKIKIFAGINVIIAALISFPCGALQTATYVPGPIECGSQHCVIVVSTAFALTIMI LSFVFICLSFHIHQAKKLGNYVSSQTLHHARIGLGWTLTAIIVISLAEGIPSSFLIGL KADSVLNTCNNFYQADRLVNVTVFTSIDSIVW" gene <250298..>250816 /locus_tag="CRE_04526" /db_xref="WormBase:WBGene00055596" mRNA <250298..>250816 /locus_tag="CRE_04526" /product="hypothetical protein" /db_xref="WormBase:CRE04526" /db_xref="WormBase:WBGene00055596" CDS 250298..250816 /locus_tag="CRE_04526" /note="contains similarity to Interpro domain IPR015706 (RNA-directed DNA polymerase (reverse transcriptase), related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86557.1" /db_xref="InterPro:IPR015706" /db_xref="WormBase:CRE04526" /db_xref="WormBase:WBGene00055596" /translation="MEVFIRCYIIYIRPILEYGCTIFSPYLKLHIRKIESIQKSFVHR IFKKFGIEYTSYFNALDICGLDSLELRRLVFDLVFIYKSIISREIYCANALFTFIPSV KSLRRHPFYLRCNIKNSNKSSSQFLSNRTLNCWNSLPVSSFPVKSSSRSFKANLKHVD LSKYLTLSPLNY" gene complement(<253631..>255589) /locus_tag="CRE_04719" /db_xref="WormBase:WBGene00055597" mRNA complement(join(<253631..253693,253741..253816, 253861..254078,254128..254219,254266..254362, 254415..254545,255020..255398,255491..>255589)) /locus_tag="CRE_04719" /product="hypothetical protein" /db_xref="WormBase:CRE04719" /db_xref="WormBase:WBGene00055597" CDS complement(join(253631..253693,253741..253816, 253861..254078,254128..254219,254266..254362, 254415..254545,255020..255398,255491..255589)) /locus_tag="CRE_04719" /note="contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86852.1" /db_xref="InterPro:IPR017452" /db_xref="WormBase:CRE04719" /db_xref="WormBase:WBGene00055597" /translation="MNHSLFENCSYHYPNEVSFENCTLTSAPCTLIQKNCFFPDVNSL ITRNCRLIIQSFQDLNTAISVIFYEYYVTISLFSVAALANCYCLCVTVPLFFEMEEKS KKRYIFLLTRCLSCICMVFSMILSTCVFEQILTPSPSNFFIYAILNIVSNTSMFGLLG SYVGLALLLYIGVMYPMIFKTQISLRFVYLMVSSIYLVSLLISIPIGIFQAAIQSPGG LINCSQKTCVPWVNLIQFIISGICLIFTIAILFFVFISLVRHNQKLKRTDTLSSSASS MKRVRRRLGWAIIAVTFISAAQIIPYLFLLDVVPHDIDICNGFYKSNKFMGEAIAGFA ESLVWIFVFLFDPIANIFCDKKMSERVKNQFETLKDRMPNAALASSLFPR" gene complement(<255916..>257404) /locus_tag="CRE_04720" /db_xref="WormBase:WBGene00055598" mRNA complement(join(<255916..256065,256158..256321, 256366..256584,256632..256901,256943..257249, 257297..>257404)) /locus_tag="CRE_04720" /product="hypothetical protein" /db_xref="WormBase:CRE04720" /db_xref="WormBase:WBGene00055598" CDS complement(join(255916..256065,256158..256321, 256366..256584,256632..256901,256943..257249, 257297..257404)) /locus_tag="CRE_04720" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86873.1" /db_xref="WormBase:CRE04720" /db_xref="WormBase:WBGene00055598" /translation="MTQQLSSIFSNCSQHYDLEIIFEFCVNATDPCKSIQQIETAVTI AYVDYYSSVTLFSVAGLMNIYCLLVIIPLYRRMQNDSKKKYIFLITRCIAGLLAAISW LLIQCIYLRFIAPTAGNFPYYVMALALNIGSIYGLLGSYVGMAGILYLGVLNPVAYNQ HLTLRIVYVAVSIIFLMSIVLAVSENSEIIVSTFQFKIPFAILQAAIAIPVSVKCTPE KCAPLIATMNFVLVFGSLIITIVILLFALISLLRHRKKFKKQDTVSNTNLNSAIRLLT WTLVTVLFVLIAEIIPFVFMEIKKHRGPKPGCYWFYHANIIVEQVSFAMIEAAVWSIA LIIDPSANVIFDRNVSKQAKSQVKWMRNLFVGLARTITRRFSPKRGKEEEESVNREPT TQSELIILSHESS" gene <257808..>260719 /locus_tag="CRE_04527" /db_xref="WormBase:WBGene00055599" mRNA join(<257808..257903,257951..258142,258499..259076, 259124..259216,259261..>260719) /locus_tag="CRE_04527" /product="hypothetical protein" /db_xref="WormBase:CRE04527" /db_xref="WormBase:WBGene00055599" CDS join(257808..257903,257951..258142,258499..259076, 259124..259216,259261..260719) /locus_tag="CRE_04527" /note="contains similarity to Candida albicans Flocculin-like protein.; TR:Q59SG9" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86603.1" /db_xref="WormBase:CRE04527" /db_xref="WormBase:WBGene00055599" /translation="MKLTKFVSNCNQSRYRNSNQSKNMENDRSTDKINEDDAPMSEDD TVYVSASDQPGQITINLEKDMKRKITIISEVEKPKRPRRGSVDLRRQVIVNNIDETLS IRLPTHLSNKSVFGGRSKVASESIQLPSPLFILTEQQVVGASEKKTVQFVTKILLTSH KLSIDDRKKLYAELVEAEYVGTSRSSSDLSQSSDDEPEEDFQLKMYYSSKGIYIHSVQ NVHKIRNGKSSKITEEKSYSNICKTKIVGDLGKSVEGFLNVTCSETVSVTNQNYTRSE HFKIGLKDSSVFGNVPISALKTTFDPTKTISFNEFVFFDNKNIGIDIRHESTARMEKM WNHEVGSFGEEQSEYREVNFFFDDGKTGKDQKKTAGATVSSVVQTPKKSTENSSKSSD VSSNQSVSSSNSSASGSSISSKRAKFRTKRQKTMKKKKSDTSLKKTTKSPDRESSRKS IRPDEEPLRLSSIKSTDQRNSTVNESFYHSFPAATSTPKSPKSPLNSSTILQSNIKSA SKTTPNKSPLRHGSIPIKVQGEKHSDNEIDLDKSLSSKKPIASKNLARIVESQKKKEE GISSKPPASPGNSVYMYSTGNANNSTYMTAKDLQDSRISSSSSAPKSLISPRGTLRVK ETKVTREVRQEEGKPDEVNEKKEETVKEEKVKLDKKSRSISPATPKLKNTLNQNMVTL STGIHSLSFFLLNSKFSVKETHQTLDVIPIKVSDVSSPSINSSIVSGQKAFKEEVQLD IMIDKKRLVLNVNFMLLAEKQPEVEIIGFSFKGNKLWEKSSEWNLSSANTTSHVSFIL LKRYRIV" gap 258166..258432 /estimated_length=267 gene complement(<260954..>261243) /locus_tag="CRE_04721" /db_xref="WormBase:WBGene00055600" mRNA complement(join(<260954..261030,261069..>261243)) /locus_tag="CRE_04721" /product="hypothetical protein" /db_xref="WormBase:CRE04721" /db_xref="WormBase:WBGene00055600" CDS complement(join(260954..261030,261069..261243)) /locus_tag="CRE_04721" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86916.1" /db_xref="WormBase:CRE04721" /db_xref="WormBase:WBGene00055600" /translation="MTGCFWFYHASKVIGEAAFSLTESSLWSIALIIDPLTNVILDRT VSKQAVRQVIVEVESKMDAQKLCRTGEECDSKGFKEKYR" gene complement(<261283..>264004) /locus_tag="CRE_04722" /db_xref="WormBase:WBGene00078751" mRNA complement(join(<261283..261515,261562..261655, 261700..261830,261875..262181,262609..262710, 262752..262915,262968..263186,263233..263326, 263373..263503,263548..263854,263897..>264004)) /locus_tag="CRE_04722" /product="hypothetical protein" /db_xref="WormBase:CRE04722" /db_xref="WormBase:WBGene00078751" CDS complement(join(261283..261515,261562..261655, 261700..261830,261875..262181,262609..262710, 262752..262915,262968..263186,263233..263326, 263373..263503,263548..263854,263897..264004)) /locus_tag="CRE_04722" /note="contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86799.1" /db_xref="InterPro:IPR017452" /db_xref="WormBase:CRE04722" /db_xref="WormBase:WBGene00078751" /translation="MTNQHASIFSNCSVHYDLEVNFEICVEATDPCYSIEQIETAVTI SFVDYCSSVTLFPLAGFMNIYCLLVILPIYHRLQNNSKKKYIFLITRCIAGLLAVTAW LLLQCVYLRSMTPNTGDSAGYVLALSLYIGSTYVLLGSYVGMAGVLYLGVMNPVGFNQ YLTLRLTYIAVCVIFIFALILSIPLAILQAAIAIPISIKCRDKTCAPVVTLINFILVS GSLIITTITLSFVLISLLNHRNAFKRLDTMSNASLNSGIRLLIWTLFVVILITIAEII PFTFMEIRRSEGTITGCYWFYHAGKVIVEAIFALIESSIWSVALIVDPLTNLILDRTV SRQAASQVKWIQRSCERLVIFVIGKFSRRKKIWEEDEEEEKQIETAVTIAYVDYYSSV TLFSVAGLMNIYCLLVIIPLYRRMQNDSKKKYIFLITRCIAGLLAVVSWLLIQCIYLR FIAPTAGNFPYYVLALTLYIGSTYVLLGSYVGMAGILYLGVLNPISFHQHITLRLVYA AVCIFFLVALSLSIPLATFEAAMAIPVTIKCTDKSCAPLVTLLNFVLVLGSLITAATT ILFVLISLLRHRKEFKKQDTVSNTNLNSAIRLLTWTLFALFLISIAEIIPFVFMEVKK HGKQF" gene complement(<264228..>269064) /locus_tag="CRE_04723" /db_xref="WormBase:WBGene00055601" mRNA complement(join(<264228..264439,264494..264712, 264882..264975,265021..265151,265198..265370, 265414..265547,265893..265968,266015..266099, 266146..266272,266318..266409,266452..266545, 266593..266723,266771..266940,267161..267291, 267591..267748,267909..268145,268197..268293, 268338..268468,268549..268712,268817..>269064)) /locus_tag="CRE_04723" /product="hypothetical protein" /db_xref="WormBase:CRE04723" /db_xref="WormBase:WBGene00055601" CDS complement(join(264228..264439,264494..264712, 264882..264975,265021..265151,265198..265370, 265414..265547,265893..265968,266015..266099, 266146..266272,266318..266409,266452..266545, 266593..266723,266771..266940,267161..267291, 267591..267748,267909..268145,268197..268293, 268338..268468,268549..268712,268817..269064)) /locus_tag="CRE_04723" /note="contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family); contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86628.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="PFAM:PF00001" /db_xref="WormBase:CRE04723" /db_xref="WormBase:WBGene00055601" /translation="MSHSISPNPFDNCPGYYLPDFYPYKSCTNISNFCEHAKDIYNIE MLLRWAIFVIPCCLSFFAFFLNIYIFYVLIPNLRRMNNRAKKKYVFVLSRAISSTMSI ISIFLLPTMIFLTHFNFWVIALFIIFEMLSFLSLLGGIAGTTLTIYLAVVHPVYYQRE MSLRKCVILVFSFWISAVTVAIGCGVVEAAFVGKYAPFLCDYKSCAEPVLIFGIVCIS VAFTLCLGTQSFVIFSLWRHERRSNKRGDYSSTQKAMTGVKRKLFGGFFAFGTMAVFE IASAIMLVKSVSSQNQDMNPCSMLQTSGDRLQFVISCVILTLVWTIGLFIDPIFTLSF DPLFSETVTRHNMHTAMEIFDWLFYSATILFTLSGFLNIYCLVSASYTFYYLNNEIRK HYVFVLSRCFSSIICVFSLLITESALYTDAISSSFTFYAIGFSFYNFSMDSLLLSYMM ISLLTYFGVVHSSFYRSNVTLRSLYFTLGIIWGFSLSLAIPLSLYQAAANSPGPIECD LHYCLKVVEWITFSFACICLLLNVLLTGFVVISLYWHNFKARKNGIEVPEVTSRARVR LTFTFFALVIVCFVELFPFGILIGFDQSGLQKCESFYQSDKLLIQVIISSVETFLGSL VFVADPLINICFDKNILQTVKLQDISISHSIRLWMGFYIPSVICFLAILVDIYCLVIT TFLLRSLNQQTRKRYVFVLVRLSSAILVAICIILVQSTNALDAPFQDSYTYYAIFFVV YDFSIFSLLGSFTGVAVITYFGVMRPLFYRDRLTPKVMYWVAAGICIVSACISIPIGL FQAADSADGPIRCDSTSCQVIVKWLLFSISCVILIGATSTLLFVTISLYWHNYKSKKM GNLTSSASDHGRARLAWTTAVLIILSCVELIPTGLLLAYGKLSLSDDCDNFYRANELL VPTIISSLETFIGFLLRKSTKISVGISDQSRFYSILSLIFSLIDTFQNTFLTR" gene <269122..>270051 /locus_tag="CRE_04528" /db_xref="WormBase:WBGene00055603" mRNA join(<269122..269337,269436..269648,269696..269785, 269830..>270051) /locus_tag="CRE_04528" /product="hypothetical protein" /db_xref="WormBase:CRE04528" /db_xref="WormBase:WBGene00055603" CDS join(269122..269337,269436..269648,269696..269785, 269830..270051) /locus_tag="CRE_04528" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86840.1" /db_xref="WormBase:CRE04528" /db_xref="WormBase:WBGene00055603" /translation="MIEKTVLTDKRRGKRIGSEIMFYEEVITERELLGKKEYENKKRE NYKRASHCVFYQKAMDNTSYVSVNLTSEMKKRNESTTEDETEQEPPRKAAGFEWAAEP DEMLFPCCATKFVMLGIATVLVVVAILNWILSHWCSSFVWLTLSTLFMGLIIFLPEYF SNIINFAVNFCVWVAFIIFEIVITIQAAQESGEDHYDKKYKSRLTAAIILGCIEIILA IAVVILLFRMLYYYYQNRGDEQIMAVAA" gene <270360..>271175 /locus_tag="CRE_04529" /db_xref="WormBase:WBGene00055604" mRNA join(<270360..270428,270480..>271175) /locus_tag="CRE_04529" /product="hypothetical protein" /db_xref="WormBase:CRE04529" /db_xref="WormBase:WBGene00055604" CDS join(270360..270428,270480..271175) /locus_tag="CRE_04529" /note="contains similarity to Arabidopsis thaliana Extensin protein-like.; TR:Q9LJ64" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86740.1" /db_xref="WormBase:CRE04529" /db_xref="WormBase:WBGene00055604" /translation="MGCCQSKKARNQSTSSATRREPVPRHYPKGPPPSYEQTMKNKPS KRSAESIDPRIQNEKNQEREGNMIKKEKEDKQVEKEKSVEQPVENEAETKLKENRDED ETPNPSPAPPTTASGPSASAAPEPVQNQQKSNSESKKKTRESSKPVSTLLTSHNTFHI FQSSSRPAPPPIPPRRPPPSSGRPPPPPPPRHRPPPPPGYRPPYYGPPPPVIVGPPPV IMSPYPYYYDTVVFDPFYDGYYGGYGCDGYDFGFYF" gene complement(<271391..>273230) /locus_tag="CRE_04724" /db_xref="WormBase:WBGene00055605" mRNA complement(join(<271391..271557,271602..272307, 272354..272998,273046..273127,273175..>273230)) /locus_tag="CRE_04724" /product="hypothetical protein" /db_xref="WormBase:CRE04724" /db_xref="WormBase:WBGene00055605" CDS complement(join(271391..271557,271602..272307, 272354..272998,273046..273127,273175..273230)) /locus_tag="CRE_04724" /note="contains similarity to Pfam domain PF00057 Low-density lipoprotein receptor domain class A; contains similarity to Interpro domain IPR002172 (Low density lipoprotein-receptor, class A, cysteine-rich); coded for by the following C. remanei cDNAs: DR779381, DR780092, DT936601, DR408377, DY528680, DR778562, DR776514, DT936496, DT934630, DR776825, DY528898, DY526882" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86538.1" /db_xref="InterPro:IPR002172" /db_xref="PFAM:PF00057" /db_xref="WormBase:CRE04724" /db_xref="WormBase:WBGene00055605" /translation="MSQQPGSDRRVNFAQEEPMTLGEKISHRMDQFKEMVSSGCCSCA SRCPSVAIVLILALVILGILAAIPLTLMLTSSAQRMSTDSTDLSPYSIRHPKFWPKTD KIHFNDLDGIPMSSLFPPNVSTCSGFGFACTGAVHMIIPSSKRCDGIKDCQDGSDEEN CKECQSVFSCRSHVEEDSKTKRKTKVLPTLICLTAEKLCNDVQDCPDGSDESVCKSTC SKDQFKCTGNNACLPTSAKCDGVNDCTDGSDEKNCNECQKGAHKCGKQCIKASHVCDG VAQCADRSDEKECDCKSCSGSDKALCEDGTCIKRTQVCDGKKDCTDGMDEENCPGSCS IEAFSTKTKQLTCSDEKRYTESEACSGVVEACEQSCPKCHPKLTFTCPAVGGSQKRCI RRSKVCDGINDCDDGADEKNCTPIKECGIENASQFTCDRKCLDASRRCDGVWDCEDKS DEQNCQQCSSGSIRCAADKKCLPAYTRCNGVAECSDGSDEQKCSCEECLGAHSNTYMC NESNRCLKRDEVCSPYSMCPNATYTDKAYCAALVLKNSGRFPY" gene complement(<274693..>277855) /gene="Cre-wrm-1" /locus_tag="CRE_04725" /db_xref="WormBase:WBGene00055606" mRNA complement(join(<274693..274793,274840..275075, 275120..275283,275340..275558,275604..275731, 275786..276629,276697..277071,277125..277288, 277504..277617,277831..>277855)) /gene="Cre-wrm-1" /locus_tag="CRE_04725" /product="CRE-WRM-1 protein" /db_xref="WormBase:WBGene00055606" CDS complement(join(274693..274793,274840..275075, 275120..275283,275340..275558,275604..275731, 275786..276629,276697..277071,277125..277288, 277504..277617,277831..277855)) /gene="Cre-wrm-1" /locus_tag="CRE_04725" /note="contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR000225 (Armadillo); coded for by the following C. remanei cDNAs: DT936917" /codon_start=1 /product="CRE-WRM-1 protein" /protein_id="EFO86602.1" /db_xref="InterPro:IPR000225" /db_xref="InterPro:IPR011989" /db_xref="WormBase:CRE04725" /db_xref="WormBase:WBGene00055606" /translation="MDEECTDAETYGSQPCTPQSFNPMMPSTSRVATPVTPSRMSNRQ VPASPFRAQPQNMEPSISRVHELREGAAGKRSYTNEWMQNSYIPPTSQQQFSRAPSMI GSTISNMSNMSQLSQMTKFSALSVNTEYGQFNNWINESQPVLSKVSHSSMENQDPMQR RKRMSIPEIIQSLASTEVSVQASAIRELEPLAKKWLLEQTYGQADLKLIIRALFQVLY PREVENENVIRKTFEILHHSVMLTSRHARNTDKIFLSLNAELMNSKSSIYEIVIKRAE RLDTVYESSAMVLLTHLCCKPYLMRHVFSEKVESPAHQRLHQTVMEFAVKNLNNSESK PKNKGFSVSIIKNLSRTNARIRYMAKQMDVINIFLSIIRNEYSDEDLLWPTMQALTTF CSDSENGSRFVVLGGAQVLCGLLSHGSTRLLHELLGCMRKLADLPAIQNQDMEESIHS VIRLVGCDDVTIVERATGVLRNIGLHNKMNKAIMVQNGVTSHALAVLRTSDRFRYQQS ANVDFTRQQILSIYENCLSILNNVTLMSQNDIIESAVHACQMISENPDSAHVLLHYFN VGNRKCRKLAVTVMKRVIEAVPSFAEPFVDLLGTTNEPLAILLLQRAYESLQEWKQTI AELMRMDQDTPQRREVDEKRKDHEDIVKRSVGLLTNLCRHGNPRFFDSLRHVLANQRN TALNPFLWITKDMSDSILPEWLEFILSICCTEWSQQNCLLYWFLKQANITQDDLQTLR NTRGNERVNEKANEKIRTYIDRIIDLGCRQQQLQNQQQMLMAQQQQQQM" gene complement(<281851..>282656) /gene="Cre-arf-1.2" /locus_tag="CRE_04726" /db_xref="WormBase:WBGene00055607" mRNA complement(join(<281851..281928,282008..282216, 282321..282431,282509..>282656)) /gene="Cre-arf-1.2" /locus_tag="CRE_04726" /product="CRE-ARF-1.2 protein" /db_xref="WormBase:WBGene00055607" CDS complement(join(281851..281928,282008..282216, 282321..282431,282509..282656)) /gene="Cre-arf-1.2" /locus_tag="CRE_04726" /note="contains similarity to Pfam domain PF00025 ADP-ribosylation factor family; contains similarity to Interpro domains IPR006687 (GTP-binding protein SAR1), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR006688 (ADP-ribosylation factor), IPR006689 (ARF/SAR superfamily); coded for by the following C. remanei cDNAs: DR781703, DR777165, DR408887, DR781469, DR779921, DR408376" /codon_start=1 /product="CRE-ARF-1.2 protein" /protein_id="EFO86901.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006687" /db_xref="InterPro:IPR006688" /db_xref="InterPro:IPR006689" /db_xref="PFAM:PF00025" /db_xref="WormBase:CRE04726" /db_xref="WormBase:WBGene00055607" /translation="MGNVFGSLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGE AREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCA TSGDGLYEGLDWLSNQLKNRS" gene complement(<284569..>287780) /locus_tag="CRE_04727" /db_xref="WormBase:WBGene00055608" mRNA complement(join(<284569..284601,284647..284784, 284827..284958,285011..286121,286777..286965, 287056..287500,287551..287672,287722..>287780)) /locus_tag="CRE_04727" /product="hypothetical protein" /db_xref="WormBase:CRE04727" /db_xref="WormBase:WBGene00055608" CDS complement(join(284569..284601,284647..284784, 284827..284958,285011..286121,286777..286965, 287056..287500,287551..287672,287722..287780)) /locus_tag="CRE_04727" /note="contains similarity to Pfam domain PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar); contains similarity to Interpro domains IPR000571 (Zinc finger, CCCH-type), IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86743.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR000571" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00642" /db_xref="WormBase:CRE04727" /db_xref="WormBase:WBGene00055608" /translation="MNIDNEDAFFDWLSDELTPITDADPNALAKYVLALVKKPDKSQD ELKEFTKDQLNVFLGDHTAPFVEKVFVALISKSYLPSETVPSETAPTAASEEKSTRKD DVPVEKPSSKSVVTRLPSPSAPAGTQKPSGSTSSSKSDNKPIRKRISPPPSESSREKD KEKVSRDKDRRRSRSPRDRRGRTTTTRSGRASSSDRDRHTRRRSRSRTRSSSGSRTPP YKSRSSRRRCKDFEERGYCIRGDQCPYYHGRDPVVVDENALSAMVPLPAPPNFSFSLP PPGYSAINPPPPGVVVTSGEYNPETPALTNYSMPPPPIPGAIPGAWTQQPPSVPQYVP QPVSTFTQPPPTASSAIAAQQPGAFRGGIRGRGTIRGRGGFSRGGFTGVINRDNCTLQ VAKIPPEMNNIAKLNEHFASFGTVDNIQVRYNGEIDAALVTYSSKYDAIKAYKSPAPV LNNRFIKVFWHNPGNEGAEGSTDKTATPASPPKPAEKPKIATVQESKFVSVAAQNQRK QLQDAKERLTKEKSLLSTLVQAQNQHNIVLDKWLAKQKSLLVKARTSTDENERKNSTK LVKHLHKQIKACKEEIDGILLKISEKSMLVDEVVAQIEALKNPYKTEDGNRKRKAGSD GEDSRSKMSSIVVVKGVKEELVADLMAQMEMFGEVFDHSVKADEDGLMTAVFPFKRTS DALKAMSEGKLLNGQALDMELKTERIEEIPSTDTNMSADQLLAAIPSGLESDDEDDLL ND" gap 286293..286302 /estimated_length=10 gene <289557..>292113 /locus_tag="CRE_04530" /db_xref="WormBase:WBGene00055609" mRNA join(<289557..289664,289713..289875,289921..290004, 290048..290196,290241..290351,290481..290606, 290881..291039,291206..291381,291429..>292113) /locus_tag="CRE_04530" /product="hypothetical protein" /db_xref="WormBase:CRE04530" /db_xref="WormBase:WBGene00055609" CDS join(289557..289664,289713..289875,289921..290004, 290048..290196,290241..290351,290481..290606, 290881..291039,291206..291381,291429..292113) /locus_tag="CRE_04530" /note="contains similarity to Pfam domains PF00635 (MSP (Major sperm protein) domain), PF00650 (CRAL/TRIO domain); contains similarity to Interpro domains IPR008962 (PapD-like), IPR001251 (Cellular retinaldehyde-binding/triple function, C-terminal), IPR000535 (Major sperm protein), IPR000886 (Endoplasmic reticulum, targeting sequence); coded for by the following C. remanei cDNAs: DR781218" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86855.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR000886" /db_xref="InterPro:IPR001251" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="PFAM:PF00650" /db_xref="WormBase:CRE04530" /db_xref="WormBase:WBGene00055609" /translation="MVTDIANSKIFRRRSSTFTDPTNVLAVHELRSRILQDPAATVKH SADDIQRIRHEDWWLDRFLGSVNYDVDIAYAIILECLKWRRNFEVDRISLLSLKPLLD NQLMYLHENDLQNRHILWIMMNKYKNGEEGFEKLFTFWMERHYMEYKGCQPLTVFIDM SGTGLKNMSFDVMKFIIHSSKYYYPNAIESILIFDNPAILNASWKVIGSWLESSAANQ RQDLLTFVTKLSVTHYVPKSHLLEHQGGTDTFKFTMDELAKCLPPPPPPKPSPKLLQQ RMHSIDDTTNNNVTEFDFSSFQRRNVKFDEESVTKRAPSLSRRSSRGPKNRKSHIPPA LRPLIDNRVNAPSDDWSSNDFVSITPRDELRLEKLDGENDLLDVVLVKNQSSETPIMF KFKTTSPEKFRVRPSSGIVQPGTTEIIRVYLQYGELFRICFRDIINKRKLPEYRHSWN KEKFLLLTMESSSTDIDNFSEQFKNAINKAEFKFKCRLSENVKLDQPEERRSSFLLQQ QQLLNTKKDGFSLGGVNFNMPLIIFICFLFLMFQFIYILQMRSDNALLRETLVSLSGQ IKEANSLSSENIVETVKNEL" gene <292765..>293310 /gene="Cre-rpl-23" /locus_tag="CRE_04531" /db_xref="WormBase:WBGene00055611" mRNA join(<292765..292990,293114..>293310) /gene="Cre-rpl-23" /locus_tag="CRE_04531" /product="CRE-RPL-23 protein" /db_xref="WormBase:WBGene00055611" CDS join(292765..292990,293114..293310) /gene="Cre-rpl-23" /locus_tag="CRE_04531" /note="contains similarity to Pfam domain PF00238 Ribosomal protein L14p/L23e; contains similarity to Interpro domain IPR000218 (Ribosomal protein L14b/L23e); coded for by the following C. remanei cDNAs: DT936262, DY524825, DR406473, DR779529" /codon_start=1 /product="CRE-RPL-23 protein" /protein_id="EFO86783.1" /db_xref="InterPro:IPR000218" /db_xref="PFAM:PF00238" /db_xref="WormBase:CRE04531" /db_xref="WormBase:WBGene00055611" /translation="MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYG IRGRLNRLPSAGVGDMFVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNA GVIVNNKGEMKGSAITGPVAKECADLWPRIAANAGSIA" gene <293454..>296585 /gene="Cre-swp-1" /locus_tag="CRE_04532" /db_xref="WormBase:WBGene00055612" mRNA join(<293454..293680,294175..294317,294366..295128, 295182..295428,295474..295758,295808..296359, 296406..>296585) /gene="Cre-swp-1" /locus_tag="CRE_04532" /product="CRE-SWP-1 protein" /db_xref="WormBase:WBGene00055612" CDS join(293454..293680,294175..294317,294366..295128, 295182..295428,295474..295758,295808..296359, 296406..296585) /gene="Cre-swp-1" /locus_tag="CRE_04532" /note="contains similarity to Pfam domain PF01805 Surp module; contains similarity to Interpro domain IPR000061 (SWAP/Surp)" /codon_start=1 /product="CRE-SWP-1 protein" /protein_id="EFO86900.1" /db_xref="InterPro:IPR000061" /db_xref="PFAM:PF01805" /db_xref="WormBase:CRE04532" /db_xref="WormBase:WBGene00055612" /translation="MGSWNRRNQISSNDAQDVSESDFCVLKLRCGLQEFKDLLIFGYA SSIFPNDYQSENIAEERHMVPCLGDAENRVDRYDCRLLLPSISVATKRSGLPAEKCPT EEMEEEMCEEERYLDLHKDIQREQEEEEKRLKNQRNAIGFDYGTGTMREPESDSEDEP FEPPEGIKFPVGLELPPNMKLHHIIEKTASFIVANGTQMEIVIKAKQRNNAENFGFLE FDNRLNPFYKYLQKLIREKKYIPDISKRPKKLNKTAFSSSKPAISSSLAAIAAAHGSG SDSDASDSDCELHPSLLSEGAKKSVTPDKPGTIGPRKKPIEYDKPPVFDLKPARDITQ RNDVYAALFKNLAHVTRQAAGVEEIKHGTEKNEEIDPTPPEDDPNDRLEDPEYREWYE MFYGKPCPWVGPRPMIPPTPDLEPILNSYAETVALKGAEVEEALAARKDLQLNFMNPL SPYHSYYHHKIRLHQWRMFQTSQEGVSYPASIPLVAPIVPLVSSDLLPPPISTAGCSP GPSSLLNLSLTTPPEPPMNRRQRRRLLETSRIDESVLEPGVFDPITDIPKSASTPANL QSLGGLKPISFTLKTDGTNEDSSFRFDPDADEISFAGPSDSTADDSYSSGLFPPPPAP PAFQSSIQTQVDRKEKARIFMEKLLLEKKMKKQQEDEERQKLEEETRRKAEKISESLS ERRSERKNTEEAPKERIPKSLDDMISSKINSLLSESGFNPIEEKKPDIKDETEKKKQR RRSRSRRRSRSRSSRDRDRSRSDERKKSRKSDRHRSRSRSRDRYRRNRSRSRERSYRR " gene complement(<296836..>300615) /gene="Cre-rgs-5" /locus_tag="CRE_04728" /db_xref="WormBase:WBGene00055613" mRNA complement(join(<296836..296977,297038..297387, 298479..298951,298995..299093,299192..299398, 300361..300501,300567..>300615)) /gene="Cre-rgs-5" /locus_tag="CRE_04728" /product="CRE-RGS-5 protein" /db_xref="WormBase:WBGene00055613" CDS complement(join(296836..296977,297038..297387, 298479..298951,298995..299093,299192..299398, 300361..300501,300567..300615)) /gene="Cre-rgs-5" /locus_tag="CRE_04728" /note="contains similarity to Pfam domain PF00615 Regulator of G protein signaling domain; contains similarity to Interpro domain IPR000342 (Regulator of G protein signalling); coded for by the following C. remanei cDNAs: DR776657" /codon_start=1 /product="CRE-RGS-5 protein" /protein_id="EFO86640.1" /db_xref="InterPro:IPR000342" /db_xref="PFAM:PF00615" /db_xref="WormBase:CRE04728" /db_xref="WormBase:WBGene00055613" /translation="MSGFLGRLRRKKEKENGHPSTSSDCNYQNGDAHRDSLSNDHIYI PSQRRQSSSLSVPQPTADIGSGSDHEGIQVKQKPQLASSLDRLLIDSSALSYFIQYLD STDKLNLIKFWMHVEGFKSSFSEQIEAAQELSLRDAKSIYDKYVDDGSTSSLALPRKI KQIVEDNLAMNPLQKSCFDEAQSFVKSLFEYRYFDEFHNSVYYKKHELEVLSDGCSLG DILKVQPLLLSFLEFIKEKEDHDMVQFLLGCDSFEANLELMEDSEALGDAMALYEKYF SMQATNMIDLGGAIRAEIESLICEESGRPNRKAFRTARTACFFRLHDKYLSDFLKTSY YHSYLSELQSFIEFTVELPRKVRNRAASSSDVASSTDSLTHAFSRHLEVLEKKMSDKD EQRTPTCSPSPSKRSTPRSSRLAEIDEMGRYHALYDDSHSQTPQKPMRIRTTLRKYLD KNSLREEEIAEEVARTIIRDMQEMVASSDPPNSPTF" gene <301045..>301502 /gene="Cre-lgg-3" /locus_tag="CRE_04533" /db_xref="WormBase:WBGene00055614" mRNA join(<301045..301233,301278..301370,301419..>301502) /gene="Cre-lgg-3" /locus_tag="CRE_04533" /product="CRE-LGG-3 protein" /db_xref="WormBase:WBGene00055614" CDS join(301045..301233,301278..301370,301419..301502) /gene="Cre-lgg-3" /locus_tag="CRE_04533" /note="contains similarity to Pfam domain PF04110 Ubiquitin-like autophagy protein Apg12; contains similarity to Interpro domain IPR007242 (Autophagy protein 12)" /codon_start=1 /product="CRE-LGG-3 protein" /protein_id="EFO86589.1" /db_xref="InterPro:IPR007242" /db_xref="PFAM:PF04110" /db_xref="WormBase:CRE04533" /db_xref="WormBase:WBGene00055614" /translation="MDSLANEAAPESTTSPETIIAPTAVAPKLKKVTIKLKNIGDAPV LKNKKLIVKSTDTLASLSKVLRKLLNLPLNDSLFLYIDNAFAPSLDCTFESLSRCYSV RSTGDEVLEIQYSITPAYG" gene <301702..>303568 /locus_tag="CRE_04534" /db_xref="WormBase:WBGene00055615" mRNA join(<301702..301710,301759..301975,302022..302108, 302158..302217,302270..302475,302529..302980, 303027..303243,303290..>303568) /locus_tag="CRE_04534" /product="hypothetical protein" /db_xref="WormBase:CRE04534" /db_xref="WormBase:WBGene00055615" CDS join(301702..301710,301759..301975,302022..302108, 302158..302217,302270..302475,302529..302980, 303027..303243,303290..303568) /locus_tag="CRE_04534" /note="contains similarity to Pfam domain PF05485 THAP domain; contains similarity to Interpro domain IPR006612 (Zinc finger, C2CH-type); coded for by the following C. remanei cDNAs: DR779237" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86635.1" /db_xref="InterPro:IPR006612" /db_xref="PFAM:PF05485" /db_xref="WormBase:CRE04534" /db_xref="WormBase:WBGene00055615" /translation="MDKRIDHDEEDRDSSEYEPIDDEEDDNADSFQQRIVYSKDVDSD DFQNQYLNEQEPSTTNHDQMEIPVSMKIDYEEIYPHNTVPVETSHEIIEAEKVYYENE MEDLVYHEIYGEGNDQKIGIDKRIRNIVGSSASCIVCQRTESEKIRLFKWPKSGELRE QWLHFFRLPCSVLDATQEPYICCYHFSSDTFVMMEDRIFWKMTALPKYRQRRPGLSEP FPWEPAMKLKVEQEALNQPSTSTASLGYRIRYRLPYNKHKSRNVHQVAIMTPVAQPHL FYEFHFNRYGLHNTKFYACLNCRKAKTESGIRDVIRTIHLDGYKFLSNGDPFNGHHFA CRPHNIYENKSQWRPIASQNEENGIYQSVEYMDPTGESLEWHSVIRPEVETPDDDVSH SRDDPPVMLFDNFENPITEEVIETEYVTEEPAAADLQYSQLDESEVEMKPSQKASKKF RIKCHLCLKTNFPSTQIFVNHLQKHILDEKQCKKCAKRISCDSRAICTRRGICENCIS " gene complement(<303766..>304218) /locus_tag="CRE_04729" /db_xref="WormBase:WBGene00055616" mRNA complement(join(<303766..303886,303932..>304218)) /locus_tag="CRE_04729" /product="hypothetical protein" /db_xref="WormBase:CRE04729" /db_xref="WormBase:WBGene00055616" CDS complement(join(303766..303886,303932..304218)) /locus_tag="CRE_04729" /note="contains similarity to Pfam domains PF02751 (Transcription initiation factor IIA, gamma subunit, beta-barrel domain), PF02268 (Transcription initiation factor IIA, gamma subunit, helical domain); contains similarity to Interpro domains IPR003194 (Transcription initiation factor IIA, gamma subunit), IPR009088 (Transcription factor IIA, beta-barrel), IPR015871 (Transcription initiation factor IIA, gamma subunit, C-terminal), IPR015872 (Transcription initiation factor IIA, gamma subunit, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86749.1" /db_xref="InterPro:IPR003194" /db_xref="InterPro:IPR009088" /db_xref="InterPro:IPR015871" /db_xref="InterPro:IPR015872" /db_xref="PFAM:PF02268" /db_xref="PFAM:PF02751" /db_xref="WormBase:CRE04729" /db_xref="WormBase:WBGene00055616" /translation="MSSYALYRGTTLGQALEQTLNDMEEEGLLPKSLVSKVLNQFDKS MNKQISRLPKEKMNFCASQLLTYRYCDNVWTFILNNVTLKDPQRSFDDPIDKLKIVAC DGRQTNLLQNMSGQGSSKRVARAAGDDDDDDSD" gene complement(<304418..>305170) /locus_tag="CRE_04730" /db_xref="WormBase:WBGene00055617" mRNA complement(join(<304418..304554,304604..304919, 304966..305055,305117..>305170)) /locus_tag="CRE_04730" /product="hypothetical protein" /db_xref="WormBase:CRE04730" /db_xref="WormBase:WBGene00055617" CDS complement(join(304418..304554,304604..304919, 304966..305055,305117..305170)) /locus_tag="CRE_04730" /note="contains similarity to Rattus norvegicus Uncharacterized protein C11orf46 homolog.; SW:Q5FVK8; coded for by the following C. remanei cDNAs: DR781627" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86770.1" /db_xref="WormBase:CRE04730" /db_xref="WormBase:WBGene00055617" /translation="MNANDFLAQLAGINVAPEVVENEEEPGDYEEISYEEVDAEQFDT FEARASRPGNSKRRVSRGRVAQRELQSLQFDNPGGEMVRFLPDSADIVNANRSRRNYT EKQAEIREEAIHHDKTGKLSTTTKGQTEVIDLCDCLNPDCDGCHWPCATCKSRKCVFQ CRQGRRDMIARVEEMFTVEGTKEHASATNPYFPYVIKD" gene <305440..>307206 /gene="Cre-abi-1" /locus_tag="CRE_04535" /db_xref="WormBase:WBGene00055618" mRNA join(<305440..305592,305641..305726,305774..306218, 306279..306873,307046..>307206) /gene="Cre-abi-1" /locus_tag="CRE_04535" /product="CRE-ABI-1 protein" /db_xref="WormBase:WBGene00055618" CDS join(305440..305592,305641..305726,305774..306218, 306279..306873,307046..307206) /gene="Cre-abi-1" /locus_tag="CRE_04535" /note="contains similarity to Pfam domains PF00018 (SH3 domain), PF07815 (Abl-interactor HHR); contains similarity to Interpro domains IPR001452 (Src homology-3), IPR000727 (Target SNARE coiled-coil region), IPR012849 (Abl-interactor, homeo-domain homologous region); coded for by the following C. remanei cDNAs: DY529476, DR779683, DR778958, DT936250, DR407669, DT933904, DR776631" /codon_start=1 /product="CRE-ABI-1 protein" /protein_id="EFO86896.1" /db_xref="InterPro:IPR000727" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR012849" /db_xref="PFAM:PF00018" /db_xref="PFAM:PF07815" /db_xref="WormBase:CRE04535" /db_xref="WormBase:WBGene00055618" /translation="MLHHAEGGMSVNDLQELIDRRIPDNRNQLETSHENLAKVAEFCK KNYVTSRDQPLALEETKQYAIQSLASVAYQINKMAVDLHDMLAFQTEKVDSLVNQVQY VGQVVDVHKEKLARREIGALTTNKTLFKQPKIIAPAVQEPKLRYQRTPIDYSILDGIG HGVRSADQSRGGTLISRATSSVSGSSPSQYHNDSPAYGVFSGERTATLGRTMRPYAPS IAPSDYRLPQMSSQSESRMTRQISHGSEFGDHLSGGGGSGSQHGSSDYNSIYQQDRYG TIRAGGRTTIDGGSVAAPRLPSAQSSAGPESPTFPLPPPQISSMHYNGYVAPGSVVQQ QQQPYQPQNYGTIRKSTVSRSDLPPPPSSVLTGNRISIHDDMDDLPPPPESVGGSSAY GVFSGGRSDSYLSSQPASLFDTSAGWMPNEYLEKVRVLYDYDAQKEDELTLRENSIVY VLKKNDDDWYEGVLDGVTGLFPGNYVVPL" gene <312425..>313328 /gene="Cre-rcn-1" /locus_tag="CRE_04536" /db_xref="WormBase:WBGene00055619" mRNA join(<312425..312544,312592..312704,312787..313047, 313193..>313328) /gene="Cre-rcn-1" /locus_tag="CRE_04536" /product="CRE-RCN-1 protein" /db_xref="WormBase:WBGene00055619" CDS join(312425..312544,312592..312704,312787..313047, 313193..313328) /gene="Cre-rcn-1" /locus_tag="CRE_04536" /note="contains similarity to Pfam domain PF04847 Calcipressin; contains similarity to Interpro domain IPR006931 (Calcipressin)" /codon_start=1 /product="CRE-RCN-1 protein" /protein_id="EFO86834.1" /db_xref="InterPro:IPR006931" /db_xref="PFAM:PF04847" /db_xref="WormBase:CRE04536" /db_xref="WormBase:WBGene00055619" /translation="MVADNSEKSTKSVANGSLISTVSSKDDLPNAIIVTQVPEDVFDN KEDKANFSSLFTQIEKDIHFDFLRSFRRVRVIFSSPENATAAKLIVQGFSFKGHELKA FFAQRIYMSANSQMLQPPPLEKQFLISPPCSPPVGWEQTKDMPPVVCNFDLMARLASF AIDEKYEVHNGDDLTPTIVVHPCETPIDIPSALEMPRTPRPSSPAEDAE" gene complement(<313813..>315461) /gene="Cre-pst-2" /locus_tag="CRE_04731" /db_xref="WormBase:WBGene00055620" mRNA complement(join(<313813..314244,314289..314443, 314795..315000,315057..315178,315226..315298, 315355..>315461)) /gene="Cre-pst-2" /locus_tag="CRE_04731" /product="CRE-PST-2 protein" /db_xref="WormBase:WBGene00055620" CDS complement(join(313813..314244,314289..314443, 314795..315000,315057..315178,315226..315298, 315355..315461)) /gene="Cre-pst-2" /locus_tag="CRE_04731" /note="contains similarity to Pfam domain PF08449 UAA transporter family; contains similarity to Interpro domain IPR013657 (UAA transporter); coded for by the following C. remanei cDNAs: DR777512, DT936185" /codon_start=1 /product="CRE-PST-2 protein" /protein_id="EFO86864.1" /db_xref="InterPro:IPR013657" /db_xref="PFAM:PF08449" /db_xref="WormBase:CRE04731" /db_xref="WormBase:WBGene00055620" /translation="MTTAQIHSDCSSSMLPRHVKDDVEPIHLLGFNIARKPKWLQFVL LSGAIFVLYVGYGYMQELIFKLPGMKPFGWTLTLIQFLIYSSCGYAECLVWHNTRRMI PWRIYGVIAFFTVATMGLSNASVGYLNYPTQVIFKCCKLIPVLIGGILIQGKRYGWID ISAAILMSLGIIMFTLADNKVSPNFDSRGYIMISGALLADAVIGNIQEKNMKKYGGSS NEVVLYSYGIGSAFIFSYVILSGEIFTAIPFFFENAWKTFGYALIFSFLGYLGVNVVL THIKVFGALVAVTVTTLRKALTIILSFLLFSKPFTIEYVYAGSVVMLAIYLNLYSKNK TSWDNMIRRLVARAMGYHDVSVARKDPMLV" gene complement(<316006..>316828) /gene="Cre-rps-12" /locus_tag="CRE_04732" /db_xref="WormBase:WBGene00055621" mRNA complement(join(<316006..316273,316447..316584, 316812..>316828)) /gene="Cre-rps-12" /locus_tag="CRE_04732" /product="CRE-RPS-12 protein" /db_xref="WormBase:WBGene00055621" CDS complement(join(316006..316273,316447..316584, 316812..316828)) /gene="Cre-rps-12" /locus_tag="CRE_04732" /note="contains similarity to Pfam domain PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; contains similarity to Interpro domains IPR000530 (Ribosomal protein S12e), IPR004038 (Ribosomal protein L7Ae/L30e/S12e/Gadd45); coded for by the following C. remanei cDNAs: DT935842, DT933286, DY525527, DT936585, DY528061, DY526156, DY529040, DY526643, DT933843, DR780632, DY528206, DR780017, DY527858" /codon_start=1 /product="CRE-RPS-12 protein" /protein_id="EFO86757.1" /db_xref="InterPro:IPR000530" /db_xref="InterPro:IPR004038" /db_xref="PFAM:PF01248" /db_xref="WormBase:CRE04732" /db_xref="WormBase:WBGene00055621" /translation="MSDAGGDVQVAPAAIAQGPMDKEQALRAVLRAAHHADGLAKGLH ETCKALDKREAHFCVLAENCDEPQYVKLVETLCAEHQIPLIKVADKKIIGEYCGLCKY DKEGKARKVVGCSSAVVTNWGNEEQGRAILTDYFNSKN" gene <317170..>318156 /locus_tag="CRE_04537" /db_xref="WormBase:WBGene00055622" mRNA join(<317170..317283,317340..317520,317571..317867, 317915..>318156) /locus_tag="CRE_04537" /product="hypothetical protein" /db_xref="WormBase:CRE04537" /db_xref="WormBase:WBGene00055622" CDS join(317170..317283,317340..317520,317571..317867, 317915..318156) /locus_tag="CRE_04537" /note="coded for by the following C. remanei cDNAs: DT936458" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86675.1" /db_xref="WormBase:CRE04537" /db_xref="WormBase:WBGene00055622" /translation="MNDGELNQILNHFLSKFKEIQIDQSPALLQKLTLSQFKNFAQID VQTTTSLSEGLEDYLSDHLEILNLQVQLKRKKCELAQKLTKLNTQFNEAIEETNKRNT LLKTGNIDFLNPPRQTEKAVFAIPTESKKQLPLSESSCSTIAMKDHAAHRPTPAMDPV MKPPTYTSLAMSTRKEKKENVPKPESFCLDDSVLNGHEISMINISDERRRLQFDDLDD EDETGETPLKPKIVLPKTPARNPASVPAASERKTVDIYTMPPPPVFTSSSGRIFNQNR D" gene <318347..>318951 /locus_tag="CRE_04538" /db_xref="WormBase:WBGene00055623" mRNA join(<318347..318623,318669..318772,318826..>318951) /locus_tag="CRE_04538" /product="hypothetical protein" /db_xref="WormBase:CRE04538" /db_xref="WormBase:WBGene00055623" CDS join(318347..318623,318669..318772,318826..318951) /locus_tag="CRE_04538" /note="contains similarity to Pfam domain PF00583 Acetyltransferase (GNAT) family; contains similarity to Interpro domains IPR000182 (GCN5-related N-acetyltransferase), IPR016181 (Acyl-CoA N-acyltransferase); coded for by the following C. remanei cDNAs: DY529228" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86867.1" /db_xref="InterPro:IPR000182" /db_xref="InterPro:IPR016181" /db_xref="PFAM:PF00583" /db_xref="WormBase:CRE04538" /db_xref="WormBase:WBGene00055623" /translation="MEEEEDGATKSLSQQENKFSLKLQRVTPENLKTVRTLVTSIFPV SYSDKFYQECVDNELVGVIIHNGEAIAIVAVKPENFETGQVLYIRSFGVHPRHRESGI GSFLMDFVHDKCKSLNLQNAMLHVQISNKKAIGFYKKRGFNIESMVPKYYQRCDPPDA FIMRKSFL" gene complement(<319819..>325125) /gene="Cre-par-3" /locus_tag="CRE_04733" /db_xref="WormBase:WBGene00055624" mRNA complement(join(<319819..320446,320494..320654, 321234..321483,321536..321758,321889..322035, 322403..323548,323584..324510,324593..324737, 324812..324919,324955..>325125)) /gene="Cre-par-3" /locus_tag="CRE_04733" /product="CRE-PAR-3 protein" /db_xref="WormBase:WBGene00055624" CDS complement(join(319819..320446,320494..320654, 321234..321483,321536..321758,321889..322035, 322403..323548,323584..324510,324593..324737, 324812..324919,324955..325125)) /gene="Cre-par-3" /locus_tag="CRE_04733" /note="contains similarity to Pfam domain PF00595 PDZ domain (Also known as DHR or GLGF); contains similarity to Interpro domains IPR001478 (PDZ/DHR/GLGF), IPR000238 (Ribosome-binding factor A); coded for by the following C. remanei cDNAs: DY529679, DR778605, DY527916" /codon_start=1 /product="CRE-PAR-3 protein" /protein_id="EFO86857.1" /db_xref="InterPro:IPR000238" /db_xref="InterPro:IPR001478" /db_xref="PFAM:PF00595" /db_xref="WormBase:CRE04733" /db_xref="WormBase:WBGene00055624" /translation="MHTGGRSRYDSSVIPPPPPYHFNHVHTPPQRVIQQTHRSRDPPV YSPNMTTTNDNVTGSNDRIRVHRLECASDGGILDMDDVLEEVFDLNYDQILAITDEAN GGTTTPTYSKIQKQQHHYAQPLPYSRKFEGPSTPIASAFGSVTVNHQAHRSSSPYNVG FARATTRDLPIPPSSKDRRDSVVEVSSFENIPQSGLRVSVTTPKSDARLLNEPILRSS LRTEPSGSRADDSTPTKHSRVTLSPEVEKRLAEQEGEERRSERRKYEKNGGRFNRGSD RKSRITDALLDARDRIADQLENEVEEKKVHSVRGRIEQGPLPGTTLITFLPVGDKEND LSKQMGIEVNAVFDESSEIPSTSEPSKLNSIQVMKIEEGGRVGKDGRIRVGDCILAID GKFVDQMSIIRARASISELASINRPITLVINRTLDSFLEQESAKPIQSALQQANTQYI VYFTETLSQHSFSGAKGFGFTVTGRETSKGERLFYIGTVKPYGVALGHLKSGDRLLEI NGTPTGQFTQLEIVEKLKETMVGAKIKFLVARVSQTNSVMNSSSSSENKENEETPKNE EEKSAPQKLPLPALMTPPVPKESPPPSSNPRFDIVIPFINGSSSAGLGVSLKARVSKK SNGTKVDCGIFIKNVMHGGAAFKEGGLRVNDRIIGVEDLHLESFNNMEAQAALSKKLK EVGMVRSSVRLTILRDNDYHPGHISRDLSRITVDASSPSPSSRMSSHTAPDSLLQSPH TRATSSSGPDSSHSRQSSSSSAVPALIRPNERDSIISDSTNRHDESELPDTDPFNREG PGRKSLSEKRGMGAAADPQHIKLFQEIKHQRQNSAPTSSTQKRSKSQPRSLSQRNYRS PMKLVDLPQPSVTSTVAQHVPLDDSDMLNRRSQSMESINRPVESILRGTGQINPSTSS KVQFMQNASPDQHPFPPGSALLRLKNEESRSRDKSRRKSMGNAMRNFFGFGSKSRDAS PEKAVELRSVERPKSIIDERGGKEQLKTTTAPPPPPPHQGPRRGSGGNVFVDYGEPYG LIPQYPHNTTSGYESYADSELYDRYAAHRYYPRRGIDEDEYIYRQQSSSSLNPSSYVN YGLPASNAYHVDARVPSKASGSVSKTTMRRVFPTEYEDDSYQHIPQSSRYQQDGSGRG SDYHHMFNSWFAYTGGGAVGAAPVIKSSYGPSPVRIAAASAIERGESFAVESGGGPPP PPIDRRGRTTSGGAIPTSTSGPSGFHSSKEKYADARSGKFNGGSTRLFIPRHGGGLSA AAFATNFGSTEGYETRGGSGSPSQYRRRDQGPPHRFPQY" gene complement(<328167..>328829) /locus_tag="CRE_04734" /db_xref="WormBase:WBGene00078756" mRNA complement(join(<328167..328250,328305..328394, 328659..>328829)) /locus_tag="CRE_04734" /product="hypothetical protein" /db_xref="WormBase:CRE04734" /db_xref="WormBase:WBGene00078756" CDS complement(join(328167..328250,328305..328394, 328659..328829)) /locus_tag="CRE_04734" /note="contains similarity to Homo sapiens Isoform 4 of Partitioning-defective 3 homolog B; HI:HIT000059691" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86871.1" /db_xref="WormBase:CRE04734" /db_xref="WormBase:WBGene00078756" /translation="MSASSTSSSTSCSQEDGGVPSGCCKDGDEGDSTLKKRMQQYGSV GAYANSTISTLDRSQYQSLPLNGTRRVTVQFGHMKIVVPWKESDLTVGQLAEAALTRY KKAKGLVSFHFN" gene <331065..>332376 /locus_tag="CRE_04539" /db_xref="WormBase:WBGene00055626" mRNA join(<331065..331204,331246..331533,331581..331668, 331713..331797,332138..332230,332276..>332376) /locus_tag="CRE_04539" /product="hypothetical protein" /db_xref="WormBase:CRE04539" /db_xref="WormBase:WBGene00055626" CDS join(331065..331204,331246..331533,331581..331668, 331713..331797,332138..332230,332276..332376) /locus_tag="CRE_04539" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86585.1" /db_xref="WormBase:CRE04539" /db_xref="WormBase:WBGene00055626" /translation="MTAVLVAYFYSFLILLLISSANSEFIRLKRQASLATKDGIDIPF TLRSAITCLTPGIRENLCLGPRVQVLKEERIGLNNRKGATYGYHNGVDIRLLRKHKVP LINDDTEIGHSIGATVDVTRDDGVLEVGTRDKIFQAWKHNRGGLVEWDSQGAGVDIGS RASVADDLIKLRHTLFGVNVGPTSRRSIVGPYQVGETNGQYLKPANNPVPSLYHNYYA GRGDWYKNQFRRPGDEYRTREQRACPWCFAVDSSYPTQTMFNPFFG" gene <334172..>335221 /gene="Cre-sdz-21" /locus_tag="CRE_04540" /db_xref="WormBase:WBGene00055627" mRNA join(<334172..334402,334459..334743,334823..>335221) /gene="Cre-sdz-21" /locus_tag="CRE_04540" /product="CRE-SDZ-21 protein" /db_xref="WormBase:WBGene00055627" CDS join(334172..334402,334459..334743,334823..335221) /gene="Cre-sdz-21" /locus_tag="CRE_04540" /codon_start=1 /product="CRE-SDZ-21 protein" /protein_id="EFO86809.1" /db_xref="WormBase:CRE04540" /db_xref="WormBase:WBGene00055627" /translation="MSTRLFFLLASIFTIVSGNDQFWVTSVLTEFKVRDQCAAFWNQS QACSNPSLRISTNINQPTQFASRAWQIQEILNSTGNPTFISQWHGSIDSIRVSVQVEG SNPLNPFGLVAKCDEGFHPKVVFNQSSFDVMERLSTRVVVINSQCFTAKVLLKVDTEC PYCPPPTTTPQPTTLAPESFIYTHRLPLIAIILLIIFTILSFCLFYFVLRRFMTLRRG FKTCPSLESGISTITPLSYSTVISPEKKQKEFVDFFALMPPVIEYEELDLDASIDIES MPRLGSLVYDYFCYENQVDVSVSDAVYV" gene complement(<335677..>342751) /gene="Cre-ckk-1" /locus_tag="CRE_04735" /db_xref="WormBase:WBGene00055628" mRNA complement(join(<335677..335779,336109..336231, 336281..336621,336672..336973,337020..337167, 337214..337450,337548..337619,339261..339311, 342542..>342751)) /gene="Cre-ckk-1" /locus_tag="CRE_04735" /product="CRE-CKK-1 protein" /db_xref="WormBase:WBGene00055628" CDS complement(join(335677..335779,336109..336231, 336281..336621,336672..336973,337020..337167, 337214..337450,337548..337619,339261..339311, 342542..342751)) /gene="Cre-ckk-1" /locus_tag="CRE_04735" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="CRE-CKK-1 protein" /protein_id="EFO86619.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04735" /db_xref="WormBase:WBGene00055628" /translation="MVGDTSDDSPGPSSSSQTNVMTTTGNVDRRSLLSAASMVRQQSD TTGVRRLVRARAVQEDDEAGPHSSNNLAATMSPNLSRPTRYVKSVSQQRSESYIQLNQ YRLMEEIGQGSYGIVKLAYNEEDKNLYALKVLDKMKLLKNFACFRQPPPRRNKENAAP SVLKNPLQLVQKEIAILKKLSHPNVVKLVEVLDDPNDNYLYMVFEFVEKGSILEIPTD KPLDEDTAWSYFRDTLCGLEYLHYQKIVHRDIKPSNLLLSDIGQVKVSHPKPTINHLP SLQIADFGVSCEFEGIDAFLSGTAGTPAFMAPEALTEGANHFYSGRAQDIWSLGITLY AFVIGTVPFVDNYIIALHKKIKNDPIIFPEAPVLSEALQDLILGMLKKDPGHRLMLHE VKVHTWVTRGGTVPMSSEQENCHLVTVTEEEIENCVRVIPRLDTLILVKAMGHRKRFG NPFRNKLSAQSSIRDRRKSSSVKDPTYVPPPNSPPATSNNNSSNKVDRPEIKCIEMNL SGLTLKVDEAMQPKVESARQ" gene complement(<351326..>352563) /locus_tag="CRE_04736" /db_xref="WormBase:WBGene00055631" mRNA complement(join(<351326..351740,351793..352240, 352287..>352563)) /locus_tag="CRE_04736" /product="hypothetical protein" /db_xref="WormBase:CRE04736" /db_xref="WormBase:WBGene00055631" CDS complement(join(351326..351740,351793..352240, 352287..352563)) /locus_tag="CRE_04736" /note="contains similarity to Brugia malayi P40, putative.; TR:A8NU76; coded for by the following C. remanei cDNAs: DR779899, DY527369, DY527717, DY529609, DT936436, DT934211, DY529220" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86634.1" /db_xref="WormBase:CRE04736" /db_xref="WormBase:WBGene00055631" /translation="MAPKPNPPPKEDTWAFQPIGSPFPPSPVKCMGEQNMYVALWYKH GKPIHGRSWNNGGVVECSFPYKEAELTTKAQLEGQIQVLQYVGDHNNQGFWYEWIKYK DRIEKLDDKHQLVRCGDSFPIFWKRKEGNLLGYVDNKTEEAWFSFNGKVIKQLGPQLN EMYIITRNCIGGPPHCECDNCPKPPPPPPIPPPGPPPPRVMHDEWIDIREGDPFPTRK LVQALDKTLDTLPGVNPDQYVALWFVYSGINQKLKIYLQVAANFSWFNNEYCKNVGSI QLLVRLGPHVVGYEYGWIPFPEAATFEEGKTWKPVHVNNHKGDISVGVVNLPGGKQIL AKVDVRNESYGYGYQGKEHSARGPACASSVTVLCRKALPGYKLDG" gene <352833..>353938 /locus_tag="CRE_04541" /db_xref="WormBase:WBGene00055632" mRNA join(<352833..352875,352940..353051,353102..353444, 353492..>353938) /locus_tag="CRE_04541" /product="hypothetical protein" /db_xref="WormBase:CRE04541" /db_xref="WormBase:WBGene00055632" CDS join(352833..352875,352940..353051,353102..353444, 353492..353938) /locus_tag="CRE_04541" /note="contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase; contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase); coded for by the following C. remanei cDNAs: DY525769" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86727.1" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006186" /db_xref="PFAM:PF00149" /db_xref="WormBase:CRE04541" /db_xref="WormBase:WBGene00055632" /translation="MANNRSTYGTCNNKNDFADEIIVKILNMGAVGNKFEAIMSSKQI FGLLDVVRDVFWKQGAMVELETPVKVCGDVHGQYSDVLRLLEKGGFPPTVNYLFLGDY VDRGPQSLEVVSLFLAYKVRFPGNFFMLRGNHETGAINRVYGFLDEIQRKYGSKIGAN LWNTFQTCFAYMPYTGLIAGRILCMHGGISKRMQSLNQLRKLPRPVLDIPNPSLEIDI LWSDPDQTIHGFDDSTRGVGQVFGDEALQEVMDRLGVDLIARAHQVVQDGYEFFYKKK LVTIFSAPHYCGEFDNAAAIMSVDVNLLCSFQVSSILR" gene complement(<354987..>360248) /gene="Cre-daf-4" /locus_tag="CRE_04737" /db_xref="WormBase:WBGene00055633" mRNA complement(join(<354987..355695,356194..356579, 356749..356853,356904..357046,357399..357458, 357906..358014,358067..358174,359076..359201, 359890..360027,360078..>360248)) /gene="Cre-daf-4" /locus_tag="CRE_04737" /product="CRE-DAF-4 protein" /db_xref="WormBase:WBGene00055633" CDS complement(join(354987..355695,356194..356579, 356749..356853,356904..357046,357399..357458, 357906..358014,358067..358174,359076..359201, 359890..360027,360078..360248)) /gene="Cre-daf-4" /locus_tag="CRE_04737" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000333 (Activin type II receptor)" /codon_start=1 /product="CRE-DAF-4 protein" /protein_id="EFO86570.1" /db_xref="InterPro:IPR000333" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04737" /db_xref="WormBase:WBGene00055633" /translation="MIDKGTVKLKLILLVLIFSTCLLNALPTPNLTSETNSDDVPEDV RRAQMDDEIVERDFDDSLVTRAFVNETNGTIYIQPVSEQKEEEDEEPELERRDDSIEC DHYDESKCEKLGECSITKEVCHPEKHLKMVGCLAVFAYPDNLTTNSTDEYFPVNRSLI KTMGCMQYQHDTMMDCVDKKKCLQTKLTHAQIGMCCCKTPNCNVLANVMLINPDVHKE SDASKGFWQSTPPSGMDGLGGLPIYWVLTTVLGGIFFFAILIALYVLWRCRQRQREED EKKRRNCESEKTNVMEAGNLPLVDHEVMIEMVETPKELPITDFQLICKGRFGRVFKAK WKSQNGEEKMVAVKKLVDTQKSSFEAEKKIFEGLVSLPRWYANVVQFICAEKMGEEYW IVTEFHERLSLYELLKHNEISVTSCNRIIMSMVDGLQFLHDDRPFFFGHVKRPIIHRD IKSKNILIKTDMTACIADFGLAREYNSNIEKSDLLGQVGTKRYMSPEMLEGATEFTAT AFKSMDVYSMGLVMWETINRTKLKSSDVVPEYQMPFQTIGFDPSIGIMRNHVVSKKER PQWRPEVFGQISMSFMAGVAEEMWDPEASARITAGCAFERVWTHVFSLQDCSEGYHSG NSLKDGKGGEDREEERRKNRRNDEMFKYHSKPNKPHPSPDPSLDDCPQLPPIPIITER GT" gene <370393..>370859 /locus_tag="CRE_04542" /db_xref="WormBase:WBGene00055634" mRNA join(<370393..370453,370504..370674,370726..>370859) /locus_tag="CRE_04542" /product="hypothetical protein" /db_xref="WormBase:CRE04542" /db_xref="WormBase:WBGene00055634" CDS join(370393..370453,370504..370674,370726..370859) /locus_tag="CRE_04542" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86596.1" /db_xref="WormBase:CRE04542" /db_xref="WormBase:WBGene00055634" /translation="MPTVTTPLPTTKRDPHFQDRFKITVHVELSIYLFMGLTLAFILI MIGVMMVFRWYYRQQLEIRLKELQQTYEPGRIFLMENANGNEVVQVRPGPLSPPITDQ TEYNVVAGYLRDDKRGQLF" gene complement(<371360..>373198) /locus_tag="CRE_04738" /db_xref="WormBase:WBGene00055635" mRNA complement(join(<371360..371551,371609..371713, 371757..371855,371899..372107,372118..372295, 372362..373033,373076..>373198)) /locus_tag="CRE_04738" /product="hypothetical protein" /db_xref="WormBase:CRE04738" /db_xref="WormBase:WBGene00055635" CDS complement(join(371360..371551,371609..371713, 371757..371855,371899..372107,372118..372295, 372362..373033,373076..373198)) /locus_tag="CRE_04738" /note="contains similarity to Pfam domain PF00282 Pyridoxal-dependent decarboxylase conserved domain; contains similarity to Interpro domains IPR002129 (Pyridoxal phosphate-dependent decarboxylase), IPR010977 (Aromatic-L-amino-acid decarboxylase), IPR015422 (Pyridoxal phosphate-dependent transferase, major region, subdomain 2), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86837.1" /db_xref="InterPro:IPR002129" /db_xref="InterPro:IPR010977" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="PFAM:PF00282" /db_xref="WormBase:CRE04738" /db_xref="WormBase:WBGene00055635" /translation="MDPVKLRLEGKKMIEIVANYWEEIRHRKPIPDVKPGYLNKLVPE HPPKTTETWETILGDLEEVVFNGSSHWNHPHFFAYFPAGIGYHSILADIISSGLSSVG FTWIACPPITELEKVTLDWLVTLMNLPEYFKNSHPGPGCGIIQSSASDSTLIAIMTAR AAKVEQVKNNPSSYKWVKDETLSIFYKIFYWQSNRSIHDSTDIITPYYHDPRVFKDFV MYFCDQGHSSIEKGAMLAGVRFRKLKGTRKYLDNYGLDPDVLQKAIEEDRARGFIPFM LVATVGTTATCGVDEIEKLGPICQKEGLFLHVDSAYAGEKSVFFVILIRSFAFCEEFK YLVKGIEYADSYNTNLHKAGMINFDCSPLWFKNGTYASRYYNVDPVYLAHEYQSTSAD YRHLEIPLGRRFRSLKIWFTLRNMGVDKIKEYQRKTVALALQFSKIILENEKFELFTP PHLGLATFRLKNHSNSDNKRFLDAINRDRRIHLVPSMVHGTFLLRFCVGSPLTDEDDI YHARRVMIEVYFKLFQK" gene complement(<373585..>375644) /gene="Cre-bas-1" /locus_tag="CRE_04739" /db_xref="WormBase:WBGene00055636" mRNA complement(join(<373585..373770,373822..374070, 374118..374471,374519..374728,374910..375377, 375522..>375644)) /gene="Cre-bas-1" /locus_tag="CRE_04739" /product="CRE-BAS-1 protein" /db_xref="WormBase:WBGene00055636" CDS complement(join(373585..373770,373822..374070, 374118..374471,374519..374728,374910..375377, 375522..375644)) /gene="Cre-bas-1" /locus_tag="CRE_04739" /note="contains similarity to Pfam domain PF00282 Pyridoxal-dependent decarboxylase conserved domain; contains similarity to Interpro domains IPR002129 (Pyridoxal phosphate-dependent decarboxylase), IPR010977 (Aromatic-L-amino-acid decarboxylase), IPR015422 (Pyridoxal phosphate-dependent transferase, major region, subdomain 2), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1)" /codon_start=1 /product="CRE-BAS-1 protein" /protein_id="EFO86753.1" /db_xref="InterPro:IPR002129" /db_xref="InterPro:IPR010977" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="PFAM:PF00282" /db_xref="WormBase:CRE04739" /db_xref="WormBase:WBGene00055636" /translation="MDSDKLREEGKKMIDFVADYWDGIRERKPLPAIKPGYINELVPA QAPSSPEDWSKIFDDLENVVVNGATHWHHPHFFAYFPTALSYQSIMADILSGGIAGIG FTWKSCPSMTELEMSSLDWVVDLMGLPEHFKNSHDGPGCGIIQSTASDSTMIAIMAAR ASHVERIKAEPTFMKWVSETGVGKTLKGIFDRVKTNKIDDEASGIITPYFHDPTVFEK FVMYCSDQAHSSVEKGAMLSAVRLRKLKATRGFLGNYSVSKETLQNAIKEDRARGYIP FMFLATVGTTCSCGVDQVDELGPICVEEGLYLHVDAAYAGTFALCDEFKYLIRGMEHV DSYNFNLHKAGMVNFDCSPMWFKNGTHISRYFNVDALYLAHEYQSTASDYRHLQVALG RRFRSLKIWFVLRNMGADKIREYLRRVGYNIAFYSFNFNFQTEVLAAEFSKLILENGK FEHFVPQHLGLTCFRLKNSTNADNEKLCNTINDDRRIHLVPSTVQGTYFLRMVVCSQL TTLDDVIYARDVIYEIADRLF" gene <377371..>379191 /locus_tag="CRE_04543" /db_xref="WormBase:WBGene00055637" mRNA join(<377371..377477,377525..377699,377965..378135, 378183..378314,378358..378433,378484..378724, 378774..378884,378927..>379191) /locus_tag="CRE_04543" /product="hypothetical protein" /db_xref="WormBase:CRE04543" /db_xref="WormBase:WBGene00055637" CDS join(377371..377477,377525..377699,377965..378135, 378183..378314,378358..378433,378484..378724, 378774..378884,378927..379191) /locus_tag="CRE_04543" /note="contains similarity to Aedes aegypti Putative uncharacterized protein (Fragment).; TR:Q172J6" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86529.1" /db_xref="WormBase:CRE04543" /db_xref="WormBase:WBGene00055637" /translation="MFWLFFAGGAAYFILQFLLRPDPIKLLNIYGQPGKWYFLKFNLM KFIIDRRQKKKNAKPESSESNKENLMNSQWGGDGGERDIQEMEKKHDLKEEWSADAVF FDASNQDGWYFTLGTAQRPNDIINLFFILRIPEVGTFVNEEIHTETNVKSIRCSEKEW KTESGFVVSCIEPMKKWRLRFNGKLATSPGKINFVKNGAEKMKDDVEVIDANFDLTWT NFGGQFDFDKMCSPTAIAHSLAIEPWSRGLFDKMRASHQTHYEQFGKLVGDIKIGNNE KKGIRMTSMRDHTIAGYRRWSDIRRYIMMIYHLEDGTCIHTSVISMPETVFSHLEFGY IVTPSGETKPVDRVHFSLPNHGEDRDFPDDFHYSFEVEGKTYHADVHIKEVVSFKMGL DQACQVNEGMCEYLVDGKRGWGFAEVEYRIHPY" gene complement(<379444..>384000) /gene="Cre-gak-1" /locus_tag="CRE_04740" /db_xref="WormBase:WBGene00055638" mRNA complement(join(<379444..379521,381501..382133, 382175..382516,382560..382800,382853..383033, 383082..383170,383215..383392,383441..383692, 383772..>384000)) /gene="Cre-gak-1" /locus_tag="CRE_04740" /product="CRE-GAK-1 protein" /db_xref="WormBase:WBGene00055638" CDS complement(join(379444..379521,381501..382133, 382175..382516,382560..382800,382853..383033, 383082..383170,383215..383392,383441..383692, 383772..384000)) /gene="Cre-gak-1" /locus_tag="CRE_04740" /codon_start=1 /product="CRE-GAK-1 protein" /protein_id="EFO86656.1" /db_xref="WormBase:CRE04740" /db_xref="WormBase:WBGene00055638" /translation="MNDIMNNCNPNFRSEEPRRQLTLNGVSWPVRTTEETISAPPISP LSFAFMSEEERTALNFPGRHFQPEINRPRNISKSASFTPEPSLDSTPPYNRKTFKIDD LLVVDDDEDDDDSPPSANSFEPKAHLGWASFGESILPSQPPSPPEPAKHTSAPVPLKR KVYVVRQQNREKDTSDHVVTHNDNMPGPPKEDSPPITTINDISDSDADVDVVGIDEDN SISIEANEDGNPPDLPPQSSIGSRFSYKSKKARYRYDSEEEEMINARFLSNISPPPLL EAQATSGSISSAKDNAGADEEKKCEDGQIEQRLGLEELNSAQILKTKVSSSTIPVLPL SKSIMERKKVALEMTRHAVIKKYNSPSFKNFTVAPKSVQIPAYNDNTPMTLYSNINKP LNSISKDVRGRCVRCRDRSPVDMSTFKFIDDTTVVSVRAHLCDQTRVMIARTAMWNRE YSKRLGDRAAGTVWQRPDEVTAQMTGFCSATVRRCIEIANLSIIPRCADRIGVSKNEL VSLKSTFGTEKFLGQTMRTPHVLTHYYAQKSQSIAGSRRPSSSNVTPPIPRMGNPPVE TEKNEDEDRRYLPFSLEHPFAIFFLRHHPLTYYQPSSSFPSSTSFQSSSPSVSPPESL VPPLKKTVLRWTSIQTPRILRPPNPSYVVPKMAVIPVMKKVDSTPPKKEEIVMTGPRK RGRPRKIRPSELTVRPIQPSTRRLRSYKKELCEIDEDVVDVVEGLVSKVSGTFSINTS " gap 380703..380712 /estimated_length=10 gene <385837..>388370 /locus_tag="CRE_04544" /db_xref="WormBase:WBGene00055639" mRNA join(<385837..385903,386075..386488,386610..386914, 387249..387479,387527..387582,387627..387979, 388033..>388370) /locus_tag="CRE_04544" /product="hypothetical protein" /db_xref="WormBase:CRE04544" /db_xref="WormBase:WBGene00055639" CDS join(385837..385903,386075..386488,386610..386914, 387249..387479,387527..387582,387627..387979, 388033..388370) /locus_tag="CRE_04544" /note="contains similarity to Interpro domain IPR006578 (MADF)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86851.1" /db_xref="InterPro:IPR006578" /db_xref="WormBase:CRE04544" /db_xref="WormBase:WBGene00055639" /translation="MTDRRRHGADGFHIAGMKNTMTSVVTSSHNTPRDTTDLQQQFTR EDAPTKATQYTLVRFINKIKLWLKFYNLQLQLITMVRDNPILYDDELQAQIPDNLLKA QKRETWDRIRNDIVWQDVSLVQEVWSDLLDQYARKSMDMSDNLIEAMRWTDSILNKKK SDSRPSSQLNSMSSTLDKNFYADVPLAEDVLEPEQPIGNTSPSLKYDYVVIQPQVNHG RTSSHQTHQPIQNSASQYSRRKSPSPRETEAIVRTYPLSPKRTNHRMGSSQEPKIPPI HADIKKDIPSMNFGRQSVLVEVEPSLSSYSTPNSKMYKMVNTQRGSTPQATVTVTSTR RLVQLPHRTSNLGFESMPDQLIEPPNMHAEPPKKKMMMDVGNHHQHHHHIHHRNNTMV EPSSSTMPTTRSDDALRNTKVMSDVVPIADDEIILDASGECKIGPSGMLLASQPPSSS RNLELNSNMPSTSEDGMQHYHQHEIEDGGVVEDMDQQIVGGAQSEEMAIQYDEDLSFQ QHINTVLNRLNDEDVRYIHSLLYMYLFFQKALMKFQMQKIILDARFGVGTARNLLKDE ICEVEPHDEIDPTQMPNEEPI" gene <388636..>390244 /locus_tag="CRE_04545" /db_xref="WormBase:WBGene00055640" mRNA join(<388636..388837,388887..389357,389408..389692, 389742..>390244) /locus_tag="CRE_04545" /product="hypothetical protein" /db_xref="WormBase:CRE04545" /db_xref="WormBase:WBGene00055640" CDS join(388636..388837,388887..389357,389408..389692, 389742..390244) /locus_tag="CRE_04545" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86644.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE04545" /db_xref="WormBase:WBGene00055640" /translation="MPQESSRDAEKEKVMRSRRGTVDTEISALTAFQTSLDVDDAPYR ARLYQLFGHIEKEFDTLYAENCALRARIVQLTQTEGEAGNVVAQEVFGVQEPGKSSRK AIQMGQKLRTALRGPPVFRDGSKFRLSRLLEGHKDGVWHVAADSTRNVCASASADQTA RVWSLESGTCLATYLGHTGSVNCVAISTNCAVDTTEGSGTAAGLLLATASGDESAHVW RVPSNNAPLEHSSEEEEENHGGGGNRDPNNILGLEHNRFTSSNEKSDGHRIRVPVMRL TGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILSGHESELNHCSTHSTH KLVLTSSKDSTFRLWDFRESIQSVAVFQGHQDSVTSVSFNTDYRLVSSSDDATVKIWD LRNMRTPLATIRLSSPANRVAVSKTHAVIAVPMDNRHVRIYDLNGNRLPRMPNRRCHE RMVTCCAWLDEHPTNNLLTSGFDRLVAAWKVNTTTS" gene complement(<390448..>392128) /gene="Cre-ced-6" /locus_tag="CRE_04741" /db_xref="WormBase:WBGene00055641" mRNA complement(join(<390448..390761,390808..391240, 391287..391571,391621..391898,391975..>392128)) /gene="Cre-ced-6" /locus_tag="CRE_04741" /product="CRE-CED-6 protein" /db_xref="WormBase:WBGene00055641" CDS complement(join(390448..390761,390808..391240, 391287..391571,391621..391898,391975..392128)) /gene="Cre-ced-6" /locus_tag="CRE_04741" /note="contains similarity to Pfam domain PF00640 Phosphotyrosine interaction domain (PTB/PID); contains similarity to Interpro domains IPR011993 (Pleckstrin homology-type), IPR006020 (Phosphotyrosine interaction region); coded for by the following C. remanei cDNAs: DR781821, DR408772, DR776476, DR776880, DR779854" /codon_start=1 /product="CRE-CED-6 protein" /protein_id="EFO86879.1" /db_xref="InterPro:IPR006020" /db_xref="InterPro:IPR011993" /db_xref="PFAM:PF00640" /db_xref="WormBase:CRE04741" /db_xref="WormBase:WBGene00055641" /translation="MAKDIYKTFKRSVSGIVGGSGNNGESSSSPSTSTGQVKYRGGTG RTWIHPPDFLINGHVEYVARFLGCVETSNENGTAAAREAIHAIRFQRDLKRSEQSRET AKLQKVEIQISIDNVIIADSKTKAVMHQFPLPRISFCADDKDDKRMFSFIARNDDGKP SCYAFTSEKLAEDITCTIGEAFDLAYKRFLDKNRASLENERNTYLLQRRIVELENENQ KLATLLQEVTNGGRRAEPNDYGIPPHPAFAPPSLPLSPMPQGPPPSLQPSSIYSMPKT NDNAPTEMAPMPPIATSPNGTSPSSPSSNSPSGPAPSMPPPRPPAVLAPPPPVAPRRV PVVSPKNSTAGQLDGLNFGEVKKPHSNVFDDSFDPRAGEKKSVSEAADYNPFGADFLP ALQNTNSAPPSASALALASEAIARLPSSDSSGPPKKTAADYDAMISEVEKKLAAMNNG TLVFGQLQTGDLGGIEGESEYGTPSDRLNPKVMNLKE" gene complement(<395052..>396982) /gene="Cre-ucr-1" /locus_tag="CRE_04742" /db_xref="WormBase:WBGene00055642" mRNA complement(join(<395052..395116,395171..395300, 395344..395554,395598..395709,395789..395846, 395893..396135,396182..396381,396426..396642, 396688..396813,396929..>396982)) /gene="Cre-ucr-1" /locus_tag="CRE_04742" /product="CRE-UCR-1 protein" /db_xref="WormBase:WBGene00055642" CDS complement(join(395052..395116,395171..395300, 395344..395554,395598..395709,395789..395846, 395893..396135,396182..396381,396426..396642, 396688..396813,396929..396982)) /gene="Cre-ucr-1" /locus_tag="CRE_04742" /note="contains similarity to Pfam domains PF00675 (Insulinase (Peptidase family M16)), PF05193 (Peptidase M16 inactive domain); contains similarity to Interpro domains IPR001431 (Peptidase M16, zinc-binding site), IPR011765 (Peptidase M16, N-terminal), IPR000209 (Peptidase S8 and S53, subtilisin, kexin, sedolisin), IPR011237 (Peptidase M16, core), IPR007863 (Peptidase M16, C-terminal); coded for by the following C. remanei cDNAs: DT936818, DR777748, DR781773, DR409034, DT933393, DT936450" /codon_start=1 /product="CRE-UCR-1 protein" /protein_id="EFO86818.1" /db_xref="InterPro:IPR000209" /db_xref="InterPro:IPR001431" /db_xref="InterPro:IPR007863" /db_xref="InterPro:IPR011237" /db_xref="InterPro:IPR011765" /db_xref="PFAM:PF00675" /db_xref="PFAM:PF05193" /db_xref="WormBase:CRE04742" /db_xref="WormBase:WBGene00055642" /translation="MALRLAVSSALRPAINSQVRNASSAVSVKDVLANAPQAEVTTLK NGFRVVTEDNGTATATVGVWIETGSRFENEKNNGVAHFLERLIHKGTGKRASAALESE LNAIGAKLNSFTERDQTAVFVQTGAQDVEKVVDILADVLRNSKLDASTIDSERATLLK ELDASDNYHQLVLFDMLHAAAYQGTPLALSVLGTSDSIPAITAQQLKEWQEDHYRPVR MVLSAVGGGVSNVPSLAEKYFGDLSNEYPRKVPQVDGTRFTGSEYRYRNDNVPHMYAA FAVEGVGYAHKDALALQIANQFIGQWDVTHATSRTAASRLVQKIGHDHGLQNLQHFNI NYKDTGLFGIYFVADAHDLNDTSGIMKSVAHEWKHLASATTDEEVAMAKNQFRTNLYQ SLETNTQKAGFNAKELLYSGQLRQLSELEAQIQKIDAGVVREAISRHVYDRDLAAVGV GRTEAFPNYAHVRAGMSWWRL" gene <397397..>399809 /locus_tag="CRE_04546" /db_xref="WormBase:WBGene00055643" mRNA join(<397397..399645,399692..>399809) /locus_tag="CRE_04546" /product="hypothetical protein" /db_xref="WormBase:CRE04546" /db_xref="WormBase:WBGene00055643" CDS join(397397..399645,399692..399809) /locus_tag="CRE_04546" /note="contains similarity to Pfam domains PF00271 (Helicase conserved C-terminal domain), PF04408 (Helicase associated domain (HA2)), PF07717 (Domain of unknown function (DUF1605)); contains similarity to Interpro domains IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR007502 (Helicase-associated region), IPR011709 (Region of unknown function DUF1605), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal); coded for by the following C. remanei cDNAs: DY528405, DY529427" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86735.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR007502" /db_xref="InterPro:IPR011709" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00271" /db_xref="PFAM:PF04408" /db_xref="PFAM:PF07717" /db_xref="WormBase:CRE04546" /db_xref="WormBase:WBGene00055643" /translation="MSSRHRLDLDGSGRGDRRRYFNFVFTNIFLSSEDSRSRSPKKRS RSRSPIRHSSPDRQRQTGAIGNMKVSEQLSFVSSISHIQVQINPYNSQPYSNRYWTIW EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQLGQPASQ AKLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLL REAMNSPLLDRYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKF QRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMCEETEGDILLFLTG QEEIEEACKRIDREIQNLGSDIGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRK CVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPA PETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSI TAMLSVPQCFVRPNEMKKEADEAKARFAHIDGDHLTLLNVYHAFKQSNLKFDYSYPDT TSIFSDAEDPQWCYQNFINYRTMKTADTVRTQLSRVMDKFNLRRVSTDFKSRDYYLNI RKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFI RTVTDVRPDWLLQIAPQYYDLANFPEGDTKRKLMTVMQTLQKNSGRGY" gene complement(<400254..>402067) /locus_tag="CRE_04743" /db_xref="WormBase:WBGene00055644" mRNA complement(join(<400254..400478,400529..401057, 401103..401194,401238..401351,401399..401551, 401606..401884,401939..>402067)) /locus_tag="CRE_04743" /product="hypothetical protein" /db_xref="WormBase:CRE04743" /db_xref="WormBase:WBGene00055644" CDS complement(join(400254..400478,400529..401057, 401103..401194,401238..401351,401399..401551, 401606..401884,401939..402067)) /locus_tag="CRE_04743" /note="contains similarity to Pfam domains PF05773 (RWD domain), PF01485 (IBR domain); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR006575 (RWD), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like), IPR002867 (Zinc finger, C6HC-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86726.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR002867" /db_xref="InterPro:IPR006575" /db_xref="InterPro:IPR016135" /db_xref="PFAM:PF01485" /db_xref="PFAM:PF05773" /db_xref="WormBase:CRE04743" /db_xref="WormBase:WBGene00055644" /translation="MTDDDRETQLFELEALESVLRENKLTKTSDWTNKNAVIEGIIEV GFDSISDPKVTIEGTSETGENFSLSFDILPPVRLKFRLPADYPSVSSPILELESDWMN QEQMTTCEAELVKICEDNLMMGVLYLCYQAIIDLIDQLPTRVIKLNEANVLNKNGGSI DSLKKKILGKGEEAAEEHFVNTLFDCEVCYDSFMGHNCIKFQPCAHVFCKSCTFDYYR SMAKGVVSKAMQCLAEGCKSEAQENIVKEALGDELYAKYEVTLVEKAIREMADSVECP RENCQKVAYVTDRWVFMHLKNHRNFCFRQRNLAECSYCQFSFCNLCKQTFHGISGCKW KKGDKEKLVKQWQGDDEHIKADMCRQFGGEKHVEALVERFLNEEWLDSNSKPCPKCSV SIEKNEGCHKMHCTKCDTYFCWLCAAALDKVDPYKHFQGDGTCSGRLFEGVHNFFEEE EEGDDHLFEMAFDEGSDYESDDSVDFEIEDQLEEWLEREGHFDDGPDGMGDLEAGD" gene <403282..>404349 /locus_tag="CRE_04547" /db_xref="WormBase:WBGene00055645" mRNA join(<403282..403404,403451..403575,403622..403820, 403890..404122,404166..>404349) /locus_tag="CRE_04547" /product="hypothetical protein" /db_xref="WormBase:CRE04547" /db_xref="WormBase:WBGene00055645" CDS join(403282..403404,403451..403575,403622..403820, 403890..404122,404166..404349) /locus_tag="CRE_04547" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86685.1" /db_xref="WormBase:CRE04547" /db_xref="WormBase:WBGene00055645" /translation="MKRILFLSVLTAVNAFYYKRTMYGDANEGVPASPDYVNAYYGFP SVPPHEPRRRPSFNMYPPQGYFRREHPFDFGPFGYGSSRIGDANFGEEKTERERAMEK AKPGFWRQNQRETMDRIKQIIGEQRMNMEQKHMQIRRVLSHEGDEIRSKFADLHKRLI MKNNKMASTVSPVPELSKQAKKLEKEAKKIMENRKMSVEKKQEKLDKLMLKAPESVKN ELNAMNDSGSSAPVPIPAPPLAPGQMEALNRVNPSMTSQQEILNRAQQTQAVVEARQI RVSEDGNTVEI" gene complement(<405342..>405897) /locus_tag="CRE_04744" /db_xref="WormBase:WBGene00055646" mRNA complement(join(<405342..405565,405614..405724, 405771..>405897)) /locus_tag="CRE_04744" /product="hypothetical protein" /db_xref="WormBase:CRE04744" /db_xref="WormBase:WBGene00055646" CDS complement(join(405342..405565,405614..405724, 405771..405897)) /locus_tag="CRE_04744" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8NMT6" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86681.1" /db_xref="WormBase:CRE04744" /db_xref="WormBase:WBGene00055646" /translation="MVIWPARLAEKYITTEERKAILTKVNDYAQTDDWFPALSTIIKE ISNELNGPPEPRFDTGTLSLLLSVGLAVGLTLFITCCVCAFRCCGNVKTRERRKSVER AMDNLRNSVIRRGSQFRRFDCQCIPMLCTFPCVTLTWRIYLQSFINASKIL" gene <406172..>407537 /locus_tag="CRE_04548" /db_xref="WormBase:WBGene00055647" mRNA join(<406172..406206,406263..406383,406430..406873, 406917..407177,407224..407346,407393..407462, 407515..>407537) /locus_tag="CRE_04548" /product="hypothetical protein" /db_xref="WormBase:CRE04548" /db_xref="WormBase:WBGene00055647" CDS join(406172..406206,406263..406383,406430..406873, 406917..407177,407224..407346,407393..407462, 407515..407537) /locus_tag="CRE_04548" /note="contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86772.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="WormBase:CRE04548" /db_xref="WormBase:WBGene00055647" /translation="MEILLESNDDTVVLKDGVEIPKVKPYVPILKDRNGSEYLRNEEL FRGKFLVKGLIGRGGYGQIYYGSDATFPEDVVIKIEPVIRNGKTGRRMLLEQKILYRL QGRPHVPIMCASGHTDHLNFIGIIFVAIKFSLNHLLVMQLLGPNIGDLKKRSPVRRLS STTVARIMIQGIAALRDVHSLGYIHRDVKPANMCFGVTQNTRHVLKLVDYGMVRRYKN SDGNRRKPRYRPGFRGTLRYSSVRVHDGKEQVPSDDFVSMAYSGAELLLVNLPWKLVS VEEIRQTKLDFHTPNSPFLMLTGPYFSIFCGAIFSLRSQDEPDHSSLQALLSEMTGGK SLREAYDWEENYRDALGSSTTESV" gene complement(<407807..>408704) /locus_tag="CRE_04745" /db_xref="WormBase:WBGene00078727" mRNA complement(join(<407807..407901,408236..408325, 408521..>408704)) /locus_tag="CRE_04745" /product="hypothetical protein" /db_xref="WormBase:CRE04745" /db_xref="WormBase:WBGene00078727" CDS complement(join(407807..407901,408236..408325, 408521..408704)) /locus_tag="CRE_04745" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8NMT6" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86574.1" /db_xref="WormBase:CRE04745" /db_xref="WormBase:WBGene00078727" /translation="MLSILLLLLVYQVTVILSSQWTSSQFPDLRGPSVNQCVAVLPRN KQQLYVCDPDHMLNNTQAMQLNIQLQELAVGTPCHCQRRSQCTTGIEGSGGKEGLHGF IVSIAIVKNLYMHMHSPSDT" gene <412391..>412703 /gene="Cre-nspb-12" /locus_tag="CRE_04549" /db_xref="WormBase:WBGene00055648" mRNA join(<412391..412404,412457..>412703) /gene="Cre-nspb-12" /locus_tag="CRE_04549" /product="CRE-NSPB-12 protein" /db_xref="WormBase:WBGene00055648" CDS join(412391..412404,412457..412703) /gene="Cre-nspb-12" /locus_tag="CRE_04549" /codon_start=1 /product="CRE-NSPB-12 protein" /protein_id="EFO86838.1" /db_xref="WormBase:CRE04549" /db_xref="WormBase:WBGene00055648" /translation="MFAKCFTAILLCAMIIGSHQQVVVPAYSAAYVPSAYAYPSVYSP YVAAAAYPSVWAWGSNKNKDDSAPRAFARPSALLNNQKPTSA" gene complement(<414682..>416193) /gene="Cre-mlc-3" /locus_tag="CRE_04746" /db_xref="WormBase:WBGene00055649" mRNA complement(join(<414682..414728,414785..414968, 415716..415927,416175..>416193)) /gene="Cre-mlc-3" /locus_tag="CRE_04746" /product="CRE-MLC-3 protein" /db_xref="WormBase:WBGene00055649" CDS complement(join(414682..414728,414785..414968, 415716..415927,416175..416193)) /gene="Cre-mlc-3" /locus_tag="CRE_04746" /note="contains similarity to Pfam domain PF00036 EF hand; contains similarity to Interpro domains IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand); coded for by the following C. remanei cDNAs: DR406776, DR779624, DR408245, DT936472, DY528524, DT936666" /codon_start=1 /product="CRE-MLC-3 protein" /protein_id="EFO86566.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="PFAM:PF00036" /db_xref="WormBase:CRE04746" /db_xref="WormBase:WBGene00055649" /translation="MPAPSQDVLKEIFNLYDEELDGKIDGTQIGDVARAAGLKPTQAM VVKASGQEFKRKGEKRITFEEWLPIYEQLSKEKEQGTYADFYEGLKVFDKEETGKILA AELRHILLALGERLSADEADELLKGVEDGEGMVKYEDFIKKVLAGPFPDQD" gene complement(<416816..>421738) /locus_tag="CRE_04747" /db_xref="WormBase:WBGene00055650" mRNA complement(join(<416816..416989,418062..418206, 418254..418812,418866..419244,419291..419485, 419538..419820,419866..419955,420009..420916, 420962..421582,421628..>421738)) /locus_tag="CRE_04747" /product="hypothetical protein" /db_xref="WormBase:CRE04747" /db_xref="WormBase:WBGene00055650" CDS complement(join(416816..416989,418062..418206, 418254..418812,418866..419244,419291..419485, 419538..419820,419866..419955,420009..420916, 420962..421582,421628..421738)) /locus_tag="CRE_04747" /note="contains similarity to Pfam domains PF04566 (RNA polymerase Rpb2, domain 4), PF04561 (RNA polymerase Rpb2, domain 2), PF04567 (RNA polymerase Rpb2, domain 5), PF04565 (RNA polymerase Rpb2, domain 3), PF00562 (RNA polymerase Rpb2, domain 6), PF04560 (RNA polymerase Rpb2, domain 7), PF04563 (RNA polymerase beta subunit); contains similarity to Interpro domains IPR007120 (DNA-directed RNA polymerase, subunit 2, domain 6), IPR007641 (RNA polymerase Rpb2, domain 7), IPR007644 (RNA polymerase, beta subunit, protrusion), IPR015712 (DNA-directed RNA polymerase, subunit 2), IPR007645 (RNA polymerase Rpb2, domain 3), IPR007642 (RNA polymerase Rpb2, domain 2), IPR014724 (RNA polymerase Rpb2, OB-fold), IPR007646 (RNA polymerase Rpb2, domain 4), IPR007647 (RNA polymerase Rpb2, domain 5), IPR007121 (RNA polymerase, beta subunit, conserved site); coded for by the following C. remanei cDNAs: DY525510, DR406710, DR407775" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86868.1" /db_xref="InterPro:IPR007120" /db_xref="InterPro:IPR007121" /db_xref="InterPro:IPR007641" /db_xref="InterPro:IPR007642" /db_xref="InterPro:IPR007644" /db_xref="InterPro:IPR007645" /db_xref="InterPro:IPR007646" /db_xref="InterPro:IPR007647" /db_xref="InterPro:IPR014724" /db_xref="InterPro:IPR015712" /db_xref="PFAM:PF00562" /db_xref="PFAM:PF04560" /db_xref="PFAM:PF04561" /db_xref="PFAM:PF04563" /db_xref="PFAM:PF04565" /db_xref="PFAM:PF04566" /db_xref="PFAM:PF04567" /db_xref="WormBase:CRE04747" /db_xref="WormBase:WBGene00055650" /translation="MTGGQANGRARIKSECGKDQKCMPLEDKWLLVPAFLKVRGLVKQ HLVSFDHFVNIEIRNIMQSNQKITSDANPNFYLKYLDIRVGNPSSEEGLNMTHDKITP QECRLRDMTYSAPISVDIEYTRGNQRVFKKDLIIGRMPIMLRSSKCILRDLAEEELAR VQECPYDPGGYFVVKGSEKVILIQEQLSKNRIMVGRNSSKELQCEVLSSTSERKSKTY VTMKKGKYSVRHNQLTDDVPVSIIFKAMGVESDYDIVSTIGHEEKYVSAFAQTLEECI NAGVYTQQQALAYVTSKVKARKFTPFGSLPGTSVSVLTPPKEHEAVDFLSNSMITHIA CPDGNFKMKAIYLGLMTRRLIQTELGENELDDRDFYGNKRLELAGSLLALLFEDVFKR FNSELKRIADNALMKTMAAPLDIVKHMRQDMITNTIVNAMSTGNWIIKRFRMERLGVT QVLSRLSYISALGMMTRINSTFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKN LALISHITTDSDEKPVLRLLLNSGVEDLHNVHFSHVNKPENTLIFLNGVLIGTAVDPE RVVRAVRDLRRSGLLSEFVSVSRSITNRSVFISSDGGRLCRPYIIVKNGKPMLTQDHV QQLKEGKRIFEDFVDDGIVEYLDVNEMNDALIAVYEKEIGPETTHLEIEPFTLLGVCA GLIPYPHHNQSPRNTYQCAMGKQAMGTIAYNQQKRIDSIMYLLCYPQRPLVKSKTIEL TNFEKLPAGANGIIAVMSYSGYDIEDALVLNKASLDRGYGRCLVYKHVKGTVRKYPNQ TFDRLLGPALDPNTRLPISKHKNLDQEGIVFAGARILPKQTIINKHMPVVSGESGPGP SASANTIGIAGRQVDYKDVSISYKTPTPSYAERVLLTYNEDEAHLIKVLLRQTRRPEL GDKFSSRHGQKGVCGLIAQQEDMPFNDLGMVPDMIMNPHGYPSRMTVGKLMELLSGKA GVMNGTYHYGTAFGGDQVKDVCEELAARGYNYMGKDMLTSGITGQSLSAYIYFGPIYY QKLKHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLIER LMVSSDEFKVDVCTGCGVIGSKGWCQKCRSSKSMANIKIPYACKLLFQELQSMNIVPR LDLARYTE" gene complement(<421989..>423356) /locus_tag="CRE_04748" /db_xref="WormBase:WBGene00055651" mRNA complement(join(<421989..422107,422152..422372, 422416..422789,422834..423226,423303..>423356)) /locus_tag="CRE_04748" /product="hypothetical protein" /db_xref="WormBase:CRE04748" /db_xref="WormBase:WBGene00055651" CDS complement(join(421989..422107,422152..422372, 422416..422789,422834..423226,423303..423356)) /locus_tag="CRE_04748" /note="contains similarity to Pfam domain PF00378 Enoyl-CoA hydratase/isomerase family; contains similarity to Interpro domain IPR001753 (Crotonase, core); coded for by the following C. remanei cDNAs: DR407877, DR776521, DR777902" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86785.1" /db_xref="InterPro:IPR001753" /db_xref="PFAM:PF00378" /db_xref="WormBase:CRE04748" /db_xref="WormBase:WBGene00055651" /translation="MGSSVRNLPALFRGLGGKRVYEKMSFSLSGSTKSEILVDCHGSK KVVTLNRPKALNALNLNMVREFYPKLQEWNSSSDVDLVILKGSGDKAFCAGGDVLAVV RSFKDAESGKDCTMHKDFFREEYILNHLIGTFNKQYVCLIDGIVMGGGCGLSVNGRFR VATEKTMLAMPETALGLFPDVGGSYFLSRLKGNLGMYLALSGYRLLGADAFHAGLATH FVESSALAKLENELVNMKDVNENAVDEVIRSFEPKKIPDFSLSKNLAQIRDSFGAKSV EEILLSLEKDGSDWAKKQAATLGKMSPTSLKVTHRQITEGSKMNYAKIFTMEYRLTQR FLADKDFHEGCRAILIDKDRKPKWNPATLSEVKESTIDHYFSPLPNNADLKL" gene <424046..>425280 /locus_tag="CRE_04550" /db_xref="WormBase:WBGene00055652" mRNA join(<424046..424162,424208..424292,424422..424579, 424628..424857,424995..>425280) /locus_tag="CRE_04550" /product="hypothetical protein" /db_xref="WormBase:CRE04550" /db_xref="WormBase:WBGene00055652" CDS join(424046..424162,424208..424292,424422..424579, 424628..424857,424995..425280) /locus_tag="CRE_04550" /note="contains similarity to Brugia malayi LD42289p, putative.; TR:A8P5I8; coded for by the following C. remanei cDNAs: DR780394" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86781.1" /db_xref="WormBase:CRE04550" /db_xref="WormBase:WBGene00055652" /translation="MGSSAQECGCKGARFCALCETTERVKKLRVEEDKHTHYKVFIYD PIRQLAIPTCNLNSKSSLLEIIDETSACQSVTSDDAIEIDGLTLIHDFLTEREESSIL EMIDNVEWVQSQSGRRKQDYGPKVNFKHKKVKTDSFIGMPEYADMLLNKMSDYDLKKL GNYQPFEMCNLEYEEVKKSAIEMHQDDMWIWGNRLISINLISGSVMTLSNDSKSFLCY VHMPHRSLICMADECRYDWKHGVLAHHIRGRRIALTMREAAKDFKEGGELYEKYGAEL IRLGNIRVPLSKTSA" gene <426438..>427323 /locus_tag="CRE_04551" /db_xref="WormBase:WBGene00055654" mRNA join(<426438..427157,427213..>427323) /locus_tag="CRE_04551" /product="hypothetical protein" /db_xref="WormBase:CRE04551" /db_xref="WormBase:WBGene00055654" CDS join(426438..427157,427213..427323) /locus_tag="CRE_04551" /note="coded for by the following C. remanei cDNAs: DT937285" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86907.1" /db_xref="WormBase:CRE04551" /db_xref="WormBase:WBGene00055654" /translation="MSDRSLNYSDNATLLQRDSSQFLPKIKKHTKYVLVQSVSLFSRS DPSFKTLLSICLISVTSWFSASLSHSHTLTHSLLSVLVVVLQFIASKLRLHSLPSHIF FDHPLLCSLSIISVDTFCFFFSFPSSFFLPSSSSSSSSPDRSIRTQKEILSPKGFTSP GHFFLSFSVFLPSSDLLFRILIFSETIFNMCDEAARLAKIGRQEYDLIRIHDAPNCDD QTKFECDLELARFQVIRSQIALKNVYNEEFVTPAKLRYLRDDLEAAEEHLKKLLELSQ " gene complement(<427539..>430471) /locus_tag="CRE_04749" /db_xref="WormBase:WBGene00055655" mRNA complement(join(<427539..427625,427827..428018, 428259..429246,429292..429351,429394..429557, 430131..430188,430242..430328,430386..>430471)) /locus_tag="CRE_04749" /product="hypothetical protein" /db_xref="WormBase:CRE04749" /db_xref="WormBase:WBGene00055655" CDS complement(join(427539..427625,427827..428018, 428259..429246,429292..429351,429394..429557, 430131..430188,430242..430328,430386..430471)) /locus_tag="CRE_04749" /note="contains similarity to Pfam domain PF00786 P21-Rho-binding domain; contains similarity to Interpro domain IPR000095 (PAK-box/P21-Rho-binding); coded for by the following C. remanei cDNAs: DR777871" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86676.1" /db_xref="InterPro:IPR000095" /db_xref="PFAM:PF00786" /db_xref="WormBase:CRE04749" /db_xref="WormBase:WBGene00055655" /translation="MPNDLPLLPPKNQHKHLDKTMISLPSDFRHLAHVSPMGASEIEN LRNSENVIDAVNEGSYYVKPSSSNGTIRSQKKERVGLDDAFPAPNQDDASNVRGYENQ PTSHQYINVAPPRPSRKNYKAPPPPTPPPKDTKPNLIPDAEASDPPVVFRSISKSSHV SEPLPSPKIHTPERIEAPKPYSVVIERPGDLGGAFSFGLDDCIPIMKNTSPLKTLSPL HRTLAIPRPNVETPILSPSSPPNYQDGNYMSTIRSTSAQGKKILDELDDWLDDLDDDD REQLSTISTDESGYPTLAHEKDRAFMKHLVEKYELGVEPETVRLRRKKGPAPRLPPEA LSSPTFQAPSIPPFSASRPVSMPPNRPPPSYDAPSFDAPVYEPSGLINGRNLTKQNAL DLRSSDEGVSPVMARFLFDKRIKSATMPMSIGRMTTSSGFTDLSTTSTRSDAVSSALS ALDEDPVEVLKRNEEIEEQFPPVPKPRTRKTVSTEPTMIEEGVEEEEMKRENVIGEEF EVIETSMVVDSEIENELKVTRKMEKEEEVEMKKKEEKISHLQITEVPSDFESEIDVHD ELIVTRF" gene complement(<431248..>432697) /locus_tag="CRE_04750" /db_xref="WormBase:WBGene00055656" mRNA complement(join(<431248..431509,431560..431672, 431719..431913,431982..432275,432321..432404, 432454..432576,432623..>432697)) /locus_tag="CRE_04750" /product="hypothetical protein" /db_xref="WormBase:CRE04750" /db_xref="WormBase:WBGene00055656" CDS complement(join(431248..431509,431560..431672, 431719..431913,431982..432275,432321..432404, 432454..432576,432623..432697)) /locus_tag="CRE_04750" /note="contains similarity to Pfam domain PF07914 Protein of unknown function (DUF1679); contains similarity to Interpro domains IPR012877 (Protein of unknown function DUF1679, Caenorhabditis species), IPR015897 (CHK kinase-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86629.1" /db_xref="InterPro:IPR012877" /db_xref="InterPro:IPR015897" /db_xref="PFAM:PF07914" /db_xref="WormBase:CRE04750" /db_xref="WormBase:WBGene00055656" /translation="MSEVAEVVPKIIEKIFSEVPEPFKNFNITIKPLKNSRSFWSECY QIIVKSNSEEFENRVVSPLFVKIPRISAVNLACDPDNAEENTQILQALTAREIQFYKD FKTINFPGFPFPRLYYGESFENESMAGLACEDFSGIGASIDFVPGFDDGQTLQLMESL AQFHAKTIQISEEIQLDKYTNDLYDQKWMRMLYNDTLDFEKLVPEKLVGRIQAVKHAF DEDSVQKSDELNRESGMPFVIVHNDLNTSNILWNIETGRIQAFIDFQHVSKGAVTHDI IRIFCLGLSVKNRKENTDRYLRHYYDIFKQQFPESKIPFTFHQLKQSYSDHFNYINAT SLFSLTYYYKMYKDESLDMKEESKEREEKAEEILSRAIGILDDITMQ" gene <434524..>438819 /locus_tag="CRE_04552" /db_xref="WormBase:WBGene00055657" mRNA join(<434524..434541,434601..434670,434717..434906, 435264..435674,435725..436627,436672..436745, 437100..437405,437523..437999,438067..438383, 438430..438628,438671..>438819) /locus_tag="CRE_04552" /product="hypothetical protein" /db_xref="WormBase:CRE04552" /db_xref="WormBase:WBGene00055657" CDS join(434524..434541,434601..434670,434717..434906, 435264..435674,435725..436627,436672..436745, 437100..437405,437523..437999,438067..438383, 438430..438628,438671..438819) /locus_tag="CRE_04552" /note="contains similarity to Trichomonas vaginalis G3 Variable membrane protein, putative.; TR:A2FNC4; coded for by the following C. remanei cDNAs: DR780659" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86662.1" /db_xref="WormBase:CRE04552" /db_xref="WormBase:WBGene00055657" /translation="MGKKKKPRVREEILKLFEVFEDVEFPPIPNMLPPQKSLKERLLE QEQERIEEIKAYEKRFSGKSHIPDDVFMALDRTFGGYETVNVEHSNIFKEEMDSFIKT SEPEPDQFMTERPRNAFESLHDRRPLVYWREQVIKGFKNSSMILERFMDERDLARAPN ATKRIAKAECINLQIRRYSEIMKTSLKKQTNIIAAAEEVKDRLRRQAKDPFGLFSLIP HTIKKSNKSQHERKQILLDSYKDYLQDFNYSERPGCVAISSYLDIQKRRNELKEFLNS CESRKTPVRSVSVPPKRVKENGHEKRIEKEKDRNKRKILESSDDEVIVIPKKVGKEQR LSRESGRRSTDNTQPSAENGRPKKDMMKPLPESEIFIPKKISKDRSSVELVREKKDNV DPSLERKRKEVDKRRELTQKHDQQYCETLKKAQEEHEKKMKEEEEKRKQETIRMREEY VRRQLDLNKRMEEEKRLRAIEEQERKRIEEEKKERIRRKEEAAELERIKRSITQLKEQ SLRQEEESAKKVASEEDYQFIVLPAPKFFDGWKYFKCKKPDDWTQRKEKFYNHFNWPL DEMQRDLERSEAKKSASGEPIRIPHENTSTTKIKPLYMPAKKNSNLSVAIKKRPTSPK PSTIQAKPVEEIIGEIKLLMAPSRRNIAHSISLRSQEVDYQGIYLSRLKNGYIYPFHL ADGQYWPLFFTLEDTSAVGHVESLVACSSFSGKYASRYLLTSSLEDDDRSKKFDQAYG ESDGDWFEYSQKPGRFSNRIGFKGHYSKSKESFEQQKQRARDQLHDAFANETREQDEF CRYMEGYRRGSDRNRNEFKQHLSTHLRQLVRDARLDVYSIKEMFHDIEDGVTDHPGTR DSPLELWWHTHGYRIYLHTRDHEYGMYMYDACAAYEKLLPPQLNSGNVDKFNEWCFTP MLASLHYQSKYRPFDVFSSEKVKRLSERHSKYTALINGRKFSLSQAVELCRLTTLDKY QWTILHDQLVSHFRDFPAIFQLMFDLPLNLIPRTDKIACKLLNSQFRLSCNSWSYGQS MYKKDSK" gene complement(<439488..>444858) /locus_tag="CRE_04751" /db_xref="WormBase:WBGene00055658" mRNA complement(join(<439488..439514,439581..439709, 439822..440514,440571..440765,440813..441535, 441716..442545,442666..442846,443139..443234, 443286..443416,443465..443612,443662..443808, 444661..>444858)) /locus_tag="CRE_04751" /product="hypothetical protein" /db_xref="WormBase:CRE04751" /db_xref="WormBase:WBGene00055658" CDS complement(join(439488..439514,439581..439709, 439822..440514,440571..440765,440813..441535, 441716..442545,442666..442846,443139..443234, 443286..443416,443465..443612,443662..443808, 444661..444858)) /locus_tag="CRE_04751" /note="contains similarity to Pfam domains PF07645 (Calcium binding EGF domain), PF06119 (Nidogen-like) (2)contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR000742 (EGF-like, type 3), IPR000152 (Aspartic acid and asparagine hydroxylation site), IPR006210 (EGF), IPR003886 (Nidogen, extracellular region), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site), IPR013091 (EGF calcium-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86565.1" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR003886" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013091" /db_xref="PFAM:PF06119" /db_xref="PFAM:PF07645" /db_xref="WormBase:CRE04751" /db_xref="WormBase:WBGene00055658" /translation="MQRHALIGALPPLLLLLLSTVECMKFDPERIAARLRIDEKWDEL EAFQSIKSRRGRQIQPKEISIQVTAPLFSSRLFDYGPTADDQELPQALDVGKKLDLVH PLQFFGSNYKTIYILSNGAVGFEASSRSFKSGILPGSTRFLAPFWNRNDLRNGGKVYY REVTKGRVLERGQSEIRYQYDKNVKVKSALIITWDKMQPLNTAALPEENTNTFQAAIF ITANGTFANFIYSNIGWTQGAEAGFNAGDATSHFKLPTSGTPNIMYLEEYGNTGIPGE WMFELSDLRVISCKSGIKGDTCDQECSNGEWGPDCAYCCHCSEGTCHPISGDCPRGCA TCWDGVACQTRQEKCATKTQCASNALSFNDYDRCGEPIQRCQCLNGYKGDGYNNCEGK YINVSRRTIPSQVISDIDECRANSTICHKNAVCTNTPGRYFCMCKEGFSGDGQTDCSQ SFLFQYDTHHQLPRKKNSKMEWSLKKPMKIFGETTEKLTVTSTGLIAVNELNKDGGRL EDMKLIGIAPFFGPIDLSRNGAVSVEEVDDVEVLRRVTRTIAENYNDPTFEAKSVLVV TFSNVTDGRQAKGNTFQALLIDGSGARNEKMTFVELMYRDLPWASGAEAGILSSDASS SILLPASGTEAIAQLAKNSNIKQPGTWLYRIDKPQLMPCAQPIQVPPYCDHLLSTAPR LPSKLLEEKKEDLTLPSPGAFLIDQPSETIVPTLVRGGGTVTRGRNILTVTSSPIENQ PKRPTTKTTTRPRPNFSSTPHRPIVSLSDEDFEIGPDAFEVTFPPFVTVQPELFRPNQ RLQGSQKSTQRPLPDFSIKTPLREEVTTSTESNSRVTSSNNSRSTTIPSRSPIDTEMS ENEESPFEAGSFDGETEKFDLDSLDNAFKTTKKGPELSVTPEPVQVDLTGDAHVVETS EEEEEEEKEMKTEMSTTTTSTTMAPTTTTTTMMRTEERMSTEVPPSIFVFTTTQKPRV TTTTQRRIIQQQPSVIVNSQPPKQRNEPTVNVGHAEEQSPSKLSLLMVFTVFQFKFIF LSELAILLPVMIILAWLVILVCIGAVVCCKKRNSRESSQLRAMYGAAYGVRPTAYESK RKESTYEDHLERAARLNGQSALSGQQAGKVSQYGSYWNIPLSSHSPARLSTQERQSPP SFINNGYTNQTRYAYAGHY" gene complement(<452416..>455248) /locus_tag="CRE_04752" /db_xref="WormBase:WBGene00055660" mRNA complement(join(<452416..452478,452524..453943, 453988..454080,454128..454705,454751..>455248)) /locus_tag="CRE_04752" /product="hypothetical protein" /db_xref="WormBase:CRE04752" /db_xref="WormBase:WBGene00055660" CDS complement(join(452416..452478,452524..453943, 453988..454080,454128..454705,454751..455248)) /locus_tag="CRE_04752" /note="contains similarity to Pediococcus pentosaceus Subtilisin-like serine protease.; TR:Q03I02" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86582.1" /db_xref="WormBase:CRE04752" /db_xref="WormBase:WBGene00055660" /translation="MENDRSTDKVSFQSFRTVRIIFLQNNEDDAPMSEDDTVYVSASD QPGQITINLEKDMKRKITIISEVEKPKRPRRGSVDLRRQAIVNNAIRSAQSTAYSRSR SRSKSRSRSRSRNRSRSRGRSLTRTRSASGDKMKKRSKSLQARSRSKSQGRVPPIPIE KIEEKKIDQTLLLRLPTHLSNKSVFGGRSKVAPESIQLPSPLFILTEQQVVGASEKKT VQFVTKILLTSHKLSIDDRKKLYAEMVEAEYVGTSRSSSDLSQSSDDEPEEDFQLKMY YSSKGIYIHSVQNVHKIRNGKSSKITEEKSYSNICKTKIVGDLGKSVEGFLNVTCSET VSVTNQNYTRSEHFKIGLKDSSVFGNVPISALKTTFDPTKTISFNEFVFFDNKNIGID IRHESTARMEKMWNHEVGSFGEEQSEYREVNFFFDDGKTGKDQKKTAGATVSSVVQTP KKSTENSSKSSDVSSNQSVSSSNSSASGSSISSKRAKFRTKRLKTMKKKKSDTSLKKT TKSPDRESSRKFIRPDEEPLRLSSIKSTDQRNSTANESFYHSFPTATSTPKSPKSPLN SSSILQSNIKSASKTTPNKSPLRHGSIPIKVQGEKHSDNEIDLDKSLCSKKPTASKNL ARIVESQKKKEEGLTSKPPTSPGNSVYTYSTGNANNSTYMTAKDLHDSRISSSSSAPK SLISPRGTLRVKETKVTREVRQEEGKPDEVNEKKEETVKEEKVKLDKKSRSISPATPK MKNTLNQNMVTLSTGIHSLSFSPLNSKFSVKETHQTLDVIPIKVSDDTSPSINSSFVS GQKAFKEEVQLDMMIDKKRLVLNVNFMLLAEKQPEVEIIGFSFKGNKLWEKSSEWNLS SANTTSHTKTIARQASNILEDGKEEKK" gene <456246..>460011 /gene="Cre-nekl-4" /locus_tag="CRE_04553" /db_xref="WormBase:WBGene00055661" mRNA join(<456246..456349,456400..456483,456870..456999, 457049..457121,457170..457294,457339..457451, 457497..458091,458139..458576,458626..459314, 459346..459881,459929..>460011) /gene="Cre-nekl-4" /locus_tag="CRE_04553" /product="CRE-NEKL-4 protein" /db_xref="WormBase:WBGene00055661" CDS join(456246..456349,456400..456483,456870..456999, 457049..457121,457170..457294,457339..457451, 457497..458091,458139..458576,458626..459314, 459346..459881,459929..460011) /gene="Cre-nekl-4" /locus_tag="CRE_04553" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR011989 (Armadillo-like helical), IPR002290 (Serine/threonine protein kinase), IPR000225 (Armadillo), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="CRE-NEKL-4 protein" /protein_id="EFO86710.1" /db_xref="InterPro:IPR000225" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04553" /db_xref="WormBase:WBGene00055661" /translation="MAEEEDHPLLESLSVFKLGEPSFARNECELLSRFLEDQQENSLD SLSLHQLCTNVIRNRICNRDFIGSRPAKKWIFLIFRLTRTLFREKSRIATFHSINLHA NFVQTFQFIASRFLRNEHDWNVTVVNCLNVTQKLIDNGENAQKFVECNLEDGVLVLLA TRQMTVLQHSLEILGRLSDWSTTCRENLCESNTIDVCLQLIPDGDILTQKLCVSLLRI LSCEEQAREQIRIYDGVPTLLGLLSIKNSRLQWHVAWTLAQLAEQHETSLEIAQLGGI SLIFAAISNLKPPGKAVGDWVAMLTGLTALLAQLAQASSNQQLMSNANGVYILGKLLA IRKQVVTDEPIDSWLLLQCSIFRVLRLMYTFERSRQLLKKVLPTEIFEKFVDVGNYNS LLTDYDEISRMYDDLIEENIDIMKDWEGVNERRQAVGEVGEYELLDQLGAGAFGCVYT VRKKAQSHSESPAKLFALKEIFMTNLNDRESDKSFGDMISEVKIIKQQLRHPNIVRYR RIFVENHRLYIVMDLIQGCSLRDLIVTMKEKKGNFEEKKIWAMVVQMMLALRYLHKEK QIVHRDLKPNNIMMTTNERIVITDFGLAKQKGPEYLKSAAGTIIYSCPEIVQNLPYGE KADIWSFGKIFCLHFSSHTHERSGCCIYEMCHLKPVFHSTNMLTLAMQIVEAKYDPLD EMWSDDLRSLITSCLSPDQADRPDIMKVSGMCGSRLLEYLDDVARQQATTSDMNTSVS SYSISKFDESPSSLNSSTSSYKRPGRSKVAGTGLLPPINPAPRDVILIFSGRNHSMSA GETPRVFSTSIVPLPRITNDRYGVMFPSAPSAIPNRRRVQTCSTEHPARSSSSTELKV SKQSDGLTVSSNVLRQIQDPVLTILNQIHRILVVTDKESISTTMNHQRRLVEMFRKNL LGRENDAVQMKTHLRKLASESPEEINMNLGFSDFRPVLVQSHINGYQKDQKVTRITYE QLSACIECLIVENPPVK" gene <460474..>463672 /gene="Cre-pqn-25" /locus_tag="CRE_04554" /db_xref="WormBase:WBGene00055663" mRNA join(<460474..460516,460776..460837,460882..460996, 461047..461172,461217..461556,461607..462204, 462265..462438,462659..462832,462891..463257, 463308..>463672) /gene="Cre-pqn-25" /locus_tag="CRE_04554" /product="CRE-PQN-25 protein" /db_xref="WormBase:WBGene00055663" CDS join(460474..460516,460776..460837,460882..460996, 461047..461172,461217..461556,461607..462204, 462265..462438,462659..462832,462891..463257, 463308..463672) /gene="Cre-pqn-25" /locus_tag="CRE_04554" /note="contains similarity to Pfam domain PF01683 EB module; contains similarity to Interpro domains IPR006150 (Cysteine-rich repeat), IPR013032 (EGF-like region, conserved site), IPR006149 (Nematode-specific EB region)" /codon_start=1 /product="CRE-PQN-25 protein" /protein_id="EFO86822.1" /db_xref="InterPro:IPR006149" /db_xref="InterPro:IPR006150" /db_xref="InterPro:IPR013032" /db_xref="PFAM:PF01683" /db_xref="WormBase:CRE04554" /db_xref="WormBase:WBGene00055663" /translation="MIRFLFLLELLVITVLSQCPPGLTPLFSNNNNQPLTCTPQDSCS CYSGSSRFGTLCQYASTYNNYICCYSTNTQCGTNSSPQISASGQVVSCSMNTNCASGY TCNNGVCCPNTNSNSCSNSGNNGCLTGQVLVNGQCYNSVNIGSACQRTEQCTGGSQCQ NAICQCQSGFVNVNQQCVVSNGLNCQLGTVSYQSQCISLASPGQNCVTSSQCIDNSIC NNAVCTCNSNYQLVYGYCVPFTTGNCQNTQTLVNNQCVLYSIVGETCIANQQCVGGAI CNSGTCRCQSGATAMYGYCISSSSTSCNSNQVSINGICYPTVQIGGSCSFSQQCLNNA VCTNSVCVSSFCNIQCNSNQVGDGNELSSLQLFIDLLSRCASLTNAIIMCPSGHSVLV HSSVYRILNVQMVFVSVHKELRFPMEYVHPITITMDISYNGQCYNTVSIGSQCMITQQ CLGNSQCINSFCQCPSGSTNVNGFCQGSNINCNSNQISYNGQCYNTVSIGSQCIITQQ CLGNSQCLNAFCQCPSGSTNVNGFCQGSNINCNSNQISYNGQCYNTVSIGSQCVITQQ CLGNSQCLNSFCQCASGSSNVNGFCQGSNGQCGVNQVSSSSIFSKPSTFQVLYNGQCY STVSIGNRCTITQQCLGNSQCLNSICQCPTGSNNVNGFCQSSIIEYFELSNIISTYVL QVSFNGQCYNTVSIGSQCVITQQCLGNSQCVNSFCQCPTGTSNVNGFCTTTSNANLCS AGQTVQLDNTNQPINCLVSTCPTNSFCQYSSSGQRYVCCRSTTGKKK" gene complement(<464441..>465859) /locus_tag="CRE_04753" /db_xref="WormBase:WBGene00055664" mRNA complement(join(<464441..464680,464725..464878, 464920..465335,465386..465492,465748..>465859)) /locus_tag="CRE_04753" /product="hypothetical protein" /db_xref="WormBase:CRE04753" /db_xref="WormBase:WBGene00055664" CDS complement(join(464441..464680,464725..464878, 464920..465335,465386..465492,465748..465859)) /locus_tag="CRE_04753" /note="contains similarity to Pfam domain PF00134 Cyclin, N-terminal domain; contains similarity to Interpro domains IPR006670 (Cyclin), IPR013763 (Cyclin-related), IPR006671 (Cyclin, N-terminal); coded for by the following C. remanei cDNAs: DY528734, DT934175, DR781108" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86734.1" /db_xref="InterPro:IPR006670" /db_xref="InterPro:IPR006671" /db_xref="InterPro:IPR013763" /db_xref="PFAM:PF00134" /db_xref="WormBase:CRE04753" /db_xref="WormBase:WBGene00055664" /translation="MSMLVLDEKFYIRSLRLIGFLPQSASCRIFAGDSMQKRLTSGSS AAAGKLMQDGISSTQLLHMLLQREKLLYQNYPLSLAQGEGMIGWRERNRECAWVCAAA RRIGLEMDAASLAVSIFDRVVTSVRIPGKYINCVAVGSLSIAKKLCEDHEEDAPVFLG RLRLEYSAQELKRMELKILEVLRWDANLPNLNRFVECLLSELEATFLLPSINFRKHLD FLLCDSALTSNFRWSVLALSTVSLLVEATNKHWQYPINALARLCKIPMSEVNRCRVKI SNLWSRHMLPMPSTFHLLADLDDQDSDMDIDSPLSYDPSSHPPAPSSEASEYITSPAP RALQPTPC" gene <467152..>467490 /locus_tag="CRE_04555" /db_xref="WormBase:WBGene00055665" mRNA <467152..>467490 /locus_tag="CRE_04555" /product="hypothetical protein" /db_xref="WormBase:CRE04555" /db_xref="WormBase:WBGene00055665" CDS 467152..467490 /locus_tag="CRE_04555" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86891.1" /db_xref="WormBase:CRE04555" /db_xref="WormBase:WBGene00055665" /translation="MLIKHAHRVIPRSFSYQHGHVVTCFCAIIIIDAIYKMGRKWRTK GKRAETGTCVPPGTLIYKVFRQLTTRKRNEAVRLRRVVKISGTYFQIETSGGGGQKND SKFYFLLAYL" gene complement(<470001..>470687) /locus_tag="CRE_04754" /db_xref="WormBase:WBGene00055666" mRNA complement(join(<470001..470090,470144..470287, 470366..470587,470637..>470687)) /locus_tag="CRE_04754" /product="hypothetical protein" /db_xref="WormBase:CRE04754" /db_xref="WormBase:WBGene00055666" CDS complement(join(470001..470090,470144..470287, 470366..470587,470637..470687)) /locus_tag="CRE_04754" /note="contains similarity to Anopheles gambiae str PEST AGAP008425-PA.; TR:Q7Q4J2" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86824.1" /db_xref="WormBase:CRE04754" /db_xref="WormBase:WBGene00055666" /translation="MLRNISPFVLKSTRQIKISAATSSASFNGVIPTEKIEKRYTLSS GPGGQNVQKNATKVEIRFKVNEAEWLSETLRNAIEEKLSHRINSAGELIIDSDRTRER HLNVADCFDKLRSAIYAIEKEQGKRKTSEEDEKILRERAAVATQHRLYEKRRTSEKKS LRHAAVEL" gene <471046..>473051 /locus_tag="CRE_04556" /db_xref="WormBase:WBGene00055667" mRNA join(<471046..471093,471144..471258,471451..471568, 471634..472234,472285..472381,472430..472527, 472572..472696,472742..472794,472840..>473051) /locus_tag="CRE_04556" /product="hypothetical protein" /db_xref="WormBase:CRE04556" /db_xref="WormBase:WBGene00055667" CDS join(471046..471093,471144..471258,471451..471568, 471634..472234,472285..472381,472430..472527, 472572..472696,472742..472794,472840..473051) /locus_tag="CRE_04556" /note="contains similarity to Pfam domain PF01490 Transmembrane amino acid transporter protein; contains similarity to Interpro domain IPR013057 (Amino acid transporter, transmembrane)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86747.1" /db_xref="InterPro:IPR013057" /db_xref="PFAM:PF01490" /db_xref="WormBase:CRE04556" /db_xref="WormBase:WBGene00055667" /translation="MYSSNAVHPFEMDSSKSTAASHSKGMGWPKASLFLIGHSAGAGM LAMPMAFTVMGVEMGTIMTIVCAGFSLNTGLQLGWMWPMLQEMWPEYRKICQNPYGEI ALRSYGPVARTALEIMICFAQLGYAVVLLLLAAKNASVLFHFFLSVEINQCYLIIVVA LLVWPTTMLRSPANFWQIAWLSTASSWAAVVLIVIGVLHDAPVCQKDVQHDPTDLFKS FMSYGSMVFAYAAHSSFPTCQHDMKKSSDFSYSLILTWTVISVYYLTVSYLGYFVYGS SIGDSIISSIQNVTLQQLINLMFAIHVASTIIIASSPAFLMFESLAKIPKNFNIKRFF LRSFVFLLVTLTALTFPHFGPMINLLGSSVNSLLAMILPTAFYLSLRTFQLKWKVDKK RKELPTFGEIFESTPKFILAFNCISMTFGLLAGIISTISAIRTFSNSSLPPPCYIQYF SSGLPFSSPNGTIDCCGTYRNLTVSQSDPNGFCSFRNK" gene <473459..>475163 /locus_tag="CRE_04557" /db_xref="WormBase:WBGene00055668" mRNA join(<473459..473554,473601..473785,473833..473951, 474003..474165,474221..>475163) /locus_tag="CRE_04557" /product="hypothetical protein" /db_xref="WormBase:CRE04557" /db_xref="WormBase:WBGene00055668" CDS join(473459..473554,473601..473785,473833..473951, 474003..474165,474221..475163) /locus_tag="CRE_04557" /note="contains similarity to Pfam domain PF06542 Protein of unknown function (DUF1114); contains similarity to Interpro domain IPR009497 (Protein of unknown function DUF1114)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86624.1" /db_xref="InterPro:IPR009497" /db_xref="PFAM:PF06542" /db_xref="WormBase:CRE04557" /db_xref="WormBase:WBGene00055668" /translation="MELIDKVFQNGELLENILKNVSKDGMNHLSLRLVNKVFNSEMLR LIRRNHRGIYVSNVFKSVDDEWRMEEEDVTYDVAINNQKVNSARVYAYCRFLKEVAEV KICKLTIEALPVKYTYEDLHDALINMLTGSDYDIVEEFIGTKQICRFGCDRCSDIVNN GKCKNYGPLEEYIILHPHHFHCLLVSDVLLFQIAQRCITFSDEKEEALEKLDGMISPL ISCDKLHLILTDSFGATRYRSIGEENQLSHSFPREVLDLMIVKWKVKSLKLEFQATDS ETCTVFHYGDVFAKGSFDTPFANLKVSNYTLESVEIDLKCTEIVIEEMETFLNTRQPS PFDNLVANAKRLFPTRNMLVKFPNEYCLITPENIASFIPKLMKISEMEKDRNFNSTFR IYSPNNGKNYSDYTLNIPDILNLGVRFLTEEGEENNHFLLEKVVPIPVEEERLTLGNK CRWYGKSFQLKNEMTNNRIQFQIIFEEEFLEMLSSVRDKLKQVGFLEHYLP" gene complement(<475281..>477340) /locus_tag="CRE_04755" /db_xref="WormBase:WBGene00078724" mRNA complement(join(<475281..475382,475434..475934, 476034..476508,476552..476739,477011..477176, 477228..>477340)) /locus_tag="CRE_04755" /product="hypothetical protein" /db_xref="WormBase:CRE04755" /db_xref="WormBase:WBGene00078724" CDS complement(join(475281..475382,475434..475934, 476034..476508,476552..476739,477011..477176, 477228..477340)) /locus_tag="CRE_04755" /note="contains similarity to Brugia malayi RhoGEF domain containing protein.; TR:A8Q7B5" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86539.1" /db_xref="WormBase:CRE04755" /db_xref="WormBase:WBGene00078724" /translation="MEMLETMETDNSMSIRELNEKMSNDPDLSAVNLDVLTSNGFEPF VLEFPNAEKRSVWEATFKDAKITLAKHLTAAPSWSLKTIIAHQTRPGLQLCTATVVPG KRVDSTPFLWVCASDKFSGQVAVMALDSGEITIETCSAIGNAAVTAMCTVPPPTRPRK RKIKSQKSLEQLQKESIMDINSSGSDTESSSDEGTSTAGQTTVWIGNDDGEVFVVNST ERIRSRTRDRLARLRNSVTSMCAANGNVLVATSYSNQVQLLLFRPASDGGWDLENPQT VGHVCQAPITNMQQIGKRVIIASGNSLHAFFMDTGKFQPPVEILPSSDVITLMNVTGQ YVFLSGRKSTEIYVVDVFELSVLNHFNVTSFVRSQLSGREHILREHKMGCLRVSCLTV ARHHLWIGTSAGFVLSTSIQAAKSNPTPDLRGLRSRNVKLINEMVSVCEIGHSGPCRI LLPVQTPTHSNNPSRKQKRSSLNVPTQQSSQLMLVSCGEGLDDGTATQDPSTDAINHL IFWKFS" gene <477798..>479868 /locus_tag="CRE_04558" /db_xref="WormBase:WBGene00055670" mRNA join(<477798..477830,477979..478220,478434..478951, 478973..479179,479224..479509,479553..479707, 479756..>479868) /locus_tag="CRE_04558" /product="hypothetical protein" /db_xref="WormBase:CRE04558" /db_xref="WormBase:WBGene00055670" CDS join(477798..477830,477979..478220,478434..478951, 478973..479179,479224..479509,479553..479707, 479756..479868) /locus_tag="CRE_04558" /note="contains similarity to Pfam domain PF01490 Transmembrane amino acid transporter protein; contains similarity to Interpro domain IPR013057 (Amino acid transporter, transmembrane)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86528.1" /db_xref="InterPro:IPR013057" /db_xref="PFAM:PF01490" /db_xref="WormBase:CRE04558" /db_xref="WormBase:WBGene00055670" /translation="MGLSRVWSTTDKDGPTSHINEKGIGWIIGAIFIIGETAGGGMIA LSYALTSMGLVPGLILLILCSVFSLYTALELCWTWKIMQNRWPEYRDHCRKPYGEMAY RTIGRKMRSFIAFMICITQIGFATVLVLLAAKNLSILLHFFFHLDINQCYLILIVGLA VWPATMLPSPMHFWQAALFSAGSSTLAVILVVVGLAHDAPVCSQEAPHDEPNLMKAFM AFGTFVFAFGGHATLPTIQHDMKKPAHFVHSVVLAIICKCLDRNYYFCTILYLCIAVG GYFVYGSTVGEAIIPSLQIKWIQQTVNLMIAVHVITTIVIVMSPPIQQVEALLKVPHR FGVKRFLVRSVLFWFVIFIGLTIPHFGPVLDLVSSSLKHRTISIFKIGASTMVLMTLI LPPIFYLSIRTQEVIWLEGNEKSDEAEPIHERATLKEILRITPKAILALNAAVLIFGI IGGTLSTITSIIRLADSDMAAPCYWQYFTKGLPFSGDNIGSVSCCGTFRNLTVSGQDP IGYCSNPDF" gene complement(<480188..>482513) /locus_tag="CRE_04756" /db_xref="WormBase:WBGene00055669" mRNA complement(join(<480188..480337,480382..480642, 480773..481114,481163..481520,481594..482024, 482068..482344,482389..>482513)) /locus_tag="CRE_04756" /product="hypothetical protein" /db_xref="WormBase:CRE04756" /db_xref="WormBase:WBGene00055669" CDS complement(join(480188..480337,480382..480642, 480773..481114,481163..481520,481594..482024, 482068..482344,482389..482513)) /locus_tag="CRE_04756" /note="contains similarity to Pfam domain PF00621 RhoGEF domain; contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR001331 (Guanine-nucleotide dissociation stimulator, CDC24, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86767.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR001331" /db_xref="PFAM:PF00621" /db_xref="WormBase:CRE04756" /db_xref="WormBase:WBGene00055669" /translation="MLNPNDADDSDSSTDSPPPVVPRPKRSATVSPSTRNSFYNSRRR SDANLNFFNERERQRERRRSMVRASRERSESRRSSQQNLRKTNSEPNVDMPSVREYLD YPKTKKFQIDVEALQKLLLSLPKFASASRSRINHRHDSDSGGEMTTEIEELKDAAKSI QSLQRVLAYPSQVSSDRGGNRRLPTVDPVESCLESSVFSDVDESSLATDTTDGGRRSG ISTRLGHPRGVMQFIPSIRNDQFQPTSEIRRNSISRKSSVPDGFMSNELQSDPVPNVR NRRRGIVDEMFSSSTSLLVDRPSETLAGVNRFAKLLDTFRSRPTSPEQHPSISWNPYV YSDGGEALETCGMEDSLHEADILLWKKRSRASLRRHYSVRHLAARELLDTEKSFVEGL EFLVTKYMRPLRQPLECTLIEASLVDKIFYRIPEILAHHQVLLTTLSQRIDQWHKDAI LGDVLLAHVGLGKQIIDEEGFFQFSKQSMIETYIAFVDNFKFAKASITQARQKHAFEK YYSRCCRDHPNKLDLDALLISPIQRVPRYELIVKQMLKHTPVEHEDRERLQRAQRHIH CLAVAINQHKDGSEQMEQRLREIEAIVDGLDDLVTKERTLLRHDIITLKGTERERCVF MLSDLLLVTSVKKKAKVMYTKMT" gene complement(<484103..>485687) /locus_tag="CRE_04757" /db_xref="WormBase:WBGene00055671" mRNA complement(join(<484103..484305,484355..484576, 484618..485235,485280..485579,485621..>485687)) /locus_tag="CRE_04757" /product="hypothetical protein" /db_xref="WormBase:CRE04757" /db_xref="WormBase:WBGene00055671" CDS complement(join(484103..484305,484355..484576, 484618..485235,485280..485579,485621..485687)) /locus_tag="CRE_04757" /note="contains similarity to Pfam domain PF01607 Chitin binding Peritrophin-A domain; contains similarity to Interpro domain IPR002557 (Chitin binding protein, peritrophin-A)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86642.1" /db_xref="InterPro:IPR002557" /db_xref="PFAM:PF01607" /db_xref="WormBase:CRE04757" /db_xref="WormBase:WBGene00055671" /translation="MKTSTIFLVSLIIAAVHTNFLPDCTNTADGLYPLGSCEPRFLTC SGGIALIMDCPDDLIYHEGLEFCDWRHNIFACGRAEEASAESSGDASGVATEDGSGAE VENGSDENSGESSGDELLENVCENLVNGVYSSRRCTNYYFICSSNTPRFLSCPTPLFY DPIQQKCSWKEAVEECQKEITTAAEEYIPDDQQNRDESSGSGSGHPIESCEDKSDGIY PIDECSETFLTCSEGISGIMDCPSTLFFHPSLLICDRQQNIIGCTGSPKPTPACEEDG YFSFGRCASSFTGCTNGRAIIMFCPTGLKFSQSTQMCDYEYNTLECEDRNRKESSLDD DYEKDTSNNFLTPCIHMENGLYALDCTPRVLSCQNGNERVFECPQSLVFNEQSLTCDF PETSLKCRIEDTLLIRYSAISTYDCAIDGLFSNSLCSRDYYRCHGGQLIKHECADANA VFSMVEGQCVDASNLAQCQ" gene <485994..>487182 /locus_tag="CRE_04559" /db_xref="WormBase:WBGene00055673" mRNA join(<485994..486485,486525..486710,486758..486949, 486994..>487182) /locus_tag="CRE_04559" /product="hypothetical protein" /db_xref="WormBase:CRE04559" /db_xref="WormBase:WBGene00055673" CDS join(485994..486485,486525..486710,486758..486949, 486994..487182) /locus_tag="CRE_04559" /note="coded for by the following C. remanei cDNAs: DR780346" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86744.1" /db_xref="WormBase:CRE04559" /db_xref="WormBase:WBGene00055673" /translation="MASLPRSALRELLVTRYVPKIEDIEVEEVETARAGCSVLQPKRT LQNEDIIEAQGEDVELVEDENYRSVHRIDETPKLIVKKPNVSQLRDEAVKVLRNLKKT PAETLRLERYEYLVQRWFHTSRESEKELVEYVLLHPNHRPYLFTMQCRHIYIEDLAGI ILVSKSLLSEPRETGQCLARFAIQTTIEMPFAVLYSVLENMVVENEGFQLSDGIVTAS ILSQRGNRSITHRLKTDKCKEYGQLEPELDNNGGLIASTASIRCSVKGKQHVEMQVVY RNNSSSKNPTARNRYIELEQTVKCMNRRVLIMEEQNELVEFEVEKDMIPLKNGVPPVD DLISFLKMDNSDIDSYSD" gene <488876..>493898 /locus_tag="CRE_04560" /db_xref="WormBase:WBGene00055674" mRNA join(<488876..488996,489061..489143,489194..489321, 489376..489509,489561..489796,489845..489955, 490005..490147,490191..490660,492674..492986, 493106..493131,493189..>493898) /locus_tag="CRE_04560" /product="hypothetical protein" /db_xref="WormBase:CRE04560" /db_xref="WormBase:WBGene00055674" CDS join(488876..488996,489061..489143,489194..489321, 489376..489509,489561..489796,489845..489955, 490005..490147,490191..490660,492674..492986, 493106..493131,493189..493898) /locus_tag="CRE_04560" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86869.1" /db_xref="WormBase:CRE04560" /db_xref="WormBase:WBGene00055674" /translation="MEDAPEKKRRKLTTALKEAIGAHSQKPEENIEKPIALALITQDL LNKIQASRRPQTVLEVTLKICKEKKSEAHVEEAFLSIFRKHFAILGIDSAITCWKLIE EHLNESESLNEVTIANEFIKTSNLLGHGFGKLLQTIKSNLPSVIRKTWNHGRLADSLS IAYSLVSLILAESVYGDDQTNSESVSEYWKKEILTEKSMKKNYGMRMLSLLAGEEDLR KYFLTKTEIDDNQLQLLSEIYFNHIEFFSGILHESNCIQLLGKVIDTHLESNQLRLLK NRIKTAETSLSPILYYSMIDSFRRFFEFTDTELISIENFESLKSKEVAKQLPSICSIS KKPHKMTNKNAKKLKDFLDLIRHVAEKSEDHTCLAAFSILTINIAMIFDDSKTWSVCK SILKNLPIDVLEKLVKAGKGLDNEATSILRETKNLTEERNEPRKFVNRSGSAVIEKLE ADISVEDSITLLQGVHSSEAKKDVFVFVRNPHMMTNKNAKKMKDFVDLIRHVDEKSED HTCFAAFSILTINIAMIFDDSKTWSVCKSILKNLPIDVLEKLVKAGKGLDNEAKSILR ETKNLTEERNEPRKSVARTLRVDSIVKFVEDIPGGESLNELKLYKLLIEMYGGSPIES LALQIVFARIAADGWADLDRTPGTEKTDESWFLVIVKMIDLLETAMKSAKNSIIKSYT ALYCQLFSQVLKNSQKFIRNSLNAVASKTLTSEMESEFVLRRHKLTQDVARLVDAMKR NESYFSMVRISTIMFTYILIFQLTASIIGDAVFYGSDSLLAMSKLHSLADKNTSGLLA TNLPVVERTRYKKFLSTITKASKRVY" gap 492605..492614 /estimated_length=10 gene <494745..>495053 /locus_tag="CRE_04561" /db_xref="WormBase:WBGene00055675" mRNA join(<494745..494762,494817..>495053) /locus_tag="CRE_04561" /product="hypothetical protein" /db_xref="WormBase:CRE04561" /db_xref="WormBase:WBGene00055675" CDS join(494745..494762,494817..495053) /locus_tag="CRE_04561" /note="contains similarity to Locusta migratoria Cuticle protein 19.8 (LmNCP19.8).; SW:P82166; coded for by the following C. remanei cDNAs: DR406201" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86812.1" /db_xref="WormBase:CRE04561" /db_xref="WormBase:WBGene00055675" /translation="MYYRPPTVVPCVTPMVTPAVVATPMVTPIVASPVMATPVVSPVV AAPVVAAPYAAPMVAAPYAAPMAAPYAAPMASPYGGVRFM" gene <495354..>496001 /locus_tag="CRE_04562" /db_xref="WormBase:WBGene00078743" mRNA join(<495354..495392,495441..>496001) /locus_tag="CRE_04562" /product="hypothetical protein" /db_xref="WormBase:CRE04562" /db_xref="WormBase:WBGene00078743" CDS join(495354..495392,495441..496001) /locus_tag="CRE_04562" /note="contains similarity to Cercopithecine herpesvirus 1 Large tegument protein.; TR:Q7T591" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86714.1" /db_xref="WormBase:CRE04562" /db_xref="WormBase:WBGene00078743" /translation="MDTLMGRPPGGKKGNQPPVNKQPGATPPNGPPGKATPGTPNGTS PGAGPPGTPNQPPPAAAAAPNVPKGQAPPPAPVKAPVGGPAPAPAATTAAAAAAPAAA PVAAPPAQAVAAGAPAVAAGAPAVAAAPAVAAAPAVAAAPAVAAAPVVAAAPAVAAAP VVAAAPVVAATPMITPMVYGAPMMIAQPMVAAPAPVIIL" gene complement(<496639..>498255) /gene="Cre-lon-1" /locus_tag="CRE_04758" /db_xref="WormBase:WBGene00055676" mRNA complement(join(<496639..496887,497119..497274, 497334..497396,497454..497630,497702..497907, 498180..>498255)) /gene="Cre-lon-1" /locus_tag="CRE_04758" /product="CRE-LON-1 protein" /db_xref="WormBase:WBGene00055676" CDS complement(join(496639..496887,497119..497274, 497334..497396,497454..497630,497702..497907, 498180..498255)) /gene="Cre-lon-1" /locus_tag="CRE_04758" /note="contains similarity to Pfam domain PF00188 SCP-like extracellular protein; contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR001283 (Allergen V5/Tpx-1 related)" /codon_start=1 /product="CRE-LON-1 protein" /protein_id="EFO86549.1" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR014044" /db_xref="PFAM:PF00188" /db_xref="WormBase:CRE04758" /db_xref="WormBase:WBGene00055676" /translation="MNYLTLLTLLAPTALAYNVPHGFLTGEAVTSHSGPNDLDAELQH GGDDEVKREKRGYFFPSNFQNDGGLLARSEHPNEYLKKWIVHEHNRYRRMVPASDMNM LYWSDELAASAQRHADTCDFRHSRGRINVGENIWAAPYSNYSDSISIWFNEVHNPRCG CNHAYKHCCGHYVQVVWAKTNLVGCGFSRCRDVQGVWGRGHRNVFVCHYNPQGNTVFV TARGQLYAMPAFTWASGDNGRCSNCPANAPACYQGLCYMPKNYEHPTTTTPSTTTTTT EEPTTTCSPDEDVDPNDAEAEGADDDQFRLRA" gene <498872..>498910 /locus_tag="CRE_04563" /db_xref="WormBase:WBGene00078734" mRNA <498872..>498910 /locus_tag="CRE_04563" /product="hypothetical protein" /db_xref="WormBase:CRE04563" /db_xref="WormBase:WBGene00078734" CDS 498872..498910 /locus_tag="CRE_04563" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86647.1" /db_xref="WormBase:CRE04563" /db_xref="WormBase:WBGene00078734" /translation="MLQKGRSRRWWE" gene complement(<503883..>505863) /locus_tag="CRE_04759" /db_xref="WormBase:WBGene00055679" mRNA complement(join(<503883..504017,504072..504177, 504223..504330,504382..505245,505712..>505863)) /locus_tag="CRE_04759" /product="hypothetical protein" /db_xref="WormBase:CRE04759" /db_xref="WormBase:WBGene00055679" CDS complement(join(503883..504017,504072..504177, 504223..504330,504382..505245,505712..505863)) /locus_tag="CRE_04759" /note="contains similarity to Mus musculus E2F-associated phosphoprotein (EAPP).; SW:Q5BU09" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86632.1" /db_xref="WormBase:CRE04759" /db_xref="WormBase:WBGene00055679" /translation="MINDEEFDDQQPADEVTAATMRRLAFEKMDDDYYLGGAVGDEVF DSDDEVSSDDEVKTQLRKLAGIEKEVTKDAFGRRRRRSEFEDDMDDELDRSITEYASE HLGIKPKVVEIEDAPEKEVETKKEEIVNPELDAECRNADDQWRQETENVERKMAALEL LPFDVDHTDSEVDPEMPAAVLKDKSGQAVKLVYSCKNGEVFDVETRRKLQKERRLRIA ASRLPEKQRRENLIKTVVDTFKTNDIESHERPIKKKYEEGASTSSPLASILKKKISPK KMKMEEDEVKMEVDNVEEEKNPIKRAAMDRMKEIEKNDELLYDDQEDDDNEKWVKEHR KIARGQDVPDGEADGVLSCPGCMVELTRDCQRHEIYKTQYRAMFVSNCTLDGQKMSIE KTGKEKRRERQKAKKSGKADAPVLPDDSDLYTQVKCSSCGTIVAMMDSDEIYHFFNVL AGYS" gene complement(<506189..>507996) /locus_tag="CRE_04760" /db_xref="WormBase:WBGene00055680" mRNA complement(join(<506189..506476,506518..506642, 506692..507622,507673..>507996)) /locus_tag="CRE_04760" /product="hypothetical protein" /db_xref="WormBase:CRE04760" /db_xref="WormBase:WBGene00055680" CDS complement(join(506189..506476,506518..506642, 506692..507622,507673..507996)) /locus_tag="CRE_04760" /note="contains similarity to Pfam domain PF00890 FAD binding domain; contains similarity to Interpro domains IPR010960 (Flavocytochrome c), IPR003953 (Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DY528733, DR777139" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86704.1" /db_xref="InterPro:IPR003953" /db_xref="InterPro:IPR010960" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00890" /db_xref="WormBase:CRE04760" /db_xref="WormBase:WBGene00055680" /translation="MFELPVYKIMGFFFLIFIQFFGFNPFLSNICFSLCNCPLIFTFR TVQNLMNWVLFSVAVMAPLMAAEPTVVVVGGGLAGLSASLEIITEGGRVILIEGENNT GGNSAKASSGINGAGTDTQEKLGIHDSPELLVKDTLSAGDDENDKVLVKILAEKSVEA VQFLRNVGVDLTDINLCGGHSVPRTHWIPSPKEGRPIPAGFEIMKRLRTRLNELQEKN PESFRLMTQTKMVGIIREEGKVVGVEVLSAKGEQSKVTGDSVILATGGFSADRSNDSL LSEFGKQTLGFPSTNGAFAKGDGVKIARALGAKLVGMERIQIHPTAFVDPKEPAAGTK FLAAEALRGKGALLINSEGKRFGNELGRRDYTTNRILEHAKPIGEDFQGGSAERNAAI MLMNEATIDAFGRPAFNFYAIVKKFFKKYENSEELAKALNVEYSVIKATLDDYKEIFE GKKEDPFGKKAFPVSAISPHEPIYAAIVVPAIHYTMGGLKIDEHARVIDEQEKPIDGL YAAGEVTGGVHGSNRLGGNSLLECVVFGRVAGRSGLQVATNASRSEL" gene complement(<508157..>511458) /locus_tag="CRE_04761" /db_xref="WormBase:WBGene00055681" mRNA complement(join(<508157..508341,508387..508494, 508541..508841,508889..508997,509046..509215, 509265..509538,509589..509920,509965..510071, 510120..510209,510259..510661,510713..510885, 510933..511089,511162..>511458)) /locus_tag="CRE_04761" /product="hypothetical protein" /db_xref="WormBase:CRE04761" /db_xref="WormBase:WBGene00055681" CDS complement(join(508157..508341,508387..508494, 508541..508841,508889..508997,509046..509215, 509265..509538,509589..509920,509965..510071, 510120..510209,510259..510661,510713..510885, 510933..511089,511162..511458)) /locus_tag="CRE_04761" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8Q2B9; coded for by the following C. remanei cDNAs: DR778741" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86571.1" /db_xref="WormBase:CRE04761" /db_xref="WormBase:WBGene00055681" /translation="MKTVIYLLIVLFLPFATATAGLFDLAEYRRVSYDASIGEEFLWF APDLDLREVTIKNIDDFEKRIVANIPDESLPNYVFVTSKGGQKFACSLPDVEELKKTN SPRSSKNPKIYGDALAASFYVDKCVKLRGNHWWAYTLCRGQTVEQTHGEPGQEGYVKN ILGLYDGSLTMPSYQESTEDRLLYVEELYTSGTFCDLEEYREPRKTTVRYECDSQLST NEAYVSSVAEVRPCQYLMIIKVGTLCHYPEFLPASQANTKNIGCQPYLSKKDVRLMLE RQLEETRRQDRNKKQVALSRKEFHRSLARYNAITKSSRNMYIKDDIKKKNAEMDYHAA HFNLLIASLELEGEPITKKKQDYMWKLFSTADVGDYMFYADYDSISDENRAHLWYYFN DPTWPKDQFPKDILATAVQNAYIDEVREVLQSSYNLDYDKNGFAVGIREFLKTGVVLP ETNLVIPAMDVYDTIIDINTEFSMDRYAWLQLIYLRLSEDREEFELIEKIIESIMKPQ KKRSYFPLGNISEEALSYVIDEVWDDLIEISENGPNSEIFQVESNAQKGIYEILQIIP YPKDQPKRRGKHRFNYKIFLPEDKLAHEMETEYFHLLAPIYQLLSINWFHRKNENYFH VSPTSRDFLKPSDSDDYKFHYNLARDMGFFGRMLAFTTVAKIKDFENWRDGVVDEQII TDEDLQNSFMEKPLVIDEETMDTAAFVLYDRMGPTMVNAAKRILWKKKVEGYKIKYWV KDRKLRKQAQSMQGLMKDLLSVKDDSDAFVSLGGNSGSSNKKKEIFDEKFLKKLSMLE SADDLDVDSIKESIYLTDDDFSNLDDMQHVLDLLEKAGLSKKTEVQIKMFDADGNEVQ SDELDAVAKSLLDVADTVNRMKDSERAYLKKLLEDIQAGEEEEKD" gene complement(<511888..>513977) /gene="Cre-paa-1" /locus_tag="CRE_04762" /db_xref="WormBase:WBGene00055682" mRNA complement(join(<511888..512077,512120..512199, 512251..512468,512515..513374,513425..513690, 513735..>513977)) /gene="Cre-paa-1" /locus_tag="CRE_04762" /product="CRE-PAA-1 protein" /db_xref="WormBase:WBGene00055682" CDS complement(join(511888..512077,512120..512199, 512251..512468,512515..513374,513425..513690, 513735..513977)) /gene="Cre-paa-1" /locus_tag="CRE_04762" /note="contains similarity to Pfam domain PF02985 HEAT repeat; contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR000357 (HEAT)" /codon_start=1 /product="CRE-PAA-1 protein" /protein_id="EFO86769.1" /db_xref="InterPro:IPR000357" /db_xref="InterPro:IPR011989" /db_xref="PFAM:PF02985" /db_xref="WormBase:CRE04762" /db_xref="WormBase:WBGene00055682" /translation="MSAVEETADDSLYPIAVLIDELRNEDVTLRLNSIRKLSTIALAL GVERTRNELIQFLTDTIYDEDEVLLVLAEQLGNFTPLVGGPDHVHCLLSPLENLATVE ETVVRDKAVESLRKIADKHSSASLEEHFVPMLRRLATGDWFTSRTSACGLFSVVYPRV SPAIKSELKSMFRTLCRDDTPMVRRAAAAKLGEFAKVFEKTTVVEGLHSSLTDLHVDE QDSVRLLTVESAIAFGTLLDKANKKKLVEPILIELFDDKSWRVRYMVAEKLIEIQNVL GEDMDANHLVALYTNLLKDPEGEVRCAATQRLQEFAVNLPEDKRQNIICSQLLAVAKE LVTDGNQLVKSELAGVIMGLAPLIGKEQTVSELLPLYMQLLNDQTPEVRLNIISSLDK VNEVIGAAQLSTSLLPAIVGLAEDGKWRVRLAIVQFMPLLASQLGQEFFDEKLLPLCL NWLTDHVFSIREASTLIMKELTQKFGGQWASTNIVPKMQKLQKDTNYLQRMTCLFCLN TLSEAMTQEQILKEIMPIVKDLVEDDVPNVRFNAAKSLKRIGKNLTASTLTSEVKPLL EKLGKDSDFDVRYFAEEARNGWLFLHSIVLSKKMLFRSRLVIGHITSQIGIS" gene <514910..>515592 /locus_tag="CRE_04564" /db_xref="WormBase:WBGene00055683" mRNA join(<514910..515192,515226..515417,515465..>515592) /locus_tag="CRE_04564" /product="hypothetical protein" /db_xref="WormBase:CRE04564" /db_xref="WormBase:WBGene00055683" CDS join(514910..515192,515226..515417,515465..515592) /locus_tag="CRE_04564" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86559.1" /db_xref="WormBase:CRE04564" /db_xref="WormBase:WBGene00055683" /translation="MGDGANVFNTFSFNKWADGKREEEIDKESRRRRAEQVRRVKCAS LTIFYWQIKRLKERLRKERALREAQGDGDLDLDALIEAIQRGELINMRRKPQQTDVIV PTTSEDSSRRKRGVPDDLSDDYIFNEINLYANRSVGLNQVAEKFEHSSTGGNVPQIDP LSWKFNRRNQNNEILANADTRVEQRQNNFKFNRMIKEIPK" gene <516134..>518477 /gene="Cre-skpt-1" /locus_tag="CRE_04565" /db_xref="WormBase:WBGene00055684" mRNA join(<516134..516206,517069..517147,517192..517516, 517561..517847,517897..518030,518078..518240, 518291..>518477) /gene="Cre-skpt-1" /locus_tag="CRE_04565" /product="CRE-SKPT-1 protein" /db_xref="WormBase:WBGene00055684" CDS join(516134..516206,517069..517147,517192..517516, 517561..517847,517897..518030,518078..518240, 518291..518477) /gene="Cre-skpt-1" /locus_tag="CRE_04565" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box); coded for by the following C. remanei cDNAs: DY528047, DT936573, DY527703, DY525830" /codon_start=1 /product="CRE-SKPT-1 protein" /protein_id="EFO86817.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE04565" /db_xref="WormBase:WBGene00055684" /translation="MSRFTARFTSTFGDKDDSGDENKTVFADESVPVFPCYNLYPRSS KLSVSGNSARLKSINLNDNNDIEEDTLPIRRIGARKRDNPFKKYQVPDEIVDVIFSNL RKRDLLSAMQVCQQFYAVGHVSRNWTITDVMERPITELTLITLMKRKIRILRLAGAKP DPISRVNVRMFASCMLGTSRIECLDLSRANLTVRQLLILLKPCRKLQCLSVEGNVLDD QVASCISDNKNLRELDISMTRGISINGARMISQKCNNLEQLNASWCGLSEPILRVIID NITDKLRKLNLSGSIREDGLNDELVDAFSSKADNITDLDLSDNGQLGDAVVATIMARF PKLTHLSLNRCYAMDPNIIVHLNIKPSLIFLNVHGCITENNMKLFLQMCDRLKCNTQL FNFTAKPTSNNAPFIWGHNMLEY" gap 516307..516316 /estimated_length=10 gene complement(<518782..>521614) /locus_tag="CRE_04763" /db_xref="WormBase:WBGene00055685" mRNA complement(join(<518782..519036,519086..519274, 519325..519804,519854..521059,521088..521412, 521454..>521614)) /locus_tag="CRE_04763" /product="hypothetical protein" /db_xref="WormBase:CRE04763" /db_xref="WormBase:WBGene00055685" CDS complement(join(518782..519036,519086..519274, 519325..519804,519854..521059,521088..521412, 521454..521614)) /locus_tag="CRE_04763" /note="contains similarity to Pfam domain PF00773 RNB domain; contains similarity to Interpro domain IPR001900 (Ribonuclease II and R); coded for by the following C. remanei cDNAs: DT935979, DR777925" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86697.1" /db_xref="InterPro:IPR001900" /db_xref="PFAM:PF00773" /db_xref="WormBase:CRE04763" /db_xref="WormBase:WBGene00055685" /translation="MSEVTDLETIEPPTSNSLKSTGFSGTASDNTPNSLKPVGFSQTA TGGQFGAAAPFRVKSTPRKQQPFIKNHYNSPQKNQRKIFTEYISKEEANVGIKNGSMF RGVLRINPKNYQECFLDHPKGTSYSDVLVLGQNRNRAMQNDIVIVQLSPKEEWLVNQL FWVNYVEYVKWWGLNKKVERKLGKTDNNTNKPEKRCLQNEIDDNGVTVDEVPESCLIT VGSIVRIDEKKHFRVAAGKLQLMPNSANPNVLFVATDSRIPRILIPKSEVDQEFFSRP KDFEKFLYTAKIIDWRDDSVYADGQLIKLLGVSGEIDTETERIVYEHQIDHREFTDEC ISSLPVSTAEQWTIPDSEFEYRRDFRNDIVFTIDPKTARDLDDALHAKHIDDCDGKGT PGVEIGVHIADVTFFLKEGTELDRWASERGNSTYLSQLVIPMLPRILCEQLCSLNPGV DRLAFSTVFKMSYEGELKDVWFGRSIIRSRVKLAYEHAQDFIENPDKEFEATELPGIS DGNTPTEIKEKTLMLHRVAQILRKKREDSGALRIELPKLKFVMDEAKRPQGVSIYEIK DSNKLVEEFMLLANMEVAKKIESCFPDKALLRNHPPPKEKMIKDVADQCARIGFPLDG KTSGMLSTSLRKYQGNSRLFMCIRQVISSLTIKPMQQAKYFCTFEMAPSFFHHYALNV DHYTHFTSPIRRYPDVIVHRQLAASLGYDEKCNRGAEEIQNICTRCNETKQASKEASE ESAMLYFGVFIHSTGRMTCQAVVLGVLDSSFDVLIVEYGVVKRVYVDKMKREFNKQSD QLTLFWSADPNAETGNKDEFSTLIQICSVISVVLTPVKDFDVNAVMLRPSLEQRKILG STLKDMMETDSKILE" gene <522216..>523290 /locus_tag="CRE_04566" /db_xref="WormBase:WBGene00055687" mRNA join(<522216..522260,522303..522386,522439..>523290) /locus_tag="CRE_04566" /product="hypothetical protein" /db_xref="WormBase:CRE04566" /db_xref="WormBase:WBGene00055687" CDS join(522216..522260,522303..522386,522439..523290) /locus_tag="CRE_04566" /note="contains similarity to Pfam domain PF02201 SWIB/MDM2 domain; contains similarity to Interpro domain IPR003121 (SWIB/MDM2); coded for by the following C. remanei cDNAs: DR776175, DY527604, DR781069, DT933374" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86760.1" /db_xref="InterPro:IPR003121" /db_xref="PFAM:PF02201" /db_xref="WormBase:CRE04566" /db_xref="WormBase:WBGene00055687" /translation="MATEEPITSFPMDKEAAEEEIALLVRKPGFDDLTVADIIRHMNN RFNTNFDSYKSQLKEMVIEEIKKRNQEKDSSDESGSDSDNDSDHEKEKKKKLKTEIPE EKEKVVKKEVKEEVEETKPEKPQKQKKSAKEDDSDSDSGVDDAVIKKSSKNSAPRVQS DMATTIKSSRRAAASDALKQIRYTSGGGRYANSKKNKVKDPNADNSGKFGPMTKLCYI STELQQITKDQWMKRCDVVKVLWDYIKEKNLKDPKNGQFILCDDVLKSIFNKNRIKGF GMTKFLTKHIIGTSDMVPDMREEAEAEMDKRRKEWKVRSLAFHYQSTNII" gene <524083..>525640 /locus_tag="CRE_04567" /db_xref="WormBase:WBGene00055688" mRNA join(<524083..524192,524273..524373,524422..524519, 524639..524705,524846..524979,525027..525184, 525233..525295,525520..>525640) /locus_tag="CRE_04567" /product="hypothetical protein" /db_xref="WormBase:CRE04567" /db_xref="WormBase:WBGene00055688" CDS join(524083..524192,524273..524373,524422..524519, 524639..524705,524846..524979,525027..525184, 525233..525295,525520..525640) /locus_tag="CRE_04567" /note="coded for by the following C. remanei cDNAs: DR780304" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86892.1" /db_xref="WormBase:CRE04567" /db_xref="WormBase:WBGene00055688" /translation="MSDRESRSKPKKTVIGSFLGRLSRSKSRGVDIDRKKDANQHEVA KIVPSSKSDGNIKSVSDRRSSETSHRETSEAFSAEEARMSPARRLLNRFTTFRSTGRF KSASRSSKDASSDCLNTSRSSLTAKTTSEHDLHAITSSKPNRILVSSGIPTGAQSETD LRFVTSRDSHKSVPLNEPFGFNEKSPRAFMSENDLSSAITDFPEVNRTPSYLRISCAL NGYTRSPKADLTPKAPMVMGESIVERRSKMFNHPQERKPAPGFGSPLTTTKSSESKTS EIEWFVV" gene <527499..>529676 /locus_tag="CRE_04568" /db_xref="WormBase:WBGene00055689" mRNA join(<527499..527533,528380..528581,528631..529065, 529118..529381,529569..>529676) /locus_tag="CRE_04568" /product="hypothetical protein" /db_xref="WormBase:CRE04568" /db_xref="WormBase:WBGene00055689" CDS join(527499..527533,528380..528581,528631..529065, 529118..529381,529569..529676) /locus_tag="CRE_04568" /note="contains similarity to Homo sapiens Uncharacterized protein DLGAP1; ENSEMBL:ENSP00000383013" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86779.1" /db_xref="WormBase:CRE04568" /db_xref="WormBase:WBGene00055689" /translation="MLISTDFLPGPFLTPIAPQHNNRLNSLLQNEMGNHVSTPQPIRD LISKFDQLDLCSAHKNEKDGVENIEPHKFIINQQPYQFLNEMFQVFDEIDLKKDANGN DEEKSVEESNLKISTTDAESDSGISGSSPASSKRNVEILKDTKEDEQEVTTSTPSDAH EFRRLHDKVKADLKAKMDVASKDLEHADDFPEKCQESLRAAHGNAHLLVRKKFSKFNE LIEKNINPIADDPMPVTVQDLEGFWMTIDMELKGIMKEFTKVEKYRAANWDPSAVEEE VDVADTTVKTTKPRPLITKKLTPIVSEETKKKLAEQKALAEQRRAEMRAQMRQKMKAK NQEEPVLGASEEC" gene complement(<530644..>531060) /locus_tag="CRE_04764" /db_xref="WormBase:WBGene00055690" mRNA complement(<530644..>531060) /locus_tag="CRE_04764" /product="hypothetical protein" /db_xref="WormBase:CRE04764" /db_xref="WormBase:WBGene00055690" CDS complement(530644..531060) /locus_tag="CRE_04764" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86527.1" /db_xref="WormBase:CRE04764" /db_xref="WormBase:WBGene00055690" /translation="MSEKKHIERTEKTKKSSERQGEYSSVRKWGVVKKIWKKKRNVGK KKGKTMGNGIVQISIIKNRKKVLLRNFNAVSRVMVFFSIFYLFPGAGVPSAVVSPSNP GREGSNVINDENSFLDSNIPLTEKNEENSEVIREKS" gene <538993..>541381 /gene="Cre-dnj-24" /locus_tag="CRE_04569" /db_xref="WormBase:WBGene00055691" mRNA join(<538993..539069,539360..539475,540709..541027, 541076..541223,541301..>541381) /gene="Cre-dnj-24" /locus_tag="CRE_04569" /product="CRE-DNJ-24 protein" /db_xref="WormBase:WBGene00055691" CDS join(538993..539069,539360..539475,540709..541027, 541076..541223,541301..541381) /gene="Cre-dnj-24" /locus_tag="CRE_04569" /note="contains similarity to Pfam domain PF00226 DnaJ domain; contains similarity to Interpro domains IPR015609 (Molecular chaperone, heat shock protein, Hsp40, DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal); coded for by the following C. remanei cDNAs: DR775927" /codon_start=1 /product="CRE-DNJ-24 protein" /protein_id="EFO86684.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR015609" /db_xref="PFAM:PF00226" /db_xref="WormBase:CRE04569" /db_xref="WormBase:WBGene00055691" /translation="MAPREDSPYTTLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKS KEEAEQKFKKIAQAYEILTDKKKRADLDRTENPGLHRRRSTPGYRMHSHDMFRSPFDI FREFFGNRDPFENVFFDDAFTFPDVDSYAFKNPPRSADFTTKHHYHRFPSSRVHIFYD ENKNKERDDKNSFSTVIRFSSPTEPGKNATVRKTSTSTKVVDGKKIVTKTVENGDEHI VEVHEDGELKCRTVTTPPTSPTTVTVAA" gene <542511..>543101 /locus_tag="CRE_04570" /db_xref="WormBase:WBGene00055692" mRNA join(<542511..542516,542566..542967,543018..>543101) /locus_tag="CRE_04570" /product="hypothetical protein" /db_xref="WormBase:CRE04570" /db_xref="WormBase:WBGene00055692" CDS join(542511..542516,542566..542967,543018..543101) /locus_tag="CRE_04570" /note="contains similarity to Haemophilus ducreyi Protein tonB.; SW:O51810; coded for by the following C. remanei cDNAs: DT935845" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86836.1" /db_xref="WormBase:CRE04570" /db_xref="WormBase:WBGene00055692" /translation="MKLEVSSSSFNYVIFHLLHFFNLFIFLVVIMSTGCGKKKAMKSK ETSRKSSETVQSTATPVKSVQLNPTESPKPAEAEAAPKKEEAPAPAPPVEKSKEKSKE KSKMEEKPKEKSKKSEKKSKKSQKSKKGEEKKDGDDNGYENCADMTPDELKKIAEQAD TKK" gene <544089..>544654 /gene="Cre-grl-22" /locus_tag="CRE_04571" /db_xref="WormBase:WBGene00055693" mRNA join(<544089..544427,544472..>544654) /gene="Cre-grl-22" /locus_tag="CRE_04571" /product="CRE-GRL-22 protein" /db_xref="WormBase:WBGene00055693" CDS join(544089..544427,544472..544654) /gene="Cre-grl-22" /locus_tag="CRE_04571" /note="contains similarity to Pfam domain PF04155 Ground-like domain; contains similarity to Interpro domains IPR000976 (Wilm's tumour protein), IPR007284 (Ground-like region)" /codon_start=1 /product="CRE-GRL-22 protein" /protein_id="EFO86698.1" /db_xref="InterPro:IPR000976" /db_xref="InterPro:IPR007284" /db_xref="PFAM:PF04155" /db_xref="WormBase:CRE04571" /db_xref="WormBase:WBGene00055693" /translation="MLRLTLFSIFVASSSAFLFPMAGGGGGGGCAPPPPPPSCGCAPP PPPPPPSCCPPPMCGCAPPPPPPPPPPPMCGCGCGRKKRSAEEPAIEGILNMDSNLEC NNEEIKSVLEKNMKSTPSDSLLSVRTSLPSDEFFVMCTHGLTAYSAPAGTKNCAIRKE NHFCQIFSLNESN" gene complement(<544765..>547656) /locus_tag="CRE_04765" /db_xref="WormBase:WBGene00055694" mRNA complement(join(<544765..544912,544959..545300, 545348..545640,545683..545862,545904..546416, 546461..546597,546642..546881,546928..547064, 547127..>547656)) /locus_tag="CRE_04765" /product="hypothetical protein" /db_xref="WormBase:CRE04765" /db_xref="WormBase:WBGene00055694" CDS complement(join(544765..544912,544959..545300, 545348..545640,545683..545862,545904..546416, 546461..546597,546642..546881,546928..547064, 547127..547656)) /locus_tag="CRE_04765" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00018 (SH3 domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR001452 (Src homology-3), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86639.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF00018" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE04765" /db_xref="WormBase:WBGene00055694" /translation="MSKTPPGEQVTGIHRLVSHRQRLQGIVVRRNEVFLLPTRLIPSS KDLEEDLSDVSLEEGIVETADIDELMMIDHLEKTREKKNEKGKRRVEDNRVNTINTLD QLCELYGYDVDGRDFPDDVLFDSFNEASAFSQPIFCGESHEIECVALWDYFGGDNYDD LNVHAGDSINVIAEEYQVRVVDKNYMRMPFQWSLARWMTERNVNTYLGLIPSHYIVSR QFYEDHPLLFKWPVWYHGSAEVHEVLHKLYSDRSALCPGLFAIFSPVWLNIDLEEHRC FFLMILIERDQHHDDELRELIEIERGNYGIMVNSINHFFGEMLPENEQPEKSDATEFI EFMSEIETTPFEPAIVPIHRSPLGHYELMGNRYETLYDLVHHLSTHRSALPHKLVYCR SSPLVVGRNVVPPPTPKFRKDLRCQPMIIEQWAATHFDEVTRRVECGEKTLFATKVLF DIEKRSHEAIANRLNLGDPEKAAMASYMKTLDIPRSPDDDSVETGKKRCPPHESAIRI NSPFYIDETQIEFDCRSGKDTLGKGAFGVVKKGNLVRNSEDRVPVAVKQLALKENESD ERHPAFTEMEILEMVSHPNIVEYYGFSMISGSMNGVSSAITLNLVFELMETSLDKFID KIDAILSENEQLDILSQICRGMSFLHTRTPSIVHGDLAARNVLLKKHPVYWKKYICKI TDLGLAKPCLDELHTQYDDPTKIPFKWMPPEVLSSRTLSLKTDIWAFGIVCFEVCTKM GEPYGIINASTLYQYLNDGFRHYELPNMSETIYDVALDCMRYHPSDRPTFGELVDRFL DSIIEMDGEDEVKMKQREKVTSEKQRKERMANNHKKLHDNE" gene complement(<547797..>548936) /locus_tag="CRE_04766" /db_xref="WormBase:WBGene00055695" mRNA complement(join(<547797..548050,548098..548278, 548459..548607,548653..548720,548866..>548936)) /locus_tag="CRE_04766" /product="hypothetical protein" /db_xref="WormBase:CRE04766" /db_xref="WormBase:WBGene00055695" CDS complement(join(547797..548050,548098..548278, 548459..548607,548653..548720,548866..548936)) /locus_tag="CRE_04766" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86536.1" /db_xref="WormBase:CRE04766" /db_xref="WormBase:WBGene00055695" /translation="MAIINIWIFPLLISLYSIICLLVCDFTKYIPAKNAYTIMTNHIL LLLSVWMYLKYRELKSFFRQADVPALFIKASRVNLFIGLAALTSYQLAVNFPATKINH VALIGNKLSLVLANLYIWFHAFLSLKIHDANVPRWILFLIRISLAFVVFSLAAAMIQA NWVPDPAKQYVAIDAIYEWCCYFAFSVFLLTDAFEFRFMVFKPPKLIIRGCTGYNERV FESSDASEDEETLPPLSQRYVN" gene <549408..>563624 /locus_tag="CRE_04572" /db_xref="WormBase:WBGene00055696" mRNA join(<549408..549497,549549..549654,549705..549854, 549904..549969,550068..550212,550259..550381, 551450..551558,551609..551723,551771..551949, 552056..552507,552558..552884,552930..553039, 553085..553294,553338..553527,553572..553810, 553856..554916,554963..555343,555391..556710, 556758..556900,556950..557024,557066..557284, 557330..558047,558092..558167,558215..559764, 559810..559968,560012..561082,561130..561387, 561432..561568,561618..561816,561864..562122, 562169..562252,562301..562818,562869..563507, 563556..>563624) /locus_tag="CRE_04572" /product="hypothetical protein" /db_xref="WormBase:CRE04572" /db_xref="WormBase:WBGene00055696" CDS join(549408..549497,549549..549654,549705..549854, 549904..549969,550068..550212,550259..550381, 551450..551558,551609..551723,551771..551949, 552056..552507,552558..552884,552930..553039, 553085..553294,553338..553527,553572..553810, 553856..554916,554963..555343,555391..556710, 556758..556900,556950..557024,557066..557284, 557330..558047,558092..558167,558215..559764, 559810..559968,560012..561082,561130..561387, 561432..561568,561618..561816,561864..562122, 562169..562252,562301..562818,562869..563507, 563556..563624) /locus_tag="CRE_04572" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DT935320" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86612.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE04572" /db_xref="WormBase:WBGene00055696" /translation="MQEPSPGNVQKKASSEILFADYGKNSTDGEDPTPENKRVIDLYD PVDAMSLNREKDRVVVSGIRGVLQIIKVQRNKDSDEIETPSIVKDLDMRVYRKGKINI LYSAQNVKWNQLYDQYIATTSSNGSIVCWNVSRKNKSVFKAHERSATCLDWHATAPYI LVSGSRDCTVKSYDMRVKDNHQLTFSDRNCESIRDVAMCKAPGFDDYFFTGDDGGVLR LWDLRQTRRWIFQKVAHRSFVSTLSLNPHNRQLLATGGGRDKMVKIWEWSGAELNRVS VVETTAPLGRVAWRPDKPYHLATCASVNETTVHVWDVRRPYLPYVTYDEHRDSVTDAC WPTNDFDVFLTCGKDGLVVLHNIDSGHAPISYACDVAFDVTPDGTMGVAVNSEIHAKN DAELELNAIPLKGKKIIRQIPYESFNKPIKSLVCFGVPESLTHSLPPTIFYKIAEKYI IGGVEIIQLCETNSKTARKNGLEHVAQTWRLVEALCEQAKIQEEYDRLSVEEKERIIR AWAVRKKELAEEGRRWLANLNDHYRDDVKKQVTQRLENTQHVTAFLKFSSSSGSEASD NEKVGDTDNKRNEVDRMAPNFDRLLSKQKKRKKKNAAPIDFYFGAGEANFKGGKREHL HYNEFMGLRAEAYELRDEEKERRFFCKARKQPTNAQEYEEFLMQDSEADYQAWSPMLE IYRLLLYHAEQGDMQTCATVSMVCGKKLLDAVDPYTVNGWIKCYMEMLDRLELFLVTA KIRKYCTLDSISSVSRENTTIQLAHADCDALIVNGRCTKCEVLAQADCTVCRFAIVGM TYQCNLCGHCMHADHAYEWFQKSNSCAFRGCPCPCGGNTWPDGIRTFIGNDEVKKGHR KFNHLEQQVEPISNRVDVSRLDTDSEESPDEDLEWSPANNILKNKYGEVPCKDWNTEW AQQLLQMCSLRNMKPHEIAALEEEKEREREKSETEDENPHIWSPKTQKELDESDIRRT LMYRLEDDDREKKEVIESTPTEEETYDVDREDFVWDFLASSSSEDEIVETESVVDQWP RLEQIPEEDEDFIEDEDGNEIRKVLPKEKEKKKPKLKPKPKKKGNEVARKRFVEKISN RSRGPEERPLVLFDEEMASMKEDKWDMLECDDYIHSIGHIGVPPQQFSAIYERKRRDN ERVTSPTLTFAIRNHVKTKSGLYCSTSASETDVDEELGFEKRCCESRQNGTDGIVTER EGTVKPTLSYGERALKILSMNKKELKKLKAKKEKRRIDIIYGNIFGKSNQQTAELSPD EFIVSSSSDDSDSTNSSKSTTSVFSESSASELFIPVPEATPLNVNEGYKAESEDGFSS ESTSHEQLSAEPTLRLPTPQATGDLYLKPESPKRVVVQKMKKYKKVRSALSYSVEDVG RYPDEHADNYFICINGAVPSPTQSRLSSPQVSPMQSIPSSRFSSELDPPPAPLTSIMA PSKKDSEVEKESEKHSESSEEHFDSGVQEHIHSTPPSRKTSSIITSDAPIIEPPAITS YANPIFSRITGRPRSRPVTICGSGYENVTSVNGSGMHSAPATNAVNQLFPPSSSLPTH SIFADSKNGDANVVETGNRHKLSVPSMPFAPQKKLSNGNQNNLLVTDCPPSSPNSRRE NIYVGSESKMTGSHSSLSIHSKINGTENKIMQKQPEKGKKTAEASDSDLFSTDEDLFG SEGPSDEDNGEPFFPASEDIPVIRSTKHPWENEQQYQQRLLSEKEEEEEERREEEEKE REIEAQLAVLNRHTPMMRELAKRKRRLLKPKIPPDRKPFTKAMTSLKRVKFTEEDYDV AMTVALGNLESDHPLKSDNSDFEEFVREQERCLPCQHEVKENKREKEYVNWLKNISEE NQMFFAKSLSDPCAVFQLSHLDSYMTDAEKARKTASHLIEFIKMFYFIKWEELLKIDN DFMLKEVYELWQDYRNKRPRVCRTHFRDYQFRFFASSIATKMKQYLITDESPTVKQGL LNYDWLHLKPCVNTLNDDLATIDDMMDTVVQRNPNWTTEEKAVANRYWDLFGDVPLHI ETTDRVAVPPLSEDQLEIIDESNCWTKKMIKKALYNARKYDIKLTYTKQKKQKDMFYV QERSEKVLNREWQMRLEKMVNETRHVDLAMSTFRINPNDKLIYTTDEHHPWPICQFDT GNHYVTVQPMVSRRYHQMKSRVRRKFTFRRTHKAVKNAKHIAITTDELRKLPSFKRFE PKLQKATEFKNMMSKHYKVVDRAIVENRHHLNTIVEEDDEVALIVQMLENRPFKSGKR RLDSEDVFAERREQIDYRDRDVLTRMIAEKYRKQLEDYEKHEAAKMKIMKKHWMPELR RKIHVARRVIEIGRLMVEEDVRKWMEYQYELMFAKKTFRKNSYITKKLMSNNVPVEWL DSVDDIDFEEPFSPPVYAKPLTPVARYKWNPGPSAYNSSSDEEDYDPDDEKPEDDVFV TFETQPDLPVIAGKLQNIIKEKLELADDLVDDEWEYSDDSSVSTWFDNDTDDIVNRLI NKDYVDEHIVLKERLKGPLGRKLWEVMAERQSPEPLSDEEENTSFDLMLRKDEEEKEK KQAEWMEENADLDDIGVSDGKTRKEVTKMETERDSLKYFKREDRKKEMDQIRWFFKKF ALDHSYTSEPYVWNDELHEAIATMHRSELRRVGNRIHQNMKNDYELRMMQDDMVTEII PADETSLQYKLINFLSFRNDGESFEKSSMRAADCSKMLKPIQQYEMFFGREGAYKLKS IGDDMLAYQDIRNSFKYLSRHWGDNRCISAEAVRRFVKVWWYNSKVTLQRFLSSCKVR METMETGGQIFDSMVHWYYNCQNRKIAQETFDQLEIGCLMNDILHTVDEYVEETEMLC RMTTSLEEKKAYSTMDYFDWYYFKHGYPDWYESEEDTESDSSASSVSEIIPITEDSKP NSLKANGLLSEDHASPIKIMPDQPRRASEIEEEEDHQSVNPFTRRRKSVLTGNPNKEM MDHYSKVYNKLKELEIEKRRKQEEEAAKLTVARWEQAEREKLWDIEDMEKKVHDFLMM NLSIKEKEGREDPDKIPYKDWRDVMENSEEDGYKDVPSCAMYGKSDMSTIKVLEMCGL PLSLDNQLFVMEMDECQSAATSVSDAEEIASVIEKDFVDDKFGTSPDIDDDAKSYSST RHVLKHELHFQRDLECRRLPSCVLLFKPEEFFENPTDTTREFTKWKRIIEASECPFSF NKLVMRERLIQKCREECQYGLMERYFATNERNHKSVIEVFKNCFILVVVDTELKPWDC RVVSLDDVSKPAKDKISYLRKLMVEDSQEQLVKWLEINKIDMEVYSRCPVLIVTDENL TLSHATQMSEFLIDDRVKDEWLIIKREEGVRALDAIIRMPPPPSHKLEAYKVIFKPIY DAWYKVWSFENAQSNARTPVVRKFDPVKEYLHKARMIVNYAHQHYRMKRFDSLMSKDP TEFQLVDRSDVPSASLFDSLDAAVSKFCNEDSTHLDEPSKQVVKDTLIQLATGKIPYF TTNYFGGYDYTENVCGLFTRIKNFMSFFQLGLTTQEDEENDDDRLPILRNTDFVQPDT PNAKYLDMEDCEEEIEWLRNMYEESDFHRRRFMAVLMFELAQKAMFKFAPNMGDFEKA KNRFEHLLTMHAKQRPLLDMMITKVRGTYFMPLETNLFLYNSKLITFGELVDSEIHPE DWKNKKISFEDYRRQFPKEPHAMSDFLEMNENDSDTDSGSEVRSDTSSSLGSSTESLN SSKKARRTRKTINKAQRELMLMKLRSKPVNPDEVFALEKRALGPKKWKLRRRLNEYLE SIADLDRNKLEAKLPAKKQDLLKYITDLIVNNSDTAHWSWGDLKMKTKVGLIPPVNRM RPKHFNRIMKGKKMYKPPKKYDLNDAQSNGRKWF" gene <563919..>565956 /locus_tag="CRE_04573" /db_xref="WormBase:WBGene00055697" mRNA join(<563919..564110,564276..564497,564543..565124, 565175..565375,565421..565726,565771..>565956) /locus_tag="CRE_04573" /product="hypothetical protein" /db_xref="WormBase:CRE04573" /db_xref="WormBase:WBGene00055697" CDS join(563919..564110,564276..564497,564543..565124, 565175..565375,565421..565726,565771..565956) /locus_tag="CRE_04573" /note="contains similarity to Pfam domain PF03109 ABC1 family; contains similarity to Interpro domain IPR004147 (ABC-1); coded for by the following C. remanei cDNAs: DR408556, DR775656, DR779031" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86890.1" /db_xref="InterPro:IPR004147" /db_xref="PFAM:PF03109" /db_xref="WormBase:CRE04573" /db_xref="WormBase:WBGene00055697" /translation="MISGSSKILLYRLWIQSRAVYTKTIVPSRKIAIALGIGAVSISR LRTVRCDADHQDPWLLVPQKVELKTFSIIFRCIGLFLRFSPLLITYPLTKIEAFENVW WRILLWSVQNSGPTFIKLGQWASTRRDIFSKKFCDRLSVLHIQTKRKRYFRDKKKIIN EVFGKGFMKHHGDRVFLEIEPYSIGSGCIAQVYRGVVDVAELEKATGRHIPELEGRST QKIAIKVAEKDVDKQIELDLSILRSGAWIMQQIVPSLWYLDPTGALEQFEMVLRRQVD LSNEAKALQKFSNNFQPKETGIRFPIVLGYTKKAIVETYEEGIYINKLVAEEGQPELT AKQSQAVRRRIALLGARALLKMIFVDNFVHGDLHPGNILIRFNDSENNLRGVHKAPKA ESIVKRGFDWFRSLVNWRSTPRIRFTDSPDLEDEPTLVLLDTGIAISETPKNLHNLKS LFRSVVEKRGYDVGKLLLTQSPFQQCKDPERFCRQVEKLVLKARSEKSLRTLNISALL SEMFTIVAEHKVELDSAFTTVILSVMVLEGFGRSLDPDLDLFQCARPYLLNVFV" gene <567970..>568896 /locus_tag="CRE_04574" /db_xref="WormBase:WBGene00055698" mRNA join(<567970..568164,568209..568674,568721..>568896) /locus_tag="CRE_04574" /product="hypothetical protein" /db_xref="WormBase:CRE04574" /db_xref="WormBase:WBGene00055698" CDS join(567970..568164,568209..568674,568721..568896) /locus_tag="CRE_04574" /note="contains similarity to Interpro domain IPR008254 (Flavodoxin/nitric oxide synthase); coded for by the following C. remanei cDNAs: DR407713, DR775624" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86672.1" /db_xref="InterPro:IPR008254" /db_xref="WormBase:CRE04574" /db_xref="WormBase:WBGene00055698" /translation="MTYQVPPLRPEGGPRGKESLSWLEEYLEGKDEILLYVTAALGVL MPGFVYLLYHKCHAYYERYAKKKEEQRLAEELAQSEAVVIVLGKEDGIAAPWAKVIHD KLCDEMVRKPMIWWSDSLNVKELMEFKGFCVFIAETTAGGQPTPSSEWFLEWLEDLAA DSKLRKKANFDKIRFSIVGFGSSDDGPAGFNKVARTLLKRLKILGSKQIIEVELFNTA ETDKKTMERFIEFSFELLLQMDKHLPGMGGDTDESEAPEGSSSESSSDDEETDEKHKK SK" gene <569888..>572218 /gene="Cre-paqr-2" /locus_tag="CRE_04575" /db_xref="WormBase:WBGene00055699" mRNA join(<569888..569971,570045..570134,570324..570427, 570476..570615,570780..571159,571210..572010, 572108..>572218) /gene="Cre-paqr-2" /locus_tag="CRE_04575" /product="CRE-PAQR-2 protein" /db_xref="WormBase:WBGene00055699" CDS join(569888..569971,570045..570134,570324..570427, 570476..570615,570780..571159,571210..572010, 572108..572218) /gene="Cre-paqr-2" /locus_tag="CRE_04575" /note="contains similarity to Pfam domain PF03006 Haemolysin-III related; contains similarity to Interpro domain IPR004254 (Hly-III related proteins)" /codon_start=1 /product="CRE-PAQR-2 protein" /protein_id="EFO86694.1" /db_xref="InterPro:IPR004254" /db_xref="PFAM:PF03006" /db_xref="WormBase:CRE04575" /db_xref="WormBase:WBGene00055699" /translation="MDEDDLESTTPAEAQKLLQKGNRNSFDERDMVMVLDNDQLIMEN RNSSDLQSPLRSVTDVLREAENIITDGPLQQATTLENQNVIVDQVDVEFPNTQPADGQ RFEIIVRHSKVVEQPANQQRDESMYATRQNRLATVLEGIEIDGNDGPSTSASTSTSTF KKGHRRAWSMPNAKGEKMTVAVIHDNHEEGGNQHRRRIVKYKLHPQRKTDESGAPQKH LRFVTAGHDAEIQLDHSDDDDELEVEINEEEVIIASETGEGTRAVIKRFWEARWKATN FETLPDWLQDNEYLRTGHRPPLPSFSSCFKSIFALHTETGNIWTHMYGCVAFFGIGLW FLTRPSDQMQWLEKLIYSAFFLGAVICLGMSFLFHTVACHSVEMSKLFSKLDYTGISL LIVGSFVPWIYFAFYCRPQPMIIYNAMIIILGIAAMVVSLWDKFAEPKFRPVRAAVFI AMGLSAVVPAFHLLVVDGVDYMMEESQVHLMILMGAMYIGGATLYATRVPERCFPGKC DIWVSYLHKEIAVISFFFSVSISSILKIRYGNESNSSFLGRLLGLDEPDGVQNWSPRD IGI" gap 574278..574287 /estimated_length=10 gene <576826..>577529 /locus_tag="CRE_04576" /db_xref="WormBase:WBGene00055700" mRNA join(<576826..577047,577095..577247,577295..577361, 577408..>577529) /locus_tag="CRE_04576" /product="hypothetical protein" /db_xref="WormBase:CRE04576" /db_xref="WormBase:WBGene00055700" CDS join(576826..577047,577095..577247,577295..577361, 577408..577529) /locus_tag="CRE_04576" /note="contains similarity to Pfam domain PF04979 Protein phosphatase inhibitor 2 (IPP-2); contains similarity to Interpro domain IPR007062 (Protein phosphatase inhibitor 2 (IPP-2)); coded for by the following C. remanei cDNAs: DR780202, DT935644" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86863.1" /db_xref="InterPro:IPR007062" /db_xref="PFAM:PF04979" /db_xref="WormBase:CRE04576" /db_xref="WormBase:WBGene00055700" /translation="MSSPSASAEDVKLTADGKICLDDPAEFLKRKPKKSILKMKQDTS LEGKDGRAHFDEMNILATYHPADKDYGSMKIDEPKTPYHHSDGESEGDEGVLGVPSTR PRRVSLGNAVDPEKVAEGLAHPESGKSLSSAEDSEDEGDLTEEQRAHRRDFEKKRRAH YNEGAALKMHADLDVEEEETEDGKMEH" gene <579141..>580343 /gene="Cre-dhs-9" /locus_tag="CRE_04577" /db_xref="WormBase:WBGene00055701" mRNA join(<579141..579192,579243..579508,579557..579808, 579906..580161,580210..>580343) /gene="Cre-dhs-9" /locus_tag="CRE_04577" /product="CRE-DHS-9 protein" /db_xref="WormBase:WBGene00055701" CDS join(579141..579192,579243..579508,579557..579808, 579906..580161,580210..580343) /gene="Cre-dhs-9" /locus_tag="CRE_04577" /note="contains similarity to Pfam domain PF00106 short chain dehydrogenase; contains similarity to Interpro domains IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DR409245, DR781879" /codon_start=1 /product="CRE-DHS-9 protein" /protein_id="EFO86742.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00106" /db_xref="WormBase:CRE04577" /db_xref="WormBase:WBGene00055701" /translation="MSLAGQIAIVTGASRGIGRGIALQLGEAGATVYITGRKPEESLN GKVGLTGLEETAEEITKRGGKGIARYVDHQNMEEVKNFFEIIEKDHHGQLDILVNNAY QGVTTISENMGKPFYETDPYVWDTINNVGLRNHYFCTVYAARLMAPRNKGLIVNVSSA GGLRYLFNVAYGVGKQALDRLSADTAVELAKKNVCVVSIWPGAVRTELVSKFFKDADG KPRADVKNSDIFANGETVEYPGKAVVALASDPRRMDKTGRILVTEDLGREYGFVDIDG LRPPNFRSLTFLLQHMGWNTTANFVPSWVKLPGWIMWAGSSRL" gene complement(<580462..>581931) /locus_tag="CRE_04767" /db_xref="WormBase:WBGene00055702" mRNA complement(join(<580462..580528,580573..580675, 580722..581006,581053..581140,581385..581625, 581681..>581931)) /locus_tag="CRE_04767" /product="hypothetical protein" /db_xref="WormBase:CRE04767" /db_xref="WormBase:WBGene00055702" CDS complement(join(580462..580528,580573..580675, 580722..581006,581053..581140,581385..581625, 581681..581931)) /locus_tag="CRE_04767" /note="contains similarity to Pfam domain PF10317 Serpentine type 7TM GPCR chemoreceptor Srd; contains similarity to Interpro domain IPR019421 (7TM GPCR, serpentine chemoreceptor Srd)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86808.1" /db_xref="InterPro:IPR019421" /db_xref="PFAM:PF10317" /db_xref="WormBase:CRE04767" /db_xref="WormBase:WBGene00055702" /translation="MNSSHYSANATFIGPPPTFHQILAITLMTIKIILNSIGLILNCF LLYMIVQNYQKLHKTFSILLTYTLINDCLISVTLLLTIKRIIQCHETLAMVFFGPCTY ISTSFCHVLDAVHLHALQNWILSQILLIGFRTAMLSSAQSFLSVKRTIFFCVLAWLPG LVSLVLHVTYKFSRPRLLELIHRCYDEDFSYSYISGYESFYNSPLPFTIVMLLVPNVP HYFLAYCFRHKQNHDLKRRTMSTSTLRMHTTLRKVSTMKAFLPLFLLADVLIYFFCQL EVLPPQFIEYFLGTISSSINILNPVIAICCFRPYRKMFKEYYRLILSKLSAHPKVMFS EGSSDEVVNL" gene complement(<584249..>584980) /locus_tag="CRE_04768" /db_xref="WormBase:WBGene00055703" mRNA complement(join(<584249..584425,584474..>584980)) /locus_tag="CRE_04768" /product="hypothetical protein" /db_xref="WormBase:CRE04768" /db_xref="WormBase:WBGene00055703" CDS complement(join(584249..584425,584474..584980)) /locus_tag="CRE_04768" /note="contains similarity to Pfam domain PF00538 linker histone H1 and H5 family; contains similarity to Interpro domains IPR011991 (Winged helix repressor DNA-binding), IPR005819 (Histone H5), IPR005818 (Histone H1/H5), IPR003216 (Linker histone, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86682.1" /db_xref="InterPro:IPR003216" /db_xref="InterPro:IPR005818" /db_xref="InterPro:IPR005819" /db_xref="InterPro:IPR011991" /db_xref="PFAM:PF00538" /db_xref="WormBase:CRE04768" /db_xref="WormBase:WBGene00055703" /translation="MADVADPPTVSIKAARSKVAVSAKATRKPSAPKTAKSTKSAKVN KVKTEFPITLKSPQFQSNAVPRVQKPKSAVDHPSYLVMIVEAIKKIDDRRGASHQAIH KNINTNYNLDAKLSRTHISAALKKGVTSGALIQTSGSGASGRFKVGAPKRATAASKSD STKSGSISKTTSATMSTKSTKSATKSVSVKKSKKTPAKSKKEPSKSKKPSTKNQKAPS KKTMKPKKV" gene complement(<585981..>587136) /locus_tag="CRE_04769" /db_xref="WormBase:WBGene00055704" mRNA complement(join(<585981..586377,586423..586515, 586560..586651,586702..586833,586881..586959, 587003..>587136)) /locus_tag="CRE_04769" /product="hypothetical protein" /db_xref="WormBase:CRE04769" /db_xref="WormBase:WBGene00055704" CDS complement(join(585981..586377,586423..586515, 586560..586651,586702..586833,586881..586959, 587003..587136)) /locus_tag="CRE_04769" /note="coded for by the following C. remanei cDNAs: DY524756" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86861.1" /db_xref="WormBase:CRE04769" /db_xref="WormBase:WBGene00055704" /translation="MEKPMSLLSIETVLCQMKIENLWRIRGQNQVLKMISDGAPVQGT KKWQVRTVWIEEDRIGSQYDENDQPTFVTLKGTKQTRWVSPRVICCVNANLEAIQTSI LPVSTSFCKNVLSINLESEKEESQDYFQSVLELAKRSFKLEFLCLHIKNLTEAQLLEA FRSFNLDVNMKEKISISMNANADLTPRFVEEFLSARGITKRRLLLIRRAEEGEEETLN RAAVLKFFEVGLFSYSKKTTFTRTFQNPNNVRDLRYLTVERMDREIAYSLIDDLQQRH ANGHVFYQNGAIGFTVGTSMTSGTQIEFLSLV" gene complement(<587686..>588189) /gene="Cre-glrx-21" /locus_tag="CRE_04770" /db_xref="WormBase:WBGene00055705" mRNA complement(join(<587686..587802,587902..588096, 588142..>588189)) /gene="Cre-glrx-21" /locus_tag="CRE_04770" /product="CRE-GLRX-21 protein" /db_xref="WormBase:WBGene00055705" CDS complement(join(587686..587802,587902..588096, 588142..588189)) /gene="Cre-glrx-21" /locus_tag="CRE_04770" /note="contains similarity to Pfam domain PF00462 Glutaredoxin; contains similarity to Interpro domains IPR002109 (Glutaredoxin), IPR014025 (Glutaredoxin subgroup), IPR012335 (Thioredoxin fold)" /codon_start=1 /product="CRE-GLRX-21 protein" /protein_id="EFO86715.1" /db_xref="InterPro:IPR002109" /db_xref="InterPro:IPR012335" /db_xref="InterPro:IPR014025" /db_xref="PFAM:PF00462" /db_xref="WormBase:CRE04770" /db_xref="WormBase:WBGene00055705" /translation="MGGVTSKVNVDVVQDQVKKDPVVMYTKTSCTFCNKAKDLFADVK VAYKEVNLDSLKAAQPNDYLGIVNGLVYTTRQTSVPQIFICGRFVGGYTELDALRNSG HLFEAIAQCTGENAPHE" gene complement(<588361..>590533) /locus_tag="CRE_04771" /db_xref="WormBase:WBGene00055706" mRNA complement(join(<588361..588462,588517..588613, 588659..589445,589534..589793,589848..590191, 590238..590357,590408..>590533)) /locus_tag="CRE_04771" /product="hypothetical protein" /db_xref="WormBase:CRE04771" /db_xref="WormBase:WBGene00055706" CDS complement(join(588361..588462,588517..588613, 588659..589445,589534..589793,589848..590191, 590238..590357,590408..590533)) /locus_tag="CRE_04771" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8P7N2; coded for by the following C. remanei cDNAs: DT936564" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86627.1" /db_xref="WormBase:CRE04771" /db_xref="WormBase:WBGene00055706" /translation="MSVNVRVVKRSTEETKKKEPEVKLTEKSTKLLENIEKMDVAEKL FNLEDKIAMEMTHDAIFEEFNEDYKFLRAALEEYMEGKPTTTASLAKVARLRRNTRLC HYATAQMRKEVAERMDLVDAKLLQLQNVTSEVQHIQKEIDRCLDFSAGDEGLELIPVE EFYAEAPVTLSKPDETTGNEHEQYLVRLQYEDDQRRELLSTLNELEGRRNVLQSDIRG KEVRLQGLKPKLDDLAKVAEPVFDIVGAKFKDLKLDGEQRKLSLALPAPLAVAHIHAT AYKEIHDDKMFEFRIVGSNDTVKHPKDEAETKRRRKEDESTQEKINETATKILDVHPM SLEFDIECPNEIKITMTIQYLTELKVTTAKWMVHGDSKARKSVLFCADSLMSDLFEND SGDKCPNKVGSLKIEHLKYVPFFHLLNTYTIFRLNFNSNAKSTGKPYLFIQELSGSDQ QIEGVAVTEHLRKIVKAIRQRVADRCALDSIIRDLESKKTEGLEVATDVKICSFKNCE DEAFIASIPTSLRDQISGGTSSDRFSFKLEATNGDNKKLIVFLSIPSDYPRHAALFGI NAPEDANSEIVNGIEERLNDESLYVDNPSSLKEQLSLLLKHFDLS" gene complement(<591037..>591876) /locus_tag="CRE_04772" /db_xref="WormBase:WBGene00055707" mRNA complement(join(<591037..591171,591219..591560, 591760..>591876)) /locus_tag="CRE_04772" /product="hypothetical protein" /db_xref="WormBase:CRE04772" /db_xref="WormBase:WBGene00055707" CDS complement(join(591037..591171,591219..591560, 591760..591876)) /locus_tag="CRE_04772" /note="contains similarity to Pfam domain PF00538 linker histone H1 and H5 family; contains similarity to Interpro domains IPR011991 (Winged helix repressor DNA-binding), IPR005819 (Histone H5), IPR005818 (Histone H1/H5), IPR003216 (Linker histone, N-terminal); coded for by the following C. remanei cDNAs: DQ028480" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86731.1" /db_xref="InterPro:IPR003216" /db_xref="InterPro:IPR005818" /db_xref="InterPro:IPR005819" /db_xref="InterPro:IPR011991" /db_xref="PFAM:PF00538" /db_xref="WormBase:CRE04772" /db_xref="WormBase:WBGene00055707" /translation="MANRVALPRQKAAKQASPKAPKSPKSPAARAGKAAKAEKTAVAS KIPKVQKIKTVADHPAYLVMVTAAINDLKERKGASKQAILKHISNSFHLVNAVNTEKK VRSKLALALKKGVASGALLQVTGTGASGRFKLAKAGATPKAPSTPKAAKKTSVVAPSP SEKKAKSPKKAAVKPAAKKNKKAPVTKKTSAKAEVAV" gene complement(<592539..>594721) /locus_tag="CRE_04773" /db_xref="WormBase:WBGene00055708" mRNA complement(join(<592539..592625,592681..593211, 593258..593666,593716..593856,593907..594244, 594533..>594721)) /locus_tag="CRE_04773" /product="hypothetical protein" /db_xref="WormBase:CRE04773" /db_xref="WormBase:WBGene00055708" CDS complement(join(592539..592625,592681..593211, 593258..593666,593716..593856,593907..594244, 594533..594721)) /locus_tag="CRE_04773" /note="contains similarity to Pfam domain PF01424 R3H domain; contains similarity to Interpro domain IPR001374 (Single-stranded nucleic acid binding R3H)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86584.1" /db_xref="InterPro:IPR001374" /db_xref="PFAM:PF01424" /db_xref="WormBase:CRE04773" /db_xref="WormBase:WBGene00055708" /translation="MTTENESPETSEIDDSKQNERRRSTTVIMTMNVTMPAEGETNGL RRNGSMRRRLSKQNATIEEPISLLSISDPSESSDKTVPCIEEHPEEGKEDSGEKPPIE RSDGHKLRLPGLAQKKTWSTSKSLSRESNGTEYSDRSGTDLRTFVDRTLHKSEEDRKQ LLEFEQELKNLILDESVQSKKFELPSSYHRMLLHRVAAWFGLDHNVTNKQTDIVVNKS ERTKMPDECFTDFIRHNNYVEDGFKRQNTGGSRKELHHMESFGDQTSQYGSQASLNHD LLMMRRAQSFDVAPVTGPSVMQSPQPTQHVRGLPMRQLSLNCPQQQIVGSPNSGAHGH QWAPQRSFDCSNNSYLCTGKHPIMRKAESFGGMTNGITHGCYESNVQMVCQTPPSVMV HHHHHHSHVQQPTSNYTGYQVFDEMPMGSPNYPPVSEPGMCSPGGTYYEYVPQVVQPQ QYARPIRYMSHDYNQRRPPSAGMQYMYGPPQYVQYQPIVHPEVEVIVDPVQTQPFPPV THFVVPPADQQQGYASCHQAETANSFIKASIDGGYGSMNQETESSGNAEKVEEISQ" gene complement(<600754..>606277) /locus_tag="CRE_04774" /db_xref="WormBase:WBGene00055709" mRNA complement(join(<600754..600901,600958..601127, 601700..601806,601850..602211,602256..602378, 602424..602492,602537..602976,603021..603122, 603170..603679,603727..603968,604013..604346, 604395..604544,604594..604728,604775..604923, 604969..605408,605455..605627,605669..605860, 605908..606049,606093..>606277)) /locus_tag="CRE_04774" /product="hypothetical protein" /db_xref="WormBase:CRE04774" /db_xref="WormBase:WBGene00055709" CDS complement(join(600754..600901,600958..601127, 601700..601806,601850..602211,602256..602378, 602424..602492,602537..602976,603021..603122, 603170..603679,603727..603968,604013..604346, 604395..604544,604594..604728,604775..604923, 604969..605408,605455..605627,605669..605860, 605908..606049,606093..606277)) /locus_tag="CRE_04774" /note="contains similarity to Pfam domains PF02138 (Beige/BEACH domain), PF00400 (WD domain, G-beta repeat); contains similarity to Interpro domains IPR000409 (Beige/BEACH), IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86877.1" /db_xref="InterPro:IPR000409" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="PFAM:PF02138" /db_xref="WormBase:CRE04774" /db_xref="WormBase:WBGene00055709" /translation="MTEVEFEWNESKLQALSNILPKWASGNIENPIELESVQLEAEIR WLTNRSDTVGVKQEFKRLLNTSFDPLMDYEEHQKVKEEISSRKNNFNWISDWYKIAEK LSISHIDKNTNTVTFRRLQILPNVLPILVIAHTAPQNVIIIYGKRQSLKEEIDLQTIL RHSYSNIPDGSLQTVHFLSKNLLDLYSQLFSRQIAPEFKTKHFRCLPSLWLQYNVVGP ILDKIEGDHQSKITVIPLDEATANWVKRKWTNYKYLTYLNEITGRVRGEVHNHPIFPW VCDFTSENSGFRQLNRTKYRLCKGDDQLREMYSREPSHHVPELLSDIGYMVYRARVES KEKLCRHVRRKWVPEEYPSTMSRMFQWTPDECIPEFYDDPSIFKSCHPDMSDLRYPEF VSSPEEFIIWHRKMLEDEEVSMNLHRWIDLVFGFNLSIEDSKNSLNLHLCFVEKNRRG LRTNGMVQLFNRPHPSRIPLNYNPKSDSYHLQMESFGYGMKVDLQEKTIEDVEESVDE DSHCQMFQKIKKVRRLRHKTYFSSMVSLMEMMAQIVLAPHLVGRFDDPNHIRRCIRLF AYRIPVNYRKLFDFLLNLNQDFPDCDEFAFFLSVRLNIPTTISNFSEEFSKCVSLHLL RKLDVIPPFSQRSQLLLIKEVESLKKSIRLCDHMELCVVAAFQQLLEDEEACIQAVHR LMPVITRSLSQSALEDLINPMIELIQCETSVKLLDRRFLMHVSICYGTHTFLDLFLPP IVEASASMNCDRSVVAKESIMWLAKRYGPVICAKFISSNLLRIMASCYEGFELVGFDQ EPKSVFGVILQGDETCSRIESLLSEIVLTYSVTFITVQFLPFCVDLIEQFHKRPSVQL EPGLVSVFRIVELSIRSMSDHQLMNYLEEFIIQKVIYRVLTILLDVSFQFSSVRVRNI VICKVCQLLHSITQKIGTENSRIYASQPFKLIFSTFSEIYETNEELRINMRRRSPENT LFEVPLWMVEDVVDKFAKEWGVPFLSSFCDDPAFLIPFISNTVSSSPITSQMAHSPPS SFTAYSLGSMSSGNRLFSLSASSLVSSANSLGGLSLCDSGSLSAVWCARVSAAVCGVD NYRFDHLSLCNFTGHQERIRKLAAISNENSFVSASSDKTVKLWSIKPEQDEIGCQWTY PNHTRSVHDVTILADNSIASTDGVLHVWDPFRTTLLAQLEWDSKEGNGGNIMRIENVD RHILSAICSLHSTVKLFDSRVGGWTCELKVSPGPGLTRAITVRDNGNKMAVALSNGTL AILDARNGKINALAQTNSTHTVSVNWLSDSRLLVCDADECGVFLETNPRAHIVRKLQD PVSAAVLTDNSLVTLQTGSMLRVYRNSGELQIETKIRPDELPGTPTAVLPLPLNCSYL IGSSHGAIRLMC" gene complement(<606551..>608247) /locus_tag="CRE_04775" /db_xref="WormBase:WBGene00055710" mRNA complement(join(<606551..606688,606751..607025, 607117..607580,607625..607749,607805..607935, 607983..>608247)) /locus_tag="CRE_04775" /product="hypothetical protein" /db_xref="WormBase:CRE04775" /db_xref="WormBase:WBGene00055710" CDS complement(join(606551..606688,606751..607025, 607117..607580,607625..607749,607805..607935, 607983..608247)) /locus_tag="CRE_04775" /note="contains similarity to Pfam domain PF00781 Diacylglycerol kinase catalytic domain (presumed); contains similarity to Interpro domain IPR001206 (Diacylglycerol kinase, catalytic region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86853.1" /db_xref="InterPro:IPR001206" /db_xref="PFAM:PF00781" /db_xref="WormBase:CRE04775" /db_xref="WormBase:WBGene00055710" /translation="MYGYKKPDCFLDRERKTTNLLGRTFRMSKIIGKISRIPKTLYEH KKKTIFISFLGYLGADWVYRWDKNQGIRKHYANIAVKYGQKTVSPEDRPKRIFVLVNV EGNSRSCFDAFNKNALPLFLLSGVQVDVVKADNEAQLEALAGAVDTQEADVLYVVGGD GTIGKVVTGIFRNREKAQLPVGFYPGGYDNLWLKRMIPTVFEKSEDVRHACESAMAVI EDQKQSVFAFELTTENSEVAPEYGLGDVSAGWFRQIEDTRKKFWYFSVIKRRWAYVWE MLKRSPRPIECHVEYEETCSGCEKCRPKPVIQAPAWRWWHVLTGTPKYKNNDAQKDYT GIINVKCGEKHEIDAKGAELLIENEQMNDYSQLRFRMGGNDIGRFGVVSDGFKRCSKN IVGRSTDENFYNTDILANSVSFKITSLPSYIHRLYISSNPTPKDAELTDRTITIRGTQ KKLDVFFPTSIRLEL" gene complement(<608558..>617948) /gene="Cre-pqe-1" /locus_tag="CRE_04776" /db_xref="WormBase:WBGene00055711" mRNA complement(join(<608558..608872,608916..609110, 609162..609328,609382..609753,612916..613132, 613177..613392,613443..613679,613727..613807, 614040..615484,615529..617065,617335..617421, 617472..617531,617736..617836,617879..>617948)) /gene="Cre-pqe-1" /locus_tag="CRE_04776" /product="CRE-PQE-1 protein" /db_xref="WormBase:WBGene00055711" CDS complement(join(608558..608872,608916..609110, 609162..609328,609382..609753,612916..613132, 613177..613392,613443..613679,613727..613807, 614040..615484,615529..617065,617335..617421, 617472..617531,617736..617836,617879..617948)) /gene="Cre-pqe-1" /locus_tag="CRE_04776" /note="contains similarity to Pfam domain PF00929 Exonuclease; contains similarity to Interpro domains IPR013520 (Exonuclease, RNase T and DNA polymerase III), IPR006055 (Exonuclease)" /codon_start=1 /product="CRE-PQE-1 protein" /protein_id="EFO86689.1" /db_xref="InterPro:IPR006055" /db_xref="InterPro:IPR013520" /db_xref="PFAM:PF00929" /db_xref="WormBase:CRE04776" /db_xref="WormBase:WBGene00055711" /translation="MYNGGYGGSSTFRIQDYAPVDPLNGLQGMVPPQAPTQNTAQQPA IVPNRNSQPGPSATGTPMNRIQSSGRDENPARDGGGIRRHMSTEEMRREIARSVPYIP TPINNTSTGAGSSATQPKQSTQRPKQQHNAEPRDTRPSDARKNASANSSPTNQQQQRI EKRNLPNMQSSFMPMIHQPPLPNQHGTGNPANNAQLNPGNSTSNITLNALAQMPRMLV PPPQVQMNVQQQVQGQNMQRPPGQMPFSDASRIYRVQQNPDIYVYLENHPSCNTHVIV NNNIVPLVDFVESIPVSGFAITEQAAFQLRIRLPPGHRLRLIGGQLPLWPLGAANPSG QRRQQPQVPNIPGQGAGTAVISRGPPANLSQQNVPGAAVLQRNPQQQGFPHTAGAQQL PVPFGQQNHHPMQMIPNGMSQEQQIQFLQMQHLQQQNMLRQQQQHLQQNQLRQQQDAQ QRHQQSQQRNQLRQQQEQQQHQQQAHQQHQLRQQQEQQQRQQQLHRQNQQLQNLPPRQ QPHNQQLQQHPPESRQQPAPPNVPGSQLQSQNLPLPVPPTPVLADQSGLNGSIEPPIV SILNIGISADEPPPPCAYTPSPTSSSPQAEEAAELKPVVHHQRKPTKKKKVPEVITID DDEPRRVLIKTEPLDAVVSSTSESVSNVPSSSASTRPPPNIKQERNEEATCSRNYQRP DQQEQQQQPRSAANIVSVKTEPVQPVEPVEQQQEELSNRELTLELRRLKAMLDAKIEK ERKQAEINRLAEEQVEELRIKNCALLEELQRAKDAQNRHQINPEEVETPGPVEIKINV QESQVSTSEQCIQPPAISPLSEASRSRTSSVGSDILAMRPRKKIIEESEDDDEMENTT HKKPGNSAKRSFAFSTRPKNQREKRPVTYEESDDEMPTSNKKKRLNKESSDDDDDEWD DGATISTDDDDNFNARTDRSDDDDLSNFIVDDGDEIEEEEDSEYSDQDDRTRRSDRYS KSSKNDRKSQTPRSKSPTPVKKRRDSPVRLPTRKGKSKSVDEHRNSSEAGPSTPSKPM TSEEKKAASRRKSMKTKEENREKVRLAQLERMNQYQARVGRRTRCSELSVIDPLNESL SFTINQFNRAVKETPKSNEQSSREEQRKDNRREKPAQLNKRATPSVSDDRDDDGVHIP AKRTAHANSVPGGSRDRPTTSKPPISKNRPNQAEIEAKRQKESADKKKKDREEYNSLK AKKSLTDLEKFRMNKLEKLLNINQVSRPAATSKASGSTSSSFKRVTIKQEVGSPVKRL PPPPPPPDCLDPTKGRSFVKFRKWAINAIHSALLEGHKPNPAEEAQRIELEIATLHPT NEQKYRTNAAHKIEKLRKECNSGIIEVNKNAVSHQQILTGVAKENCTVEKGRKVHIDH RKMTSEQLGPLLEPLKMTEDDLEKNGYPLFNKHPKRATIAENQYTQNKKLFLEDYDLT RTCSRCNKDFRLNPDGTIIREKDICRYHNRGKSSNGKKETFQKRYTCCNEETKFSPPG CKFSDVHVFDQLFKKELTTFVSTPRPSSHNDPRTNKAYALDCEMVYTIAGPALARLTM VDMQNVKVLDVFVKPPKEVIDPNTEFSGLTMADVQKATDTLQTCHQKLFKFVNSETVL IGQSLESDFKAMRIVHKNVIDTSVIFSSKSNTKLSLRLLTLTYLKRMIQGDNEDAVGH DSYEDAVACVDLIYFALKNPENVSKLKAIEM" gene complement(<618123..>620226) /locus_tag="CRE_04777" /db_xref="WormBase:WBGene00055712" mRNA complement(join(<618123..618237,618500..618786, 618923..619958,620016..620095,620143..>620226)) /locus_tag="CRE_04777" /product="hypothetical protein" /db_xref="WormBase:CRE04777" /db_xref="WormBase:WBGene00055712" CDS complement(join(618123..618237,618500..618786, 618923..619958,620016..620095,620143..620226)) /locus_tag="CRE_04777" /note="contains similarity to Caenorhabditis remanei Sex determining protein MOG-3.; TR:Q155W5" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86680.1" /db_xref="WormBase:CRE04777" /db_xref="WormBase:WBGene00055712" /translation="MSKDESIGWMYEGAKGSTHREDYLLGKKVDKNFEKYSDVVNTQK AETIDTIVSTRAVFNSGQSTGVKTSSLQKDIIKSEDPFVAVKVREETKRRELMDNPLM KMRLQNMLKTMMTSKNEKKKDKKVKKDKKKKKKKRSRSSSSSSSDDDVQRSKKNKRSP SPKRKRRMSGRSPESKYVRGRDINSGRGENSKVRHRSRSRSVERSRRNQRSRSRSIEK IRRRHQSRSRSIEKNRKEGERGRSRSFDKSRNSRLNSRSPKHNPSRSRNSERNPSSKH HSRSRSPDRTRRGSTSQRQHRAGSVERNRLSPKRSREEFRKSRSRSRSSDQPSSSNKN GSRKFNSHIPRHLQRRHDSVSSEVNFCNVDCFQSSDSESDHKSQRKQKGSDEEKDDAR KKSYGLVEMRKRTSEEREEEAKAPIKEYKLIKIPTGRGGNNITKQREARKALTDEEKA ARLAEMEANVKWREEIRETNVAKKRIEDEEEKEEADKTGYAPSFIRSQMREACDDMTV EKRLQSNKRGVQRSHGYMDRSFAKK" gap 622757..624471 /estimated_length=1715 gene <625633..>628411 /locus_tag="CRE_04578" /db_xref="WormBase:WBGene00055713" mRNA join(<625633..625659,625707..626132,626176..626753, 626811..626903,626953..>628411) /locus_tag="CRE_04578" /product="hypothetical protein" /db_xref="WormBase:CRE04578" /db_xref="WormBase:WBGene00055713" CDS join(625633..625659,625707..626132,626176..626753, 626811..626903,626953..628411) /locus_tag="CRE_04578" /note="contains similarity to Pediococcus pentosaceus Subtilisin-like serine protease.; TR:Q03I02; coded for by the following C. remanei cDNAs: DR776455, DY528972" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86664.1" /db_xref="WormBase:CRE04578" /db_xref="WormBase:WBGene00055713" /translation="MENDRPTDKNNEDDSPMSEDDTVYVSASDQPGQITINLEKDMKR KITIISEVEKPKRPRRGSVDLRRQAIVNNAIRSAQSTASSRSRSRSKSRSRSRSRNRS RSRGRSLTRTRSASGDKMKKRSTSLQARSRSKSQGRVPPIPIEKIEEKKIDQTLLLRL PTHLSNKSVFGGRSKVAPKSIQLPSPLFILTEQQVVGASEKKTVQFVTKILLTSHKLS IDDRKKLYAEMVEAEYVGTSRSSSDLSQSSDDEPEEDFQLKMYYSSKGIYIHSVQNVH KIQNGKSSKITEEKSYSNICKTKIVGDLGKSVEGFLNVTCSETVSVTNQNYTRSEHFK IGLKDSNVLGNIAINSLNTTFDPTKTISFNEVVKFDNKNIGIDIHHDCIAKMNKMWSH EVGSFGEEKSEYREVNFFFDEGKTGKDQQKTAGATVSSVVQTPKKSTENSSKSSDVSS NQSVSSSNSSASGSSISSKRAKFRTKRLKTMKKKKSDTSLKKTTKSPDRESSRKSIRP DEEPLRLSSIKSTDQRNSTVNESFYHSFPAATSTPKSPKSPLNSSTILQSNIKSASKT TPNKSPLRHGSIPVKVQGEKHSDNEIDLDKSLSSKKPTASKNLARIVESQKKKEEEIS SKPPTSPGNSVYMYSTGNANNSTYMTAKDLHDSRISSSSSAPKSLISPRGTLRVKETK VTREVRQEEGKPDEVNEKKEETVKEEKVKLDRKSRSISPATPKMKNTLNQNMVTLSTG IHSLSFFLLNSKFSVKETHQTLDVIPIKVSDDTSPSINSSFVSGQKAFKEEVQLDMMI DKKRLVLNVNFMLLAEKQPEVEIIGFSFKGNKLWEKSSEWNLSSANTTSHVSFILLKR YRLV" gene <632127..>635776 /locus_tag="CRE_04579" /db_xref="WormBase:WBGene00055714" mRNA join(<632127..632309,632353..632420,632739..633040, 633089..633284,633329..633557,633606..633750, 633798..633868,634277..634398,634446..634599, 634790..635201,635245..635325,635667..>635776) /locus_tag="CRE_04579" /product="hypothetical protein" /db_xref="WormBase:CRE04579" /db_xref="WormBase:WBGene00055714" CDS join(632127..632309,632353..632420,632739..633040, 633089..633284,633329..633557,633606..633750, 633798..633868,634277..634398,634446..634599, 634790..635201,635245..635325,635667..635776) /locus_tag="CRE_04579" /note="contains similarity to Pfam domains PF03137 (Organic Anion Transporter Polypeptide (OATP) family), PF07648 (Kazal-type serine protease inhibitor domain); contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR004156 (Organic anion transporter polypeptide OATP), IPR011497 (Protease inhibitor, Kazal-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86804.1" /db_xref="InterPro:IPR004156" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011497" /db_xref="PFAM:PF03137" /db_xref="PFAM:PF07648" /db_xref="WormBase:CRE04579" /db_xref="WormBase:WBGene00055714" /translation="MEKHNVQDFEEPGENLKHKIEDEDDADKLLCGYGACTPRWLQGF HNAKCLLLVLGICAFIQSFVVNAIFPVGLSTLERRFKMTSTHTGIISSWYDFAVLLVV FPVCHWGNNGHKGRWIGWGGVIMALGSLICALPHWMVDIYHPDGNSLANQTDFGQCVN RDDPACAGKPYSSWFNPYFWMFILGQTLHGVGSTPLFSIGTTYMDENVSQKASPVYLA IHAVLTSFGPVIGVFAGGFLLNLYDDFDRVDRIPMERSDPRWVGAWWVGFIISAISAL LIAFPILGFARELPEAKRHRAKDVNQCHIANGDVNAKAPRDLTKLPACVWKILSNPTF LVCIFVGIFESIIINGFAAFMPKILETLLSTNPTLASYLSSVVIFAAATGVMVGGTII RQLKLQVGGMLKMIIVCHFFALIFTTGLLSHCPQREFVGINLGYEDLTIEKSHDFSIA SKCNSDCHCKMEWNPVCDRNTGHMYYSACHAGCTAMTKNQGATEWSGCGCLTSNNTFH NLIHGIKEHPEVLNQGYCHQDCGYREYILMVTLFVTVVASFASGIPTQQIMLRVVPFD QRTLALGVNWTFVRLLGFIPGGILFGVIIDTACLEWGESCGKATSCLVYDPFKLSWTI TGLAIVCKLLSILATIIGYMTYRPSDLDNAGSIQTVDSHCHTALHLVVNDDRLPEQAI IHASYGHM" gene complement(<636055..>638086) /gene="Cre-div-1" /locus_tag="CRE_04778" /db_xref="WormBase:WBGene00055715" mRNA complement(join(<636055..636622,636668..636893, 636938..637117,637167..637346,637394..637713, 637764..637944,637996..>638086)) /gene="Cre-div-1" /locus_tag="CRE_04778" /product="CRE-DIV-1 protein" /db_xref="WormBase:WBGene00055715" CDS complement(join(636055..636622,636668..636893, 636938..637117,637167..637346,637394..637713, 637764..637944,637996..638086)) /gene="Cre-div-1" /locus_tag="CRE_04778" /note="contains similarity to Pfam domains PF04042 (DNA polymerase alpha/epsilon subunit B), PF08418 (DNA polymerase alpha subunit B N-terminal); contains similarity to Interpro domains IPR013627 (DNA polymerase alpha, subunit B N-terminal), IPR016722 (DNA polymerase alpha, subunit B), IPR007185 (DNA polymerase alpha/epsilon, subunit B); coded for by the following C. remanei cDNAs: DY526496, DY524606, DT936904, DY524899" /codon_start=1 /product="CRE-DIV-1 protein" /protein_id="EFO86586.1" /db_xref="InterPro:IPR007185" /db_xref="InterPro:IPR013627" /db_xref="InterPro:IPR016722" /db_xref="PFAM:PF04042" /db_xref="PFAM:PF08418" /db_xref="WormBase:CRE04778" /db_xref="WormBase:WBGene00055715" /translation="MAYEFDLDTLNENLEHFSLECPNQTNLIEKLDELCRNFRKTNED ICDDIASVMTNENKKVVDSSILEKLEELFEAEAKKTIHTPRSVKKPTRIPLAERSGFI LSGGPGDDDKPHHMNSSSNAKLEGHYLDFSPFQNSPANEKFFKRADPGQVISSIRGRK YQDKGLKGASKNDDKMKIVSKQPSNLYAGDKCSMVIDAKSRRMTDISQHIQKVFEEIA DWGNPLIPSVDVVYTYGQVVHDETKDNEKFGENSVALMINDEDGTMIRLDLSKITEDV TLFPGQIIAVRGTNETGEELQVDKIFTPSSLPVSPVESDTTKDIWFACGPYTAMDNCG YEQLCELLDKVVAEKPDILVLAGPFVDQKNAFLNKSTFNITYDDLMEDLLCKIKEKLI NTRTEVIIQPSASRDLCTPSVFPSPPFQFKNRKLDSIRKEIHFVSDPCIFRIGQKGIE VAVTSSEPIQGLSNSEFHRSANQENIDRIARLCSHMLTQQTLYPLEPTEVPSSMGDLL EVCRLTSSPHIVFAPTKLAPSAKSVNGSVFINSSTLAKGPTGNYVKMSINLHAGEIMP GETVADYSLIQLMKI" gene <638692..>641926 /gene="Cre-cor-1" /locus_tag="CRE_04580" /db_xref="WormBase:WBGene00055716" mRNA join(<638692..638904,639315..639422,639617..639869, 639921..640543,640592..640821,640976..641204, 641291..641488,641789..>641926) /gene="Cre-cor-1" /locus_tag="CRE_04580" /product="CRE-COR-1 protein" /db_xref="WormBase:WBGene00055716" CDS join(638692..638904,639315..639422,639617..639869, 639921..640543,640592..640821,640976..641204, 641291..641488,641789..641926) /gene="Cre-cor-1" /locus_tag="CRE_04580" /note="contains similarity to Pfam domains PF08953 (Domain of unknown function (DUF1899)), PF08954 (Domain of unknown function (DUF1900)), PF00400 (WD domain, G-beta repeat) (3)contains similarity to Interpro domains IPR015049 (Region of unknown function DUF1900), IPR001680 (WD40 repeat), IPR015505 (Coronin), IPR015943 (WD40/YVTN repeat-like), IPR015048 (Region of unknown function DUF1899); coded for by the following C. remanei cDNAs: DR778578" /codon_start=1 /product="CRE-COR-1 protein" /protein_id="EFO86678.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015048" /db_xref="InterPro:IPR015049" /db_xref="InterPro:IPR015505" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="PFAM:PF08953" /db_xref="PFAM:PF08954" /db_xref="WormBase:CRE04580" /db_xref="WormBase:WBGene00055716" /translation="MREHLRGRRHPQILAYLLLTLSSFRFYLFRKLTESCIFSLQIEM AQIVRQSKFRHVFCKPVKHESCMSDIRVTEITWDSLFCDVNPKFIAFINRGAGGPFMV VPVNKIGRIDKDYPFVDAHKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLSRN LTEPAVELTGHQKRVNTIAWHPVANNVLLTAGGENVMFMWNVGTGEALLEISGHPDQI WSINFNYDGSQFVTTCKDKKIRILDSHTGEVLHEGTGHEGVKPQRAIFVKDGLVLTTG FTKRSERLYSLRAPENLSNPIVEEELDTSNGVLFPFYDEDSGLVYLVGKGDCAIRYYE VNNEAPFVHYINTYTTNEPQRAIGFQSKRGMSSEENEINRIYKLTTKGVVDILQFFVP RKSDLFQHDLYPDTRSTIPALTAEEFMEGMIQSLINQKLTKIRSGKNAAPNRQPVNAA AAAAAAKPKVQVAKKANILSTLAPTAADVVQSQSYAERPPSSQQPSPRPSSSPRPRPV VDEDMGIVPMREAPPSRPASSRASRTEIPPKEEKGPDPMKPKQAVTLKSRAARDEPGS GSQTPGQRRAAAELERIKRDQSRTADEDTLAPPPQPTRASASPRGSVSSASDHVPQNM DELLEDLMKMKAVLRQHERRIRMLEEEIADRNMSNAYSF" gene <642224..>643488 /locus_tag="CRE_04581" /db_xref="WormBase:WBGene00055718" mRNA join(<642224..642375,642629..642826,642882..643001, 643224..>643488) /locus_tag="CRE_04581" /product="hypothetical protein" /db_xref="WormBase:CRE04581" /db_xref="WormBase:WBGene00055718" CDS join(642224..642375,642629..642826,642882..643001, 643224..643488) /locus_tag="CRE_04581" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86728.1" /db_xref="WormBase:CRE04581" /db_xref="WormBase:WBGene00055718" /translation="MALLILVFSIIISFVGPPTAEAFLASAFSSVSQAGKTSNCHDWS EYGPCFSTSDRSFWRNLPQQCYQNRYMSLITGIGNPIVQKVMDYAELFNKSATACGMC NVQVACSPRCDYVAGGNSFGVVDRICDLPTEKQACAMTPQAYDEDSGLCKVWPPRHTT AVDFLGALVPPNIRDQVWSLKPLNCISISGKCYCCCAPYTPNPCDAQCTLHPCSRRQT FSKTQIKILRRKWLQKQEEQQEEREE" gene complement(<643697..>644347) /locus_tag="CRE_04779" /db_xref="WormBase:WBGene00055719" mRNA complement(join(<643697..643843,643894..644161, 644205..>644347)) /locus_tag="CRE_04779" /product="hypothetical protein" /db_xref="WormBase:CRE04779" /db_xref="WormBase:WBGene00055719" CDS complement(join(643697..643843,643894..644161, 644205..644347)) /locus_tag="CRE_04779" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86874.1" /db_xref="WormBase:CRE04779" /db_xref="WormBase:WBGene00055719" /translation="MSELCDSLSVVYTDSPKIEDHLFAKAIRWADQNPEDTIFWARRK ALEKVPEVDVEWSSKVRALRRIRFGYNKKNLMNACIDKAIKASMDSEIAAFICSCNLP INCSQLGSLLAALASFCHGNDGRAVVVIDLRESEEAWEKADPDETDPFENWDFLEEEE EGKEEKTGNSVVEETEQKKGIQIYL" gene complement(<644476..>645767) /gene="Cre-bbs-5" /locus_tag="CRE_04780" /db_xref="WormBase:WBGene00055720" mRNA complement(join(<644476..644721,644771..645516, 645564..645646,645694..>645767)) /gene="Cre-bbs-5" /locus_tag="CRE_04780" /product="CRE-BBS-5 protein" /db_xref="WormBase:WBGene00055720" CDS complement(join(644476..644721,644771..645516, 645564..645646,645694..645767)) /gene="Cre-bbs-5" /locus_tag="CRE_04780" /note="contains similarity to Pfam domain PF07289 Protein of unknown function (DUF1448); contains similarity to Interpro domains IPR006606 (Protein of unknown function DUF1448), IPR014003 (Protein of unknown function DM16)" /codon_start=1 /product="CRE-BBS-5 protein" /protein_id="EFO86825.1" /db_xref="InterPro:IPR006606" /db_xref="InterPro:IPR014003" /db_xref="PFAM:PF07289" /db_xref="WormBase:CRE04780" /db_xref="WormBase:WBGene00055720" /translation="MDRMERVNGEDIWQDREIRFDVDHKLLRMAKGEFAVAKVEHVED TKGNNGDKGIMKVTNLRLIWYAMNMPRINISIGWNTITGTQSKTSTSLAARNRGGTNE AIYILAKLSSTTTKFEFIFTATSPNSHSKLFNTISSINRAYETTKMYRELKMRGIFIR EDGTLRILPQEYIVEIVAGAWNLSTETVCLRLDFLIYIKLIQGSLGVFVITNIRIVWY AELNTGYNVSVPYLTLYSARVRESKFGMALVLETTASSGEYVLGFKVDPPERLQNLVK TIQTLHKAQSMKPIFGVTFIKEKSEKTERKEVTKEDEEIDIIDTNEDDVEIEKNIRPD PFAAYFDGQHSTTDEKKLPVLNQEIGLSMEPIRNGFTLQDLWAIHVDV" gene complement(<646118..>648913) /locus_tag="CRE_04781" /db_xref="WormBase:WBGene00055721" mRNA complement(join(<646118..646282,646326..646939, 646984..647350,647398..647706,647749..647901, 647946..648081,648126..648580,648625..648744, 648800..>648913)) /locus_tag="CRE_04781" /product="hypothetical protein" /db_xref="WormBase:CRE04781" /db_xref="WormBase:WBGene00055721" CDS complement(join(646118..646282,646326..646939, 646984..647350,647398..647706,647749..647901, 647946..648081,648126..648580,648625..648744, 648800..648913)) /locus_tag="CRE_04781" /note="contains similarity to Brugia malayi Protein R01H10.7, putative.; TR:A8Q8U9" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86816.1" /db_xref="WormBase:CRE04781" /db_xref="WormBase:WBGene00055721" /translation="MDEDNAIEIFKAFTKQNIEYDLEDTATVCYKSKTYSAKVLLHGN VLCVSESSGTEAVTACVPLIFLLEQVVIVKAEENPEVPPTFSFVVTFSEPAENIQITL ESEEKREHWMVKVSHSFFSKIIIFFVYVQLATCSHQMARAELDEVAYKFYTMSPSASS ETDSVIDPKTSSFQNFYQSAPLRVTHSFAITQQNNLPPRRVIVEESMCESKLSLIVPK EIIKLNRKKISEFSGLLESRLKVWPQVSISWLHEVIRQLREMSETYEQCFEFVDHYSG PSFRKSVEKHRVAFGLVPTNLHIHSYEINSNDRRDFITAGTASAIPHRYHNGGLVKLY TQLDVEPYNFDYTFWNKRQVILELKKTIGELSHKIEKEWKIAKFGSPDKICLQVHAGI KQVYEGLKDVLSSLPDIERCSDILLEEEKKREASGRTMPETRVYDNIQNQIDRIDAMI VSLNTKIAVIDTLNEAPHEREACEKNTRQAVSTCLDILLVLADSILESQLFSLVKSLQ KPSVAQSYLHIMIRTDFVLSQAVTIATTAILNRIQKKDVPFTNDFLLIVFSFLSAYGD ERGMIEDAVEAWKCLEQRVRFRLVRAPSAVCRTCIPMVQGTRSSLKVSIPLPHEYFDA LPDNFKWTSEFTVVTSYFNIGVNHEATLGQSFGGIAVESSVNQDAAEKLNMFANRNEA SQRAREAVMEVVNEVSTEPSRKNLSIFEWAMMASEQLGAEAVISCKSGKDRTGMASTL EQGRVLRETCGFNTTQISEIVNSLRKDGVRRENCRKNVGKPVYSFSPFQMHFLPKAFR PPSGTYSKGVAS" gene <649377..>652627 /gene="Cre-cnk-1" /locus_tag="CRE_04582" /db_xref="WormBase:WBGene00055722" mRNA join(<649377..649458,649671..649787,649832..649995, 650043..650381,650427..650546,650594..650985, 651037..651329,651379..651574,651693..652094, 652156..652224,652271..652344,652470..>652627) /gene="Cre-cnk-1" /locus_tag="CRE_04582" /product="CRE-CNK-1 protein" /db_xref="WormBase:WBGene00055722" CDS join(649377..649458,649671..649787,649832..649995, 650043..650381,650427..650546,650594..650985, 651037..651329,651379..651574,651693..652094, 652156..652224,652271..652344,652470..652627) /gene="Cre-cnk-1" /locus_tag="CRE_04582" /note="contains similarity to Pfam domains PF00169 (PH domain), PF00595 (PDZ domain (Also known as DHR or GLGF)), PF07647 (SAM domain (Sterile alpha motif)); contains similarity to Interpro domains IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type), IPR001660 (Sterile alpha motif SAM), IPR001478 (PDZ/DHR/GLGF), IPR011510 (Sterile alpha motif homology 2); coded for by the following C. remanei cDNAs: DT933456" /codon_start=1 /product="CRE-CNK-1 protein" /protein_id="EFO86823.1" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001660" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR011510" /db_xref="InterPro:IPR011993" /db_xref="PFAM:PF00169" /db_xref="PFAM:PF00595" /db_xref="PFAM:PF07647" /db_xref="WormBase:CRE04582" /db_xref="WormBase:WBGene00055722" /translation="MFSTTMGFPSTPLEAKQALGISSAINAVSAGLRAGSPMLSASYE PQFSFARCIEQWKGKEITRWIEGLGDQMHPYLGLIRENIKCGKQLEALDDDSLKKMGI SALGARKTILQAVTLLLYFCYESEQENLQRLAQQVKTSCYYVERTMTAAMRMREKAIR RSEIVNILNSVSNAVLQLAEHTKRLVFWLDRTPFDEEEEFKAVRNSISSFMWNLLRNV NVQPKALFETGSQIVRMSKELAYESQKIVDCEDPIVLYACFVETAQLRRRSGTINWGL NIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTCVGWDLTSVVQRIGDADV TELSLVIKRRPREPQLPKQSKLAARALAPSSQAAKTYSTDDYDPFGQSEPLKRHRSCH VISEIIKENERRIRTSRRLARRSSIASACPRKERRNMEEPSLDEDEDDWDVHGYIRDV DGEEEALVPRIAKRTRTMRHQPDGYVRSFIDNKLVTDIEDDVVNDQLTFNVKCPSEFA QIKEVDKEELKILNLPEAKVSDEEWRAPYQEFSGPSFRAVGDSNLSAFSLDSPRLLPV SSRMNSSVDDSIFGVLPSPSTSSMNSVSSPAPFGKFQMSISQTEWSPNPDDLPGSPLT AAYSSMDKLFEGWVRRRKTRAELSANELTNKWPKIWMCLRGHYLLLYSNQNTKRPEMT INLIKATISDSTDLKTSKKNIFRITSPPLDYHFSCFTSLDWKNWIQKMKMSKEIYSTA ANQSRIMSQSVSSYNNDLSDQNFFLGQHQMSTSHHGELSTLPRIQNGMSSSKSGSSGF KSK" gene <653168..>654648 /gene="Cre-pad-2" /locus_tag="CRE_04583" /db_xref="WormBase:WBGene00055723" mRNA join(<653168..653721,653765..654007,654046..654400, 654475..>654648) /gene="Cre-pad-2" /locus_tag="CRE_04583" /product="CRE-PAD-2 protein" /db_xref="WormBase:WBGene00055723" CDS join(653168..653721,653765..654007,654046..654400, 654475..654648) /gene="Cre-pad-2" /locus_tag="CRE_04583" /note="contains similarity to Ciona savignyi Protein O-fucosyltransferase 2.; TR:Q00P38" /codon_start=1 /product="CRE-PAD-2 protein" /protein_id="EFO86608.1" /db_xref="WormBase:CRE04583" /db_xref="WormBase:WBGene00055723" /translation="MHFSFLLLVLGTVLADVDDSSHNTVSRVDTNKYSVATEKKFLLY DVNFGEGFNLRRDVYMRLANAVRLLRESGDNWILVLPPWGRLHHWQRMEVALSWRLFF DLESLNRFVPVIEFEDFLDGTDIYCIVLEDSCFSETENKPIDQVVYLQHYEEGWGTEY VRKFDERKCLPPANSHYKQEGDSDWRGWFYSYEDVRATNFKCVSIQGDSGTLRDLLKQ SNFSEMSSVMIDRAETILHENFGDVNYWKARRSMRYSKELIEIADTFSFRDKYLDSDD ENDDTGMTTDWRKERSKRSAKGGPYIGIHWRRRDFLYARKEQLPSIKGTADILENLSE KLKLNKIYLATDAPEEEINELKYYLREELEVFRFTDSQKFNDGQIAIIDQYLCAHARH FIGSHESTFSFRIQEDREIIGFPISSTFNRLCPDNNLECEQPSKWKIVF" gene <660043..>661445 /locus_tag="CRE_04584" /db_xref="WormBase:WBGene00055724" mRNA join(<660043..660063,660346..660737,660785..660864, 660909..661001,661360..>661445) /locus_tag="CRE_04584" /product="hypothetical protein" /db_xref="WormBase:CRE04584" /db_xref="WormBase:WBGene00055724" CDS join(660043..660063,660346..660737,660785..660864, 660909..661001,661360..661445) /locus_tag="CRE_04584" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86898.1" /db_xref="WormBase:CRE04584" /db_xref="WormBase:WBGene00055724" /translation="MRCNDLKRAVEDVVLRPDENRLQDLHHRDTIAALDLCQLESSST SATRPDEITASTMNACSCSSEIVGIQTSSTVMADSSRPPPPLCASSSLDAIMFRQQPI PSHRHSASGSRRQSRVYSNLHSKRKRSNSLTNYNKGQSLSVSLPPSARHTPHRFPNEE DAFRNSIVSSDSHSSVARSDEYNNGYVLEEEESSVDKEFVEHVVQSDNKDTVFSSRPY EFIVV" gene complement(<661588..>662708) /locus_tag="CRE_04782" /db_xref="WormBase:WBGene00078738" mRNA complement(join(<661588..661869,662682..>662708)) /locus_tag="CRE_04782" /product="hypothetical protein" /db_xref="WormBase:CRE04782" /db_xref="WormBase:WBGene00078738" CDS complement(join(661588..661869,662682..662708)) /locus_tag="CRE_04782" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86671.1" /db_xref="WormBase:CRE04782" /db_xref="WormBase:WBGene00078738" /translation="MPSQKELVETGKVRAVEVKIGQKVFQKSVNHLIPLEIPAEERQD QDAPAAGTPSDLHKQITPAKAPPQRTRPYLPRRAKENKVTIGHDQQLGSPSNQPLASA " gap 661911..661920 /estimated_length=10 gene <665153..>668315 /locus_tag="CRE_04585" /db_xref="WormBase:WBGene00073217" mRNA join(<665153..665349,665397..665401,665525..665690, 665738..665840,666267..666340,666388..666481, 666835..667070,667118..667214,667267..667362, 667460..667789,668133..>668315) /locus_tag="CRE_04585" /product="hypothetical protein" /db_xref="WormBase:CRE04585" /db_xref="WormBase:WBGene00073217" CDS join(665153..665349,665397..665401,665525..665690, 665738..665840,666267..666340,666388..666481, 666835..667070,667118..667214,667267..667362, 667460..667789,668133..668315) /locus_tag="CRE_04585" /note="contains similarity to Pfam domains PF01138 (3' exoribonuclease family, domain 1), PF01753 (MYND finger), PF04045 (Arp2/3 complex, 34 kD subunit p34-Arc); contains similarity to Interpro domains IPR002893 (Zinc finger, MYND-type), IPR007188 (Arp2/3 complex, 34kDa subunit p34-Arc), IPR001247 (Exoribonuclease, phosphorolytic domain 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86730.1" /db_xref="InterPro:IPR001247" /db_xref="InterPro:IPR002893" /db_xref="InterPro:IPR007188" /db_xref="PFAM:PF01138" /db_xref="PFAM:PF01753" /db_xref="PFAM:PF04045" /db_xref="WormBase:CRE04585" /db_xref="WormBase:WBGene00073217" /translation="MPTIRSNLSIPLTHLNRIDDVRMETDDVEKRSETTFRPLCVKCG VFGAQDGSGYAEFGNTRVLAQITVIFVNKYPGKVIDIEVTVLSDDGGVLSTAITAVTL ALAHSGIEHMGLTASAHVALKSNGDYITDPSTSEAEDAIGGVTFAFVPNLGQTTCMII LEQNNRIIIELLEQKFANAKEGAKPESVNVTFADFDGVLYKVSNPDGVKTRIILLRRV YGGHMRATPESGFNVTLEYDLSALPDNTSELVQKASALKRNCFASVFEKYFEFQEAGQ EGHKRAVINYREDETMYIEAKADRVTVIFCTVFKDAKFSKTLIFSRQKQQGAPQQADM NLSPIEKELDSSLAEQGHHDGNYHLDGVHVSEGMKRMIIDLQRHWLNEYHTSREKCLV ELTEKLHQEFMQDQQKIRADLLQQFKEELEQTRIDLDNKHRENLKMESAKLIEKHKRE LLAAKKKQWCWSCENEAIYHCCWNTAYCSVECQQGHWQTHRKFCRRKKGNNAGGQGAP GANAAQQAIAQQAAQQQQ" gap 668953..668962 /estimated_length=10 gene complement(<669713..>671049) /locus_tag="CRE_04783" /db_xref="WormBase:WBGene00073216" mRNA complement(join(<669713..670189,670220..670302, 670965..>671049)) /locus_tag="CRE_04783" /product="hypothetical protein" /db_xref="WormBase:CRE04783" /db_xref="WormBase:WBGene00073216" CDS complement(join(669713..670189,670220..670302, 670965..671049)) /locus_tag="CRE_04783" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86618.1" /db_xref="WormBase:CRE04783" /db_xref="WormBase:WBGene00073216" /translation="MQKPPSPSPSSKVPQLTSIDAEPKGASRGINSDTPASSIQDASS LVSPGRLPLHGRKRHRFWSGCLFCSQRGHAAAYCEKFDVESRWAAVERRKWCSICLMS GHLFDNCRAKTRKNACRFCSGMHHPALCRDKWGPQDNVIAPKKPREEANDEKPDDPME EGVDEENHPKTGNPKTEENDVSDMDSEESDARKPRTYGIYDVHIDLDGSEDDDQ" gene complement(<672115..>673462) /locus_tag="CRE_04784" /db_xref="WormBase:WBGene00078723" mRNA complement(join(<672115..672285,672332..672428, 672471..672574,672798..672956,673007..>673462)) /locus_tag="CRE_04784" /product="hypothetical protein" /db_xref="WormBase:CRE04784" /db_xref="WormBase:WBGene00078723" CDS complement(join(672115..672285,672332..672428, 672471..672574,672798..672956,673007..673462)) /locus_tag="CRE_04784" /note="contains similarity to Pfam domain PF10322 Serpentine type 7TM GPCR chemoreceptor Sru; contains similarity to Interpro domain IPR003839 (7TM GPCR, serpentine receptor class u (Sru), Nematode)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86534.1" /db_xref="InterPro:IPR003839" /db_xref="PFAM:PF10322" /db_xref="WormBase:CRE04784" /db_xref="WormBase:WBGene00078723" /translation="MASPTEHPPNAYLPIDTYPDYQNFSYHFDYVSIITVATFICFIP TVITTTNMIIFYQKNLSRNFSKEIHPYVFKSFLYMQSSNIIYTTLDFFLVRIPSTSLV TSYFYSMKPDSIIRYVVAAFYGYEYLSQLFTVLFCFIRVLVLFNPRKRLEMYDFIFMI WLFLSLVLSFVASFPHIKHNSMGMQLDVPFQYGAMFLTTTFAYGNSIQTIGNGIFSII VTIAIVVMTSLMVSKLKTLKLMNNSSNRKRKAEKTLTITMFIILIPAIFTQVLAISSL FATSFSCYIILARPIVLDCRVTIVSCYFFLTHPYFKKKFVSQTITIRPLSNC" gene complement(<674044..>675403) /locus_tag="CRE_04785" /db_xref="WormBase:WBGene00055725" mRNA complement(join(<674044..674214,674263..674359, 674408..674511,674685..674843,674891..>675403)) /locus_tag="CRE_04785" /product="hypothetical protein" /db_xref="WormBase:CRE04785" /db_xref="WormBase:WBGene00055725" CDS complement(join(674044..674214,674263..674359, 674408..674511,674685..674843,674891..675403)) /locus_tag="CRE_04785" /note="contains similarity to Pfam domain PF02688 Domain of unknown function DUF215; contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86913.1" /db_xref="InterPro:IPR003839" /db_xref="PFAM:PF02688" /db_xref="WormBase:CRE04785" /db_xref="WormBase:WBGene00055725" /translation="MRNEPNHFTENSKISLFEMASLPEQPRNAYLPISSFPEYQKFSY QFVDYVTIIILLAFICLVPSIYSTLSMMIFHQRNLSRNFSKEIHQYVFKSFVCMQSCN IISTILDFVIIRIPCTSLVTSYFSTMKLDSLMRFVIAACYGFEYLAQLFTILFCFIRV LVLYHPRKHLEICSDIFIVWSILSVAISCVGCSPHAINGAMGMQLSSPFQYGAMVLTS TFAYGNPLHIIGNSIFSFIVTICIIVMTLMMVLKMKRLKLINQNSKRKAKAETTLAIT MCIILIPSVLSQIMTITCLGDAKYACYIILIRPILLDCRVNIVSCYFYWTHPYFKNNS SLKSVNVKSVSSI" gene <683280..>685915 /gene="Cre-vglu-3" /locus_tag="CRE_04586" /db_xref="WormBase:WBGene00055726" mRNA join(<683280..683393,683439..683591,683679..684233, 684280..684840,685246..685341,685390..685447, 685619..685682,685747..>685915) /gene="Cre-vglu-3" /locus_tag="CRE_04586" /product="CRE-VGLU-3 protein" /db_xref="WormBase:WBGene00055726" CDS join(683280..683393,683439..683591,683679..684233, 684280..684840,685246..685341,685390..685447, 685619..685682,685747..685915) /gene="Cre-vglu-3" /locus_tag="CRE_04586" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily; contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1); coded for by the following C. remanei cDNAs: DR779689" /codon_start=1 /product="CRE-VGLU-3 protein" /protein_id="EFO86637.1" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="PFAM:PF07690" /db_xref="WormBase:CRE04586" /db_xref="WormBase:WBGene00055726" /translation="MASKTLKKSASAISDTLRRTFSSKTWEHREQLHTLTEDNKFFLR KVRWQIALLAHLGFAISFGIRSNFGVAKNRMVNNFTDAYGEVHVREKEFFWTGTEVGM MESSFFYGYAASQIPAGVLASKFAPNKLFMLGILIASLLNILTAVSLKFHPFTDIFVM VIQTMQGLALGVCYPAMHGVWKFWAPPLERSKLATTTFTGASVGVMIGLPASAYLVSH FHWSAPFYVFGVLGIIWSLAWMYVAGSSPTTHNYISEDEKKFITEKVGSVAVKNMTLT TLPWRDMMTSTAVWAIIICSFCRSWSFFLLLGNQLTYMKDVLHIDIKNVSFIMPRNSN QFSFQSGIIAIFPQLGMCIVTLTSGQLSDYLRSSGKMSTEAVRKSVNTFGFTVEAVML GSLAFIRDPVIAVTCLIIACSGAGAVLSAFNVNHFDIAPRYAPILMGIANGLGAIAGV GGIVTNSMTFENPEGWKWVFLLAMSIDICGIIFFLVFAKGDVLPWAREPEKEETFNEF VRRMSTMVRSLSRRTRSRSTDTNYAKMEEERVNSSEMKACNKTETPTEEGVLNETKAV GGNLEVVPEEPSQKNLKTDRPEV" gene complement(<686250..>689162) /locus_tag="CRE_04786" /db_xref="WormBase:WBGene00055727" mRNA complement(join(<686250..686381,686430..686539, 686586..686709,686760..686899,686947..687058, 687302..687421,687472..687603,689022..>689162)) /locus_tag="CRE_04786" /product="hypothetical protein" /db_xref="WormBase:CRE04786" /db_xref="WormBase:WBGene00055727" CDS complement(join(686250..686381,686430..686539, 686586..686709,686760..686899,686947..687058, 687302..687421,687472..687603,689022..689162)) /locus_tag="CRE_04786" /note="contains similarity to Pfam domain PF06828 Fukutin-related; contains similarity to Interpro domain IPR009644 (Fukutin-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86660.1" /db_xref="InterPro:IPR009644" /db_xref="PFAM:PF06828" /db_xref="WormBase:CRE04786" /db_xref="WormBase:WBGene00055727" /translation="MIRNVLTIGAATMFTVYLFSSAFYSVYNCIFSKDNYDVFIVSLD LKGVTSTPCISFLESLSVSFPVLLIDIHVLQSLHEEKCEKLSTQRIKVAIDKTFRNNT DSNESRFQFFGMENHANKDYFQFKTQPIRTHHIIENGKEAAGKLAEFRDIMLQFNMFP FLNGGTLLGWYRECGIIPHTTDMDIAVFAKDFHSDLVKFLQSRSSPFQLVRKIGLLND SFELTVTTKTGYKVNTDLFLMYEAVDGNGNVRNWVGGASYTLKYKYIYPKYDPWCAAD LYGYLFWVTCSPQKMLIFEYGNLWYEDLPSSQYNWKNSANNVQRNGEWREEELEQVYV MY" gene complement(<689519..>691714) /locus_tag="CRE_04787" /db_xref="WormBase:WBGene00055728" mRNA complement(join(<689519..689650,689699..689845, 689889..689948,690000..690418,690471..690542, 690989..691045,691166..691285,691430..691601, 691649..>691714)) /locus_tag="CRE_04787" /product="hypothetical protein" /db_xref="WormBase:CRE04787" /db_xref="WormBase:WBGene00055728" CDS complement(join(689519..689650,689699..689845, 689889..689948,690000..690418,690471..690542, 690989..691045,691166..691285,691430..691601, 691649..691714)) /locus_tag="CRE_04787" /note="contains similarity to Saccharomyces cerevisiae Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis; SGD:YGR159C" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86692.1" /db_xref="WormBase:CRE04787" /db_xref="WormBase:WBGene00055728" /translation="MSNNQNDWDDIMDVLVDNVGYLTETDRAIPEDDVVVITHSAYPT IPILRTEDSDMRSWMQNNQIQMPDQYLQSSEKLKRNLFEMRRRSQTASEESRRQSSRT SEGNDVPSTEYHYMYQDISIRMGEMSMMPPFPEESEGSTSPSSTESDDSGSDWNPGPS SIDTTRNASESPLLPEIDREPRRLSKTQKGKMTDEELEKRRKEANKKNSKNYNKNKKS KEISLNQEYEEKKACLKRMKDEDKEMKNLLLECYTYTGTVVRVSEEDGIPTLMDEETF INGIKSIDSEFLKIKSQDANFRKLAEVYQMKKKKHTDAENDKKLKKANTNTYGSRKSR ALHSMRIAHFELKLAELQFEMTKYSDRTNLMKMVKKQMASIFNFRYARAEEYISLPRS RKERFDQLCNILKADSPRTSRT" gene complement(<693539..>694770) /gene="Cre-unc-50" /locus_tag="CRE_04788" /db_xref="WormBase:WBGene00055729" mRNA complement(join(<693539..693810,694040..694360, 694407..694585,694631..>694770)) /gene="Cre-unc-50" /locus_tag="CRE_04788" /product="CRE-UNC-50 protein" /db_xref="WormBase:WBGene00055729" CDS complement(join(693539..693810,694040..694360, 694407..694585,694631..694770)) /gene="Cre-unc-50" /locus_tag="CRE_04788" /note="contains similarity to Pfam domain PF05216 UNC-50 family; contains similarity to Interpro domain IPR007881 (UNC-50); coded for by the following C. remanei cDNAs: DT935848, DR406920, DY529583" /codon_start=1 /product="CRE-UNC-50 protein" /protein_id="EFO86774.1" /db_xref="InterPro:IPR007881" /db_xref="PFAM:PF05216" /db_xref="WormBase:CRE04788" /db_xref="WormBase:WBGene00055729" /translation="MSSQPRGSQPGPSFSPVTSPISQRNFRYEPARSGYTSPGQYSTY STSTADRVGCLTAVRMSAFAKLSRFTRRLVHIRQMDFEFALWQMLYLLIQPSKVYKNF IYRKRTKDQFARDDPAFLVLLSLSLLFSSIFYAYALGLSKTGFFTFFLWSVFVDCIAV GVVIATILWWVSNRFLRKVRDQDVEWGYCFDVHLNAFFPMLILLHVIVPILYPTLIDS PSFLSVFLGNTFWFLAACYYVYITFLGYTALPILHKTQYFLYPISFIFMFFVATLTAG WNISRTALYFYHSRAEPHKFAPQHNSL" gene <695426..>695858 /gene="Cre-unc-69" /locus_tag="CRE_04587" /db_xref="WormBase:WBGene00055730" mRNA join(<695426..695471,695532..695669,695716..>695858) /gene="Cre-unc-69" /locus_tag="CRE_04587" /product="CRE-UNC-69 protein" /db_xref="WormBase:WBGene00055730" CDS join(695426..695471,695532..695669,695716..695858) /gene="Cre-unc-69" /locus_tag="CRE_04587" /note="contains similarity to Brugia malayi Short coiled-coil protein, putative.; TR:A8NJZ7" /codon_start=1 /product="CRE-UNC-69 protein" /protein_id="EFO86763.1" /db_xref="WormBase:CRE04587" /db_xref="WormBase:WBGene00055730" /translation="MSQKTEQDDIPLADDDDTVTIISGGKTPRAAQPLPKEEPPEDPE EKARLITQVLELQNTLDDLSQRVESVKEESLKLRSENQVLGQYIQNLMASSSVFQSSQ PPRPKQ" gene <696857..>700460 /locus_tag="CRE_04588" /db_xref="WormBase:WBGene00055731" mRNA join(<696857..696925,696977..697567,697628..697768, 697820..698398,698441..698632,698678..699751, 699796..699935,699985..700327,700374..>700460) /locus_tag="CRE_04588" /product="hypothetical protein" /db_xref="WormBase:CRE04588" /db_xref="WormBase:WBGene00055731" CDS join(696857..696925,696977..697567,697628..697768, 697820..698398,698441..698632,698678..699751, 699796..699935,699985..700327,700374..700460) /locus_tag="CRE_04588" /note="contains similarity to Trichomonas vaginalis G3 Viral A-type inclusion protein, putative.; TR:A2E8Z5" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86876.1" /db_xref="WormBase:CRE04588" /db_xref="WormBase:WBGene00055731" /translation="MNVSEVPTTDSGYPTPRDDLPSSSRSASPRSSPDEHQLTSTPVR GRRNMPMKEHFSHFRHDLSIIESTGSDSISTASDSNVVIGIVPQHYYRISFPLDSVKS LLAVSKELKKKSRENTVLRGENETLRGENESLREENCSLRETSRRTEMDKSISPEMGY EGVVFPVIPRLQLHDASKENDTNTATEHPMSSDDIKKELLSIIKSEEDRTILESKMEN VRMVISDSKPSAKVFTGTATIQLNTEKIDADVQTENDDHVKIVNANLQIEVDQLHSEI EIIGKRKSDLENRLFDYEKIKAKFEEDEQKLRSDLEKKLKTSQAQIARSEAKNEELQA RLNSKKKEVEEISAENRRLLEDKNTHEFEMDEMKVHEEHLMKQNSDLEVKLDETAKKV NDLEDALKEEKFRMIQFEKEAENTAKDFELSISGLKKKADEALEKETEAMKKLEEIRK QNKELVKENKYLSDSQHVLLDSEINSKNEINVLQANIRNIEAQLSVAKDQIAEEKRHK ELLNEDVTRLEIQNQKLIEDKYDSNELMDELKKGKLEIDHLRQQVQLLSQESNDVAQL KEELQSRTGVEQRLREKLEQALRKEGESDVKIEGYIRSEAAATAELERLKVELAEQTS VFVAAQQELTQKEATILELERAFEALRIEFEEFKADANAQYENEIFVREQELNHLRAR LIELETYPGHTISVSRQSKEVQTDDIVLEETTISPSHVVEEQVLSPVVSPVSEELIPR HLIRLDEKLNRLIEKLKQVRTVETIGDTSADNQLSPLYQSSETVKQIVEILESVLLDS QEKDNQSSNYIDNFWASLNKRAEHLVQIMEEKFETAHREYGRNVQKIDQKWKMQNEKL RMELDKANALSEQRVYLATQFREQYEMEEKMKDEALAEIERLVGMRDEELAEWENNEK DLRKRLERAEHAIQVNARDKLNRTEEFEAELEHLTTRLQKSEVDHNRKVKELEKQIHE EKGKRAFERESLKRMHISFDNTLEQCGYLRKRNTSRQKLLNHMHAFLHGINLGNCDES MRKRNELIHRVENSGLLKLNRDEIDDERIDRRILGEPNRSQ" gene <701545..>702545 /locus_tag="CRE_04589" /db_xref="WormBase:WBGene00055732" mRNA join(<701545..701573,701617..701705,701769..702159, 702212..702298,702368..>702545) /locus_tag="CRE_04589" /product="hypothetical protein" /db_xref="WormBase:CRE04589" /db_xref="WormBase:WBGene00055732" CDS join(701545..701573,701617..701705,701769..702159, 702212..702298,702368..702545) /locus_tag="CRE_04589" /note="contains similarity to Pfam domain PF04370 Domain of unknown function (DUF508); contains similarity to Interpro domain IPR007465 (Protein of unknown function DUF508)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86889.1" /db_xref="InterPro:IPR007465" /db_xref="PFAM:PF04370" /db_xref="WormBase:CRE04589" /db_xref="WormBase:WBGene00055732" /translation="MTSEVVHFTGQEQLPPVLKLIADSRYQFSTHKYAIEKSEGGAHH IYIVTMSYEPLIKEVMTTARSSSNIKEQALVSQIKSLTTSEKKKKKKNKSPVVHQMKI LKDSTHPNQYFMLPDASSAASSIATSSDSFSFSSISARTGSNAKSTGKAVTMVHVKFI LLYRDVCKRRVQSNFADEFSSDTLLQDVVINFQQLCSRQLRGQEFHPRLAYCIGEVSE KNSKPVLDSDLGKSLAQLASTNSIIQFSLIADNVKYGGE" gene complement(<703203..>706533) /gene="Cre-nex-2" /locus_tag="CRE_04789" /db_xref="WormBase:WBGene00055733" mRNA complement(join(<703203..703393,703444..703774, 703822..704267,705202..705603,705658..705775, 706489..>706533)) /gene="Cre-nex-2" /locus_tag="CRE_04789" /product="CRE-NEX-2 protein" /db_xref="WormBase:WBGene00055733" CDS complement(join(703203..703393,703444..703774, 703822..704267,705202..705603,705658..705775, 706489..706533)) /gene="Cre-nex-2" /locus_tag="CRE_04789" /note="contains similarity to Pfam domain PF00191 Annexin; contains similarity to Interpro domain IPR001464 (Annexin); coded for by the following C. remanei cDNAs: DT933907, DR775974, DR779205, DT937025, DT936900" /codon_start=1 /product="CRE-NEX-2 protein" /protein_id="EFO86561.1" /db_xref="InterPro:IPR001464" /db_xref="PFAM:PF00191" /db_xref="WormBase:CRE04789" /db_xref="WormBase:WBGene00055733" /translation="MSLRKFVMSGIQDVLDNKLGGLSGNKQPNNGQQRDNSSSSSSNQ PQQDYNMNPGGYPNQPSYGNAGYGGMPPQQPGYGNGGYDPYGQGQNHQQQQPYPGGGG GQPPYPGGYPNQGQGAPYPGGGGGAGYPQPPQYGFSGGPQSGGYPPQQPYQQQHQQPS YPPQQNFQQGGGPQMGGGFFPNHGYGQPVMIGTPSLFPIPGFNANADAEVLRKAMKGL GCNNSKVISVLCQRTNGQRQEISKAFKVMYGKDLIKELKGELHGDFEDLILALMEAPA IYDAKQLYKAMDGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLYKKDLERDLIGETSG HFKRLLVSLCAGGRDESNQTDALRANQDARRLYQAGEKRLGTDESTFNAILASQNFNQ LRMVFEEYQKVSNHSIEKAIESEFSGDVRDGLLAVIAVVRNRPAYFAKLLHDSMKGLG TRDNDLIRLCVTRAEYDMADIRNMFQSLYRTTLENMIKGDCSGAYKEGLIALVNGNRG TM" gene complement(<707233..>707649) /locus_tag="CRE_04790" /db_xref="WormBase:WBGene00055734" mRNA complement(join(<707233..707316,707362..707544, 707599..>707649)) /locus_tag="CRE_04790" /product="hypothetical protein" /db_xref="WormBase:CRE04790" /db_xref="WormBase:WBGene00055734" CDS complement(join(707233..707316,707362..707544, 707599..707649)) /locus_tag="CRE_04790" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86650.1" /db_xref="WormBase:CRE04790" /db_xref="WormBase:WBGene00055734" /translation="MGLVISLVAPTVHMNDNISSRILLGPDKPENNPSSPENISKYDN ISYPVSTELGPSPGNKPPLNPVVGVPTILPPSDTTSKAQNNSVYDTLKMTPEVDWNKK KTQ" gene complement(<707936..>709837) /locus_tag="CRE_04791" /db_xref="WormBase:WBGene00055735" mRNA complement(join(<707936..708093,708139..708297, 708347..708633,708683..708957,709001..709250, 709302..709439,709484..709604,709654..>709837)) /locus_tag="CRE_04791" /product="hypothetical protein" /db_xref="WormBase:CRE04791" /db_xref="WormBase:WBGene00055735" CDS complement(join(707936..708093,708139..708297, 708347..708633,708683..708957,709001..709250, 709302..709439,709484..709604,709654..709837)) /locus_tag="CRE_04791" /note="contains similarity to Pfam domain PF02373 JmjC domain; contains similarity to Interpro domains IPR013129 (Transcription factor jumonji), IPR003347 (Transcription factor jumonji/aspartyl beta-hydroxylase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86701.1" /db_xref="InterPro:IPR003347" /db_xref="InterPro:IPR013129" /db_xref="PFAM:PF02373" /db_xref="WormBase:CRE04791" /db_xref="WormBase:WBGene00055735" /translation="MTFEIPRIEDEFTPWLNILVEHGFKNKPFILGETFSSSWLARKE WVLPDGQPNKEYLKQAYGNSLVPILMNGSDYKSTTLTEFLENMGDPKVYLKDWHFQNQ FGTSVYKLHPFFSRDFVNCEKWTTEKSKNPFGDDYRFVYIGAAESWTKFHADVVSSYS WSANICGRKKWFMMPPGNEHFFKCNFSESGFVEDIRDFPNLFEQAEVVTFIQEPGEIV FVPSNWYHQVHNLADTISINHNWMNSTNLHIVHKFLNQRKHDVKHELRDCLDSFQKNE FDEKVEELLFIDARLNISKFLQLCELVKESRSKSQHEYLCKVHSSDIWQCMLSPDCYS SISSICSCSTSFCSKCSSFIEQLEFSTVSHYLGESCRNHNVPIEYLQMFTEDQLSKLY DCATTSERLPNEFADGEKDFKKLIQYGEYFKACQSSYSTDYIQKAADLNEEEKVQLKN IVTQKLVEASGKDDINWNVNIVIGNSHVAKSLRPIITIKMPTNEGETFEFDIDSFAQF RQQLASAVLAVNPQE" gene <710208..>711122 /gene="Cre-mev-1" /locus_tag="CRE_04590" /db_xref="WormBase:WBGene00055736" mRNA join(<710208..710294,710565..710834,710882..710974, 711018..>711122) /gene="Cre-mev-1" /locus_tag="CRE_04590" /product="CRE-MEV-1 protein" /db_xref="WormBase:WBGene00055736" CDS join(710208..710294,710565..710834,710882..710974, 711018..711122) /gene="Cre-mev-1" /locus_tag="CRE_04590" /note="contains similarity to Pfam domain PF01127 Succinate dehydrogenase cytochrome b subunit; contains similarity to Interpro domains IPR014361 (Succinate dehydrogenase, cytochrome b560 subunit), IPR000701 (Succinate dehydrogenase, cytochrome b subunit), IPR014314 (Succinate dehydrogenase, cytochrome b556 subunit); coded for by the following C. remanei cDNAs: DY529352, DT934149, DT933684, DR780928, DR409766, DT936049, DT936143, DR780475" /codon_start=1 /product="CRE-MEV-1 protein" /protein_id="EFO86826.1" /db_xref="InterPro:IPR000701" /db_xref="InterPro:IPR014314" /db_xref="InterPro:IPR014361" /db_xref="PFAM:PF01127" /db_xref="WormBase:CRE04590" /db_xref="WormBase:WBGene00055736" /translation="MINIPTSILCRLGARSSISRSFGTSVVTKSEAKTPIQKFGWEYL MKQRAKNRPIAPHLTIYQPQLTWMLSGFHRISGCVMAGTLLVGGIGFAVLPFDFTTFV EYIRGWNLPCAVTAVFKYIIAFPIIFHTLNGIRFLGFDLAKGVDNIGQVYKSGWLVFG VSAVIALAIVINSCQNKNKAVKTA" gene <711332..>712505 /gene="Cre-ced-9" /locus_tag="CRE_04591" /db_xref="WormBase:WBGene00055737" mRNA join(<711332..711901,711994..712143,712356..>712505) /gene="Cre-ced-9" /locus_tag="CRE_04591" /product="CRE-CED-9 protein" /db_xref="WormBase:WBGene00055737" CDS join(711332..711901,711994..712143,712356..712505) /gene="Cre-ced-9" /locus_tag="CRE_04591" /note="contains similarity to Pfam domain PF00452 Apoptosis regulator proteins, Bcl-2 family; contains similarity to Interpro domains IPR000712 (Apoptosis regulator Bcl-2, BH), IPR003093 (Apoptosis regulator Bcl-2 protein, BH4), IPR002475 (BCL2-like apoptosis inhibitor)" /codon_start=1 /product="CRE-CED-9 protein" /protein_id="EFO86886.1" /db_xref="InterPro:IPR000712" /db_xref="InterPro:IPR002475" /db_xref="InterPro:IPR003093" /db_xref="PFAM:PF00452" /db_xref="WormBase:CRE04591" /db_xref="WormBase:WBGene00055737" /translation="MTMTRDGRFDSMDKAAPQFSFRRRTMATSEMKEFLSTKGVESTN LNLDDAPDQSPPSTSTRRMSFGETMPERIYDWEDPRLGIQGFVVRNLKKYFRIPKFLK ADYFTYRIEQSGLDWYDAPALPDGVQDEFKMMRSLATIFEKKHTEELENCSEQLLAVP KLTFHLYQEVAKFFDRSIGPGHCSMSYGHLIGLISFGGMVAAKMMGTAELQGQVRNLL LYTSLFIKTRIRQCWKEHDRSWAGFMALGKQMKEDFERDQAVQEGRLRNWSLIGAGVI AAIVCGRIVYSFK" gene <713167..>713615 /gene="Cre-ttr-15" /locus_tag="CRE_04592" /db_xref="WormBase:WBGene00055738" mRNA join(<713167..713311,713368..>713615) /gene="Cre-ttr-15" /locus_tag="CRE_04592" /product="CRE-TTR-15 protein" /db_xref="WormBase:WBGene00055738" CDS join(713167..713311,713368..713615) /gene="Cre-ttr-15" /locus_tag="CRE_04592" /note="contains similarity to Pfam domain PF01060 Transthyretin-like family; contains similarity to Interpro domain IPR001534 (Transthyretin-like); coded for by the following C. remanei cDNAs: DR775780" /codon_start=1 /product="CRE-TTR-15 protein" /protein_id="EFO86716.1" /db_xref="InterPro:IPR001534" /db_xref="PFAM:PF01060" /db_xref="WormBase:CRE04592" /db_xref="WormBase:WBGene00055738" /translation="MRALLFTSAVLLAIAFVEAKKQTITVKGTTICNKKRIQAEVTLW EKDTLDPDDKLATMTSSKEGEFSLTGSDDEITSINPYLIITHNCNVKKAGCKRVSEFV VPKEKIGGTYDMTYVTLDILSAKDKEKC" gene complement(<714162..>715396) /gene="Cre-tbx-9" /locus_tag="CRE_04792" /db_xref="WormBase:WBGene00055739" mRNA complement(join(<714162..714626,714677..714902, 714960..>715396)) /gene="Cre-tbx-9" /locus_tag="CRE_04792" /product="CRE-TBX-9 protein" /db_xref="WormBase:WBGene00055739" CDS complement(join(714162..714626,714677..714902, 714960..715396)) /gene="Cre-tbx-9" /locus_tag="CRE_04792" /note="contains similarity to Pfam domain PF00907 T-box; contains similarity to Interpro domain IPR001699 (Transcription factor, T-box)" /codon_start=1 /product="CRE-TBX-9 protein" /protein_id="EFO86790.1" /db_xref="InterPro:IPR001699" /db_xref="PFAM:PF00907" /db_xref="WormBase:CRE04792" /db_xref="WormBase:WBGene00055739" /translation="MCNGFALFFTCSSRDDIIRFSQSFFFLTFFILSISSNTLRIIHF RSKMFNQVTVSLVPSHDEKWMLFHSEVNEMIVTKTGRNFFPKLEYIVEGLDPSKLYAM MIQIEPVGDSRYKFSNGKWAVSGKGDVHAEAKKAWHADGVRSGKEWMETTVAFDRLKI SNDLQTRNAWMIPLHSMHKYVPVLTIYEAPSESPFVANSSNQCVASVRIPHTEFIAVT AYQNQKVTELKIKFNDYAKGFRKEKQNRKRRSPSDFDYSTDSTESTSKSSSPQPKYSR ASSSSPPEFDLPSPSQPINPFIFSLPPFSQMVSGNMSSLPFFPFGMPPFSTTPTPSSP KSSPRSSSSPEISIPSDSSEKKLTVIKEEPEESEEDIDVLN" gene complement(<719887..>721100) /gene="Cre-tbx-8" /locus_tag="CRE_04793" /db_xref="WormBase:WBGene00055740" mRNA complement(join(<719887..720315,720456..720608, 720659..720734,720805..>721100)) /gene="Cre-tbx-8" /locus_tag="CRE_04793" /product="CRE-TBX-8 protein" /db_xref="WormBase:WBGene00055740" CDS complement(join(719887..720315,720456..720608, 720659..720734,720805..721100)) /gene="Cre-tbx-8" /locus_tag="CRE_04793" /note="contains similarity to Pfam domain PF00907 T-box; contains similarity to Interpro domain IPR001699 (Transcription factor, T-box)" /codon_start=1 /product="CRE-TBX-8 protein" /protein_id="EFO86686.1" /db_xref="InterPro:IPR001699" /db_xref="PFAM:PF00907" /db_xref="WormBase:CRE04793" /db_xref="WormBase:WBGene00055740" /translation="MSNQVQVSLKEEQDRLWRLFHSHRNEMIVTKSGRKMFPKLDYVI RGLNQNKLYAMMLHIEQSDDCRYKFSSGEWMKSGKAEQHKEPKKLWHPDGVRSGKDWM ANPICFDRVKITNSVDSSNASMIFLHSMHKYTPVLSVYESQSETPMGIPQPSTRLVTS VRLDYTEFIAVTAYQNDAVIKLKIQFNPFAKGFREGSQGDRKRSSPSADDSTTDESSS QVSSPQPKKSRTASVSPPLMPRLPPPIFPNSHFPTSTPINPFIYTLPYFTQFSTGVLP PNPFPFPLGFPCFSPLSFPPQPSVKVEEKDQEEIEPEINVV" gene <725001..>727754 /locus_tag="CRE_04593" /db_xref="WormBase:WBGene00055741" mRNA join(<725001..725017,725308..725419,725467..725624, 725675..725829,725874..726085,726138..726442, 726525..727068,727110..727253,727303..727650, 727695..>727754) /locus_tag="CRE_04593" /product="hypothetical protein" /db_xref="WormBase:CRE04593" /db_xref="WormBase:WBGene00055741" CDS join(725001..725017,725308..725419,725467..725624, 725675..725829,725874..726085,726138..726442, 726525..727068,727110..727253,727303..727650, 727695..727754) /locus_tag="CRE_04593" /note="contains similarity to Staphylococcus aureus Serine-rich adhesin for platelets precursor (Staphylococcus aureusssurface protein A).; SW:Q7A362; coded for by the following C. remanei cDNAs: DR777694" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86526.1" /db_xref="WormBase:CRE04593" /db_xref="WormBase:WBGene00055741" /translation="MTDSQSTQMARGRNAKRNKSTASVGSKKNRTQSTTSTKFQQSVD GFSAFIVSVSKLGKNGHEFTWHDLRKVYHKETQRQLTAEELNAIFSAKSLTKREIFEL PKVKRFMESMDGSMMCRFRLIGEPDGYQSENDDIPPLMSTSLESDVVTQNSTSPNFSQ AASPIMPNEKSIAISTDCDDKTGGPTSDLSKSDNSPSQRSLVQQSSMTDDEGWVSGRD TRSDNSSPVEIHTDKDEVDGGSKMELDDEVFEDEHRIEAGSDNVDGHLVTDVLVVEEA TVEQKYKEAENSYIAPIVMTESITAAFEAVIQSVHANATLPETQNSSATARVHATPRK VLSPPVPAERTTVSSDELSTGAPIKRLIEKFDTAVNFVEQKIKRDGSPSIYTQVLEEI KETEHSVDQEVLSTKTEEHEEAEVTNVIFRSTSTHSSIIANGKEQLAEFVAEQEAKHK EKPATPKITNANTTTEETENAFCAKEQSSMSSLDREYFDSKTKHNVDLFAELGVKDPD GFQLKTVDSCGSGPASSEIITVIETPSKVLDAMRKRTDSVESDADVPYSLCSEDEGEP MTMIEKSMKASQSAEQLSKPKEEVRAKTVVVNVELDGQAKRDSNDTNAVHVKDRVAAL QALVVDKSVPIAKIDSLDKEEVLVLSRNEELPHIALEAKPATGTIRRRHVRFMRGCCV VQ" gene complement(<728302..>728674) /gene="Cre-spp-1" /locus_tag="CRE_04794" /db_xref="WormBase:WBGene00055742" mRNA complement(join(<728302..728496,728543..>728674)) /gene="Cre-spp-1" /locus_tag="CRE_04794" /product="CRE-SPP-1 protein" /db_xref="WormBase:WBGene00055742" CDS complement(join(728302..728496,728543..728674)) /gene="Cre-spp-1" /locus_tag="CRE_04794" /note="contains similarity to Interpro domains IPR011001 (Saposin-like), IPR008139 (Saposin B); coded for by the following C. remanei cDNAs: DY525990" /codon_start=1 /product="CRE-SPP-1 protein" /protein_id="EFO86778.1" /db_xref="InterPro:IPR008139" /db_xref="InterPro:IPR011001" /db_xref="WormBase:CRE04794" /db_xref="WormBase:WBGene00055742" /translation="MARILPCLFLVLLAVSPFLASPSNPLNLKKHHGAMCDVCKALVD GGEKVGDDDLDAWLDVNIGTLCWTMLLPLHHECEEELKKVKKELKKDIENKEAPEKAC KDVDLC" gene complement(<729252..>730897) /gene="Cre-umps-1" /locus_tag="CRE_04795" /db_xref="WormBase:WBGene00055743" mRNA complement(join(<729252..730181,730230..730679, 730730..>730897)) /gene="Cre-umps-1" /locus_tag="CRE_04795" /product="CRE-UMPS-1 protein" /db_xref="WormBase:WBGene00055743" CDS complement(join(729252..730181,730230..730679, 730730..730897)) /gene="Cre-umps-1" /locus_tag="CRE_04795" /note="contains similarity to Pfam domains PF00215 (Orotidine 5'-phosphate decarboxylase / HUMPS family), PF00156 (Phosphoribosyl transferase domain); contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR014732 (Orotidine 5'-phosphate decarboxylase, subfamily 1, core), IPR004467 (Orotate phosphoribosyl transferase), IPR001754 (Orotidine 5'-phosphate decarboxylase, core), IPR000836 (Phosphoribosyltransferase), IPR002375 (Purine/pyrimidine phosphoribosyl transferase, conserved site)" /codon_start=1 /product="CRE-UMPS-1 protein" /protein_id="EFO86899.1" /db_xref="InterPro:IPR000836" /db_xref="InterPro:IPR001754" /db_xref="InterPro:IPR002375" /db_xref="InterPro:IPR004467" /db_xref="InterPro:IPR013785" /db_xref="InterPro:IPR014732" /db_xref="PFAM:PF00156" /db_xref="PFAM:PF00215" /db_xref="WormBase:CRE04795" /db_xref="WormBase:WBGene00055743" /translation="MSALTDNTRNGALKRNLLRQMLKAGVFKFGEFQLKSGQISPIYI DLRECFGHPELLMLISEALSRQIESSGVQYTGVLGIPYAALPYASVAAGQYLKKPLLI VRKEAKSYGTKKLIEGLYQPNDQLVLIEDVVTTGGSILDVLKVIQAESLVASDVFCIL DREQGGSQKLKDAGVTLHSLLDMNTVLTFLLSTGAVTEEQWHGIVKALNLSYTSPVKL IIDKDLENLSNLPYVENARTPLAERESLTESSLNRKIISIMRNKESNLCLAVDYTTTS EVLQMVELAGPFVLAIKLHADAITDFNEDFTRKLTTMANDMNFIIFEDRKFGDTGNTN LLQLTGAQKIASWADVVTVHAVQGSDSIAGVFRKLAVDPAYRLSGILLIAQLSTKGSL TALNGYTERAVEIGNDNRDVVSGFITQTRVSACSDLLNWTPGVNLDAKTDSTGQQWRG VDQAIDVQQNDIIIVGRGVTSSSEPVQQLKRYIFSSFLVLKWHSSVSRYRQIAWEALT RNDTSIH" gene complement(<737692..>738039) /locus_tag="CRE_04796" /db_xref="WormBase:WBGene00055744" mRNA complement(<737692..>738039) /locus_tag="CRE_04796" /product="hypothetical protein" /db_xref="WormBase:CRE04796" /db_xref="WormBase:WBGene00055744" CDS complement(737692..738039) /locus_tag="CRE_04796" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86597.1" /db_xref="WormBase:CRE04796" /db_xref="WormBase:WBGene00055744" /translation="MSVSSLSTYPQMNVETFASFRRIKIIETKEKLGADEVCSEAEFA PNHTDNWPFGETRQSAKKKKINMNQEETGNAQRQGIKNRKRKEEMIVVMSQKKGKEMG NWAKIHNNKNGEI" gene <738583..>744654 /locus_tag="CRE_04594" /db_xref="WormBase:WBGene00055745" mRNA join(<738583..738729,738777..738852,738899..739148, 739419..739492,741295..741443,741903..742059, 742164..742517,742617..742779,742898..742951, 742999..743200,743252..743548,743671..743813, 743858..744113,744165..744261,744345..744515, 744563..>744654) /locus_tag="CRE_04594" /product="hypothetical protein" /db_xref="WormBase:CRE04594" /db_xref="WormBase:WBGene00055745" CDS join(738583..738729,738777..738852,738899..739148, 739419..739492,741295..741443,741903..742059, 742164..742517,742617..742779,742898..742951, 742999..743200,743252..743548,743671..743813, 743858..744113,744165..744261,744345..744515, 744563..744654) /locus_tag="CRE_04594" /note="contains similarity to Pfam domains PF00566 (TBC domain), PF02759 (RUN domain); contains similarity to Interpro domains IPR000195 (RabGAP/TBC), IPR004012 (RUN)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86917.1" /db_xref="InterPro:IPR000195" /db_xref="InterPro:IPR004012" /db_xref="PFAM:PF00566" /db_xref="PFAM:PF02759" /db_xref="WormBase:CRE04594" /db_xref="WormBase:WBGene00055745" /translation="MFSSSSKLSRHDEGCERMTRNGSVCAVEESEPDMPTQHKEVLLT KLKIEIKNIMAEHGAKKYLNLNSPYVTSLCVAVDACLMDGLRRRLLTLFNSPSSMSLL QIIAKSNGSAQQVLDQTKTIEEHHTSVIPMHLIWIREALYMKSLSTIINHFIDSKSVR RYYDSNALLMDPVKGRLVATLLLAPCMVTYRRMSSRNDQEATAEELVEGAVRVRNGEN SGSTSGVGSRPPLSITRQVSSIAASVERNGSVSRDYVFSLHHSCKSTLLYGKNNVCVA MNGNDFAKGYMSLQKFYDGNLSLKWVPNQLMHASSQPSSGHSNNGEFTNIWKNTINIE MQDIIYIHLHQKDESSPTCLTFVNCEGVQSAPFQLPAGQHSIAFLSSLETGLAPLLRL DPPLWTGSTKEKILPRLRKRSTAVANPAMLDYVFRLVRTSGIEPAPEDIEDPLAPSPI PPMHDNCVSLPNSPYIVDNVDSIVNFQIGKACQSMRNQIMARAFYGWLTYVRHLRTIR THLLHLVDTKTLICDDDCDPVDEKFWKQCRAEPTKENEEEFLKRVYWRGIEGVNSKEI RRMAWPYLLGLFEWAEYPEGRLEQFTKQYWEDIEEWRVLEAEVRRRDEEAFRAARAKK AASPVREESCEVFEDPNEPTCSQHYDRENLISLFRANLHRIDKDVERCDRNLMFFSNK DNLESLRRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDGQLNYTYNRKCINLISEAL TLECFSILMIRQRGKFPQRPGMSKCLLNLRSLIQVVDPQIYALIADIDYAQALSFAFR WFLLDFKRELSYECTYKVWEVIWAAQRLRISNDFSIFFGLATITNYHDVLITNNFDYT DMIKFFNEMAERHDCSRLLSSARTHVKCLQNLVQHLK" gene <750799..>753024 /locus_tag="CRE_04595" /db_xref="WormBase:WBGene00055746" mRNA join(<750799..750891,750976..751071,751442..751653, 751704..752018,752064..752201,752247..752359, 752529..752609,752903..>753024) /locus_tag="CRE_04595" /product="hypothetical protein" /db_xref="WormBase:CRE04595" /db_xref="WormBase:WBGene00055746" CDS join(750799..750891,750976..751071,751442..751653, 751704..752018,752064..752201,752247..752359, 752529..752609,752903..753024) /locus_tag="CRE_04595" /note="contains similarity to Drosophila melanogaster Flybase gene name is CG9520-PA; FLYBASE:CG9520" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86748.1" /db_xref="WormBase:CRE04595" /db_xref="WormBase:WBGene00055746" /translation="MANWPRISPLAYVALGVLLGLTLSIITQSGNSAYDAASRIAIIR ANRNDPQLEEHDHAHGNDPHGDEEVDDNHADFAPVQFHSNDSSHSHDGESIIADEISK KVRVFCWILTGKQNHEKRAKHVKATWAKRCNKYVFMSSEEDAELPAINLNVSEGRDYL WAKTKGAFKYIYDHHLNDFDWFLKADDDTYVVMENLRFMLLAHSPDEPIHFGCKFKPF TKGGYHSGGAGYVLSREALKKFIEVALPDKSLCSQNHGGAEDAEMGKCLEKVGVKAGD SRDADGHHRFMPFVPEHHLSPGHVDPKFWFWQYTYYPMDQGPTCCSDYAVSFHYVSPN LMYVLEYLIYHLKPFGIDRAIRIPKNDTIIHTAYSISRSERGQDDAFLERPEVPL" gene complement(<753608..>754590) /locus_tag="CRE_04797" /db_xref="WormBase:WBGene00055747" mRNA complement(join(<753608..753764,753925..754047, 754229..>754590)) /locus_tag="CRE_04797" /product="hypothetical protein" /db_xref="WormBase:CRE04797" /db_xref="WormBase:WBGene00055747" CDS complement(join(753608..753764,753925..754047, 754229..754590)) /locus_tag="CRE_04797" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86659.1" /db_xref="WormBase:CRE04797" /db_xref="WormBase:WBGene00055747" /translation="MISTNTYDSFLPESNDHLNPLSQLLFPPRHHQNKLDFVFLEGKM NEECNVKIPSSPSSLFSLFISPRLFISFRLKLYHFLNFRIKMDTVVPVPNAATIENGS ANSGYFTPKGYLNQNIVKEAEAVREKRIESPRFSTTSSEYNVPVSPSSRFPSSSPLIV ISPPKDDATPITVLPTAVRSMPDTHHRSLMVAIIAALLVFTAVVFMLLLVIFS" gene complement(<759573..>761097) /locus_tag="CRE_04798" /db_xref="WormBase:WBGene00055748" mRNA complement(join(<759573..759638,759789..759966, 760010..760185,760233..760572,760616..760707, 760761..760925,760972..>761097)) /locus_tag="CRE_04798" /product="hypothetical protein" /db_xref="WormBase:CRE04798" /db_xref="WormBase:WBGene00055748" CDS complement(join(759573..759638,759789..759966, 760010..760185,760233..760572,760616..760707, 760761..760925,760972..761097)) /locus_tag="CRE_04798" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86578.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04798" /db_xref="WormBase:WBGene00055748" /translation="MGVVRRGSDVTSHVSSSGKSGAAPCLQHFSVIRSIGRGAFGKVC IVQERKTKKYFALKYMNKRRCIEKGVAANVIRELTLLSKISHPFIVNLWYTFQDPDYM YMVSDLLLGGDLRYHLTQQGKFAEDRAKLYLCEICLAVEYLHEMKIVHRDIKPENILL DEQGHAHLTDLNLATQLEDDQLATSYSGTRPYMAPEIYATYLELEDGYDSRVDWWALG VCFYEMLRGRTPFEFSSRTKPEEAYVAFRESSIPYPAHWPTDLIHFINTMLKFDKEKR IIGLEAIKKHAYTERIDFKSVFERKPAPVFIPCKEGLNCDPMYELEERILVSTPIHRR RTNHNNSSGRSSSEPQNAALVEVSKAFIDFSRHNMKIEPNGLCRSN" gene complement(<764400..>767321) /locus_tag="CRE_04799" /db_xref="WormBase:WBGene00055749" mRNA complement(join(<764400..764927,764975..765380, 765425..765642,765695..766011,766055..766577, 766622..766738,766829..766940,766990..>767321)) /locus_tag="CRE_04799" /product="hypothetical protein" /db_xref="WormBase:CRE04799" /db_xref="WormBase:WBGene00055749" CDS complement(join(764400..764927,764975..765380, 765425..765642,765695..766011,766055..766577, 766622..766738,766829..766940,766990..767321)) /locus_tag="CRE_04799" /note="contains similarity to Pfam domain PF06733 DEAD_2; contains similarity to Interpro domains IPR014013 (Helicase, superfamily 1 and 2, ATP-binding, DinG/Rad3-type), IPR010614 (DEAD2), IPR006554 (Helicase-like, DEXD box c2 type), IPR006555 (Helicase, ATP-dependent, c2 type), IPR013020 (DNA helicase (DNA repair), Rad3 type); coded for by the following C. remanei cDNAs: DT933918, DY525431" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86847.1" /db_xref="InterPro:IPR006554" /db_xref="InterPro:IPR006555" /db_xref="InterPro:IPR010614" /db_xref="InterPro:IPR013020" /db_xref="InterPro:IPR014013" /db_xref="PFAM:PF06733" /db_xref="WormBase:CRE04799" /db_xref="WormBase:WBGene00055749" /translation="MEEFSFPFQPYDIQNRLMREIRSCIEHGKVGIFESPTGTGKSLS VLCATLTWLENEDKQIEAELESKLKTVQLELNKSEKTTENWEAALKNKIKSEKEKEGI VEKIEERKRLTKRIDQAKQGVIDISRKRKAPARHNDFALVDDEPTDEASPSEEYHSDG ENGQSIAKLMDENCEIEQEDELPKCLKIFYASRTHSQLEQLIDELGKTRFLPRVVTCS SRGNLCVNEEVKKLKLNHLINEKCMELRKNGTSEKDKKQKTEEGAKKIRSCAKSCEFH NSSQIEDLVNGILANKLKTALQLTKEGISSKGCPYFASRKAVPQCQLVLLPYQVLLHE GTRNAWGIDLKDNVIVLDEAHNVLSTINSIYSSEVSEKSLTLALKLIREYNAKYKLLL KAKNLLYMKQLEQLTSKMLIFLNSESKEDVMTMAQLSRNLNILELNLFKLATYIEKTD LCKKFHGFYLQSKRNEIITKKENDKPKLTGIQKLMVKKEENQKQKADESEDVQPQITV SSPLFSLKSFIDALTNKCEDGRIIIDKTNGSKFRYILLNPADRLAEVVKACRATILIG GTMEPSQLLVETLSRGSIGQDSISRFSCAHVIDDSQLLAVTINKTTDGKPFKLTFETR KSHETLKALCRSLQVLTQHLPNGIVIFVPSYEILSDIIRKAKETGIMEQIERKKTVFA ESRHSTPNMLADYSTAARTPKGAILFAVMGGKMSEGINFSDELGRAVIVIGLPYPNKT GVELRERMRVSLQVIVQSWVFYFQFLDSQMPNGGNMLYESMCMHSVNQSIGRAIRHRK DYAAVYLFDERFSQESTRCKLSAWIGDRTQTNLGFSEIIQKSNLFFKANSTK" gene complement(<767528..>769380) /gene="Cre-tag-235" /locus_tag="CRE_04800" /db_xref="WormBase:WBGene00055750" mRNA complement(join(<767528..768200,768247..768306, 768352..768772,768822..768904,769115..>769380)) /gene="Cre-tag-235" /locus_tag="CRE_04800" /product="CRE-TAG-235 protein" /db_xref="WormBase:WBGene00055750" CDS complement(join(767528..768200,768247..768306, 768352..768772,768822..768904,769115..769380)) /gene="Cre-tag-235" /locus_tag="CRE_04800" /note="contains similarity to Interpro domain IPR016181 (Acyl-CoA N-acyltransferase); coded for by the following C. remanei cDNAs: DY524702" /codon_start=1 /product="CRE-TAG-235 protein" /protein_id="EFO86580.1" /db_xref="InterPro:IPR016181" /db_xref="WormBase:CRE04800" /db_xref="WormBase:WBGene00055750" /translation="MLTEKSKPTCIRKELNTLNRFKRIPRNQTDQIPQYASGNMPTLR GCFEKKAPMAREMATLMTREYFPRPYSRQLGEKKTNVARERVQRKMVMEDLTNVNRNR KYISDGLSAVKMTFLQNMNDMATAPRFSPEMVYQHFGDEETIYGYDDLEVTIHHTAQT LHCYVNISYSSKVKSDKGLEADDIVEKLVHPDVRPNVLVSGKGEFQQKLLGQKDFKPF GEMVHKFRSKGKDFEVYRVSEQSEEFNLFLERIQTLGMFFIECCSLTDNSEENWLHYF IYERCDTGEGDGSTVANVAGFATLYKFYNYCDKIRPRIAQMLLLPQYRKSGIGAQFME SFLRDLRATPEVFDVTVESPGEQFTYLRDYVDCVNCMSLHEFSSENLKNGYTEGMRLA CLTKLKISKMQSRRVYEILRYRATNKKDKEALKAQRIDVKKRLYVPMKRSDKDWRRLN MALTAEELRQAACGEIDEDNKFSTLVQMYDKLMESYQKTIDRIEAHPNIF" gene <769742..>772569 /locus_tag="CRE_04596" /db_xref="WormBase:WBGene00055752" mRNA join(<769742..769972,770053..770214,770260..770459, 770507..771340,771395..771630,771679..771820, 771871..772132,772179..772325,772369..>772569) /locus_tag="CRE_04596" /product="hypothetical protein" /db_xref="WormBase:CRE04596" /db_xref="WormBase:WBGene00055752" CDS join(769742..769972,770053..770214,770260..770459, 770507..771340,771395..771630,771679..771820, 771871..772132,772179..772325,772369..772569) /locus_tag="CRE_04596" /note="coded for by the following C. remanei cDNAs: DY528033" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86658.1" /db_xref="WormBase:CRE04596" /db_xref="WormBase:WBGene00055752" /translation="MDNLFQFKENVSPQVQSTSPSNCMVVRGGTIPASLQPFPGMEHD RTLLNELSQETSSNGFSQFVETPREFEDDKEIEVAAAASENKESPKTLPAIRSPTPPV IRILPETAPSNQTLSPLHINVNDCSKIDSQCDSSRDSKLSSNGSSVQKTVFQTPSLRI TDRASTSTDSNPIVMGPPSSTNTQVLLSPAGNLHNGFPRKSSGDSSPSVVRAKGNKSP HQFSFQRNHPSQRSNNISGVSSRPSSSLASPQGGGRKDHEMTRRRALVDRITKCRGSD YVHLLPQTEGLSHTQTSILLRKNRGTLITEGMPYSMQKLIDCGPEADKTDKAFVEKIR EANQKRIRHNNLDELTDVSDLEDDHETSNAEPKNRRSPKNFPRWTPKRMRYSGMLSRA ETLLDEKIALLGMLKNQYSVMDGSAGVRFEKEEPIPRRRRQLNGMYFLYDKSAFRRVS ANHFGCSRAMPIQSWTKRSLQQDIFEESTSEKPQSAGPAVVKPSLNPSDKWVATAQKN VVTYLTNGEKREITEYDYEEYKAGEGIQRVNELSSLDPIEFVLSSDFNTFEDRQMSYL YRQSTAPSCIIRKKHGKSVHFEIDDRKPSDQNSVLKKKTDKKKERKPVEEDSSNDEIE EEETEEPKVPSKKRPRGRPATTKRKSSKMSVAAKLSNGIYLDYLFEDFMAEDVCTKQL PNKITYASIAVPNWYKIPEDYWDDVPASSKTGSDDLLIPVAKQHHKLMHAERDRIKRE TDKRIRNRQAPTLNEDGLDADGYPPFDMQQFEPDIITSRRLYVSVVTPYEQRDFLNNL NSQSTT" gene <773547..>776308 /gene="Cre-ymel-1" /locus_tag="CRE_04597" /db_xref="WormBase:WBGene00078742" mRNA join(<773547..773613,773669..773797,773851..773946, 773992..774206,774257..774386,774511..774617, 774663..774922,774968..775072,775120..775582, 775626..775862,775910..>776308) /gene="Cre-ymel-1" /locus_tag="CRE_04597" /product="CRE-YMEL-1 protein" /db_xref="WormBase:WBGene00078742" CDS join(773547..773613,773669..773797,773851..773946, 773992..774206,774257..774386,774511..774617, 774663..774922,774968..775072,775120..775582, 775626..775862,775910..776308) /gene="Cre-ymel-1" /locus_tag="CRE_04597" /note="contains similarity to Pfam domains PF00004 (ATPase family associated with various cellular activities (AAA)), PF01434 (Peptidase family M41); contains similarity to Interpro domains IPR003959 (AAA ATPase, core), IPR005936 (Peptidase M41, FtsH), IPR003960 (AAA ATPase, conserved site), IPR000642 (Peptidase M41), IPR003593 (AAA+ ATPase, core)" /codon_start=1 /product="CRE-YMEL-1 protein" /protein_id="EFO86711.1" /db_xref="InterPro:IPR000642" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR003960" /db_xref="InterPro:IPR005936" /db_xref="PFAM:PF00004" /db_xref="PFAM:PF01434" /db_xref="WormBase:CRE04597" /db_xref="WormBase:WBGene00078742" /translation="MQAVNLNIGGLLQNTGLLRSRNGISRKPLDIDKTATSLCRIYYS VWRQFSTATPSEISKMSQNLRDSMLTRRMARKSEIFLNYDDAMIRIVPSTSSFYVQRR GFRTRKQTFGVGNPGKTQEEEVKSPLTYISELLVGKKVKTSEGGVEKWNQYESDLKKL PEGQQRTYTDGFVKGLLSNGTSGAGKDVKKSSTLTRFYIFLVFCIFFGYLTGRIRVRV GDRQIGSLFFSNPQEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRL PKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTSGSEFDEVLVGQGARRVRDLFDKAKA RAPCIIFIDEIDSVGSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVED LDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHNGAIDPNILAKGSTGFTGAD IENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAG HTLVSLYTKDATPLHKVTIIPRGQSLGHTAMLPDKDSYQLTKAQMLATLDVMMGGRVA EELIFGEDKVTTGAADDLSKATQLAIQMVKVFGMSDKVGLRDFTAEDRDSSLVKVSDL SPQTAELIDGEINRVLQESYKRAKVILETKKVYIRVSDIYLFFNSFQKEHQLLAEALL EYETLSADEVRRVISGQKIKRPTPAAVKKSNEMRKNQPSLVLHLFEEEGRGKQ" gene complement(<776763..>777907) /locus_tag="CRE_04801" /db_xref="WormBase:WBGene00078757" mRNA complement(join(<776763..777031,777083..777225, 777278..777388,777575..777705,777752..>777907)) /locus_tag="CRE_04801" /product="hypothetical protein" /db_xref="WormBase:CRE04801" /db_xref="WormBase:WBGene00078757" CDS complement(join(776763..777031,777083..777225, 777278..777388,777575..777705,777752..777907)) /locus_tag="CRE_04801" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86883.1" /db_xref="WormBase:CRE04801" /db_xref="WormBase:WBGene00078757" /translation="MSEQETKKLEGLVKQLKTEINAKKAILEEVLRTVDKDQDKSSSV KKRVYIREILNCEVSIPCSINEIFCADLIDYFRFETHFVARFKIRNTSEGDFSHQSAV LCVSASFSAFFDDEKISLSIHGKIIQAQSQIFNSPFRLLIECNQTTAAPPEACISELI SIAEATEDLDLKAIEYMDEKSAVRIVQSLFVVYSHLEIQSSLKFSIFRRNFPTFVEND FETWRLYTGSDRFEGILVYTQIDGDVMKSRVIANNIACCQKFLKIINEKCF" gene complement(<778059..>780654) /locus_tag="CRE_04802" /db_xref="WormBase:WBGene00055753" mRNA complement(join(<778059..778232,778280..778523, 778568..778827,779892..779952,780020..>780654)) /locus_tag="CRE_04802" /product="hypothetical protein" /db_xref="WormBase:CRE04802" /db_xref="WormBase:WBGene00055753" CDS complement(join(778059..778232,778280..778523, 778568..778827,779892..779952,780020..780654)) /locus_tag="CRE_04802" /note="contains similarity to Pfam domain PF08572 pre-mRNA processing factor 3 (PRP3); contains similarity to Interpro domain IPR013881 (Pre-mRNA-splicing factor 3)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86786.1" /db_xref="InterPro:IPR013881" /db_xref="PFAM:PF08572" /db_xref="WormBase:CRE04802" /db_xref="WormBase:WBGene00055753" /translation="MMYKAQQEIEEKRRKMAMAAGTHQLKSSHSASAQVSAGAKGLSL GKEEATMFVNFSMDKTTRIEQLKAKLARQPVVAKLNALVANAPAGVMAPLSEAVQQVE KKVQQQITKESKEPEKLIEYLDPRINAKTADRRRRGFNFHEKGEFEKLANKQRALAKL ERLQNEVSSAAQSTGISSAVKLAMVTPSGTARIENGVPEIEWWDMLVLDKVNYDEIPP EDDVERYSQTVSELTEKIRLGLEKAPEPKVKISNLMRVLGNEAIQDPTKMEAQVRKQM AERLKKHETLNAERKLTEDQKRAKKTKKLSEDTSTAVNVSVYRVKSLAHPSKKFKVET NAKQLQMSGAIMMHKAQNVIVVEGGPKQQKFYKNLMLNRIKWTDEIVGQKKDAEKDAP GERNLCEMIWEGQVKRRNFRDFTVHTATLEKQAREFFEKHGVAQYWDLCYSTTVLLEG QDILPTA" gap 778831..779856 /estimated_length=1026 gene complement(<780749..>781090) /locus_tag="CRE_04803" /db_xref="WormBase:WBGene00078735" mRNA complement(<780749..>781090) /locus_tag="CRE_04803" /product="hypothetical protein" /db_xref="WormBase:CRE04803" /db_xref="WormBase:WBGene00078735" CDS complement(780749..781090) /locus_tag="CRE_04803" /note="contains similarity to Xenopus laevis U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70)s(U1-70K).; SW:P09406" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86654.1" /db_xref="WormBase:CRE04803" /db_xref="WormBase:WBGene00078735" /translation="MGKLEDICDRYLSRREEQKKVIEAVERCLKKGYDFEKLRERVQD VVEDSHKATKVISAVCDHYPQLRKRTRNDRDEERDRDRKRDRGENRSDNRKDRGTEKE KDREXXXXTQM" gap 780762..780771 /estimated_length=10 gene complement(<781860..>785317) /locus_tag="CRE_04804" /db_xref="WormBase:WBGene00055754" mRNA complement(join(<781860..782032,782080..782834, 782880..783376,783615..784268,784317..784725, 784770..784835,784878..785037,785082..785151, 785201..>785317)) /locus_tag="CRE_04804" /product="hypothetical protein" /db_xref="WormBase:CRE04804" /db_xref="WormBase:WBGene00055754" CDS complement(join(781860..782032,782080..782834, 782880..783376,783615..784268,784317..784725, 784770..784835,784878..785037,785082..785151, 785201..785317)) /locus_tag="CRE_04804" /note="contains similarity to Pfam domains PF00271 (Helicase conserved C-terminal domain), PF00176 (SNF2 family N-terminal domain); contains similarity to Interpro domains IPR000330 (SNF2-related), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal); coded for by the following C. remanei cDNAs: DR409694, DR778902" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86843.1" /db_xref="InterPro:IPR000330" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00176" /db_xref="PFAM:PF00271" /db_xref="WormBase:CRE04804" /db_xref="WormBase:WBGene00055754" /translation="MSSSNFETGERVRIAHQGNPQSSSLQADMDAKKALLSQNINGSL NHSAPRPPRTTGAGFKYGERKPKRQKGSDEDDEDYVDEAIPSEDEEDFDMNEEEDDDD YEEETSRKRKTPAKKKTAAPRENYRREDSETPEPEMKRIRTLSDSSDDEWLTKPRFNG SVSPKNVMRTQMAKRSAASKRKIIIDDESDDDFINDDDASDKESGKNSEKGSSKDSDK GSDNEELTMRQGQSLKAAVEKTQKQVKKKVESDEDWEEDEDDINADGDETPSDDSDIE ERRAKRGETKNQKECREFFNSATKELLLQQARVNDKIAEFFIANRPFETYNVMMNTMR GVTRGTNAIEAYMEYLEKRGILSRILDDCKDHAKTVAKDFERCTEGPLELPLLKEGCT LHDYQLVGVKWLIMMNNKELNAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPS STIENWIGEFHKWCPSLKLLTYYGTQDERKHLRHRVKKQKDNIDVILTTYNMVTSKSD DKKFFKNFSLNYVIYDEGHMLKNCDSDRYKGLMKVKGKRKILLTGTPLQNNLIELISL MYFVLFKVFNKYCEDITHLLQHFKQLGPALESKDKALYQQDRIEEAKSILQPYILRRL KNQVLSSLPTKSEQIIEVEMKKPQKQLYDDIVNVLQRPEEAGDSYGSLMRLRQAANHP LLRRSEYTDAKLDKIAKLLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCEKFRCTSK FLLNEELALKSGKCEQLDKMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRL DGQTPVLDRQEMINEFNISKDLFVFLLSTKAGGLGINLTSANHIIIHDIDFNPYNDKQ AEDRCHRMGQEKSVHVTRLVSKCTVEIGMLALAKKKLQLEKQVTDGVKGQLDEDALRE LREEEGGEQIEGRDLSKLLSSAINGRYDDVEDSGDSNGVDAKEDESKPSTSA" gene complement(<785880..>792272) /locus_tag="CRE_04805" /db_xref="WormBase:WBGene00055755" mRNA complement(join(<785880..786372,786419..786719, 786763..788144,788193..788399,788451..788794, 788842..789927,789972..790379,790431..790568, 790706..790861,790906..790998,791044..791185, 791224..791489,791516..791648,791696..791820, 791868..791978,792029..792150,792203..>792272)) /locus_tag="CRE_04805" /product="hypothetical protein" /db_xref="WormBase:CRE04805" /db_xref="WormBase:WBGene00055755" CDS complement(join(785880..786372,786419..786719, 786763..788144,788193..788399,788451..788794, 788842..789927,789972..790379,790431..790568, 790706..790861,790906..790998,791044..791185, 791224..791489,791516..791648,791696..791820, 791868..791978,792029..792150,792203..792272)) /locus_tag="CRE_04805" /note="contains similarity to Pfam domain PF02985 HEAT repeat; contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR005829 (Sugar transporter, conserved site), IPR000357 (HEAT)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86606.1" /db_xref="InterPro:IPR000357" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR011989" /db_xref="PFAM:PF02985" /db_xref="WormBase:CRE04805" /db_xref="WormBase:WBGene00055755" /translation="MASDESIIPKESTSSSSLETANDVERIFLRLVHADTDVKLQSVT DRHLCDILELADRKTELVNLISEFLNHFNKVVRSNLAIRLPVSQLIKVFEKNGACSSN LSLIYLKYAKERMDGPEQLKVLPIYMKHFSKKPTDLNYIYDIFTICLPGFHELAGMER KDWPKIEISSTDAEILARCFQAILTFSSLHDVTFYFSEVLGRRLEQITGLAEKPKIPG LCIDEFIHIGKKLFHENLNLAETKMMILKLLGKELLEEKVGFPLIVVATASRLNEFVP VDDLAQSLLKKIPTENLVNERSVVDKLMYAYLGSEALTTKPGKAELLVAHGDEFSQAA VLTYLSKSKIAPTAYMNNVKVCLHGCESPSSRVQVSTMHFFQLVVEQMPDKALKLFAA VLFKKLFELLPRPETAASSSPNKVALCGIYRCLSVLGIKHPDNVLKNWRVAYQMFISL DTETVEDVASAIAACLISWIPLFAEAKDQELRQKTTTVISEIMMSKENHARMVAMKYA EVMMGDGNTTLLWNLIRSAGDNRDTIRSGAFRQLEKSLEKHSPHTSSIIEDFWKNLHP DFPPNKGETPTLPLFNILIHQAASRYLYGTFETKVMGEPAHLRIVDGDDHWITVAPRI VKLLHGEGNAEKVRKAAEIALFSAINSTGLCFKQTFFTNIFFPDVHLVRIASCFIAAY RSFPQHNSGHSSYPPFQYAVQQCSQKLRDSTRMEYSIALTYLLSILLHEDQVTRVELF NSSKSLLIEKEIPGLSFTCAAAITPVLGAQFIPPVGTSEFIMEVFLPLIKNGYHRPTS ALESTLGALYFVLQNNTEALDQKAHSGIIISLIENCEKIAVSRQDSFTQKTREFSAKV IGLLGGRIEDDEPSYERLAQSLNRIGQGPPQQELQMVVGEAIVDSILGNLAMTKRDFN LVDGTGLTLVQRLETDVRLEIVNKRLIKFITETLEHKKTNANQHFRKAELIWLLIVIQ NFANLKAEVLKKAELLRALQQSFADGLTENDEFSQDISAKGMGVVYGLADGSLKKGLV ESLMNTLSEGKRSEAKLEKDTKLFEAGQLGTTPTGGKLTTYQELLTLASDLNQPDLVY KFMQLARHNATWNSKMGAAHGFGALLENAKEELEPYFKQLVPKLFRFRYDPDVKVQNA MRSIWGILTADRKNVVDEFANEISKELLPALTDREYRVRESACLALLDLFRGHDTVEM HQLIPEYLEAVLRVRDDVKESVREASNRAADAIAKLIVRLGSSSNLEKANRFLSVALP AIIDQGILKSTVKSNMIFCLSLVLELTKSAGKQLKPYMADLIPILMDAVSENETPLLN YLAARSDQHQIEMLDDARASLARSSPMMTAVNDLLPHIDSEVLIKMTPRVAETLRSSV GTSTRSSAAQFVTQLALRAPQLLYDHTAQCDKLFAALIPGVRDRNPSIRKQFANAMSY LAKYSSSNQMKKLIKTVVADLIGSDGNFNLIKYSDCKFFFSEELKVSSCHVISNLAAN SSEVLEGYTSQIVPYVLLEKCREVPKGDDVAREKQEKWNDVWSELVPSTSAAARLYKS EILELAMKLVTNNEVWAVRKQAAVMIGVLFESLKSEAGIEIAKKSAFCLLQNLNGRLW DGKVEILKALTKTFEAGGSQFVENLQSSEAEEIVKVLRREASKKNADYACAGLSTLAA WSVITKDIESANWLAEKVDENVTKLTSIREGNESDDNMDGLSNLEKEIRASQLVTLNL TALAISLATFNTSEQAEKSLNRVAGYVNNNLIAWKSKQFFFNELVKTIENWHPEETVN AEKLITNLLEQADELCAQQKKTVAADALQVVLRTQNRSKQFGVDWETVIDRVMRGTAG QITGLGSRFEIKMEID" gene <792659..>793676 /locus_tag="CRE_04598" /db_xref="WormBase:WBGene00055756" mRNA join(<792659..792704,793375..>793676) /locus_tag="CRE_04598" /product="hypothetical protein" /db_xref="WormBase:CRE04598" /db_xref="WormBase:WBGene00055756" CDS join(792659..792704,793375..793676) /locus_tag="CRE_04598" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86576.1" /db_xref="WormBase:CRE04598" /db_xref="WormBase:WBGene00055756" /translation="MVASTVWDEKVSEFKVSLLFIRGTLLSQSKSSNTQWSQFAQLPL NDWFLAFNGYAAHARSRVILPSVVKHTAGFSWRTVQGSASTQDSGSVTLFLIPIISPG WHQDGNPSNQNIC" gap 794076..794508 /estimated_length=433 gap 795474..795483 /estimated_length=10 gap 796457..797010 /estimated_length=554 gene complement(<800070..>800956) /locus_tag="CRE_04806" /db_xref="WormBase:WBGene00055757" mRNA complement(join(<800070..800168,800217..800293, 800341..800464,800509..800772,800819..>800956)) /locus_tag="CRE_04806" /product="hypothetical protein" /db_xref="WormBase:CRE04806" /db_xref="WormBase:WBGene00055757" CDS complement(join(800070..800168,800217..800293, 800341..800464,800509..800772,800819..800956)) /locus_tag="CRE_04806" /note="contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain; contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86717.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR011333" /db_xref="PFAM:PF02214" /db_xref="WormBase:CRE04806" /db_xref="WormBase:WBGene00055757" /translation="MTTAYDDDHCSRIIKLDVGGKIFKTSISTLTKHDSMLKTMFVTR IPVKKDDEGCIFIDRDSQHFRLILNFLRDGQMALPDSDREVKEVLAEARYFLLDPLIE LCEERLETSISPYYHVVSTVLEARKYIFATEKPVVVLRLPVYIATNGSQCYYFSETKF REFAELHHKLVSFVLITEPEFNEDCSWTFFLKTKKITARVKGPADNNLLEDCFTQLLE DVKERRRESSVSEDN" gene complement(<801192..>803224) /locus_tag="CRE_04807" /db_xref="WormBase:WBGene00055758" mRNA complement(join(<801192..801426,802081..802202, 802248..802389,802431..802570,802614..802775, 802823..802918,803132..>803224)) /locus_tag="CRE_04807" /product="hypothetical protein" /db_xref="WormBase:CRE04807" /db_xref="WormBase:WBGene00055758" CDS complement(join(801192..801426,802081..802202, 802248..802389,802431..802570,802614..802775, 802823..802918,803132..803224)) /locus_tag="CRE_04807" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86806.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04807" /db_xref="WormBase:WBGene00055758" /translation="MGCVSSRIPVIIGEGYHLKVKKTVAVGGSAKIMEVDPGGNKESM IVKKMVAFSKREEERINQEIDLYKKLANNEFVIDLVAHIVDDINHYLLFKRYPTNFSE YLETEKTRDTINELQHLKYFFGIVSAIEELHSFEFAHLDIKPANIMKSGEEIKMIDFG SATKMPIEIKTPADHHKHKEDAEELCSMMYRAPELFNCEIGSTLTTAVDVWALGVCLY EFMYLENPFNKTYEQGGSIALATQSPHMIKWISKKSVSQKTIELIKTILIVDPEKRPT IGELRIKVIELLDNWNKSDSEPSEIGLIDPEKIENEQREITDEEFDLAMRQTN" gene complement(<803486..>805331) /locus_tag="CRE_04808" /db_xref="WormBase:WBGene00055759" mRNA complement(join(<803486..803641,803694..804042, 804085..804312,804374..804825,804872..805031, 805081..>805331)) /locus_tag="CRE_04808" /product="hypothetical protein" /db_xref="WormBase:CRE04808" /db_xref="WormBase:WBGene00055759" CDS complement(join(803486..803641,803694..804042, 804085..804312,804374..804825,804872..805031, 805081..805331)) /locus_tag="CRE_04808" /note="contains similarity to Pfam domain PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein); contains similarity to Interpro domain IPR002654 (Glycosyl transferase, family 25)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86831.1" /db_xref="InterPro:IPR002654" /db_xref="PFAM:PF01755" /db_xref="WormBase:CRE04808" /db_xref="WormBase:WBGene00055759" /translation="MFSYVILLNCIRLSSSLFPGAEPDEGDVRHLYPPIYIGVGLAEH AHAIPYLLGWVENLDYPKDRIKLEFFILNKEDATVHQVKWWLDSTKQYFKSVKVIEDV DNWLETALRNARLQKTERCLLISGDTVPTEMNMIQMLSNEKSHVAVSPLFQSIDDSSN IEEPSENLLRRINLREETFSFALPMVINLVSMDSSYLTFDKNNLPYYEGADDPSEVFV MSAKNMGISLWADNQVNYGIFVNPELDIEERRNVIRYQIADLIADEKTLPFVSRSVRP WQPESTKQGVDKIYLINLKRRSERLNRMHKIFDLLGVEYSLLEATDGQQLEDLPADLK NYHILNGYLDPITKRPMKKGEIGCFLSHYRIWQDVVKNKLKKVIVFEDDLRFSYNGLT RIKEVLQDLDASQKEWDLIYLGRKKQSDNEELWIPLHRHLSSVEYSYWTLGYMLSLSG AEKLLVPEPLKKVVPVDEYLPIMFNKHPNKEWSSHFEPLDLNAFTLYPLVVFPQRYTN EPGYVSDTEDSVIVTPKPKNTEL" gene complement(<806187..>808770) /gene="Cre-cul-1" /locus_tag="CRE_04809" /db_xref="WormBase:WBGene00055760" mRNA complement(join(<806187..806318,806362..806424, 806472..806795,806843..808592,808643..>808770)) /gene="Cre-cul-1" /locus_tag="CRE_04809" /product="CRE-CUL-1 protein" /db_xref="WormBase:WBGene00055760" CDS complement(join(806187..806318,806362..806424, 806472..806795,806843..808592,808643..808770)) /gene="Cre-cul-1" /locus_tag="CRE_04809" /note="contains similarity to Pfam domain PF00888 Cullin family; contains similarity to Interpro domains IPR016157 (Cullin, conserved site), IPR001373 (Cullin, N-terminal region), IPR011991 (Winged helix repressor DNA-binding), IPR016158 (Cullin homology); coded for by the following C. remanei cDNAs: DY529689, DR407470, DR781729, DR406474, DR407340, DR406353" /codon_start=1 /product="CRE-CUL-1 protein" /protein_id="EFO86583.1" /db_xref="InterPro:IPR001373" /db_xref="InterPro:IPR011991" /db_xref="InterPro:IPR016157" /db_xref="InterPro:IPR016158" /db_xref="PFAM:PF00888" /db_xref="WormBase:CRE04809" /db_xref="WormBase:WBGene00055760" /translation="MSHSEARRIQAGSEEVWTNLREGLDVAYRREFMSPKTYMTLYTS VYDYCTSITLSTNRRDGDERVSGADMVNPQRITGADFVGHEMYQKVEEYVSAYVTAVR EKGAELSGEDLLKFYTTEWENFRISSKVMDGIFAYLNRHWIKRELDEGHENIFMVYTL ALVVWKRNVFNELREKVIDAMLELIRSERTGSTINNRYISGVVECLVELGVDDTDSGE AKKDAEAKKLSVYKECFENKFLAATREFYAQEASNFLGNGGNVTDYMIKVETRLQQED DRCLLYLNSSTKTPLANCCESVLIANQLEFFQSHFGNLLVDKRDDDLSRMFKLCDRVQ NGLDQLRLSLERHITKEGFEALERVAQEASNDAKLYVKTLLEVHQRYQMLVNRSFKNE PGFMQSLDKAATSFINANAVTKRAPPAAQLTKSAELLARYCDQLLRKSSKMPDENELE DLQTKIVELFSLMFIIIYLSLQMIVFKYIDDKDVFSKFYTKMFSKRLISDLSASDEAE ANFISKLKSMCGYEYTARLSKMVNDTQVSKDLTSDFKEKKAHLLGEKAIEFNVLVLSS GSWPTFPNSTLTLPQQLSSTIEVFGQYYHEKFNGRRLTWVYSQCRGEITSSAFSKKYV FTVTTAQMCTLLLFNEQRSYNMEQISAATGMDAKTSSMIVGSLIKNQVLKADVPLQGD DIPMNATVTLSDSYSNKKVRVDLSKLSMKQDAVRDTESVQKNVDEDRKSVISACIVRI MKTRKRVPHQQLISEVIVQLQGRFKPKVDMIKRCIGSLIEKEYMLRVENQKDLYDYIA " gene <811070..>812253 /locus_tag="CRE_04599" /db_xref="WormBase:WBGene00055761" mRNA join(<811070..811102,811142..811492,811520..811637, 811682..>812253) /locus_tag="CRE_04599" /product="hypothetical protein" /db_xref="WormBase:CRE04599" /db_xref="WormBase:WBGene00055761" CDS join(811070..811102,811142..811492,811520..811637, 811682..812253) /locus_tag="CRE_04599" /note="contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86666.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="WormBase:CRE04599" /db_xref="WormBase:WBGene00055761" /translation="MEEIQAITEGKIIAKRWKVVEKLGEGGMGAVFKVRDLTRFQTYA AMKVEGDVSDGGVLKLEAYLLKALAPLPFCARLMDAGDRKTYCFMVMTLLGKDLMAHK REANIPKLCDQTTLRLAMATLFAIKQSHLRFQIHEVGYTHRDIKPGNCVTGIHGSDAK NVYLIDYGMVRSFTAKRDNGQLALRKARSGEQLFRGTPRYCSMNVHNRKEQGRVDDLW SWLYMLIELHCGLPWRRLTDEKEIMQAKSTCPMEVLLKGCPQEFTNIHKYLESLEYKT RPDYFGLWSECFSGFKRVRGSFFGRFEWELGKAGGEEMLTALSISEKRGPNDYKCATN MQMAKKIWPYADSAHFKKKILNL" gene complement(<813152..>818148) /gene="Cre-atx-2" /locus_tag="CRE_04810" /db_xref="WormBase:WBGene00055762" mRNA complement(join(<813152..813504,813553..813613, 813716..814039,814137..814442,814489..814916, 814963..815217,815263..815622,816849..817087, 817156..817338,817383..817516,817564..817688, 817735..817891,817950..818084,818146..>818148)) /gene="Cre-atx-2" /locus_tag="CRE_04810" /product="CRE-ATX-2 protein" /db_xref="WormBase:WBGene00055762" CDS complement(join(813152..813504,813553..813613, 813716..814039,814137..814442,814489..814916, 814963..815217,815263..815622,816849..817087, 817156..817338,817383..817516,817564..817688, 817735..817891,817950..818084,818146..818148)) /gene="Cre-atx-2" /locus_tag="CRE_04810" /note="contains similarity to Pfam domains PF06741 (LsmAD domain), PF07145 (Ataxin-2 C-terminal region); contains similarity to Interpro domains IPR009818 (Ataxin-2, C-terminal), IPR009604 (Ataxin-2, N-terminal); coded for by the following C. remanei cDNAs: DY527201" /codon_start=1 /product="CRE-ATX-2 protein" /protein_id="EFO86643.1" /db_xref="InterPro:IPR009604" /db_xref="InterPro:IPR009818" /db_xref="PFAM:PF06741" /db_xref="PFAM:PF07145" /db_xref="WormBase:CRE04810" /db_xref="WormBase:WBGene00055762" /translation="MSSQTGLGAVNGDVLCAINDMIGRVILVSTTDKKRYSGVLDAVS KDLAFGLQCVVELTKENENNLLRTESEVVEKMMFNFEDIVDFAYVTQEDTKNHLVSKF VTDRQYHGDAPNDNEELQEWNGGEDEDGLGGSIEDDVVTTGSQSSRRNNHNNGNGWSV NEMFAVNEKMNVVSTFKEDLTQYTTVEVVGSEEDRARAERLAREIESNSSSKFMANLE NDDDERDLDKMTRQEDFDSGSNQRGGKRNNFNQPPQQRRNPNITPNGQPVNRRAEGLR GDRRNSGSSSANNSRYGPPTSVQNYQPQQGQKSGGSHNNRRQNEEYRDNDWQMAKGKG QNQGNDQSFRQQQKQMLDPRPSAKQPEGEKSQSSGSRVTVLKNWGNEFSIATKEQSPA PGSTPPAPQGNSGSAWNRGPPSSLVAKGTTTDSTPLATENEESSVPRTVPQKKEDSPS NIREGNNETDGHQEDGDNVSITDRSETSSVVTTKSSSFKFNINAPEFKPRPAAAATPT PTTPTGPVSQNMPQISQQFIPAASEYQQHPGMIQPVGPQGSPMGLPGGMVPHMPPGGV PQNQGQPIMMWQQNQQGYPQPHQFSAQQAAVPGVPGQMYGPAATNPITVNQMNQPTQQ IPTSTAGSAPTDGRQGNAHGRRQDGEYREAQPLFYPSYGQTGQMMPVQQQFYPQQYQG TMQQQQYPMKLIPQQGPQGSYPQRFQQQQPQQVYMVPQGQLPQQRYQGVAQQTHQFAG EQGAPQSHPNSQPTTPGPRGEINGQKVQQGPPQSQNGNNGMHREPEAGSNASLSGSAS SQSGQRSGSPQNIGVPPQQQHQQGPPPPHGPPPPHGGAQHAVPPHAAPPHVGPPQATM VGQPMQFMVMQAHHQMHPQMQNYYQQQQMYYPTMVVPQQMQIPQNQHGQQSLMGERAD TGYSQNNIFDYRTMPNYQPNQPHQQQQHQQMHPPHIPRQNSLPQQFGGNQGNVKFINC LSNSSSSFEGVNPSSQQAPPSAPPPPQQQQQQQGGPPREHQQQAQSPQ" gene <819362..>820980 /locus_tag="CRE_04600" /db_xref="WormBase:WBGene00055763" mRNA join(<819362..819553,819625..819940,819989..>820980) /locus_tag="CRE_04600" /product="hypothetical protein" /db_xref="WormBase:CRE04600" /db_xref="WormBase:WBGene00055763" CDS join(819362..819553,819625..819940,819989..820980) /locus_tag="CRE_04600" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86888.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CRE04600" /db_xref="WormBase:WBGene00055763" /translation="MTNRPSKSNTKNSTRGKQNNDETSRHPKKSKHPKKVREVKQEQE QSSAMSIKAVKKGKKVSNAQQSVDGLGGGVTKPVHAKKEKNLTISDDEAPTAGTATST LSTVSTAGSSDVPPQTPPRKELGSIRKTKGNHGNEHIPSSIKHHATTPTTQDKWVGEA AARSWIEKADFEKAKADYAKIQSIGVNVEKECKIWKSNSKWNQSEEYPTLDSNLVKVD NEYVNMAQLDTPFGKNVFLGQFPVKNSEEAFWKAVFDKRATNIHIIVGNESFDFFPQK AEDYRNYGNMWINNRKVTQIHGNDDVCRYHIEVLPRDCSNSIVCVLDVIKNWNFENVP VKYAVAIKQTIELTNFFSNASSDESALIMSQHGAGRAGFLLALTVAVNKLDSKTEPCI ADIVKSIRVQRPKAVESLTQYAGLYTSLFYFIKVRPLRTPKFHINHFKKKLGKSDGLV KKSAELTQQFTNALNAEINQPSVIGSVASTVTNTNNGSAVLSLAISGQK" gene <824060..>831776 /locus_tag="CRE_04601" /db_xref="WormBase:WBGene00055764" mRNA join(<824060..824167,826029..826169,826219..826434, 826729..827150,827181..827571,827623..827717, 827996..828068,828118..828175,828340..828411, 829135..829284,829331..829751,829799..829979, 830026..830109,830173..830321,830402..830619, 830669..830850,830898..831052,831102..831525, 831576..>831776) /locus_tag="CRE_04601" /product="hypothetical protein" /db_xref="WormBase:CRE04601" /db_xref="WormBase:WBGene00055764" CDS join(824060..824167,826029..826169,826219..826434, 826729..827150,827181..827571,827623..827717, 827996..828068,828118..828175,828340..828411, 829135..829284,829331..829751,829799..829979, 830026..830109,830173..830321,830402..830619, 830669..830850,830898..831052,831102..831525, 831576..831776) /locus_tag="CRE_04601" /note="contains similarity to Pfam domain PF02460 Patched family; contains similarity to Interpro domains IPR003392 (Patched), IPR000731 (Sterol-sensing 5TM box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86909.1" /db_xref="InterPro:IPR000731" /db_xref="InterPro:IPR003392" /db_xref="PFAM:PF02460" /db_xref="WormBase:CRE04601" /db_xref="WormBase:WBGene00055764" /translation="MSSYFGASGALGPDHVSRQSPAAIRFQRKTSTGSAPSVPPPSVP PPEGSTDEEEPRTSSNNNYSSTSTVAAPVREPTRVSTLKREEKEKKQKERMEKERREL EEKRVKEDEMKKEENNLNTTTHPTLGERTSYVEEPPSTTTTLDRRDRKAEKALVRRIT NEMQMATYVQQIDLSTVKQPVGAYTQGVYRIRAFRFAEAIFRRTFWTLGKFIANQKMF SILVALFCLASSFILPSIHREQIYIDLPFNHLLGSDSDVISNGIGITTKNQEFNSSNP AFSCMKWRDNNRFAVLLKTINVFRTSRDTILRKDAVLAYTALKKKLDHFPVEKREFMN QCSLECETDKDMVDRIIKKSPQVALTYPETFVSMSKDSTNLTRVYLGASIGGVETDTD GAISKASSLLMNFELKNDLTGKEHNSWHRHFEEQTRLTTAPNISLMSWSPETFKDAVV SSLKDQYWCLQFCLIILFVFCLICSFGANAYKSKPCLGIMIFITISAVSITGFSMQFY RNLPVDPLVYPICFVTIGIGLLWLFQLHLSWSRYSSAAVHPTEKIAFILAHDAPGIAA SAVVIVLTFLAMGAAIQNGHMVSSFLGIASSVAILLVFTVWFVSFLLIFFICFLYFSF ISVFVFIGGSREARGVKWYQIFKTGDTHFTAPQLASFDSASLFSLHDRLLDSRPCASR AIGAFVISPKIRYPILVLCTAYVFFAIYGFYNTGIDIKEEYFLPSGSSEKTFIEQYRE QFGKTTQFIELTIESNIEYHDHNVQNNIFDIMDFAIAEGYATRAVNWLAEFAKFEKAS IYDVNPDTFVPVVNLVFLPSETYRKYTSDIVMDRFQTQIIKSRMYLELTAKGFSERAA FVDTILKKAATKGIPLSVDIPSSMSLRHDISVCTSGMVAFGVAILMLFILSLLLLGQP ALTVLLLVTSIAVLVETVGYAYFWSVPMNIVTLTMALAGNALTCVIVMAFCYSYSMSG KSQIRAGVRIQYTFQATLVPVLLACIVPVITFLPLLYVDVPVVYHLCKIIVLNAAASL INYLFFLPNLMVAFSERFGFSCTSLNCAELCCDMDDESSIYYIPTGGRAIHPEGLYHH PSYTYTVPKPLMNAPPPHYLAIAAPPVNSIYGQTEYSSRGELKRESRRHRRHSESGAS ETDGTPRRDRESRRRRQRRAVSRDSEIYEDLPSPRVVTSSRSTSPRRQQPGSMRRQNH PSGSSNPRPQAFHYDEGAQWRPYVQPSPYMFYPGPVYGQQRR" gene complement(<832202..>833386) /gene="Cre-rab-33" /locus_tag="CRE_04811" /db_xref="WormBase:WBGene00055765" mRNA complement(join(<832202..832426,832475..832546, 832613..832685,832738..832985,833029..833238, 833285..>833386)) /gene="Cre-rab-33" /locus_tag="CRE_04811" /product="CRE-RAB-33 protein" /db_xref="WormBase:WBGene00055765" CDS complement(join(832202..832426,832475..832546, 832613..832685,832738..832985,833029..833238, 833285..833386)) /gene="Cre-rab-33" /locus_tag="CRE_04811" /note="contains similarity to Pfam domain PF00071 Ras family; contains similarity to Interpro domains IPR002041 (Ran GTPase), IPR003577 (Ras small GTPase, Ras type), IPR003578 (Ras small GTPase, Rho type), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR013753 (Ras)" /codon_start=1 /product="CRE-RAB-33 protein" /protein_id="EFO86746.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR002041" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR013753" /db_xref="PFAM:PF00071" /db_xref="WormBase:CRE04811" /db_xref="WormBase:WBGene00055765" /translation="MSEHHVNLPAPQFSTYATVIDPPKQVTATHPDEMVTPTQSTQNP PSQDVSHTVSSTPVRVPYPSAPPAASSVPPPVPTPSASIPKKMALAPPSNKTYKLKRT FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAG QERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVSDSEVPRILIG NKCDVECQNRVSTDEAQMFADRNNMALFETSAKAASEADHVESIFLTLLHKLQQSKPM HVQSQDERQQKEQERLILKANETGNVEEEGFCC" gene complement(<833573..>834820) /gene="Cre-taf-11.3" /locus_tag="CRE_04812" /db_xref="WormBase:WBGene00055766" mRNA complement(join(<833573..833725,833775..833874, 833933..834048,834091..834324,834370..834504, 834551..834644,834696..>834820)) /gene="Cre-taf-11.3" /locus_tag="CRE_04812" /product="CRE-TAF-11.3 protein" /db_xref="WormBase:WBGene00055766" CDS complement(join(833573..833725,833775..833874, 833933..834048,834091..834324,834370..834504, 834551..834644,834696..834820)) /gene="Cre-taf-11.3" /locus_tag="CRE_04812" /note="contains similarity to Pfam domain PF04719 hTAFII28-like protein conserved region; contains similarity to Interpro domains IPR006809 (TAFII28-like protein), IPR009072 (Histone-fold); coded for by the following C. remanei cDNAs: DY529014" /codon_start=1 /product="CRE-TAF-11.3 protein" /protein_id="EFO86789.1" /db_xref="InterPro:IPR006809" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF04719" /db_xref="WormBase:CRE04812" /db_xref="WormBase:WBGene00055766" /translation="MTSKLSSADLFGGLSDSDSSDNEDRIENERASATVFQDLEMSSE EELGHEDTQPMELSPSPESISLEEYRYNRNESNRSENGYSTSFLSASTSSSHSSYYEH TGIPNTSIEMIGENAENSVDNQDRRNIEDPIPDSTEEIKVEESAIPPPIHQIQVQRHE ALQKANAPSHFMMSKPSDSFTQRKFPTRNNSSLTDEELEEKLLAEKIKEQEILSDIVL IANFSTEQLDRYAAFRRSKFNKPAVKNIIAQATGSAVSDPLALAVGGLAKLFVGELVE EAVELRDASNEENRPVQPHHIIAAFNKLNQDGKLWPPYGKKF" gene <835379..>835868 /locus_tag="CRE_04602" /db_xref="WormBase:WBGene00055767" mRNA join(<835379..835469,835654..>835868) /locus_tag="CRE_04602" /product="hypothetical protein" /db_xref="WormBase:CRE04602" /db_xref="WormBase:WBGene00055767" CDS join(835379..835469,835654..835868) /locus_tag="CRE_04602" /note="contains similarity to Pfam domain PF09138 Urm1 (Ubiquitin related modifier); contains similarity to Interpro domain IPR015221 (Ubiquitin related modifier 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86793.1" /db_xref="InterPro:IPR015221" /db_xref="PFAM:PF09138" /db_xref="WormBase:CRE04602" /db_xref="WormBase:WBGene00055767" /translation="MSSTIPVTIDFSGGAEFLVKAKVQKVQIPEESTLRDVLKFVRDN LVTDVHRINMLLNDDASEVAHGVITLINDTDTGLLSEYDTVIEAGDTITFVSTLHGG" gene complement(<836184..>837211) /locus_tag="CRE_04813" /db_xref="WormBase:WBGene00055768" mRNA complement(join(<836184..836294,836343..836473, 836518..836803,836853..836956,837004..>837211)) /locus_tag="CRE_04813" /product="hypothetical protein" /db_xref="WormBase:CRE04813" /db_xref="WormBase:WBGene00055768" CDS complement(join(836184..836294,836343..836473, 836518..836803,836853..836956,837004..837211)) /locus_tag="CRE_04813" /note="contains similarity to Pfam domain PF02932 Neurotransmitter-gated ion-channel transmembrane region; contains similarity to Interpro domains IPR006028 (Gamma-aminobutyric acid A receptor), IPR006201 (Neurotransmitter-gated ion-channel), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86905.1" /db_xref="InterPro:IPR006028" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="PFAM:PF02932" /db_xref="WormBase:CRE04813" /db_xref="WormBase:WBGene00055768" /translation="MLPRVCRGGNQSINQDNSDAYSTAEIEYNWCTSKEPNCATAVKA DENIELSSYQFTKICQKRTLASTSSGTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVL SWISFWINRDSAPSRTLIGTMTVLTETHLMTGTNRRLPPVAYVKAVDVFLGFCYLLVI LALIEYACVAYSKKKNEDRRRREKKMEHKPAPPTPDILHDVRLAECTCNAAPTSIIAV IKQPNRFCVSHSHIDIVSRAAFPLVFIVFNIVFWLMLLYKSKRLPYISEHEGDRCEAP DLH" gene complement(<837714..>844991) /gene="Cre-unc-49" /locus_tag="CRE_04814" /db_xref="WormBase:WBGene00055771" mRNA complement(join(<837714..837956,838053..838175, 838230..838265,838601..838760,838857..839333, 839673..839739,839790..839868,839916..840072, 840128..840227,840921..840969,841016..841215, 841268..841399,842118..842200,842792..843033, 843713..843788,843836..843922,844918..>844991)) /gene="Cre-unc-49" /locus_tag="CRE_04814" /product="CRE-UNC-49 protein" /db_xref="WormBase:WBGene00055771" CDS complement(join(837714..837956,838053..838175, 838230..838265,838601..838760,838857..839333, 839673..839739,839790..839868,839916..840072, 840128..840227,840921..840969,841016..841215, 841268..841399,842118..842200,842792..843033, 843713..843788,843836..843922,844918..844991)) /gene="Cre-unc-49" /locus_tag="CRE_04814" /note="contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region) (2)contains similarity to Interpro domains IPR006028 (Gamma-aminobutyric acid A receptor), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region)" /codon_start=1 /product="CRE-UNC-49 protein" /protein_id="EFO86636.1" /db_xref="InterPro:IPR006028" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="PFAM:PF02931" /db_xref="PFAM:PF02932" /db_xref="WormBase:CRE04814" /db_xref="WormBase:WBGene00055771" /translation="MARPFIFVILLSAQLCLHVVLCQDEDSHINTSLLSTVLDRLTNR TTYDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFYMRQTWQDPRLAFGSLD LGLSKEIDSLTVGVDYLDKLWKPDTFFPNEKKSFFHLATTHNSFLRIDSDGTVYTSQR LTVTATCPMDLKLFPMDSQHCKLEIESYGYSILDIVYVSHEKKSVSTESYELPQFVLQ SIKVVNQTQKLSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDAT PARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYI SKRMKLVRARKESRMLTPLPHLEPPPKRTVSVPSYFNNTTYRPFYSSTDRTSNLYIPE SQRTIIFANEDAVPNELTPMLGRSNSQASVFLYQTAIIPDDDFGRFWRWLRPSNIDKK NGFPDGYQTKDIDYYWGKKRTDLETTAVKFDTFQLPQFQPTLYFVNTTKAETSSGGIS ICYEDSTCSKSQFPGKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREA SPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLLEYAIVSY MNKRLVLRREKRRKAAEQQQRNEMPMFNASPKAANNNADLYFAGHNSSMNPLMEIPEN CDCRTIPMMQHPRLVTDGAHTLWPAPFARPKKASKTCCQRWTPAKIDKLSRYCFPLSF SIFNGLSFFSILHHLNYCFFHFSSLLVVHEISKSKLLGQNPGKRQMAAHPLVNS" gene complement(<852208..>854684) /locus_tag="CRE_04815" /db_xref="WormBase:WBGene00055773" mRNA complement(join(<852208..852311,852356..852453, 852500..852826,852873..853008,853043..853328, 853374..853574,853624..853809,853854..854090, 854135..854348,854394..854491,854537..854598, 854645..>854684)) /locus_tag="CRE_04815" /product="hypothetical protein" /db_xref="WormBase:CRE04815" /db_xref="WormBase:WBGene00055773" CDS complement(join(852208..852311,852356..852453, 852500..852826,852873..853008,853043..853328, 853374..853574,853624..853809,853854..854090, 854135..854348,854394..854491,854537..854598, 854645..854684)) /locus_tag="CRE_04815" /note="contains similarity to Pfam domain PF00995 Sec1 family; contains similarity to Interpro domain IPR001619 (Sec1-like protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86733.1" /db_xref="InterPro:IPR001619" /db_xref="PFAM:PF00995" /db_xref="WormBase:CRE04815" /db_xref="WormBase:WBGene00055773" /translation="MPVELESIRTRQIVALRTMINLNESVVSSGVKEPVWKILILDKT GQDIISPLLPVKQLRDLGVTLHLMLGNRREPLTDVPAVYFVSPTDENIDLMSEDLKKA MYDSFFCNFISPLARPRLESLASAAVHGGAVSQVQKVVDQYLNFISLEDDLFVLHRYN ENSLFSYYSMNSPGTSDVAVNSMLESIADGLFAVCATMGIVPIIRCPKGNAAEMVAKK LDQKLRDNLRDSRNNLFTMDGVRMGHMQTTRPLLVIGDRGADLATMLHHTWTYQALMH DVLELDQNRVTINNVTAGKKKEYDMGTGGTDKLWNNHKGSAFPTVAEAVQEDLDAYRS SEEEIKRLKQAMGMSGENDAADEAMTSLLADTTAKLGSTVTSLPQLLEAKRLIDLHTN VATTLLDVIKERKLDVLFELEQKLLQHSQLGIHYISTSTCLYFQNLRSAKDVLRVLII AFLCQDTVSQNSYDQMMNLLRERGIEESALKHVQKLKSISQLGSRAANSTHTEEHQGA GTKTISMFGKLLSHSSKFVMEGVKNLVPKEHNLPLTKMIDSLNTPPSSTGISSAVGIN QMIGGSSQAPDIDDTYCFFDPKLMHQPTKETITSARQQPAQDIVLFVVGGGNYVEYQN LVDYGKRKNLMRVTYGCTELVNPSQFCDQVRPRILPFL" gene <855163..>855691 /gene="Cre-sip-1" /locus_tag="CRE_04603" /db_xref="WormBase:WBGene00055774" mRNA join(<855163..855437,855484..>855691) /gene="Cre-sip-1" /locus_tag="CRE_04603" /product="CRE-SIP-1 protein" /db_xref="WormBase:WBGene00055774" CDS join(855163..855437,855484..855691) /gene="Cre-sip-1" /locus_tag="CRE_04603" /note="contains similarity to Pfam domain PF00011 Hsp20/alpha crystallin family; contains similarity to Interpro domains IPR002068 (Heat shock protein Hsp20), IPR001436 (Alpha crystallin/Heat shock protein); coded for by the following C. remanei cDNAs: DR406669, DR780188, DR778429, DR777642, DT934562, DT937292, DR781558, DR781346, DR406860, DR775672, DR406881, DR776321, DR776110, DR776910, DR777432, DY529506, DR780030, DR406782, DR776839, DR778707, DR406210, DT935263, DT936895, DR406832, DT936190, DR776385, DR406743" /codon_start=1 /product="CRE-SIP-1 protein" /protein_id="EFO86693.1" /db_xref="InterPro:IPR001436" /db_xref="InterPro:IPR002068" /db_xref="PFAM:PF00011" /db_xref="WormBase:CRE04603" /db_xref="WormBase:WBGene00055774" /translation="MSICPYTGRPMGLLRDFEPMMPYWAQRMSMLNDFNNIVPQQHNE VENTDNKFAVKLDVAAFKPEELKVNLEGNVLTIEGHHEVKTEHGFSKRSFTRQFHLPK NVDLAHIHTAINKDGQMTIDVPKTGSNSSVRAIPIHVSAGHAVTQKPANNTNNTTGKH " gap 862231..862240 /estimated_length=10 gene <864772..>865591 /locus_tag="CRE_04604" /db_xref="WormBase:WBGene00055775" mRNA join(<864772..865135,865195..865267,865558..>865591) /locus_tag="CRE_04604" /product="hypothetical protein" /db_xref="WormBase:CRE04604" /db_xref="WormBase:WBGene00055775" CDS join(864772..865135,865195..865267,865558..865591) /locus_tag="CRE_04604" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86616.1" /db_xref="WormBase:CRE04604" /db_xref="WormBase:WBGene00055775" /translation="MLLISLFSLFSIGFGARILRRELDDQPTALFLELGPLEVVSTSP SDDDVFMIRDSSPSFPTADSFRDKRGVDPMSIPRLIKEPPLKKRSGDFKRGDVVYPSA AKQTVPLVRVREPPLKRGQLFLEELLQFNDDAHKRFMNPLRRIRYGSNRHIYAW" gene complement(<866204..>867715) /gene="Cre-hpd-1" /locus_tag="CRE_04816" /db_xref="WormBase:WBGene00055776" mRNA complement(join(<866204..866974,867262..867582, 867626..>867715)) /gene="Cre-hpd-1" /locus_tag="CRE_04816" /product="CRE-HPD-1 protein" /db_xref="WormBase:WBGene00055776" CDS complement(join(866204..866974,867262..867582, 867626..867715)) /gene="Cre-hpd-1" /locus_tag="CRE_04816" /note="contains similarity to Pfam domain PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; contains similarity to Interpro domains IPR005956 (4-hydroxyphenylpyruvate dioxygenase), IPR004360 (Glyoxalase/bleomycin resistance protein/dioxygenase); coded for by the following C. remanei cDNAs: DT935288, DY529355, DT936461, DT937334, DR781274" /codon_start=1 /product="CRE-HPD-1 protein" /protein_id="EFO86670.1" /db_xref="InterPro:IPR004360" /db_xref="InterPro:IPR005956" /db_xref="PFAM:PF00903" /db_xref="WormBase:CRE04816" /db_xref="WormBase:WBGene00055776" /translation="MSTFDKGEKPDIGTFVAFDHVRFVVGNAKQAAYWYCANFGFEPF VYKGLETGSRITAQHAVRQDKIVFVFESALLPDNSELGNHLVQHGDGVKDVCFEVEDL DSIVAHAKTAGATIVHDITEESDEDGTVRFATLRTYGETNHTLLERKNYKGAFLPGFK PHPMPRNFFQTLPRVGLNFLDHCVGNQPDLQMDSAVEWYENILKFHRFWSVDDSMIHT EYSALRSIVVTNFEETIKMPINEPASSGKKAVSQIQEFVDYYGGSGVQHIALNTTDII TAIEALRARGCEFLSIPSSYYDNLRQRLAASSMTIKEDMDRLQKLHILVDFDENGYLL QIFSKPCQDRPTLFLEIIQRKNHQGFGAGNFKALFESIELEQTKRGNLFYDNVKDGEK K" gene <869354..>869890 /locus_tag="CRE_04605" /db_xref="WormBase:WBGene00055777" mRNA <869354..>869890 /locus_tag="CRE_04605" /product="hypothetical protein" /db_xref="WormBase:CRE04605" /db_xref="WormBase:WBGene00055777" CDS 869354..869890 /locus_tag="CRE_04605" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein); coded for by the following C. remanei cDNAs: DR776882" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86794.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CRE04605" /db_xref="WormBase:WBGene00055777" /translation="MPLPNKGGEPEFKLKVEPADMIIIKYKMKSESHVPLNITNPTKD RVCYKVKCTDNEIFRVRPPLGFVKPGETASVTITLKPKSGIDPNRHFFAIYHVACVDK TDPKKIWNANTKPDGVIRMQVQLECDEKEKNEEKDKKDEKKEEKKDEKKDEKKDEKKD EKKDEKKEDEENKEEKKE" gene <870628..>876798 /locus_tag="CRE_04606" /db_xref="WormBase:WBGene00055778" mRNA join(<870628..870850,870900..871253,871335..872257, 872377..872990,873587..874439,874506..875468, 875519..876361,876409..>876798) /locus_tag="CRE_04606" /product="hypothetical protein" /db_xref="WormBase:CRE04606" /db_xref="WormBase:WBGene00055778" CDS join(870628..870850,870900..871253,871335..872257, 872377..872990,873587..874439,874506..875468, 875519..876361,876409..876798) /locus_tag="CRE_04606" /note="contains similarity to Dictyostelium discoideum Putative uncharacterized protein.; TR:Q54H40; coded for by the following C. remanei cDNAs: DY524817, DR777677, DY527128" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86709.1" /db_xref="WormBase:CRE04606" /db_xref="WormBase:WBGene00055778" /translation="METSSIFKPYLSYDTLHGDKQTMLKNSIGRQLPYIINFKENSCQ VFDIELERITHIFTFPDSCHLVVVDYFPTADGQFGIIVGIEDKLKTWGSENFVVALAV TENSPRMVITHSIDVPDRITVIKTLFSNVDMAEGKEKRSLQLYHRLLSWPHVIAIGCK GTKCFLSSLQKTDESQEVPAINTPKKPLLDLLACYVENDNLRYSNEDGTFREYTSSGV YVSALALMPRSRTLLVGLSMGGILAATLNASNQMNLIELRHERLIHAIAPLEPEDDPD KFEYFIAAVDRDPRHSIMIQLWRGSFKSSEEVNDDEKYDRPQYNVCLEHKIPYGERWL SVKTIVTERGVMDGVVQRRRNDSSMDSTVLNVTQSFGCTSDRSNVFLAYERRKPEVIN PEETMYIVEAAIFDIDAWYYKRVPGRVTTDGLSLRQSPFMSCIRSDINSSQVSDIGIL TLDSMDISRFTSKISDADQLFYPSSVSYDRVFVVHNTHIDWMKIQNIQETILQRCASK LSWIVRSPDSMATNIIAAGLIRKNILTGSPNTSVAEINDDDQKLPMKLRVVLNAMMYY GKINEFTGLISQNDLSDKIKLEIADWAFFEAVDYKRIISDRTVALFQGSTSALAPLAE DTIYQGIKLFRIVNEYLKGCCKYVSNRAYLQNLALSVKCMFNHTKLMSRFINVLIVPI SRHDQTIMRRMHEDRKSAASKNKTALPVQLAVRNMHRISPDAQFWNDLPYDDWYPPTP LDLLESILNISISERIKREVVIQYILDWLRANPNKSELSDVKLAVEVIQVMTNQMLDV DLEKILYVLDQEKTALTRKANVTPTDDRNKKHVFSLEIEELTYDQLWSGEAHLASTIN SRDLERFQQRLKLEEDKEKGKLPIFDSETEKLYQVFLFEKQKYRLMSSEAYQSHNLLN SFLPTMLNKTSIEPVQKSSKELSIEKSVKEMFEKHSQKEIEAMPQMFAKFDKNNVKKR KSDAREFNSSPISFVPPTAKRIQQKTKDEEDVPEGIDTEKLESVNEENLNRMIATPAR YYKRPVETVNYTSPSDTQKMPFVPQQNSILKTAKTVQSPSRGRIRFDASVRKGANESI DSIVAEENEMENAPKKINFAILEDAEEEETRIVRKSRSNSTAQETEKVAEVQFEVLEE HQDVTFELQDDDDNQMSLNNGETFESISAAENLQTLSEVNDPEKIPEVPLQNGTVEVV EQEYEEHLWDGVHRSFEAQNEDDCGSYRVKKLKNVTNEAEIQIEAENDPAVDVPLDRT FEAQEEEETGPLGDTGGAEASYKPVYIYTVKSAEPSQTPMTEEDRPPSANTRSRKKET NSRSATPVENENEAEKKKVRKPLAASVKTTSETRDSKKTDEESIPKNEDGQKISKPFG IDDKERPSSRKTRGVRVEKTVEFQEDERHEDENVVVVARKTRGVAVQQSSTPDEIVDN QLPSSSRTRVVSEKRNRIAVKKEEKKPVPTPRTRSSSASRSTQTELNVDSSKDDVESS TPVITGRITRSRTNSRCQTPSRKEEVDKQVSPTRKDESSVANSKIRAASVVPKNTPAA VSSKKTTRVSVSAPSTPRRGRSATMSESEEPVATNRGSTKRRNPTPDDTSREDVVKKT RGCARTPLLKVIPESTGDEQDKPTDTPKRGRSRTNSVSSSATTSRSVPTTPKRGRKAA SVAPTLEEVVEEHEPVVRSKFNCAFLIRFYFRLQLDDRHVVSNRSRDDLIIQ" gene complement(<877145..>879479) /locus_tag="CRE_04817" /db_xref="WormBase:WBGene00055779" mRNA complement(join(<877145..877272,877318..877536, 877583..877746,877794..877872,877925..878036, 878089..878361,878565..878715,878760..879009, 879470..>879479)) /locus_tag="CRE_04817" /product="hypothetical protein" /db_xref="WormBase:CRE04817" /db_xref="WormBase:WBGene00055779" CDS complement(join(877145..877272,877318..877536, 877583..877746,877794..877872,877925..878036, 878089..878361,878565..878715,878760..879009, 879470..879479)) /locus_tag="CRE_04817" /note="contains similarity to Saccharomyces cerevisiae Putative positive regulator of mannosylphosphate transferase (Mnn6p), involved in mannosylphosphorylation of N-linked oligosaccharides; expression increases in late-logarithmic and stationary growth phases; SGD:YKL201C" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86575.1" /db_xref="WormBase:CRE04817" /db_xref="WormBase:WBGene00055779" /translation="MFMRLENNRKYDSKTTARCKRSDDQLNRSVKSKKMSAKSSKKSK KSKKEMTKSKKSDRSKSSKKEKMEKSDRKLDKKKSSIREKVEEPKSQKEEEEFVNEEK PKPFQKVKRPWKNLFKLKRKRARKDVHVSERNGTWCHLFAMGHDIHATTVFFRRVSVR MGLLTGTVICLVFYICTVFRDSHIRYFRKIPDLRRLLTNEKLVHQAELFRHNWCLEVE DKEERLDILERNRLFDTSLLDSNIDEPGTIRAVSQNTTRSEDAEGETEELLGLLPRDK LASFPYPVKMKFQLYLLLIFIFPVIWLILLFELTLHTTGHNTRHLFSEDNFGFAWMYE VLRAHRELMNVKEERHKCMGTMKEMKSGLSSSVMTIMKVFVWERSLGSSIIPIVISII SLGILLDLALQGLFSCRLNHREVNNDGKRYIFFYNVAIKFFISFFVFSIFLAITLMTE KYFFKPDRRDN" gene complement(<879807..>881439) /locus_tag="CRE_04818" /db_xref="WormBase:WBGene00055780" mRNA complement(join(<879807..880227,880272..880594, 880640..880742,880784..880913,881412..>881439)) /locus_tag="CRE_04818" /product="hypothetical protein" /db_xref="WormBase:CRE04818" /db_xref="WormBase:WBGene00055780" CDS complement(join(879807..880227,880272..880594, 880640..880742,880784..880913,881412..881439)) /locus_tag="CRE_04818" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86910.1" /db_xref="WormBase:CRE04818" /db_xref="WormBase:WBGene00055780" /translation="MAASDYIMDVETQRRIEYTRQKLMRIEQMNEQLRKLSKANKNSE EKLERLLKRKDSLELDVARLTDAAMRTEPDVGKELMHSIEEPLEVDMVYGEAYREKMC HLKVLLNEIIVRTSFNEKAMCKEIGHQEAEFENRLRETISTRTSLSLKTDEAQKKYEM LVREQANLYEDVQEMEGNIEKFDASRWLLNVEKRRVSDILDRTKREPKTGIDCRKPYI VCSEASSIEDLISSTASLTHDHYAPEHHFNQTVPAVNFKDVPSIDGYSTEMKVHKEGC PKNKKNSLHPIPHSNSLISEKETPIKQCRGKQQTKLPINGINLMELISKAIQEELSSL " gene <883073..>887229 /locus_tag="CRE_04607" /db_xref="WormBase:WBGene00055781" mRNA join(<883073..883456,886825..>887229) /locus_tag="CRE_04607" /product="hypothetical protein" /db_xref="WormBase:CRE04607" /db_xref="WormBase:WBGene00055781" CDS join(883073..883456,886825..887229) /locus_tag="CRE_04607" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86556.1" /db_xref="WormBase:CRE04607" /db_xref="WormBase:WBGene00055781" /translation="MSFDTLEGWILTQDSDIRHLMSLDSLEVWILTQDSDIRHLMSFD TLEGWILTQDSDIRHLMSLDSLEVWILTQDSDIRHLMSFDTLEVWILTQDSDIRHLMS FDTLEVWILTQDLTFPPYRHICPHRVNQYFISIIFVRIYITKNFEKYIFVLHIDRNLL LETEKVLEYNMYSRRYVHALSASLHVSVSRGDLRLLNFSVAIRVSSSIPPASIHSSDP LNQYCNEGQENREGSWRPTGHRKNCCCWWPRIPVREHLPLDVEN" gene <887512..>888547 /gene="Cre-rab-30" /locus_tag="CRE_04608" /db_xref="WormBase:WBGene00055782" mRNA join(<887512..887598,887650..887733,887780..887841, 887892..888013,888072..888136,888187..888302, 888439..>888547) /gene="Cre-rab-30" /locus_tag="CRE_04608" /product="CRE-RAB-30 protein" /db_xref="WormBase:WBGene00055782" CDS join(887512..887598,887650..887733,887780..887841, 887892..888013,888072..888136,888187..888302, 888439..888547) /gene="Cre-rab-30" /locus_tag="CRE_04608" /note="contains similarity to Pfam domain PF00071 Ras family; contains similarity to Interpro domains IPR002041 (Ran GTPase), IPR003577 (Ras small GTPase, Ras type), IPR003578 (Ras small GTPase, Rho type), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR006688 (ADP-ribosylation factor), IPR013753 (Ras); coded for by the following C. remanei cDNAs: DR409712, DR407429" /codon_start=1 /product="CRE-RAB-30 protein" /protein_id="EFO86906.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR002041" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006688" /db_xref="InterPro:IPR013753" /db_xref="PFAM:PF00071" /db_xref="WormBase:CRE04608" /db_xref="WormBase:WBGene00055782" /translation="MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDF MIKTVKVGNDKIKLQIWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWL GEIESYANRRVLKILVGNKVDKGDEREVPERIGSDFSDVNHFDYFLETSALDATNVDQ LFEQVATRLTNDMKITDERVHQYRADATNTSSSGGPIKLIDRAQTQLNSCCSRQ" gene <889078..>891285 /gene="Cre-acdh-11" /locus_tag="CRE_04609" /db_xref="WormBase:WBGene00055783" mRNA join(<889078..889103,889151..889264,889336..889735, 889767..889937,889985..890440,890476..890881, 890936..>891285) /gene="Cre-acdh-11" /locus_tag="CRE_04609" /product="CRE-ACDH-11 protein" /db_xref="WormBase:WBGene00055783" CDS join(889078..889103,889151..889264,889336..889735, 889767..889937,889985..890440,890476..890881, 890936..891285) /gene="Cre-acdh-11" /locus_tag="CRE_04609" /note="contains similarity to Pfam domains PF02770 (Acyl-CoA dehydrogenase, middle domain), PF00441 (Acyl-CoA dehydrogenase, C-terminal domain); contains similarity to Interpro domains IPR006090 (Acyl-CoA oxidase/dehydrogenase, type 1), IPR006091 (Acyl-CoA dehydrogenase/oxidase, central region), IPR013764 (Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal); coded for by the following C. remanei cDNAs: DR406259" /codon_start=1 /product="CRE-ACDH-11 protein" /protein_id="EFO86630.1" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR013764" /db_xref="PFAM:PF00441" /db_xref="PFAM:PF02770" /db_xref="WormBase:CRE04609" /db_xref="WormBase:WBGene00055783" /translation="MHRINHVVRMASSSSTNATIAARHTQYSHAKTGGFSQEAPTLHN PYRDDPILDRVLRRLLPESQYVKVSADLTKFGDRITSEIEHLGRQAELEQPRLEHQDA WGKRIDKLVVCNEWQKLKQICAEEGVISIGYENDVDPFVRRIHQVAKLFLFSPSAGLV SCPMAMTDGAVKTLTVGILYSLNLYGKHKLATEAVDRLRSRDPTSAWTSGQWMTEKKG GSDVAGGCDTYAVQIENDTYRLNGYKWFSSAIDADVALTLARIVDSDGNAVEGSRGLS LFLLRIRDDNGNLNGIQMVRLKNKLGTKQLPTAELLLDGAIAERIGEPGRGVAGISNM LNITRIHNAVASLGYMRRFPALFSFLFKCSFSRIISLARDYSTKRVVFGQTQVKYSKW PLHTTTLAKMEVETRGSMLLLFESARLLGLSEAGKSSDVDAMMLRLITPVLKLYAGKQ AVPLVSEGIECFGGQGYMEDTGLPTILRDAQVTPIWEGTTNVLSLDVLRVFSGKENIL LAFGKRVSQLLSNTKSEEPRLQKSKESIESALKELQKLLVKASDSAVQGETRIDTVAR HISFAIARIYSGALLIDHASDSTVANQSDIEVAYRYCCEQPLIDLRWEWFANERVKSD RAIVFDNYLGLQKSKI" gene complement(<891646..>893572) /locus_tag="CRE_04819" /db_xref="WormBase:WBGene00055784" mRNA complement(join(<891646..891778,892300..892380, 892427..892511,893428..>893572)) /locus_tag="CRE_04819" /product="hypothetical protein" /db_xref="WormBase:CRE04819" /db_xref="WormBase:WBGene00055784" CDS complement(join(891646..891778,892300..892380, 892427..892511,893428..893572)) /locus_tag="CRE_04819" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86611.1" /db_xref="WormBase:CRE04819" /db_xref="WormBase:WBGene00055784" /translation="MHSSEYILALSAILLLTTVSHVAAVRCKCTKESETVTCTDGVCE TENGSCLMLDHPTMGVHYTCHTRGLKDGSCHNKTSKSGAEVRICGCNSQDFCNFSMWP DKSAHHHHKHHHKHHEQTQEETINSVSSLSPVFSLFVSSIFYFLL" gene complement(<900149..>904083) /locus_tag="CRE_04820" /db_xref="WormBase:WBGene00055787" mRNA complement(join(<900149..900245,900295..900433, 900488..900701,900745..901004,901047..901448, 901637..901729,901778..901834,902130..902470, 902514..902674,902719..902833,903823..903936, 903980..>904083)) /locus_tag="CRE_04820" /product="hypothetical protein" /db_xref="WormBase:CRE04820" /db_xref="WormBase:WBGene00055787" CDS complement(join(900149..900245,900295..900433, 900488..900701,900745..901004,901047..901448, 901637..901729,901778..901834,902130..902470, 902514..902674,902719..902833,903823..903936, 903980..904083)) /locus_tag="CRE_04820" /note="contains similarity to Pfam domains PF08032 (RNA 2'-O ribose methyltransferase substrate binding), PF01549 (ShK domain-like) (4), PF00588 (SpoU rRNA Methylase family); contains similarity to Interpro domains IPR001537 (tRNA/rRNA methyltransferase, SpoU), IPR013123 (RNA 2-O ribose methyltransferase, substrate binding), IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86902.1" /db_xref="InterPro:IPR001537" /db_xref="InterPro:IPR003582" /db_xref="InterPro:IPR013123" /db_xref="PFAM:PF00588" /db_xref="PFAM:PF01549" /db_xref="PFAM:PF08032" /db_xref="WormBase:CRE04820" /db_xref="WormBase:WBGene00055787" /translation="MFSRTIQNYAEIKPNLLFRKAKMAKKSVEKYKAKKIEIPEIKGE ALFGLHAVLEAIRSGKRDFHSIYLKKAIEDSDTRIREILQIIQELGIKKESLTDDQLD RLTEYQLHNGICMDASPLNFSNFETKNFSIFVDRVLDPGNLGAIGRSAWYFGADGICL VKGRGPKTITPSMIKSSCGALEHLPVQQFENFHEFRDSIKLNSGELVATCDPLAAEKA GITVKSLNEWKPKKTVGIVLGDEGVGISKEILNFCDTVISIAPTREHQSSVTSLNVSV VAAVENNTTDEYCSNGVRAGNLCQLIPSSGYECSSFNSSASWCESFNGKYKCCEKSTI KCKDRSSFCRLTKKLCLNESDFGKMKAKCEATCGFCGFKTFEEVEKTRKRIDELARGQ ECDLPRKCVFPKEKMLNSTGTPSVNHGTTATIVDPIVACRSKLNWNSTTVGSAKNVTE YNNSTEFPMTSNETSNITTVDLKTLLQTVGKLTTSTTLRSSTTRSRIPKTIDSFDSNE KLKTFASRRHNETTTSITLPSSFNSTKVVRKLTLEELKTTRDTMPKITTAEPSSLSNS LSKTVIRGTCFDEYTYCREFTSLCSHPAFSEVMASHCSLTCDRCDDVERVEEGSEDCE DMTPDCKNYRDLCQHSKYKTLMKSYCPKVCGHCIPMCRDRHQNCPQFFDDGFCNDTMY TYDERKYLCGATCLLC" gene complement(<904250..>904897) /locus_tag="CRE_04821" /db_xref="WormBase:WBGene00055788" mRNA complement(join(<904250..904560,904604..904700, 904754..>904897)) /locus_tag="CRE_04821" /product="hypothetical protein" /db_xref="WormBase:CRE04821" /db_xref="WormBase:WBGene00055788" CDS complement(join(904250..904560,904604..904700, 904754..904897)) /locus_tag="CRE_04821" /note="contains similarity to Pfam domain PF06677 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); contains similarity to Interpro domain IPR009563 (Sjogrens syndrome scleroderma autoantigen 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86764.1" /db_xref="InterPro:IPR009563" /db_xref="PFAM:PF06677" /db_xref="WormBase:CRE04821" /db_xref="WormBase:WBGene00055788" /translation="MAPINGFHEDNDEAIRLRDSFRDEVSKRMGELLLKGQTMLDEYC PTCSGILMEDRTGVRRCVTCELFREKTSHIVAEIPLQEEDLQEAVDQSQARETASAEK TPATRKAIVPKAAPVVKKSKKIAENTHGNDYTDTIVSAKSAVMRKLEWATSQLDSTED TSRVFDFLTVIQKSAETLQALQL" gene complement(<905379..>906533) /locus_tag="CRE_04822" /db_xref="WormBase:WBGene00055789" mRNA complement(<905379..>906533) /locus_tag="CRE_04822" /product="hypothetical protein" /db_xref="WormBase:CRE04822" /db_xref="WormBase:WBGene00055789" CDS complement(905379..906533) /locus_tag="CRE_04822" /note="contains similarity to Interpro domain IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DT934002" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86695.1" /db_xref="InterPro:IPR015943" /db_xref="WormBase:CRE04822" /db_xref="WormBase:WBGene00055789" /translation="MSTISHAAITLEQSGFTTADRNGFQMYQLFPLHYRMHEHFGNFI DHFRFSNMFFSVPDVGPVRIAKQMGVSNKVCYVSMMNGKYSQNNVIVFNVETNSDETE ITTPSRYGAVTNIQVSHNRLAVFTATRLFVYQFPDNINQIRSEDIRPNPKGISAMSYD PTTSACYLAYPGFKTGSIQIMNLNTLTARESKSPVVIDAHVTEIVQVALNCQGTLVAS GSTKGTVIRVYDARTKGMLYELRRGSVHAHLQCLAFSPCSSYLAVASDKGTLHVFGIR DAEPQKRMTVLERNLGSSSILKIQLDRQVLALGFSKRESLKQNFMKIQKIISETAKSL TGLVAICSDASYWRYHFSKDVNGKVHSSPPFYEELLEFSADASFFRTPLD" gene <908339..>911379 /gene="Cre-rabx-5" /locus_tag="CRE_04610" /db_xref="WormBase:WBGene00055790" mRNA join(<908339..908407,908448..908563,908612..908712, 908822..908873,909996..910543,910596..910733, 910778..911030,911076..911157,911209..>911379) /gene="Cre-rabx-5" /locus_tag="CRE_04610" /product="CRE-RABX-5 protein" /db_xref="WormBase:WBGene00055790" CDS join(908339..908407,908448..908563,908612..908712, 908822..908873,909996..910543,910596..910733, 910778..911030,911076..911157,911209..911379) /gene="Cre-rabx-5" /locus_tag="CRE_04610" /note="contains similarity to Pfam domains PF02204 (Vacuolar sorting protein 9 (VPS9) domain), PF01754 (A20-like zinc finger); contains similarity to Interpro domains IPR013995 (Vacuolar sorting protein 9, subgroup), IPR003123 (Vacuolar sorting protein 9), IPR002653 (Zinc finger, A20-type)" /codon_start=1 /product="CRE-RABX-5 protein" /protein_id="EFO86547.1" /db_xref="InterPro:IPR002653" /db_xref="InterPro:IPR003123" /db_xref="InterPro:IPR013995" /db_xref="PFAM:PF01754" /db_xref="PFAM:PF02204" /db_xref="WormBase:CRE04610" /db_xref="WormBase:WBGene00055790" /translation="MSNKYGDEDESKKAKMHLKANDLLCVNGCGFYGTPQWENRCSKC WRAHQNELKKSQDFAKNKSLLSFDQFQERRKSTTESKSRGIKNLFKASPIPESGASSP TSTSPASTPTRRRDLSPDSLEARKHFTDFLVANLSTAMAQEIARSVKNAVTKICEMRM NPDEMSELVMSYYQYLGERIGGHSLFDSPDCKVKVEDVMDQVEKYISTCCYTTFFCAS HEEEVADVSLQDRIRSLHWVTAGFLETKLVFKKQTVRDKIDEGISELIEINAKKSAFE KLECLTRSCKAVFEALKESESSMSADEFLPTLIYILFRGNPPLIQSNVKFISRFAIPA RLMSGEAAYFFTNLSCALEFARNMNHESLQMEKAEFEAYTTGHLAPPLSVINSACNQA MYVLEGTIETITTVVKKAGGLASNLTGVHGKADDDLEKMLIVIKETVDFYPTEEYLKM KESIFGEEQETADLLVSLSRQSSESGRGTLSTSADSQPSTPQPQLEPSLESPLAAFSQ K" gene <911781..>912253 /locus_tag="CRE_04611" /db_xref="WormBase:WBGene00055791" mRNA join(<911781..912016,912073..>912253) /locus_tag="CRE_04611" /product="hypothetical protein" /db_xref="WormBase:CRE04611" /db_xref="WormBase:WBGene00055791" CDS join(911781..912016,912073..912253) /locus_tag="CRE_04611" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86673.1" /db_xref="WormBase:CRE04611" /db_xref="WormBase:WBGene00055791" /translation="MLLELILLGLVAYLLLAWHRKEVEKVSHFNKFINQTLKFKGGEG LGAAGPILEELENVVFKIIDIFKKQANSTSTSKRGSTKNTTPMFAEEASTQRSSPRIA QIEKFESVRQPREKSRSKHHSRHRSKMDSALKAAQK" gene <912345..>913336 /locus_tag="CRE_04612" /db_xref="WormBase:WBGene00055792" mRNA join(<912345..912929,912977..913103,913152..>913336) /locus_tag="CRE_04612" /product="hypothetical protein" /db_xref="WormBase:CRE04612" /db_xref="WormBase:WBGene00055792" CDS join(912345..912929,912977..913103,913152..913336) /locus_tag="CRE_04612" /note="contains similarity to Interpro domains IPR005727 (Ribosomal protein L22, bacterial-type), IPR001063 (Ribosomal protein L22/L17)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86854.1" /db_xref="InterPro:IPR001063" /db_xref="InterPro:IPR005727" /db_xref="WormBase:CRE04612" /db_xref="WormBase:WBGene00055792" /translation="MAVLIQLFFLNTVFIITSLSFIRMLRVLVRTGTESCRAVSTSSA AFSIPVKKDELSAKDVWERRSKLRIPKLQKDEQLSSKVYFAPEWDLEKKPNLDEGFVD PLKGYGMTPEKWEYYNKVNSKLSSTGGKNVGRFQVVWQPNYIVPETGLPKAKEVFHCK ESVHFSPKRMWAACQLVWKMNVDEAITQLDMQQLKACTLLMETLKKAKTRAANEFHIE YPSQMYVADAFPVQSNIVKGARRHAHDNWNTIRYRYIHIFVRLEEGPAPAQKQRHATK SGWDHMDAYYNYLRSRSVKYSI" gene complement(<913588..>914542) /locus_tag="CRE_04823" /db_xref="WormBase:WBGene00055793" mRNA complement(join(<913588..913767,913814..914148, 914485..>914542)) /locus_tag="CRE_04823" /product="hypothetical protein" /db_xref="WormBase:CRE04823" /db_xref="WormBase:WBGene00055793" CDS complement(join(913588..913767,913814..914148, 914485..914542)) /locus_tag="CRE_04823" /note="coded for by the following C. remanei cDNAs: DR780246" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86667.1" /db_xref="WormBase:CRE04823" /db_xref="WormBase:WBGene00055793" /translation="MTRTTRAALILVLLSCIASVSARTIPCLDGCTCELSEHDPVIRC DSVGLERFPLPHSSPLRGFHFLALTCNDIETIPAISMIKASFPDLQGIDVQGNTRLNC SDIAHLHTEIPVLSDCENEHPLQCDKLDKSCDWKCRALTKLKEMWAQFKDLVNRKAKE WQAEETIEAAKSWFSAQFKKFKVAIGELSD" gene <915008..>917467 /gene="Cre-hpr-9" /locus_tag="CRE_04613" /db_xref="WormBase:WBGene00055795" mRNA join(<915008..915151,915242..915368,915616..915686, 915736..915861,915910..916024,916097..916202, 916250..916487,916534..916701,916763..917022, 917070..917180,917227..>917467) /gene="Cre-hpr-9" /locus_tag="CRE_04613" /product="CRE-HPR-9 protein" /db_xref="WormBase:WBGene00055795" CDS join(915008..915151,915242..915368,915616..915686, 915736..915861,915910..916024,916097..916202, 916250..916487,916534..916701,916763..917022, 917070..917180,917227..917467) /gene="Cre-hpr-9" /locus_tag="CRE_04613" /note="contains similarity to Pfam domain PF04139 Rad9; contains similarity to Interpro domain IPR007268 (Rad9)" /codon_start=1 /product="CRE-HPR-9 protein" /protein_id="EFO86605.1" /db_xref="InterPro:IPR007268" /db_xref="PFAM:PF04139" /db_xref="WormBase:CRE04613" /db_xref="WormBase:WBGene00055795" /translation="MSSPVRKTGSLEGNKRIMHGFDDAAYRRVRKQQKYVGRKLFERS TLMLIDQMQATHETYADPSSSTSNFRKGIQHEDMKGAQFVVQSNLKIMSRSIAALSKI SEDVLIEVSDSGLYFKIVNRSKFCVFRFAPEFFNACDVSLINNNSVNICRLSMKSAQK IFKGVAFGEKNFVGCEFRIDPTAERMMVKLQMNYDIDRTIHANLREMGSILHKPTYDR STCRNTTVVFASTLLPILAQMKSDIEVTMNVTKDGLTIRNFHSMDGISMFNMSDQKGG KKVKTETTITADKLTRHKIQIPVEFSFSFKEFMAIVIFADQLGSEVCLYYDLPGRPFI LSIEAHPNFDIELALATMGNDDEIDLDGGIIKETLIHHEVLKSTQSSGSHKNSKRNSP LDEINISSSSSRSKRGPVPNIQDNHSQSPSQPSKNKFMSGQEKPTPPAADMSWRDHEI IDVVEQREPSPDDDVQPVEERNTPGEVLTDIMEIEEPAQMLGDNFSMRQEMSDFSQMN MSNPRDAAQNELKKQTKIEREKERGSTIYLASDEYNERNEMFKIPEPKRRKVDDNRNT TV" gene complement(<917670..>918634) /locus_tag="CRE_04824" /db_xref="WormBase:WBGene00055796" mRNA complement(join(<917670..917777,917861..917974, 918029..918196,918244..918377,918431..918517, 918571..>918634)) /locus_tag="CRE_04824" /product="hypothetical protein" /db_xref="WormBase:CRE04824" /db_xref="WormBase:WBGene00055796" CDS complement(join(917670..917777,917861..917974, 918029..918196,918244..918377,918431..918517, 918571..918634)) /locus_tag="CRE_04824" /note="contains similarity to Pfam domain PF03083 MtN3/saliva family; contains similarity to Interpro domain IPR004316 (MtN3 and saliva related transmembrane protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86679.1" /db_xref="InterPro:IPR004316" /db_xref="PFAM:PF03083" /db_xref="WormBase:CRE04824" /db_xref="WormBase:WBGene00055796" /translation="MTSLGQTILPYLSFTALSSTVAFFLCGLQICHRIKTRGSSEGTS PAPFLLSFLSCGLFIQYGLLKDDDIITYTNGIGCFLQGCYLLYFYKLTRNRKFLNKVI AIEMCIIGIVVYWVRHSSNSHLTKQTYVGNYCIFLNICSVAAPLFDIGKVVRNKSSES LPLPLCIACFVVCFQWMFYGYIVDDIVILVPNVIATIISILQLSLFIIYPGSPKGVFP EKYEHI" gene complement(<919871..>923833) /locus_tag="CRE_04825" /db_xref="WormBase:WBGene00055797" mRNA complement(join(<919871..920058,920110..920944, 920992..921255,923717..>923833)) /locus_tag="CRE_04825" /product="hypothetical protein" /db_xref="WormBase:CRE04825" /db_xref="WormBase:WBGene00055797" CDS complement(join(919871..920058,920110..920944, 920992..921255,923717..923833)) /locus_tag="CRE_04825" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8Q757" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86564.1" /db_xref="WormBase:CRE04825" /db_xref="WormBase:WBGene00055797" /translation="MARTMDPTSKATFPTDFAASTWTNGTESWYNVYSWVYSQNESDN GDSIRSSTSSQPQTSPSSGLDDHEHRLLCDTPSSPIDPPTFFNNNNKSSELDLNTSWF SPPPITSPLIQTPALAPVQQQKKQESESKDYALLQELLRLNLNTSPPTPASNISTTNP IFSSASPSTSSPWSLPQDETHLHRPAPVTRSTPQTSMNQNIYWNTPASRQTSTSDVDF LQALSNQLTACQVTQQTQPSGVDMTYIMQQQALQQQQQQQQQNNRQWPPKAVFQRYSF MAALQSKVDEVTDEYRQLEKERKQTEAELARHNLGKKISSSNGLPIPKLPTAPSRIDR MVVDFFREHARISTLLAKMEQLTGMSMPIAAHQTLAELLQAISSLYHSRVHERALILQ QLRGEAIHYDEEKEAGVLVEILCLVQQAATRVRAANWYCLMTTLGPLDANQRMQMDQI VSSDYTIPPPPIRPRPV" gene complement(<929673..>930967) /gene="Cre-dhs-11" /locus_tag="CRE_04826" /db_xref="WormBase:WBGene00055798" mRNA complement(join(<929673..929888,929933..930178, 930220..930306,930404..930558,930937..>930967)) /gene="Cre-dhs-11" /locus_tag="CRE_04826" /product="CRE-DHS-11 protein" /db_xref="WormBase:WBGene00055798" CDS complement(join(929673..929888,929933..930178, 930220..930306,930404..930558,930937..930967)) /gene="Cre-dhs-11" /locus_tag="CRE_04826" /note="contains similarity to Pfam domain PF00106 short chain dehydrogenase; contains similarity to Interpro domains IPR002424 (Insect alcohol dehydrogenase family), IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DR777014" /codon_start=1 /product="CRE-DHS-11 protein" /protein_id="EFO86880.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR002424" /db_xref="InterPro:IPR003560" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00106" /db_xref="WormBase:CRE04826" /db_xref="WormBase:WBGene00055798" /translation="MLSSKLAIVTGGGSGIGQEICKKLASSGAQLIVADLKKSSAEST AKLLPGSGHTAFQIDVSKYDDVERLKEFIQSSGHHPGVLVNCAGITKDSTLLKMSREQ WDDVINVNLNSIFMMSQMIARESVKSQTSLSIVNVSSIVGKIGNFGQTNYSATKAGVI GFTKSAARELATKNVRVNAILPGFIRTPMTEAMPPKVLEAMISMVPQRRLGEPEEIAN AVLFLASDMSSYVTGATIEVTGGLGM" gene <932316..>934455 /locus_tag="CRE_04614" /db_xref="WormBase:WBGene00055799" mRNA join(<932316..932911,932964..933342,933385..933488, 933537..>934455) /locus_tag="CRE_04614" /product="hypothetical protein" /db_xref="WormBase:CRE04614" /db_xref="WormBase:WBGene00055799" CDS join(932316..932911,932964..933342,933385..933488, 933537..934455) /locus_tag="CRE_04614" /note="contains similarity to Pfam domain PF00004 ATPase family associated with various cellular activities (AAA); contains similarity to Interpro domains IPR003959 (AAA ATPase, core), IPR003593 (AAA+ ATPase, core); coded for by the following C. remanei cDNAs: DR407683" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86702.1" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="PFAM:PF00004" /db_xref="WormBase:CRE04614" /db_xref="WormBase:WBGene00055799" /translation="MTLTESSQKLQKRRSTRISQLPTKKLDTKKPVRQVKPKLSRAPQ HHEISDSSSSEDEEEAYQMSSKDEEADEKMDAEEFSEEIGEDFSDSEPGVSMTTRSNS IGSNKENNRRRTRSQVLVKQGANETPSKRLAEEFSKTSLATPSKRKLSKQSQLTPKQQ KNTTPRKNIQYSNIRKNVKVFPDSKDSSDESDEEYSHAPSKTLRTPRERLTVKIPKHL VVKQKITPVIISKTPGGTLRTRRRARQNSEEFNEIIDPLDSKSATTLKELASRLHLSK VPEKLPCRENESRDIENFIREVIDKKRGESSAMYISGVPGTGKTATVRAVVNSMKKNN KYPKFVYVEVNAMIFKKTVFVEVYNGIQEEFDISKKTQRSKVSASLARQKLNAIFKEE DSKRPPIVVLIDELDSLCNRKQDVLYDIFEWTALPQSRVTIIGIANTLDFPERMLCQR NASRLDKRRLVFQPYQHGQIQQIVRSRLQGSNLIEPNAVELVAKKIAANTGDLRQALD FLCRAIGIAVEKKSQKLEMSHVLAAQNAVLESLKYRLVKGLRIHQFTMFRAIESLVST LKTYIFNLVIFQTRENEETIFADIYKNYCIICSEVSGLKPASDNFAYGMLLQLASTSL VVLTKGDHGTMNRRVKLGMTTMEAEKAIKAATEQNKSYYSL" gene <934712..>936665 /locus_tag="CRE_04615" /db_xref="WormBase:WBGene00055800" mRNA join(<934712..934809,935277..935779,935833..935903, 935951..936119,936169..936282,936377..936518, 936566..>936665) /locus_tag="CRE_04615" /product="hypothetical protein" /db_xref="WormBase:CRE04615" /db_xref="WormBase:WBGene00055800" CDS join(934712..934809,935277..935779,935833..935903, 935951..936119,936169..936282,936377..936518, 936566..936665) /locus_tag="CRE_04615" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PCL1; coded for by the following C. remanei cDNAs: DR782355" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86732.1" /db_xref="WormBase:CRE04615" /db_xref="WormBase:WBGene00055800" /translation="MLNEADKKSIKENAQKALDILDDQVFGLSEQERQIHNIVYDFLQ SKDGKCCLLEGGVFSMQELSIYYSGERNCGRESILQKVMNKFRKELRVINAGFVAADP NYQQELAREGDDGYSVFLIRDADKLITPQQQKFLYTMVDKATHYSWLVFFSISRQDFA QNLQKQATSRIPKVQVSFDMTHDFDEFCSTMQKFLIPTECEKDERYTKFILSLKLEKK LKPVFQTSQYVTLKQLAAQLLMLFGYYCENNEDWNTTVINKKVDELVEECFPYHNEKS ILLKDQTLRSQSVFLCVWKLLQDKESEGLLLVPKTSYRNVFLAYKKLANNYYKPLDVR SDIYVYRELDHLVTMGLLKADESTNVTNTSFRKIWLHFNNKIVQETIPQLSLPERINV FLDTVL" gene <936775..>937621 /locus_tag="CRE_04616" /db_xref="WormBase:WBGene00055801" mRNA join(<936775..937177,937243..937457,937508..>937621) /locus_tag="CRE_04616" /product="hypothetical protein" /db_xref="WormBase:CRE04616" /db_xref="WormBase:WBGene00055801" CDS join(936775..937177,937243..937457,937508..937621) /locus_tag="CRE_04616" /note="contains similarity to Pfam domain PF03587 Nep1 ribosome biogenesis protein; contains similarity to Interpro domain IPR005304 (Suppressor Mra1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86844.1" /db_xref="InterPro:IPR005304" /db_xref="PFAM:PF03587" /db_xref="WormBase:CRE04616" /db_xref="WormBase:WBGene00055801" /translation="MFNFIFSSIISQMSHEYDTVAPPNAKRMKTDAQLELKKTLYVVL EGCSLETAKVGGEYVILSSDKHANFLRKQKKDPADYRPDILHQCLLNLLDSPLNREGK LRVFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAETSQKLMSVVKNPV SNHLPVGSRKMLMSYNVPELTLANKLVSPDTDEPLVVVIGGIARGKIVVDYTDSETKI SSYPLSAALTCAKVTSGLEEIWGII" gap 939168..939177 /estimated_length=10 gene <940654..>941510 /locus_tag="CRE_04617" /db_xref="WormBase:WBGene00078740" mRNA join(<940654..940755,941400..>941510) /locus_tag="CRE_04617" /product="hypothetical protein" /db_xref="WormBase:CRE04617" /db_xref="WormBase:WBGene00078740" CDS join(940654..940755,941400..941510) /locus_tag="CRE_04617" /note="contains similarity to Homo sapiens Isoform 1 of Centaurin-gamma-3; ENSEMBL:ENSP00000334157" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86700.1" /db_xref="WormBase:CRE04617" /db_xref="WormBase:WBGene00078740" /translation="MSRHLLSGGNNTLHSEQIRAEIQRFESVHPCIYQIYDLLNLLPD GCHAISEQIREQIVSVEGMFSILLLE" gene <947136..>954948 /gene="Cre-cnt-2" /locus_tag="CRE_04618" /db_xref="WormBase:WBGene00055802" mRNA join(<947136..947874,947969..948027,949970..950057, 950124..950353,950740..950875,952674..953221, 953268..953392,953469..954747,954796..>954948) /gene="Cre-cnt-2" /locus_tag="CRE_04618" /product="CRE-CNT-2 protein" /db_xref="WormBase:WBGene00055802" CDS join(947136..947874,947969..948027,949970..950057, 950124..950353,950740..950875,952674..953221, 953268..953392,953469..954747,954796..954948) /gene="Cre-cnt-2" /locus_tag="CRE_04618" /note="contains similarity to Pfam domains PF00169 (PH domain), PF01412 (Putative GTPase activating protein for Arf), PF00023 (Ankyrin repeat) (2), PF08477 (Miro-like protein); contains similarity to Interpro domains IPR003577 (Ras small GTPase, Ras type), IPR013684 (Miro-like), IPR003578 (Ras small GTPase, Rho type), IPR001849 (Pleckstrin-like), IPR001164 (Arf GTPase activating protein), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR002110 (Ankyrin); coded for by the following C. remanei cDNAs: DY527904, DR778335" /codon_start=1 /product="CRE-CNT-2 protein" /protein_id="EFO86595.1" /db_xref="InterPro:IPR001164" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR013684" /db_xref="PFAM:PF00023" /db_xref="PFAM:PF00169" /db_xref="PFAM:PF01412" /db_xref="PFAM:PF08477" /db_xref="WormBase:CRE04618" /db_xref="WormBase:WBGene00055802" /translation="MPLIRNYDYYNFIDVMPGPSHHPVTVTNHSHLGSTRPASYSAVP SKGRMYYGKNEYRGNLNATINDPTEFEEHFDIHANDPLEGGDDKRKKKRWRDLLFPKS RHSSRKDKENSNVSVTTRSLSSVSFRSEKPERSRRRESGSLSRHRYIPPPPLPMPPRR VMTSTSIGYSDDAMTSSSSHTATDYDDIVPTPSYVIYPASSIAQARKIGDRGNNSINP SLPAVFLGRKIVANGTTHKLFRSPTYHHDAFVNSHEWTLSRSISEMKLGIVGTSQSGK TSLVHRYLTGTYTPDESPEGGRFKKEVVIEGQSHLLLIRDEGQQHLDVQFCQWVDAVV FVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTKDHISEKRARVITEDEGRQLA AQMKRCSYFETSSTYGTNVERVFKEACCKIIQSRIRTQVGNATSQARTPTPTHTESGR KDYQDPRYISSNSFVMPSNMRPSFPTNSSRRNTVHHREQPSSSRTASERSMSAMLGAP YGNRMAAGVSPSASQKSVHSIANGCYSRSSAALLDSDTPAVNSYLIDSMSSAGTPLNH QNSTNQVSASTSHLPTPSSTPNTQRKNRRISNIFRQKDHQEEKSKMIESLNLGIGRAI PIKQGNLYKKSSKSALNREWKKKYVCLYSDGRLTYHTNLKEYMDKTAQGKEMDLKLAT IRITGRLHPLHSHRVTNASSSTDGSGTPTLKSYEPRRSDVGVGANSGDGTSGGGSDDA IKENQRQQFSPPAMPQTVAGKKKRESRKIGANAKHNDEEDECFEVINNCLMRWEFCAG SLEERDEWIQAIGGEIEKSLGKEVANAKTNNRAVADRPDIAALRSIPGNGKCADCGNP AAEWASINLGIVICIECSGIHRNLGSHISKVRGLELDQWPVEHLAVMQAIGNDKANEM WEYSLMNERKPTLDSSREEKERFIDRKYVQKAFLKPIPTGEPVTSQLISAVLARDVMS LNVLLANGMKVDEVNTTTKDGRTVLHLAASIGSVELAQLLIWHNADTRILDNNGRSCL FYARSNGFRDVFDMLVTSGLSPDYGLPQENNDYSQMPEFSAMGSTSNREYSMSGDDTY SLRRISMAPPQVPARRYLPQQPELDETSVI" gene <955738..>958155 /locus_tag="CRE_04619" /db_xref="WormBase:WBGene00055803" mRNA join(<955738..955802,956181..956275,956323..956566, 956855..957169,957219..957344,957392..957773, 957823..>958155) /locus_tag="CRE_04619" /product="hypothetical protein" /db_xref="WormBase:CRE04619" /db_xref="WormBase:WBGene00055803" CDS join(955738..955802,956181..956275,956323..956566, 956855..957169,957219..957344,957392..957773, 957823..958155) /locus_tag="CRE_04619" /note="contains similarity to Pfam domain PF00743 Flavin-binding monooxygenase-like; contains similarity to Interpro domains IPR012143 (Dimethylaniline monooxygenase, N-oxide-forming), IPR002253 (Flavin-containing monooxygenase (FMO) 1), IPR000960 (Flavin-containing monooxygenase FMO), IPR002257 (Flavin-containing monooxygenase (FMO) 5), IPR001327 (Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DR780426, DR778196, DR781342, DR777473, DY526399" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86895.1" /db_xref="InterPro:IPR000960" /db_xref="InterPro:IPR001327" /db_xref="InterPro:IPR002253" /db_xref="InterPro:IPR002257" /db_xref="InterPro:IPR012143" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00743" /db_xref="WormBase:CRE04619" /db_xref="WormBase:WBGene00055803" /translation="MSSEKKHLLVIGAGASGLPSIRHALLYPNVEVTCFEKSNDIGGL WNYKPHKTDLSTVMKSTVINSSKEMTAFSDFPPEDTMANFMHNREMCRYLKNYAKNFG LLKYIKLNHSVVSIVRNDDYETSGKWKVRYTDGDGKESEKVFDGVMLCSGHHAIPYIP SPWPGQEKFKGKITHSHDYKDQRGYEDKVVVVVGLGNSGGDCAVELSRVSKQVYLVTR RGSWVFNRLFDRGEPVDMVFNSKFQMFLSQTIPAPLVNWNFERLLNLRFDHEKYGLKP KHPALGAHITINDELPNRIACGTVRVKPAIKSFTENSIEFEDGSVVENVDEVLLATGF SFHFNLVEGGNLIKVNENKTDAYKYMFPLATSDHNTLAVIGLIQPIGSIMPISEMQAR VYLETFAAGRKLPDRDQMKADVNVKREEMSRRYVESRRHTIQVDYANYMHELGDLIGC NPDMRTLWRQKPFLAWKVYFGPCVPYIFRLNGPNSWEGAENAIWDVSYRAERPTNNKL ERRNGELKKQN" gene complement(<958921..>959394) /locus_tag="CRE_04827" /db_xref="WormBase:WBGene00055805" mRNA complement(join(<958921..958974,959018..959350, 959383..>959394)) /locus_tag="CRE_04827" /product="hypothetical protein" /db_xref="WormBase:CRE04827" /db_xref="WormBase:WBGene00055805" CDS complement(join(958921..958974,959018..959350, 959383..959394)) /locus_tag="CRE_04827" /note="contains similarity to Brugia malayi RIKEN cDNA A930016P21, putative.; TR:A8PKI2" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86617.1" /db_xref="WormBase:CRE04827" /db_xref="WormBase:WBGene00055805" /translation="MISVVLQCAKEGYRSTGVELNSILVAYSKYRSIKEGLGKEARYF PLIKTTSKVVFCFRFMRKNIFKTDLSPYETAVIFGAESLMGDLVPKLSEMRSNTNLLA CRFPLPENDAWKLEHQIGEGIDAVWVYKRN" gene complement(<959713..>962164) /locus_tag="CRE_04828" /db_xref="WormBase:WBGene00078733" mRNA complement(join(<959713..961215,961267..961902, 961940..>962164)) /locus_tag="CRE_04828" /product="hypothetical protein" /db_xref="WormBase:CRE04828" /db_xref="WormBase:WBGene00078733" CDS complement(join(959713..961215,961267..961902, 961940..962164)) /locus_tag="CRE_04828" /note="contains similarity to Pfam domains PF03124 (EXS family), PF03105 (SPX domain); contains similarity to Interpro domains IPR004342 (EXS, C-terminal), IPR004331 (SPX, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86645.1" /db_xref="InterPro:IPR004331" /db_xref="InterPro:IPR004342" /db_xref="PFAM:PF03105" /db_xref="PFAM:PF03124" /db_xref="WormBase:CRE04828" /db_xref="WormBase:WBGene00078733" /translation="MGTNTGMVIAGVAGATALVITAAAVPFVAPALRRVCIPYVPATT EQLSNVSRALSLATKNSKGTLIDLGSGDGRVMKFGEQLASHLTPEWRKQYIDYERLKN LLYDDMMEVPADDDRREEHISRLDEKFFNECDQELTKINLFFSQKIAEGQGKHHELQT ELQVFKDVLGSRSEPSGIRRRFGGKDRFHKETTRNEQQLKLAFSEFYLSLVLVQNYQQ LNATGFRKILKKHDKLTGNERGLDWRINKVEKSSFFLNREIETLITNVETSVINDLEG GNRQAGMKRLKVPPLSEKQKPLTTFSLGLFIGASIVLLLAILLTWMASPARPQEPKWV AVRLFRGPLLLFLSIFLCGVNMAGWAAAGVNHVLIFEVDPRNHLSYQTLMQIASFMIM LWSFAVLAYLYAHMLHIPPFAPPLVLMIICLVLLLNPIAKPDSVFHRNSRFWLLKHCY KCFTSPFHFVTFTDFWLGDQMNSLTTAFLDFQYFVCFYATEVDYSNGWIEVKGINSTT GSVPWGSVELSNGKDQCASAAGLRSLMSIIPAMIRFLQCLRRYRDTKRVHPHLVNAGK YSTTFFVVACGALNKYYEASDPNSTSIFFYIWILSYIMSFTYTFLWDIFMDWGLIDPR APKEARFLREEMIYGSKWYYYLAIAQDFVLRLAWVLNVSLGEAWTLDSDFLTTVTAPF EVFRRFIWNYFRLENEHVNNCGQFRAVRDISVKPIRKGDLESLLSKMDQMDGVTHRGH DLMERVKKQKKSAKASRQLLRKNRFNRMIAAAPVVTTTFIDTTNTNT" gene <962840..>963500 /locus_tag="CRE_04620" /db_xref="WormBase:WBGene00055806" mRNA join(<962840..963197,963250..>963500) /locus_tag="CRE_04620" /product="hypothetical protein" /db_xref="WormBase:CRE04620" /db_xref="WormBase:WBGene00055806" CDS join(962840..963197,963250..963500) /locus_tag="CRE_04620" /note="contains similarity to Pfam domain PF00542 Ribosomal protein L7/L12 C-terminal domain; contains similarity to Interpro domains IPR013823 (Ribosomal protein L7/L12, C-terminal), IPR014719 (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86736.1" /db_xref="InterPro:IPR013823" /db_xref="InterPro:IPR014719" /db_xref="PFAM:PF00542" /db_xref="WormBase:CRE04620" /db_xref="WormBase:WBGene00055806" /translation="MLFLQVTMLARTLRPISKVFRSSAKYSQAAGNFYLLLHSRIINS FSGLPLNEGSAAPLPSEDRAISSKVSSLVEEIANLSLLDVSDLNWALKKRLNIPDQPL MAASAFAPAAAAAPAAQAEAEATSDVPQKMTFTVKLTKFDDTKKIAIIKEIRNAIPGL NLVQAKKFVETAPVNVKEDLGKAEAEELKGILEKAGAVIEIV" gene complement(<963860..>965157) /locus_tag="CRE_04829" /db_xref="WormBase:WBGene00055807" mRNA complement(join(<963860..964205,964251..964355, 964404..964614,964672..964774,964822..964889, 964961..965073,965117..>965157)) /locus_tag="CRE_04829" /product="hypothetical protein" /db_xref="WormBase:CRE04829" /db_xref="WormBase:WBGene00055807" CDS complement(join(963860..964205,964251..964355, 964404..964614,964672..964774,964822..964889, 964961..965073,965117..965157)) /locus_tag="CRE_04829" /note="contains similarity to Brugia malayi Putative uncharacterized protein (Fragment).; TR:A8PEP3" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86739.1" /db_xref="WormBase:CRE04829" /db_xref="WormBase:WBGene00055807" /translation="MSINIFKSRIRSPKDILTHLVFGCAIGYLIGIVILFDEDYDISK HIHLVEHEKPTQKTDSVNLRCVIIIHKATHKPEKIISAFDDGYTKLCQETIYFTNNQK FFDKFQKNYTMYFVDSNLNHFYWSFYQYVMEFSSKVPSQWTFIGDDQTYLIVPNLRNV LTGFDSDKPVVLGKVRDTSNLFSWLFPLSNFKKISVRGGVALSNSAIDRLSACKGFFF ARASDYALYDCSEEYDVQIVDPFDEDALRLFNDLPPKQIIAPDSKLFRSRPTIGEKCS DHAVSFGQLSEKDMRVLEYGMSLKVFGRGGLCCLVATVPLICLIARSPDFRI" gene complement(<965853..>967082) /locus_tag="CRE_04830" /db_xref="WormBase:WBGene00055808" mRNA complement(join(<965853..966293,966340..966434, 966483..966659,966708..966956,967004..>967082)) /locus_tag="CRE_04830" /product="hypothetical protein" /db_xref="WormBase:CRE04830" /db_xref="WormBase:WBGene00055808" CDS complement(join(965853..966293,966340..966434, 966483..966659,966708..966956,967004..967082)) /locus_tag="CRE_04830" /note="contains similarity to Interpro domain IPR001932 (Protein phosphatase 2C-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86638.1" /db_xref="InterPro:IPR001932" /db_xref="WormBase:CRE04830" /db_xref="WormBase:WBGene00055808" /translation="MVAGVRLLAYGRLAVRAVFSVSALDLGSSIGPEAISSGRRGLSS SASKPGKPPTEGSPSPAHSPHVENVIASCAGFPKDMLNGPSTVQDKGVFGDDAWFISR FKNTFVVGVADGVGGWRKYGIDPSAFSRRLMKECEKRVQGGEFDPKRPDSLLDFAFRA SAEAPRPVGSSTACVLVVHQEKLYSANLGDSGFMVVRNGKIISKSREQVHYFNAPFQL TLPPEGYQGFIGDRADMADKEEMDVKKGDLILLATDGVWDNLSEQQVLDQLKALDERK SNVQEVSCRRFKYIAIKLFFKVCNALALTARRLAFDSKHNSPFAMKAREHGFLAPGGK PDDITLVLLLIA" gene complement(<971346..>976165) /gene="Cre-tat-3" /locus_tag="CRE_04831" /db_xref="WormBase:WBGene00055810" mRNA complement(join(<971346..971363,971412..971494, 971539..971671,971719..971985,972030..972482, 972529..973371,973418..973681,973773..974432, 974486..975959,976005..>976165)) /gene="Cre-tat-3" /locus_tag="CRE_04831" /product="CRE-TAT-3 protein" /db_xref="WormBase:WBGene00055810" CDS complement(join(971346..971363,971412..971494, 971539..971671,971719..971985,972030..972482, 972529..973371,973418..973681,973773..974432, 974486..975959,976005..976165)) /gene="Cre-tat-3" /locus_tag="CRE_04831" /note="contains similarity to Pfam domain PF00702 haloacid dehalogenase-like hydrolase; contains similarity to Interpro domains IPR006539 (Phospholipid-translocating P-type ATPase, flippase), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR005834 (Haloacid dehalogenase-like hydrolase)" /codon_start=1 /product="CRE-TAT-3 protein" /protein_id="EFO86796.1" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006539" /db_xref="PFAM:PF00702" /db_xref="WormBase:CRE04831" /db_xref="WormBase:WBGene00055810" /translation="MYTINSRYIFLNFQKSAGSDVEASTSNSSSALYDTTTSKGHHRR TSSLWVPPTRPIFSSPTQVIKEKAENGGRILKAHPVTRWLFPSQPILPQQRLVVPNNQ KEPPPRYEQPNRKYCGNRISTTKYSVLTFIPKNLFEQLHRAANLYFIFIVILNMIIGA FGKYISVMPIAFVLGITAIKDAFEDYRRYKSDQKINHSTCRVWDASQQRYRKLEWQNI LVGDFVHLSHDEIIPADILLLRSSDVNGVCYVETCNLDGESNLKQRQAIRAMGKYHNA NVPLEYSPAEFNYRVSINYGNFSTSYEKFQIACEQPTTDVYKFEGRLEAMEGGPPLAR EFTILAKENVLLRGCVVKNTDFVEGIVLYAGKDTKAMLNNSGPRYKRSSLEKMTNIDI LWSVCTLLALCVLGAVLSGVWLRNYSAPYTVPFLVFIPPNSTYHNNNDSQYKYSPSYE SWFSFWSYIIVLQVSQSKISNFLIVLIFQVMIPISLYVSIEFIKIFQVWFMSQDRNMY YDKVDKRLQCRALNITEELGQIQYVMSDKTGTLTENQMVFRRCSVNGNDYGGRPVLDA TDSSLELVASNLRSNQPTEKKLQLAALAEAAANTGRLRPSRDPTLESHLASSVLKQGS DIDDPVFAFFLTMAICNTVVVNAKPHEDLMDPDGDIVNSRFATEEDALSPKRESSSES ITGNKYLADVEEESLSSNASTPVVAEEKVVDDGFEEIELIEFPEVKVEDTQPSDKDIE VIEKKDDEKEGTNNYNGERKEGKGFGILHRPSILSVPFAKLKGIKSPFRRSVDKRSSS SEVNAPPPHSFYDSESPDELALVEAAREYGVRLLKRRFDDVIVYLRHSTKSVKYKVLH TLPFDADRKRMSVIIREVTGKKRIIVLTKGADATVLPVLSNEFCTSTRGEEVIFKAQE HLTQYAKEGLRTLCLSMKVWSEEEYAEWKEKHEEAELDMVDKDTLLVESTLRAEQDLE LLGVTAIEDRLQDGVPECIHSLREAGIRVWVLTGDKIETAVNIAYSSRLFSPSMDLLN IGANGVRAISDLLGEHLKRIARAQEVSVDAVDSFGLVLNAATMNYCLDPHNIDRFVKL LRGCRSVLCCRATPLQKAQLVNLAKNHLKGKVLAIGDGANDVSMIQGADVGVGLSGQE GMQAVMSSDFAMARFRYLSNLLLIHGHWNYYRLAQTILYFFYKNAMLVFVIFWYQIFN GFSAQVPIDPVYLMVYNLIFTSVPPLLFGCLDQDASAELLLDCPKLYEQGRLGKRYRW YSFWINMLDAIWQSLVVYFICYFTYRGSNVDMWTFGHLLVTQLIIVNTFHLALFVQYW TWPMFWSMFLSVLLFFICALLYNGFVTANWTWTNVKDPPSMVSLKSFSSLEFWMALVI SVILCLTPRYVITAVVNTVSPSTTLRTRLGAEDGIKKAESRFTSCAVGCLSAPFKCVR LCCKKKATAQLEQVQ" gap 979888..979897 /estimated_length=10 gene complement(<981306..>983112) /locus_tag="CRE_04832" /db_xref="WormBase:WBGene00055811" mRNA complement(join(<981306..981524,981548..982023, 982071..982353,982400..982817,982991..>983112)) /locus_tag="CRE_04832" /product="hypothetical protein" /db_xref="WormBase:CRE04832" /db_xref="WormBase:WBGene00055811" CDS complement(join(981306..981524,981548..982023, 982071..982353,982400..982817,982991..983112)) /locus_tag="CRE_04832" /note="contains similarity to Pfam domain PF01412 Putative GTPase activating protein for Arf; contains similarity to Interpro domain IPR001164 (Arf GTPase activating protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86780.1" /db_xref="InterPro:IPR001164" /db_xref="PFAM:PF01412" /db_xref="WormBase:CRE04832" /db_xref="WormBase:WBGene00055811" /translation="MLRGKVDPKKEEQERLQGFLLEMLKEEENKYCADCQAKTPRWAA WNLGVFICIRCAGIHRNLGVHISKVRSVNLDSWTPEQVQTMRVMGNEKARHVYEHDLP AQFRRPTNDQQMEQFIRSKYEQKRYILRDFVYPTVNASELPKSLAQASKKNGTPVVSI TTRGNTAITSNGHSSASPSAAPSLLDFSDPPAPTSTTKNSVNFFDEFEGLSLNNSVST AAPPTHASNDDYDDFGSFVSANAQSAAATVPTIAAFADFSSATTTNSSAVPSSGLNDL TSLASPENGGDKKKTNADILSLFGPSGGVAASNVVAPGGFAGFGLQAGPQQSQAPQNS LPAFGTPHVQPPQNDMFGGLSGINFGTPSAAPPQMTMSHNPPQNFSSAFASMSSNQSQ PSFSPKPTPTSPTSSQGFNIPNKSNAFADLALGKVQEFPDSVMKTNYGQSALHSTPTS SSVNHMYSMPMSTSSSSMGTTTATNNDLFDMFASAPPPVPVTVNSSSGLDDLLGL" gene complement(<983921..>984326) /locus_tag="CRE_04833" /db_xref="WormBase:WBGene00055812" mRNA complement(join(<983921..984040,984086..984167, 984205..>984326)) /locus_tag="CRE_04833" /product="hypothetical protein" /db_xref="WormBase:CRE04833" /db_xref="WormBase:WBGene00055812" CDS complement(join(983921..984040,984086..984167, 984205..984326)) /locus_tag="CRE_04833" /note="contains similarity to Pfam domain PF08555 Eukaryotic family of unknown function (DUF1754); contains similarity to Interpro domain IPR013865 (Protein of unknown function DUF1754, eukaryotic)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86884.1" /db_xref="InterPro:IPR013865" /db_xref="PFAM:PF08555" /db_xref="WormBase:CRE04833" /db_xref="WormBase:WBGene00055812" /translation="MKDTVVKGSLKLKKVSTEAPKKAKKSKPTVDPKQVDMTIRRDSR NVSSSGPHKTEAELRFEARRQANMAERMLKRAAVSHREKVEKFNKQMEEMTEFNDIPK VSWTK" gene complement(<984607..>986045) /gene="Cre-tbb-1" /locus_tag="CRE_04834" /db_xref="WormBase:WBGene00055813" mRNA complement(join(<984607..985007,985024..985836, 985880..>986045)) /gene="Cre-tbb-1" /locus_tag="CRE_04834" /product="CRE-TBB-1 protein" /db_xref="WormBase:WBGene00055813" CDS complement(join(984607..985007,985024..985836, 985880..986045)) /gene="Cre-tbb-1" /locus_tag="CRE_04834" /note="contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain), PF03953 (Tubulin/FtsZ family, C-terminal domain); contains similarity to Interpro domains IPR002454 (Gamma tubulin), IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR008280 (Tubulin/FtsZ, C-terminal), IPR013838 (Beta tubulin, autoregulation binding site); coded for by the following C. remanei cDNAs: DY526009, DR781307, DY527635, DY528293, DT936279, DR408816, DY525851, DT936296, DT933341, DR780075, DR780718, DT935491, DR778145, DR780240, DR781005, DR775914, DT934266, DR778386, DT937495, DY526708, DR776064, DR782619, DY528769, DR778877, DR776942, DY527189, DR782435, DR780584, DT933982" /codon_start=1 /product="CRE-TBB-1 protein" /protein_id="EFO86546.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR002453" /db_xref="InterPro:IPR002454" /db_xref="InterPro:IPR002967" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR004057" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR013838" /db_xref="PFAM:PF00091" /db_xref="PFAM:PF03953" /db_xref="WormBase:CRE04834" /db_xref="WormBase:WBGene00055813" /translation="MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWA KGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP DRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLT NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAK GTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMRVSSVQISNFQ EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRIS EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDEPLDEYAG EGETYESEQ" gene <986770..>990236 /gene="Cre-rib-2" /locus_tag="CRE_04621" /db_xref="WormBase:WBGene00055814" mRNA join(<986770..986852,986899..986976,987027..987127, 987170..987299,987345..987534,987594..987718, 988501..989242,989286..989900,989940..>990236) /gene="Cre-rib-2" /locus_tag="CRE_04621" /product="CRE-RIB-2 protein" /db_xref="WormBase:WBGene00055814" CDS join(986770..986852,986899..986976,987027..987127, 987170..987299,987345..987534,987594..987718, 988501..989242,989286..989900,989940..990236) /gene="Cre-rib-2" /locus_tag="CRE_04621" /note="contains similarity to Pfam domains PF09258 (EXTL2, alpha-1,4-N-acetylhexosaminyltransferase), PF03016 (Exostosin family); contains similarity to Interpro domains IPR004263 (Exostosin-like), IPR015338 (EXTL2, alpha-1,4-N-acetylhexosaminyltransferase); coded for by the following C. remanei cDNAs: DR781087, DT933199, DR408695" /codon_start=1 /product="CRE-RIB-2 protein" /protein_id="EFO86590.1" /db_xref="InterPro:IPR004263" /db_xref="InterPro:IPR015338" /db_xref="PFAM:PF03016" /db_xref="PFAM:PF09258" /db_xref="WormBase:CRE04621" /db_xref="WormBase:WBGene00055814" /translation="MISSLIIFNYSFSDKSPSWIPQSGALIQNVEEINDYDAACSGYS VGRILREQKRVLASVRSELVESQNKIEEIRAVQEELQRLIPQKQLELSALEGEIEAAQ RQLEELRETQNVKVFLPYSPLVHPKVSQELPQVPHSILNFDDVIDYSRCSISSFMPIF VDRITDGRYEKEWENVFRKAASVLTEKSDEACLKIRITNGILDTDDSYNTVLFNTGNP LKVLQNLKLIMVQSSQLRSFDLAVLANYTSPIQQSPVPLLPIKRKYLIGMVVRENSRN LDLSTLEDSGKNTSHKFIIRKCYENKSNCSIEERRRIHSQSIFCFLLESDEFLQDFID SIEFGCIPIILSISARLPFEDLIDWRRAAHRLPIARLPEAHFIIRSFETSDILEMRRI GRTFFETYMADRKSIADSLIAALRFKLQIPTLETRSNQKNQAVPLFNSSFTSPRGSLV NVQPNFDDEYLLGPLESRVESVSFAYNFTEFQLYSYEIWNTVYSPFRSKEFIINAAEP PAEAEFHEDTKIGFRAIEPGSGVEFSKALGGNRQREQFTVILLTYERDSVLVGALERL HQLPYLNKILVVWNNIHREPPDTWPSLHVPVEFIRVTENSLNNRFVPWDRIETESVLS LDDDIDLMQQEIILAFRVWRENRDRIVGFPARYHARYGDSMFYNSNHTCQMSMILTGA AFIHKVNYLSAYTYQMSTAIRDHVDNIKNCEDIAMNFLVAHLTRKPPIKTTSRWTLKY DEPDIYKSKFFPDVPPVQKACSRQTLTSKNVTSAYDCSPKFMGITH" gene complement(<990678..>991504) /gene="Cre-ran-1" /locus_tag="CRE_04835" /db_xref="WormBase:WBGene00055815" mRNA complement(join(<990678..990770,990817..991005, 991051..991172,991217..991342,991387..>991504)) /gene="Cre-ran-1" /locus_tag="CRE_04835" /product="CRE-RAN-1 protein" /db_xref="WormBase:WBGene00055815" CDS complement(join(990678..990770,990817..991005, 991051..991172,991217..991342,991387..991504)) /gene="Cre-ran-1" /locus_tag="CRE_04835" /note="contains similarity to Pfam domain PF00071 Ras family; contains similarity to Interpro domains IPR002041 (Ran GTPase), IPR003577 (Ras small GTPase, Ras type), IPR003578 (Ras small GTPase, Rho type), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR013753 (Ras); coded for by the following C. remanei cDNAs: DR408224, DR778434, DY527671, DT933407, DR777201, DR406310, DR781243, DR775554, DY526685, DR778380, DT934804" /codon_start=1 /product="CRE-RAN-1 protein" /protein_id="EFO86633.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR002041" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR013753" /db_xref="PFAM:PF00071" /db_xref="WormBase:CRE04835" /db_xref="WormBase:WBGene00055815" /translation="MSGGDGIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGV EVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPN WHRDLARVCENIPIVLCGNKVDVKDRKVKAKTITFHRKKNLQYYDISAKSNYNFEKPF LWLARKLLGDPNLEFVAMPALAPPEVQMDPAMIAEYEKDLDNAAKADLPDDDDDL" gene <992101..>993583 /locus_tag="CRE_04622" /db_xref="WormBase:WBGene00055816" mRNA join(<992101..992148,992201..992287,992334..992812, 992863..>993583) /locus_tag="CRE_04622" /product="hypothetical protein" /db_xref="WormBase:CRE04622" /db_xref="WormBase:WBGene00055816" CDS join(992101..992148,992201..992287,992334..992812, 992863..993583) /locus_tag="CRE_04622" /note="contains similarity to Pfam domains PF01509 (TruB family pseudouridylate synthase (N terminal domain)), PF08068 (DKCLD (NUC011) domain), PF01472 (PUA domain); contains similarity to Interpro domains IPR004802 (Putative rRNA pseudouridine synthase), IPR002501 (tRNA pseudouridine synthase B, N-terminal), IPR012960 (DKCLD), IPR004521 (Uncharacterized domain 2), IPR002478 (PUA); coded for by the following C. remanei cDNAs: DY529167, DR409368, DR775721, DT933447, DT935306" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86878.1" /db_xref="InterPro:IPR002478" /db_xref="InterPro:IPR002501" /db_xref="InterPro:IPR004521" /db_xref="InterPro:IPR004802" /db_xref="InterPro:IPR012960" /db_xref="PFAM:PF01472" /db_xref="PFAM:PF01509" /db_xref="PFAM:PF08068" /db_xref="WormBase:CRE04622" /db_xref="WormBase:WBGene00055816" /translation="MGKKDKRSKLEGDELAEAQQNGSFQLPSSTEIAKLDASQWPLLL KNYDKLNVRTNHYTPHVEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILR CEKTGHSGTLDPKVSGCLIVCIDRTTRLAKSQQGAGKEYICIFKLHEEVEDDRKVKQA LEKLTGALFQRPPLISAVKRQLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTIC VHLGLILGCGGQMQELRRNRSGICDENENMVTMHDVLDAQYLLDTQKDESYMRHIVRP LEALLTQHKRVVVKDSCVNAICYGAKILIPGVLRYDDDIEVGKEIVIMTTKGEAVCIA IAQMSTSTIASVDHGIVAKSKRVIMERDVYGRKWGLGPVASKKKQMVKDGLLDKFGKP NDSTPKSWAKEYVQTDKKAAVKTEVVEEEEDVAPKKKAKKAVKEELSSSDSE" gene complement(<993805..>996016) /gene="Cre-hpl-2" /locus_tag="CRE_04836" /db_xref="WormBase:WBGene00055817" mRNA complement(join(<993805..994026,994429..994500, 994546..994696,995322..995539,995582..995671, 995848..995931,995975..>996016)) /gene="Cre-hpl-2" /locus_tag="CRE_04836" /product="CRE-HPL-2 protein" /db_xref="WormBase:WBGene00055817" CDS complement(join(993805..994026,994429..994500, 994546..994696,995322..995539,995582..995671, 995848..995931,995975..996016)) /gene="Cre-hpl-2" /locus_tag="CRE_04836" /note="contains similarity to Pfam domains PF01393 (Chromo shadow domain), PF00385 ('chromo' (CHRromatin Organisation MOdifier) domain); contains similarity to Interpro domains IPR000953 (Chromo domain), IPR008251 (Chromo shadow)" /codon_start=1 /product="CRE-HPL-2 protein" /protein_id="EFO86862.1" /db_xref="InterPro:IPR000953" /db_xref="InterPro:IPR008251" /db_xref="PFAM:PF00385" /db_xref="PFAM:PF01393" /db_xref="WormBase:CRE04836" /db_xref="WormBase:WBGene00055817" /translation="MSRSLAKKPKLDDSKNNVFIVEKVLDKRPGKAGREEFLIQWQGF SEDDSSWEPRENLHCIELLEEFEKEYAKRDRPIRRRQKSPEQDVVAGPAEEEPSSSDK FSLNGKQLKCIVGLTRSPGELHFLCKFNDDTARLLPAKEINNRYRPFVDEYGIFLRRQ MDKRQKRLEEGKKKSIDADDDDDEWPDIPPGYNFLNVEDQDRHLGKETRFSQDKDISE TPTASDILRDIHIEANESMLSSFPHDSAEETLDSVETNDSLLAVFDDSSNSPPPCPIV IDTVPDDDELLFPGLP" gene complement(<998155..>1001781) /gene="Cre-tag-331" /locus_tag="CRE_04837" /db_xref="WormBase:WBGene00055819" mRNA complement(join(<998155..998447,998492..998782, 1001130..>1001781)) /gene="Cre-tag-331" /locus_tag="CRE_04837" /product="CRE-TAG-331 protein" /db_xref="WormBase:WBGene00055819" CDS complement(join(998155..998447,998492..998782, 1001130..1001781)) /gene="Cre-tag-331" /locus_tag="CRE_04837" /note="contains similarity to Pfam domains PF00642 (Zinc finger C-x8-C-x5-C-x3-H type (and similar)), PF00097 (Zinc finger, C3HC4 type (RING finger)); contains similarity to Interpro domains IPR000571 (Zinc finger, CCCH-type), IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)" /codon_start=1 /product="CRE-TAG-331 protein" /protein_id="EFO86761.1" /db_xref="InterPro:IPR000571" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00097" /db_xref="PFAM:PF00642" /db_xref="WormBase:CRE04837" /db_xref="WormBase:WBGene00055819" /translation="MDLFRKPKKRNVTTQLVRKKESSSDEEPEDSVKDFAKKRRRTNP MVQSVRSWYFYLPAIRRKFLIVRHVLQTKKDDTRLQNVSDNSDDSDDDDNQSIAVATH SFAASGEAGPSGPSDQGATATLEVDTDYSRDAQAQFERVQQQLKDGVEKDGKILYKGS ALYGAKEAKDTAKGNAASGYNRVGPVRAPQFLRQTVRWDFAPDICKDYKETGFCTFGD SCKFVHDRSDYKHGWEIDEEYEAGKYGVEDDTDYEIRDQDDAFPEDCFICGKPFVDPI VTKCKHYFCTDCALKAFQKSSKCPVCHQNTEKIMNAAKDLINFLKRKKKQDNEKFITQ QDNEEDDDTVRENCTEEHDHNHHNLDQEDGNQSDDNINLDHSENNANDEEQEIVMEDV EGLEHGENNSESDSEESDA" gap 998969..999373 /estimated_length=405 gap 1000746..1000755 /estimated_length=10 gene complement(<1001809..>1002644) /locus_tag="CRE_04838" /db_xref="WormBase:WBGene00055820" mRNA complement(join(<1001809..1002168,1002210..>1002644)) /locus_tag="CRE_04838" /product="hypothetical protein" /db_xref="WormBase:CRE04838" /db_xref="WormBase:WBGene00055820" CDS complement(join(1001809..1002168,1002210..1002644)) /locus_tag="CRE_04838" /note="contains similarity to Pfam domain PF00702 haloacid dehalogenase-like hydrolase; contains similarity to Interpro domains IPR006439 (HAD-superfamily hydrolase, subfamily IA, variant 1), IPR005834 (Haloacid dehalogenase-like hydrolase), IPR011949 (HAD-superfamily hydrolase, subfamily IA, REG-2-like), IPR000223 (Peptidase S26A, signal peptidase I)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86800.1" /db_xref="InterPro:IPR000223" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006439" /db_xref="InterPro:IPR011949" /db_xref="PFAM:PF00702" /db_xref="WormBase:CRE04838" /db_xref="WormBase:WBGene00055820" /translation="MLSQFLRTTLRNYSTPPVLKVLSLDARDTLISLKESPSVVYSRF AKNSGLNIEPDYILENFLKHYKRMSSVSPCFGYNSGGSRAWWTEVVASTLMDVRSDIL TFLATSYVFQCSPNSDIKQLELTADNLYDYYATTDPWKLVEDRVKLSLQRLRLKGIVL VVTSNFDSRLKSLLAQFNLTDLFSMIILSGEIGFEKPDKRIYQLIVNHFELTHSSEIL HIGDNYKNDFLGAKSFGCRSLLFDPHCVSSIPSFDRISRLSNLKLY" gene <1003368..>1005074 /locus_tag="CRE_04623" /db_xref="WormBase:WBGene00055821" mRNA join(<1003368..1003422,1003469..1003551,1003597..1003700, 1003747..1003895,1003959..1004089,1004151..1004374, 1004757..1004822,1004873..>1005074) /locus_tag="CRE_04623" /product="hypothetical protein" /db_xref="WormBase:CRE04623" /db_xref="WormBase:WBGene00055821" CDS join(1003368..1003422,1003469..1003551,1003597..1003700, 1003747..1003895,1003959..1004089,1004151..1004374, 1004757..1004822,1004873..1005074) /locus_tag="CRE_04623" /note="contains similarity to Pfam domain PF01112 Asparaginase; contains similarity to Interpro domain IPR000246 (Peptidase T2, asparaginase 2); coded for by the following C. remanei cDNAs: DR775753, DT934556" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86752.1" /db_xref="InterPro:IPR000246" /db_xref="PFAM:PF01112" /db_xref="WormBase:CRE04623" /db_xref="WormBase:WBGene00055821" /translation="MSRPKIKPDCTELIAVHGGACAKYDPSLSEDCRYVCGTGSVEKA LTDFERIEKFNCGFGSHLTIDQEVECEASYMSSKNMSFGAVGAMSNVFHPSRVARHLA HSNWWKQRRLLHPLILVGRGAEKYAVKNDFPTCNPEELISNAAKDSYEKYLHRMLHPY DTHDTVGAISINTNTMEAESGTSSGGIVLKHSGRLGHSCVYGSGTWSERRQYEEPFDQ FSERTISICSTGHGESLVKADFCRGIATRVLDDEEGIMYSEIIREFIREKMEPSARFG GIALIVDKFKERMSLEFLIFHNCRYLPAAVRGRNNQIRVFESKFDPDNCTDDKFVIES FNM" gene <1005236..>1010941 /gene="Cre-dpy-28" /locus_tag="CRE_04624" /db_xref="WormBase:WBGene00055822" mRNA join(<1005236..1005324,1005409..1005626,1005706..1006132, 1006174..1006301,1006347..1006478,1006522..1007045, 1007099..1007292,1007346..1007435,1007512..1007617, 1007699..1008551,1008596..1009256,1009479..1009634, 1009681..1009953,1010000..1010086,1010134..1010212, 1010262..1010468,1010786..>1010941) /gene="Cre-dpy-28" /locus_tag="CRE_04624" /product="CRE-DPY-28 protein" /db_xref="WormBase:WBGene00055822" CDS join(1005236..1005324,1005409..1005626,1005706..1006132, 1006174..1006301,1006347..1006478,1006522..1007045, 1007099..1007292,1007346..1007435,1007512..1007617, 1007699..1008551,1008596..1009256,1009479..1009634, 1009681..1009953,1010000..1010086,1010134..1010212, 1010262..1010468,1010786..1010941) /gene="Cre-dpy-28" /locus_tag="CRE_04624" /note="contains similarity to Interpro domain IPR007673 (Non-SMC condensin subunit, XCAP-D2/Cnd1); coded for by the following C. remanei cDNAs: DR776286, DR779908" /codon_start=1 /product="CRE-DPY-28 protein" /protein_id="EFO86621.1" /db_xref="InterPro:IPR007673" /db_xref="WormBase:CRE04624" /db_xref="WormBase:WBGene00055822" /translation="MPKKQVRAAVAPVSPPRDDDMAAQRTLPSSGFKLIAELIAETDK NLPNDEIDRAIEDFSSFSDVSDWRGIPKYFLHLSSLSRRASTYDNWHNRFKVVDYLIS CFNSLKESVIEYIEDGFARNKTREPHEMDIDLIHSVNMFVILAQRLTVQLQLYVSKSN ATSGQPKTKNAKVRHALENDITKWKDVQRHRVSLYIIFALLNVCFQMINCLLELLELP VETVTGPKPAAIQYVFAPDIIEKDFTQRFMDTVSGLLEDPENAVRVNQPWITHFFRIW RVLANDYSMGTQIANSMFKDTLELAYLETSSTFPFIEPLVQLMKEGDDNNQPRINKPL YHVLEMIAHRACCLYSGDRADRPPPKAYCMIVQNLAVNCHDIMLHDVASVYKLLENPH PNVRMSTLQALADMFSSPYLSQSFCDNFEPRAKKRRTIFEKIVAHTNDEGTNVRAKAV ALLRNLMENRRIPEEFESSGFVTVVGSRLQDRSVQVRKATIQFLAAFLDNNRHGHDFN RAAHVEVLDQKSRELRLMNKPRLRVMQEAENTMTRRQFQLRSEIKDQLLALLSGETEL DGTAGRLDEVLQSINEDGAGARVARYYARSDRFPIHMNDPEHKEKHGLQLVDECVKFI LETLEGDYIHYKVQQLQMDDDQLLEDEQQARDRSHESLQLRAQMQQLIDKMCIEVELT KCVEMTLRCVLMGDSAEIKEGIKFLTRCKLFGISGADDAIRSMCCLVWRPAADIISEL IEAAENMFISRLEGNEKASERDKSTVENLMSAMKGVTERDRSSVEEVIYLLAAVELEP VIDDKSKPSRKRKTIESNVIAKLWNIALDTSVGNEERKAVALRILYPISKTEKGLPEA RSRLRSLQKKLVEGPVLAVEALRIISILGLPTKQEKDAHAYNKPIFRINPEDSLFRSI EQVFFHEVVKADDDPNRDWFGIMRYSISSILNISMDVNVVLPRLASQFLFRAKRITEF YIFYSNQANEATDANKTAVAARRRDYWALTWCRVMEKLMAFCGELAVQLHAFIQVNIP RLHNRYANKILDAEKNDSKAREEAARFLTDLEKSIAQRKTIFEVPQDLTPGTSSNTLH HLVALMCDKRMFVPNRLLGRLLPIIVYSLRANTMPLRVKQAALVAYGKYLPLSADISS FAAPSFFTAMMGSESTLVRCNLIAACCDFAFAQPTLFELYAPSLFRMSQDESPLARES TILVLSHLMSNDMIQTRGVLSEPARCISDSVRSVREAAESFFRELNQRSDTIIQLLPE FLYRLSSKTERLPMKAYKIVFEFLIQLLKEKSKSSSDTMIDRVCLKFSNIDMNDTEAP KYLLIALSKFAQSDGGLTRLQDNWRHWSKFLCQPQVAREFRHMVEHLQFSSKSEDFKN HCSELIANIDKIQEEGLRKEDITAAPAAAKRGGRGRKPAAAAVAKDSDDAPGPSTRTP KKRRRRAVSEESEESPAADSDFE" gene <1013177..>1019084 /gene="Cre-ptr-19" /locus_tag="CRE_04625" /db_xref="WormBase:WBGene00055823" mRNA join(<1013177..1013442,1013577..1013688,1013946..1014067, 1015334..1015414,1015468..1015580,1015747..1015936, 1015984..1016067,1016115..1016233,1016793..1017425, 1017472..1017887,1018015..1018131,1018176..1018328, 1018375..1018632,1018683..>1019084) /gene="Cre-ptr-19" /locus_tag="CRE_04625" /product="CRE-PTR-19 protein" /db_xref="WormBase:WBGene00055823" CDS join(1013177..1013442,1013577..1013688,1013946..1014067, 1015334..1015414,1015468..1015580,1015747..1015936, 1015984..1016067,1016115..1016233,1016793..1017425, 1017472..1017887,1018015..1018131,1018176..1018328, 1018375..1018632,1018683..1019084) /gene="Cre-ptr-19" /locus_tag="CRE_04625" /note="contains similarity to Pfam domain PF02460 Patched family; contains similarity to Interpro domains IPR003392 (Patched), IPR000731 (Sterol-sensing 5TM box); coded for by the following C. remanei cDNAs: DT934335" /codon_start=1 /product="CRE-PTR-19 protein" /protein_id="EFO86542.1" /db_xref="InterPro:IPR000731" /db_xref="InterPro:IPR003392" /db_xref="PFAM:PF02460" /db_xref="WormBase:CRE04625" /db_xref="WormBase:WBGene00055823" /translation="MRFDCVERRFAYAFGAYSGVVVRHPFPFFIIPVLVTAALTTGLF RHEQAFMKDELELYTPTDAQARKELDQLDRLFHINDSDPFYATRRYDIRRAGYIIVTN QEEDGDILNPLVMHAAMQLWSIVQSLTVEDEDDRRINYPSICVKFPIPPEFSKALHSL FSPNMTTPEEICVSNPLVEIFKLLLVSDRSFLNRSIDEMTLSQISDAIQFDSGGMTHL LGGVTLDDDKRIAGAKAMLLPYALRHSSDDEDWVAEKWEVRLADFLLQYDSPIIRASW WTYETLAAESARDRLQLINMLLPCFVCVSIYTIACCCVFSWRRSRPWLAIGGVISAAM AIASAVGLLLLAGYGMTSVAYSMPFIVFSVGVDNVFILLSAWRSTSSTETFEHRMKET FADAAVSITVTSLTDLISFGVGCATPFPSVKMFCAYAVAAVIFTYIYQLTFFAAVMVY TNRREVNNRHCITFHKLKRDTLPEKVAAQGDRSFEKNSMLAQFFRTTYSDLLLNPLVR ISILTFFCFYLVRFHSNFHLEKLSIFEGIASYGCTKVKLGLEPNDLLPENSYGKRTLM MAEKYFSDYGSSLHVWMYNLSEVNVVPRKIWNVLEKEIELYEHTEFTAGSDSWLRTFL AFVKQAGLLITPENFVYILKNVFLSQPQFAKYNRDVVLTENGEYLEASRIPVQLRHVG SANQSRAMRLFRRLAETSELQTGVYADFFQFAEQYNAVLPGTLSSIAYAGVAVVAVSL ILIPEPVASLWVSFSIVSINIGILGFMTFWSVRLDFISMVTIVMSIGFCVDFAAHLAY NFAKGENIDAPERMRNALYAVGAPILMSASSTIIGVSFMASAESYVFRSFLKTIILVI LLGALHGLVILPVLLSMFYCGGSSKAAKEHMDAVDQKLQAQYNNPARTASIQYLSNPD LYTLPPPPNIEYSLSTLEFNRTQTRPLGAPPPLSGSPKRELSGLSGPPEYEEHDPSGL STFGVAPAVVANTTGMIPMRAKLKYPTSMTTAQRRESENRSTPELYYPS" gene complement(<1019420..>1021121) /locus_tag="CRE_04839" /db_xref="WormBase:WBGene00055824" mRNA complement(join(<1019420..1019477,1019525..1019742, 1019783..1019938,1019982..1020083,1020126..1020288, 1020337..1020700,1020742..1021036,1021086..>1021121)) /locus_tag="CRE_04839" /product="hypothetical protein" /db_xref="WormBase:CRE04839" /db_xref="WormBase:WBGene00055824" CDS complement(join(1019420..1019477,1019525..1019742, 1019783..1019938,1019982..1020083,1020126..1020288, 1020337..1020700,1020742..1021036,1021086..1021121)) /locus_tag="CRE_04839" /note="contains similarity to Interpro domain IPR000210 (BTB/POZ-like); coded for by the following C. remanei cDNAs: DR406836" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86712.1" /db_xref="InterPro:IPR000210" /db_xref="WormBase:CRE04839" /db_xref="WormBase:WBGene00055824" /translation="MSSFEIIDPKKPVEENKLPNGVELLQHEVNAFSNHYSNGKSFDD LEKKSIETGTEPGIHFGIDFKLHPDAVKKLDSIGQQVHSNACILQHNLVMYSFVYGLS VVGENETEGLFCKLSIAPISYTYKYPTEMAKGGVQITFKPEVPELKEVKWVHEDGTAD DLFKEDNGHYSCVSMIPLKSLNEFTEVFIMISSCLNMFLLIIIVQNGCAVLRVEMTID KEYFDIQKYIDLDIKEAYVAPNSYKILDKILMGEQVPKSDWVISASEGFPRDFHVHGP VLADSSYALRAAVTSHMCISKEIAMISHENRFVVTSLKSKDMRVILTYIYHRRFVLPE FDAVSRIGKVLSLLFKDDILKFFESWNAKIIKNLRKLDRSDSLKTIAECVKALICVTS APQGSLLGVYNVALIVAADAWQMTEIKGKKLKKEKVKKEIGKPWTVIDDILELIDDFK TVVCGVEKMEFIE" gene complement(<1021355..>1023644) /locus_tag="CRE_04840" /db_xref="WormBase:WBGene00055825" mRNA complement(join(<1021355..1021459,1021505..1021597, 1021678..1021842,1021890..1022189,1022234..1022479, 1022524..1022669,1022717..1022983,1023524..>1023644)) /locus_tag="CRE_04840" /product="hypothetical protein" /db_xref="WormBase:CRE04840" /db_xref="WormBase:WBGene00055825" CDS complement(join(1021355..1021459,1021505..1021597, 1021678..1021842,1021890..1022189,1022234..1022479, 1022524..1022669,1022717..1022983,1023524..1023644)) /locus_tag="CRE_04840" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily; contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1), IPR005829 (Sugar transporter, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86758.1" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="PFAM:PF07690" /db_xref="WormBase:CRE04840" /db_xref="WormBase:WBGene00055825" /translation="MWFDINRFHLLVLLTWQFSIFFASQQIFPIFSNYVPQWKCGNGE PSSDCAVYETCKSNLTFVNVAFKSAAMEYDWICGKSAYLKSLFSQIQFAGVLCGTFSF GAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQLLLGIRFFLGLSVGGTLVVVCTFV MEMLLPKQRMALRAFFNWGVARLMMTLIAMALPEWRISSIACAIAALPALLIIIFVFP ESPTWLHNKGKLEQMKKSEKHIAKMAGVPYIPVEHQKIEHSKTIREMLQTKGLMRRLF VLWSMWFVASICGYATDLNSNTISGDLFVNQILFSILIAVSKMILVIFDTHVPSFRRR TLHQGAQLVVCLCFLLLTFMTFYGYTGLAFLIVNLIGTVFIEYTWDACYLCAVESMET ACRASATGTCSLVARIGAILAPMLNYANLWWPPSVYLTVVLLGTINLIISYFFLVETK NVNLDNVHIDSSSEEGTPMIDEKPSQKSDQ" gene <1029234..>1031898 /gene="Cre-klp-7" /locus_tag="CRE_04626" /db_xref="WormBase:WBGene00055826" mRNA join(<1029234..1029347,1029498..1029699,1029750..1030261, 1030305..1030555,1030602..1030848,1030926..1031140, 1031186..1031497,1031545..1031722,1031770..>1031898) /gene="Cre-klp-7" /locus_tag="CRE_04626" /product="CRE-KLP-7 protein" /db_xref="WormBase:WBGene00055826" CDS join(1029234..1029347,1029498..1029699,1029750..1030261, 1030305..1030555,1030602..1030848,1030926..1031140, 1031186..1031497,1031545..1031722,1031770..1031898) /gene="Cre-klp-7" /locus_tag="CRE_04626" /note="contains similarity to Pfam domain PF00225 Kinesin motor domain; contains similarity to Interpro domain IPR001752 (Kinesin, motor region)" /codon_start=1 /product="CRE-KLP-7 protein" /protein_id="EFO86540.1" /db_xref="InterPro:IPR001752" /db_xref="PFAM:PF00225" /db_xref="WormBase:CRE04626" /db_xref="WormBase:WBGene00055826" /translation="MIAVGMHVEIKRSDGRIHGAVIAEVKSNGRFMVEWYEKGETKGK ESSLDELLKLNPTLQTPKPTPVQPPPPQKTLQTSTAVNRMNTNMQNMLLDEDDTFLLD HIKNTATNKRQSGLFNVPLRSSSPTEKPAAPVRRAPSPTEKMASTRRATSPTERAVRR APSPKTEKFAVPAAPKAPSARSVLAPNVNSSSKLESHPTVTPAPAEVPKQTSRRSVMP QPAAPPPAPVNMNTQRAPSPVARAPSPKNGPRSYPQQEVSPSNGNFAFAEMIRNYRAQ IDYRPLGMFDSVNENRISVCVRKRPLNKKELTKNEVDVITIPSRDITILHQPQTRVDL TKYLDNQKFRFDYSFDEYANNELVYRFTAAPLVKTIFDNGNATCFAYGQTGSGKTHTM GGDFSGKKQNASMGIYALTARDVFRMLELPQYRRKDLSVHCAFFEIYGTKTFDLLNEK AELRVLEDKMQKVQVVGLKEEQAMNEGDVLELINKGTLVRTAGTTSANANSSRSHAIF QIILRQGKKIWGKFSLIDLAGNERGQDTRECDRDTRKEGANINQSLLALKECIRGMAR NSSHVPFRQSKLTMVLRDSFIGDKSRTVMISMISPGISSSDHTLNTLRYADRVKEMGA DGSGEATPIRDEELFIPPSLDKSDDDYDEATEKQEHRRLAADHFRNLKDMTEKLSRES ITVLSTDASAAQKAECLAKLDQLAQIISNTRAAVENV" gene complement(<1032150..>1033801) /locus_tag="CRE_04841" /db_xref="WormBase:WBGene00055827" mRNA complement(join(<1032150..1032269,1032318..1032548, 1032595..1032658,1032703..1033235,1033290..1033409, 1033458..1033754,1033766..>1033801)) /locus_tag="CRE_04841" /product="hypothetical protein" /db_xref="WormBase:CRE04841" /db_xref="WormBase:WBGene00055827" CDS complement(join(1032150..1032269,1032318..1032548, 1032595..1032658,1032703..1033235,1033290..1033409, 1033458..1033754,1033766..1033801)) /locus_tag="CRE_04841" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86541.1" /db_xref="WormBase:CRE04841" /db_xref="WormBase:WBGene00055827" /translation="MSVRLSIFCRKSLKNGSTTSIPTTVLVTPSTALPTSNSTVSISS TSSSINSTDELPICSPYLLRNGTTVSKCAFSLKIPPATHKYIGVFIIFCFIFGQTIHY FYLEEKKARELKESAEVEMNPNQEPIDEHNAEQEEDRRVRLAYGMPTNTYLVEESKTP AGKVTTVFEKRHKPIPHIITPAPGATSINGLYESRTKTVKKEEAMICQIHITADKWGR GKELISLINDTDVPPTLGSSEEKAKYAMELVQQHVEKMTEQKVFLHGFLEERTRILCG SESLESEVFSEVRLELKLEMTEPVHLLMSVFSVKVEPQIVEQSKTGLPARVSELTSIP NKETPKAEVPPTPRSFKKGKSAATNSLEEKQQGSSSRPSKITIASADKRERRDSSKRR GSKKSSDLSQLVPLLQQVQSIQGIEKAPKERQRTPKESPIPATPEKPSSGQMPPVVKK KKKESTSGQGSNSLPS" gene complement(<1035189..>1039190) /gene="Cre-sca-1" /locus_tag="CRE_04842" /db_xref="WormBase:WBGene00055828" mRNA complement(join(<1035189..1035485,1035531..1035880, 1035929..1038005,1038045..1038170,1038601..1038815, 1039029..1039110,1039158..>1039190)) /gene="Cre-sca-1" /locus_tag="CRE_04842" /product="CRE-SCA-1 protein" /db_xref="WormBase:WBGene00055828" CDS complement(join(1035189..1035485,1035531..1035880, 1035929..1038005,1038045..1038170,1038601..1038815, 1039029..1039110,1039158..1039190)) /gene="Cre-sca-1" /locus_tag="CRE_04842" /note="contains similarity to Pfam domains PF00690 (Cation transporter/ATPase, N-terminus), PF00689 (Cation transporting ATPase, C-terminus), PF00122 (E1-E2 ATPase), PF00702 (haloacid dehalogenase-like hydrolase); contains similarity to Interpro domains IPR008250 (E1-E2 ATPase-associated region), IPR005782 (Calcium ATPase), IPR004014 (ATPase, P-type cation-transporter, N-terminal), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR006068 (ATPase, P-type cation-transporter, C-terminal), IPR005834 (Haloacid dehalogenase-like hydrolase), IPR000886 (Endoplasmic reticulum, targeting sequence); coded for by the following C. remanei cDNAs: DY528229, DR778922, DR781219, DR409584, DT935792" /codon_start=1 /product="CRE-SCA-1 protein" /protein_id="EFO86897.1" /db_xref="InterPro:IPR000886" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR004014" /db_xref="InterPro:IPR005782" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006068" /db_xref="InterPro:IPR008250" /db_xref="PFAM:PF00122" /db_xref="PFAM:PF00689" /db_xref="PFAM:PF00690" /db_xref="PFAM:PF00702" /db_xref="WormBase:CRE04842" /db_xref="WormBase:WBGene00055828" /translation="MEDAHSKDAEEVCKFFGTGPEGLSEQQVETLRKKYGENELPAEE GKSLWELILEQFDDLLVKILLLAAIISFVLALFEEHEDQTEAVTAFVEPFVILLILIA NATVGVWQERNAESAIEALKEYEPEMAKVIRSGHHGIQMIRARELVPGDLIHFSFSVG DKIPADLRLVKIYSTTIRIDQSILTGESVSVIKHTDSVPDPRAVNQDKKNCLFSGTNV ASGKARGIVFGTGLNTEIGKIRTEMAETENEKTPLQQKLDEFGEQLSKVISVICVAVW AINIGHFNDPAHGGSWVKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKN AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSKMFIAGNASGDNINFTEFAISGST YEPIGKITNNGREINPAAGEFESLTELAMICAMCNDSSVDYNESKKQYEKVGEATETA LIVLAEKLNVFGTSKAGLSPKELGGVCNRVIQQKWKKEFTLEFSRDRKSMSAYCLPAT GGSGAKMFVKGAPEGVLGRCTHVRVNGQKVPLTSAMTQKIVDQCVQYGTGRDTLRCLA LGTVDTPVSVSSMNLEDSTQFVKYEQDITFVGVVGMLDPPRTEVMDSIKACNHAGIRV IMITGDNKNTAEAIGRRIGLFGENEDTTGKSYTGREFDDLPPEQQSEACRRAKLFARV EPSHKSKIVDILQSHGEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSASEMVLAD DNFASIVSAVEEGRAIYNNMKQFIRYLISSNVGEVVSIFMVAALGIPEALIPVQLLWV NLVTDGLPATALGFNPPDLDIMDRHPRSANDGLISGWLFFRYLAVGTYVGVATVGASM WWFLLYEEGPQITYYQLTHWMRCEIEPDNFADLDCAVFEDNHPNAMALSVLVTIEMLN AINSLSENQSLFVMPPWKNIWLMAAITLSMSLHFVILYVDIMATIFQITPLNVVEWVA VLKISLPVLLLDEILKFIARNYIDGKPETTGAKARSAISLIAWVSVTLAYFAWMLGPY AELINHALVGPSVDPSKFDTIAAEKHNEL" gene <1051185..>1053126 /locus_tag="CRE_04627" /db_xref="WormBase:WBGene00055829" mRNA join(<1051185..1051292,1051353..1051508,1051557..1051656, 1051703..1051865,1052056..1052240,1052291..1052485, 1052676..1052796,1052841..>1053126) /locus_tag="CRE_04627" /product="hypothetical protein" /db_xref="WormBase:CRE04627" /db_xref="WormBase:WBGene00055829" CDS join(1051185..1051292,1051353..1051508,1051557..1051656, 1051703..1051865,1052056..1052240,1052291..1052485, 1052676..1052796,1052841..1053126) /locus_tag="CRE_04627" /note="contains similarity to Pfam domain PF00090 Thrombospondin type 1 domain; contains similarity to Interpro domains IPR000884 (Thrombospondin, type I), IPR001212 (Somatomedin B)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86614.1" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR001212" /db_xref="PFAM:PF00090" /db_xref="WormBase:CRE04627" /db_xref="WormBase:WBGene00055829" /translation="MRQFLFLSLLFAIPYSCRAGCYQRRLCCSGRNNTCKGVDDGISH LPTVSTIHNEEAQTFHQRPIRVEKEYYSPHYESSGDGYDFIFPDVFDGESDEKIGKLV LPDIIEMEGSGVDKVYQKYGLGSGDGEPESVKEIPLTTPAPKLKTLIFGQKRDQRTPP EEITRYSEKPKHLLIRYSLLSKYMPLKVTSTPLLYEENRVQSANNLYYLESSISECYC DEHCVALGDCCSDYTFVCPPRDCVLTDWDQWSKCSADNGICGIGTQKRLRHVIQNAER GGAACEPLKEMKTCFVECRPTKSALDDLTTVALILDYKYNQTRSKFGRNNIYWDLPKI AEKVKKASFYCVHYSIEWVNRNCVSRLLNKGLAEGSVMCAECQPEATYHRNNGRCASD LEDGDQGFWKLIGPQSCNGIWTRINRTEHCQCQNKYPDNHPFLLV" gene complement(<1053477..>1055538) /locus_tag="CRE_04843" /db_xref="WormBase:WBGene00055830" mRNA complement(join(<1053477..1053598,1053644..1053818, 1053863..1054547,1054595..1054699,1054745..>1055538)) /locus_tag="CRE_04843" /product="hypothetical protein" /db_xref="WormBase:CRE04843" /db_xref="WormBase:WBGene00055830" CDS complement(join(1053477..1053598,1053644..1053818, 1053863..1054547,1054595..1054699,1054745..1055538)) /locus_tag="CRE_04843" /note="contains similarity to Pfam domain PF03372 Endonuclease/Exonuclease/phosphatase family; contains similarity to Interpro domain IPR005135 (Endonuclease/exonuclease/phosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86738.1" /db_xref="InterPro:IPR005135" /db_xref="PFAM:PF03372" /db_xref="WormBase:CRE04843" /db_xref="WormBase:WBGene00055830" /translation="MGFIQEESVPRPQSKRRTMLLPSNRVLLWKTEDPVKEKDKKKQS QTGLNMMFKFTYEDIPYIVKTQKAFELPLSVALSKACAEYIYPVNSKIIFQISVLMKK KVFKDKADTSENGISIKLDSQSEIDDTASISTLADNLEIETLLINEAEFRIVRNGIPI SSVTLALTPIANQYCMPTIVFNKKKSVQSHWFVKTEKQKESSEKIAPTKKDVDSLYLS FSNEERREYSLEGYSFKHKGEYFSPDPTDSGRLVAVVVDTGVDNPVYAAISSRPINEP LEDVITDDQVKWCRVNKLNKDKDVVRIMCYNILADLYLNLNLEQNELFFNYCPKANQR VFYRTPIFLKQMKDFIDSQVSIFFLQEVDLRRHENYIDPFLKTLNYSSEISKKGGQIS EGVAVVFDQTRYRTIYSDSFLLADLVEKEEVNSDIRRILESSAESETRFKTRPTIIQI VMLEDVETGVILVCGNTHLHHNPKDEHIKVLQALTCVRKLMKMFNEMKESEPERKCRL IFGGDFNSTPDGAVFQMMSNRFLPNDHKVWECDEKIDAEDILIEKKMSCLTGTPEYTN YTASSQKEGFVGCLDYIWGIDVESIRICPSPDHKKVIKYTALPSRISPSDHLPVICDI KL" gene <1056373..>1058492 /gene="Cre-hex-3" /locus_tag="CRE_04628" /db_xref="WormBase:WBGene00055831" mRNA join(<1056373..1056510,1056628..1057776,1057827..1058177, 1058238..>1058492) /gene="Cre-hex-3" /locus_tag="CRE_04628" /product="CRE-HEX-3 protein" /db_xref="WormBase:WBGene00055831" CDS join(1056373..1056510,1056628..1057776,1057827..1058177, 1058238..1058492) /gene="Cre-hex-3" /locus_tag="CRE_04628" /note="contains similarity to Pfam domain PF00728 Glycosyl hydrolase family 20, catalytic domain; contains similarity to Interpro domains IPR015883 (Glycoside hydrolase, family 20, catalytic core), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)" /codon_start=1 /product="CRE-HEX-3 protein" /protein_id="EFO86699.1" /db_xref="InterPro:IPR013781" /db_xref="InterPro:IPR015883" /db_xref="PFAM:PF00728" /db_xref="WormBase:CRE04628" /db_xref="WormBase:WBGene00055831" /translation="MFRGFFGRRSRSVWVRLTYLCIVTIIFLFATSQFKGTATHARFV PEPIQPVHSIDRAADPRIPLNLEPPNLKQKEVDERLNLDVHNPTRNAKLSTRKLTTEQ KTTKPAQNIIINGEKYPKLTPDGKLIPQRRIVHLDLKGAPYKPQYFTELFAFFNRIQA TGILLEWEDMFPFKGRLAGAVNKNAYSMETVETILKEAQKHHLHIIPLVQTMGHLEWI LKLEQFSHLREDARFPQVICFSDDDAWDLLKEMIEEVAEVHKKYGMPFFHIGADEAFQ VRYFKHGFKHPILLQIGICNASVTRIQKEYSKERLMLWHIARTAEFVKETYSDTQVLA WHDMLISAMESDIEDYKLTELIQPVLWNYAEDLDVYLPRSTWMMLRNFGSVWGSSAWK GADGPARYSTNANHYVKNHESWIKQYTMAYQDFNVFEGLIMTGWSRYDHFSVLSETIP VALPTLAISMETILEGRPLLSNHPVTAELLQCSPPLDLGFTASGCRFPGSRIYELVND MYQKQMQLRTYRQDDYELNGWLSRVSDEYSVSSHWYIDKIEQMIEMHAAPLERIAEDL RFEMEKIFFKDMIDEFLFTYLGEDLEWLNKKRATIKTISTSKKFPKRPFVESAISRSS VSAKCR" gene <1059433..>1059873 /locus_tag="CRE_04629" /db_xref="WormBase:WBGene00055832" mRNA join(<1059433..1059547,1059593..1059715,1059761..>1059873) /locus_tag="CRE_04629" /product="hypothetical protein" /db_xref="WormBase:CRE04629" /db_xref="WormBase:WBGene00055832" CDS join(1059433..1059547,1059593..1059715,1059761..1059873) /locus_tag="CRE_04629" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8P4A9" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86741.1" /db_xref="WormBase:CRE04629" /db_xref="WormBase:WBGene00055832" /translation="MPSGSDEVNHLSALDQFVAPGLRLWMLIALVGGVLLIMIVIVCC FMRIRIPRTKRQIDLIAAKRKLRKSNKTSTDGNAHNDERAQAIVMNSMPSGGGGGAST SSSRHTGSRLQSQV" gene <1060103..>1063890 /gene="Cre-oxi-1" /locus_tag="CRE_04630" /db_xref="WormBase:WBGene00055833" mRNA join(<1060103..1060248,1060315..1060447,1060471..1060833, 1060884..1061541,1061585..1061856,1061903..1061994, 1062091..1062209,1062260..1062377,1062427..1062830, 1062875..1063223,1063265..1063423,1063470..>1063890) /gene="Cre-oxi-1" /locus_tag="CRE_04630" /product="CRE-OXI-1 protein" /db_xref="WormBase:WBGene00055833" CDS join(1060103..1060248,1060315..1060447,1060471..1060833, 1060884..1061541,1061585..1061856,1061903..1061994, 1062091..1062209,1062260..1062377,1062427..1062830, 1062875..1063223,1063265..1063423,1063470..1063890) /gene="Cre-oxi-1" /locus_tag="CRE_04630" /note="contains similarity to Pfam domain PF00632 HECT-domain (ubiquitin-transferase); contains similarity to Interpro domains IPR000569 (HECT), IPR000048 (IQ calmodulin-binding region)" /codon_start=1 /product="CRE-OXI-1 protein" /protein_id="EFO86911.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR000569" /db_xref="PFAM:PF00632" /db_xref="WormBase:CRE04630" /db_xref="WormBase:WBGene00055833" /translation="MDNILRTLEKNAREREGEETQRRRVELAEKLEPYIRGYLIRKKY QGKFKFFRPNFFNDFENLEKNNKTLLTVTEMLAKAPKVIESAKTQKDTKRSNKKLQLL CNICRHIIISIDSTSKDISFVAAFLSKDTIKEATNLITSIFSQIPSILSSINSEKAVE LKHWQCLIHFVIVFSSSSTWPLVRNATQVHPVLNGLCVKMMSIFYEQKNYEQLASSLF VAVNGHKPIINVETVNAQFSILYRPLKTSSPETPELFSICVLKVFTCPALLLHLNQQN IEQIKSSQLFEKTLCWLRINQEEIESGMDVRLLINLLANLVHFAYIDDQTLQSKIYEW TWAVGTSLSRCTELTVKHGEGKTSLQYWHPVFGHYLLPIDKRTEGALRNVLYQLKMLW SSRVVKCLFGKIMENKTLSPCSSCDSQSVSKNQKDISAAFSKLWRKLGGTIDSVTSSK SECEPPPNLIAIVCQVYMTALSTMVHMKGEIVSGLCRDDQLLKQLWLYLKEWGEKYGS SSGLLFNSSNAEQFGPVSASLLSLKRPTSPHTATLRLFVDCASAIISILDEEEIFEKG TPFSNKELESICKYVNVFCFRAIWSGAVDETTSNSTGLFQSMHSLLTILYERDSRRSF TNDPRFWLISEVKPSSVTIEYEKKSGKGILMMRKMAHLVPIKDRMLLFRRQVQDDKNG VASSINDSQMQTWITVQRNRIIEDGFNHLSKLTIPALKSTIRVKFVNEQGLDEAGIDQ DGVFKEFLELTLKKVFDPQLNLFSTTSTGVLYPSPTSSLHDDHLALFTFVGRMLGKAV YEGIVVDVQLAPVLLAAVLGCHRLCAFDELSQLDPELYRSLTFVKRYEGDMVDLSLTF SVDEDFMDKISTVDLVPSGRTIAVTNENKIDYVHRMAHHRVFRRTQEQCKAFVSGMQS ILQPSWLSLFAPNDLQCLISGVNSDIDLSDLKRNVQYFGGFHGNHRLIKWLWDILENK FTSEERKLFLKFVTSCSRPPVLGFSYLEPPFSIRCVEVSDDQDQGDTLGSVVRGFLAL RKGTAASRLPTASTCFNLLKLPNYNKKSLLLEKLRYAIHAGTGFELS" gene complement(<1064238..>1065197) /gene="Cre-cey-4" /locus_tag="CRE_04844" /db_xref="WormBase:WBGene00055834" mRNA complement(join(<1064238..1064460,1064507..1065101, 1065146..>1065197)) /gene="Cre-cey-4" /locus_tag="CRE_04844" /product="CRE-CEY-4 protein" /db_xref="WormBase:WBGene00055834" CDS complement(join(1064238..1064460,1064507..1065101, 1065146..1065197)) /gene="Cre-cey-4" /locus_tag="CRE_04844" /note="contains similarity to Pfam domain PF00313 'Cold-shock' DNA-binding domain; contains similarity to Interpro domains IPR012340 (Nucleic acid-binding, OB-fold), IPR011129 (Cold shock protein), IPR002059 (Cold-shock protein, DNA-binding); coded for by the following C. remanei cDNAs: DR777491, DY524758, DR779508, DT936628, DR408097" /codon_start=1 /product="CRE-CEY-4 protein" /protein_id="EFO86615.1" /db_xref="InterPro:IPR002059" /db_xref="InterPro:IPR011129" /db_xref="InterPro:IPR012340" /db_xref="PFAM:PF00313" /db_xref="WormBase:CRE04844" /db_xref="WormBase:WBGene00055834" /translation="MSTEQANGKTVEEKKDKVAEVTEKLDNLAVDNTNEANENGPARR GGRGFRGRGRGRGRGGRTATTRFQPRPPYDEQVKQIEEDLKSKKVLEKGVNGIVKWFS VRGRYGFVARASDEKEDFFVHQTAIAKSSTIKYYLRTLDDEEPVVFDIVEGRKGPEAA NVTGPDGENVRGSRYARSLLTRFGGQRRGGARASGGRKPREASGDDKEKPAAPEESGD GETRGKRRPRRARGKLQPDAEIGEKSQEKGNGDGAPVVEGEKKVRRRRNIKGKKEAGD ATEQNQEAAPTKA" gene <1066387..>1070053 /locus_tag="CRE_04631" /db_xref="WormBase:WBGene00055835" mRNA join(<1066387..1066464,1066508..1066735,1066780..1067213, 1067262..1068396,1069039..1069280,1069329..1069914, 1069958..>1070053) /locus_tag="CRE_04631" /product="hypothetical protein" /db_xref="WormBase:CRE04631" /db_xref="WormBase:WBGene00055835" CDS join(1066387..1066464,1066508..1066735,1066780..1067213, 1067262..1068396,1069039..1069280,1069329..1069914, 1069958..1070053) /locus_tag="CRE_04631" /note="contains similarity to Interpro domain IPR001220 (Legume lectin, beta domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86631.1" /db_xref="InterPro:IPR001220" /db_xref="WormBase:CRE04631" /db_xref="WormBase:WBGene00055835" /translation="MERFKEQIAKRVNQIGEQFSSDNDVKVMLDNMSDRVGSSYDAPS TSDETDEPIAPLNSSSQNSSPKKLIKAKVSEEEEIINSIDAAYFIDNNEFDAIDYELK KLCDIEMCYEDIQRERFRLKSQHTVVSKQISTLIMQKSSSYTAQVGEMEKIRDDVGDV IEEILSIRKALSLATEQTRTCLGLIANEKKKNVLNTLKTTLTTIKSFYEAENHIRETI NEGNFPLAIQMLIETQIRAVEYSEFTCVSDVSSKLREMSCLLETELAAQLSTIAVVFD SEKYRCFFTAYEMLEKSDLVAQKLLAAFTEAIETTTTAVILDKMRESDRQEDATYTSL CLKLDSEQASITFREMGFVLCRSFHAYHKILQFHSSESASETSQKIYKNLLSSRADVF LSATKRLLVLVESRDFVSLKFEHILDIVDSINRFNNIGKTYFACYQLKLGESIEKRTE IYFERYHMERMEELYMFIENESFTLCPVPFQFTIFDLQDFEFLKESRQEFDNMNKTEE AAENNVETSVELIKNDWQNPFCQAAIRSRIQSSYSQKSSDERSYSTSSAPENFKSHES FSEDPLDEPVGAPTPNLCNTALNLLRFFGRYLRMTALLPTLCAKSAPAIIDLYEFFFA SICHIFGSEGAEFIGRIPRLVSCLDGISKKFSKNCEGSSPFRKVFQKDDDGKIYPNLS PAVQIAFIDNLYGACERIIAVNSIEFVARQLDLIRPVIESLLLEDVRDSLSVSLDIFY SQVLPCQSDAKVLIVDASASRSLRLKSLVENVSSVKWDIGELKSDHNLYVELLIQDYE LFSIRLNSIKENGSVSLSESMENFFWNRAIYYSFKALVQGYGDGGKCSTEGRALMQLD FQNILLKLEPLCGIKPIPHANFVDSYIKAYYLPENGLEQWIKTHSEYSSKQLSSLLGA AAHVSKKARLRILDALKD" gene <1070339..>1072113 /locus_tag="CRE_04632" /db_xref="WormBase:WBGene00078744" mRNA join(<1070339..1070361,1070820..1071010,1071161..1071939, 1071985..>1072113) /locus_tag="CRE_04632" /product="hypothetical protein" /db_xref="WormBase:CRE04632" /db_xref="WormBase:WBGene00078744" CDS join(1070339..1070361,1070820..1071010,1071161..1071939, 1071985..1072113) /locus_tag="CRE_04632" /note="contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86718.1" /db_xref="InterPro:IPR000276" /db_xref="WormBase:CRE04632" /db_xref="WormBase:WBGene00078744" /translation="MSLRNQKGGLPTVNDPVFNDYSPPAHIPFSGAKLNTNNNNNNGS NNKKNHQNLKSGKSKYCTPKRDNNRSPGGTPVNNHNAMRPFQLVSPLPFAMNSVPIRG IRNDEGVVKYPLLLCSQEGTLMISMAAGVIVELCLDRSFRVVCNTDFMAYVNSNGSVS SILHKYAKIVHGKEHVHCKFVNSNDRVAVLGPEGILFSMDSLSEAYLLSGANESGPSA IALEKPEFPIQNMDYTIQQMYGESDIGVDVRDADKKKMVMVFQNMEKCKTVMQKAQYE KYADGTLVVHINGMLLKSNSQTGDVTIEAKPIKLSVNPINLTAQLRSTHIDMAIQDKD KCYVKRGDKRIHTSRSGMVVSDGTCTISMDQLGRILACS" gene complement(<1072398..>1073500) /locus_tag="CRE_04845" /db_xref="WormBase:WBGene00055836" mRNA complement(join(<1072398..1072581,1072651..1073267, 1073315..>1073500)) /locus_tag="CRE_04845" /product="hypothetical protein" /db_xref="WormBase:CRE04845" /db_xref="WormBase:WBGene00055836" CDS complement(join(1072398..1072581,1072651..1073267, 1073315..1073500)) /locus_tag="CRE_04845" /note="contains similarity to Brugia malayi Hypothetical 35.9 kDa protein C05B5.4 in chromosome III, putative.; TR:A8Q701" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86553.1" /db_xref="WormBase:CRE04845" /db_xref="WormBase:WBGene00055836" /translation="MFRSTTITSSFTLISLILNINYVHADMWIHVNVVSIERKACPID ETSWGTETSGCASMSYMTLDERILPHHERRSSSFEYVNGIARPTVTHWPKGRLADWMV SIQFISVDPVYGLARTCDRSGYIRVFQNETFNWEREFSEKTLEVSVNLWHHFREAIQF LQIQGQCFIASVKVQASNEVCPWCVDDSKTTTKTTTTEIPSTDSPAAFLSFDSSNTSV LIVMSILASFSFLALTATTILLIVYIMDRKKPEYFDMPPPQANSTVLARNDQIGLFTT KSSERWTEYGSEAWASFQPLNVEAAFISPRDTCVYRVTQEEDDSSDSGNASL" gene <1076104..>1081558 /gene="Cre-athp-1" /locus_tag="CRE_04633" /db_xref="WormBase:WBGene00055837" mRNA join(<1076104..1076169,1076218..1076278,1076325..1076404, 1077345..1077695,1077854..1077960,1078244..1078518, 1078569..1078886,1079160..1080002,1080059..1080246, 1080293..1080876,1080927..1081336,1081383..>1081558) /gene="Cre-athp-1" /locus_tag="CRE_04633" /product="CRE-ATHP-1 protein" /db_xref="WormBase:WBGene00055837" CDS join(1076104..1076169,1076218..1076278,1076325..1076404, 1077345..1077695,1077854..1077960,1078244..1078518, 1078569..1078886,1079160..1080002,1080059..1080246, 1080293..1080876,1080927..1081336,1081383..1081558) /gene="Cre-athp-1" /locus_tag="CRE_04633" /note="contains similarity to Pfam domain PF00628 PHD-finger; contains similarity to Interpro domains IPR001965 (Zinc finger, PHD-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type); coded for by the following C. remanei cDNAs: DY528999, DR780250" /codon_start=1 /product="CRE-ATHP-1 protein" /protein_id="EFO86798.1" /db_xref="InterPro:IPR001965" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00628" /db_xref="WormBase:CRE04633" /db_xref="WormBase:WBGene00055837" /translation="MQRKEKEAKKKLKYDSTDGLLLEIRRMCGYPEQTVEEERSPRVS LSGKKKKQIEEEWKWIEAQLCGLCSIGGDILCCETCPASFHLSCIGIEASEVPDGAFH CHRCTSLPTDVQLFAPETCTSTTPQHRVGYEFYRNWEAIRWQYKRLKKEPTKPVQGPL TEMDSIDNTFPDCHLKNSLTLINSLNYSFPSRYTDAVKKYPDDSMEVKRSYKAGETCV QCELQDDWSPMLLCDFCEQAWHQKCVYPPMITMPKRNYWMCPRHTAVRIDNLVLGEEL TRNERNVLIEKYGEPEVSFELFEKFCNATIERRIGCNDNLDVIYYAPVREEVASCVSP VLIHKKNNWRKGGRGKKKAESRYFDTSYGLEDIPDAFSSSSLKNLRKISDNTLVERKD RVLDQLDQKRSQQLTEDELLSTIMPYDEVIKMMRGDLDPKETIRGSGIQSICTLPDKI YRKKLKADIDLLIQFLGFGNDHDERKFSSFQTEAFFRRCTPPPSAQNTLCQKSLREVL LNSQKEALELSQVYKYHPDSKKIDHFVLLAHDIYFESAEERDSYFPSSMTIWSKEPIM ALTAKWAKQSCVKIKEESPAEPVDDKMVDGGINAIVASINETTSSGPILGPGSSEVIA AHYVVDPAELESTGRALESNEPQGPLYASSQHSSLQSPQQSSQQSPQQAYLNIEFKED GPNIAQYINDSGPLEQNIAEAVGRLSLDNFEDLKYNDYQEKAVSIYEYPGYLGEDDWY EADVRRAKSLNDLVDKPIWSHVNKNMQNFLLREQIETMQFDHDYAAIDRRQISDDSVP NDLHNYISSESVKDRYEYEERESQSPDTEFLSPNPPDGYENYDIRRRGRPKGSKNRKE GEPIRPRKKYPTSSSGRSRGRGGRPRSIRGSRGTPSAASSFDEEGPSRRQSVTFSSDA PDSPEQSIASVSKRIQEEVDEAREKYAKLMLTKNLEEDKDTYFSTRNDALESWTAEQR KELTKRVITGRLSSLIPFEARYFLPSQRVLARVEIDDYHLSIAIQRCLTKIGTAQDCH IRIDKLADSFCNDLADYHCDIIREYHSNDFYLSTLATEMVIVNDVVICRPRLTHFEEA ERNRSNGSIPFIPSNIRCQCRKRSDQQISNLENNGQVITSGIVKLEDGALIQIGCVAF KFFKNS" gene <1082100..>1084181 /gene="Cre-com-1" /locus_tag="CRE_04634" /db_xref="WormBase:WBGene00078726" mRNA join(<1082100..1082630,1082684..1083035,1083077..1083348, 1083394..1083450,1083567..1083926,1083993..>1084181) /gene="Cre-com-1" /locus_tag="CRE_04634" /product="CRE-COM-1 protein" /db_xref="WormBase:WBGene00078726" CDS join(1082100..1082630,1082684..1083035,1083077..1083348, 1083394..1083450,1083567..1083926,1083993..1084181) /gene="Cre-com-1" /locus_tag="CRE_04634" /note="contains similarity to Homo sapiens Retinoblastoma-binding protein 8; ENSEMBL:ENSP00000323050" /codon_start=1 /product="CRE-COM-1 protein" /protein_id="EFO86554.1" /db_xref="WormBase:CRE04634" /db_xref="WormBase:WBGene00078726" /translation="MSGYYRNSSNSNYPRVDTSFDPFSSPQYSGYTNYQNVQQSVDVF AETQKRRSSGEVFLLNLNVFPIRKNLIQTNGISRAIRNALDPEYQCMQSSMDIFNPST SFDYNDDASILAAVSSAHSSQEMELELPSTSIQKTKKNEKSKAKANFAPIFNTASKKD YDDQTLQEDFLSPDKIRDYYNKTGKQRPKQVRMDDFLFKARRVDKGAREFGLHTTQEP KRGSKKKRDSIEQLEVDKSVFERVKLKKKEEVIKKNKSEVEQLDFSLAFGTPSPARNK SKNLKLTKFFEKNETQKNVSNSTYFQSPKCSITVNDPSMYTSETVLEDTIYSTPNKTV LSETISLFTPSPQRTSQRNGKKPNMVQRSILECVKPNPIKRKDPEYDTLHKDRQPLVQ AKRQKCLNNNKKPEFDYSSSPITLNDDEEDINVRRKSPERPTLREEEAQRKKFRRNVS EREQIMRELVDQRFKQERENGGLQTRRAELKDGEVIRNKEMRKNLMHGAACKCCRGYY DGLNMEEQEKKDYINKISRHRYVHQPLPDTPERYWDLTLGQRDEDGREPLMTQERNWE EAAKKNALKSENQNGIHNWN" gene <1086814..>1087682 /gene="Cre-unc-119" /locus_tag="CRE_04635" /db_xref="WormBase:WBGene00055838" mRNA join(<1086814..1086870,1086983..1087094,1087148..1087525, 1087576..>1087682) /gene="Cre-unc-119" /locus_tag="CRE_04635" /product="CRE-UNC-119 protein" /db_xref="WormBase:WBGene00055838" CDS join(1086814..1086870,1086983..1087094,1087148..1087525, 1087576..1087682) /gene="Cre-unc-119" /locus_tag="CRE_04635" /note="contains similarity to Pfam domain PF05351 GMP-PDE, delta subunit; contains similarity to Interpro domain IPR008015 (GMP phosphodiesterase, delta subunit); coded for by the following C. remanei cDNAs: DT934713" /codon_start=1 /product="CRE-UNC-119 protein" /protein_id="EFO86835.1" /db_xref="InterPro:IPR008015" /db_xref="PFAM:PF05351" /db_xref="WormBase:CRE04635" /db_xref="WormBase:WBGene00055838" /translation="MKAEQQQSIPPGSASFPSQMPRPPPVTDQAITTEAELLAKSQIT PNDVLALPGITQGFLCSPSANIYNIEFTKFQIRDLDTEHVLFEIAKPEHDQENEEPPT ESARYVRYRFAPNFLKLKTVGATVEFKVGDIPIHHFRMIERHFFKDRLLKCFDFEFGF CIPNSRNNCEHIYEFPQLSQQLMDDMINNPNETRSDSFYFVDNKLVMHNKADYSYDA" gene <1087968..>1088869 /locus_tag="CRE_04636" /db_xref="WormBase:WBGene00055839" mRNA join(<1087968..1088018,1088148..1088440,1088486..1088714, 1088759..>1088869) /locus_tag="CRE_04636" /product="hypothetical protein" /db_xref="WormBase:CRE04636" /db_xref="WormBase:WBGene00055839" CDS join(1087968..1088018,1088148..1088440,1088486..1088714, 1088759..1088869) /locus_tag="CRE_04636" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86791.1" /db_xref="WormBase:CRE04636" /db_xref="WormBase:WBGene00055839" /translation="MSNEDSIVPIKLAQTFIHVIDFHADPVTCVSASSGTVSYDSILS ARHGRVDLLMKQDAIHVRVHYGIHLKISRSLQCTHQPPRPHHVSKLKRVFNKDLIEKP VKVDIETFQAVKKEHIIRKLGVKETSKPVNDFVEVSKEVDLALKECLLNFQKPEEDET KKGVFNITIEFPSSIPVPVTKPKEKFIIHQKALTRNLSSQIRDSFGSNLDGQQQTEVA LKMFSHKSE" gene <1090081..>1095744 /gene="Cre-cut-6" /locus_tag="CRE_04637" /db_xref="WormBase:WBGene00055840" mRNA join(<1090081..1090116,1093562..1093643,1093697..1093908, 1093955..1094303,1094349..1094551,1094613..1094755, 1094908..1095487,1095619..>1095744) /gene="Cre-cut-6" /locus_tag="CRE_04637" /product="CRE-CUT-6 protein" /db_xref="WormBase:WBGene00055840" CDS join(1090081..1090116,1093562..1093643,1093697..1093908, 1093955..1094303,1094349..1094551,1094613..1094755, 1094908..1095487,1095619..1095744) /gene="Cre-cut-6" /locus_tag="CRE_04637" /note="contains similarity to Pfam domains PF00100 (Zona pellucida-like domain), PF00092 (von Willebrand factor type A domain); contains similarity to Interpro domains IPR001507 (Endoglin/CD105 antigen), IPR002035 (von Willebrand factor, type A)" /codon_start=1 /product="CRE-CUT-6 protein" /protein_id="EFO86669.1" /db_xref="InterPro:IPR001507" /db_xref="InterPro:IPR002035" /db_xref="PFAM:PF00092" /db_xref="PFAM:PF00100" /db_xref="WormBase:CRE04637" /db_xref="WormBase:WBGene00055840" /translation="MRPIPRYDIIISIITFLTLIQTNSANPIDNGLVDSELIHECVTH KAVEVILLLDASGSIGDDTFKKQLSFAMHLASRLNISEEGSHMALIQYAETPKLEFSL GQFNHPTQLEWAIQRIEYQSGATNTGQALRLTLEKGLQGARPGIPKVAIVITDGQSQD DVSEPSQLLRDADVMVYAIGVTNLVNVHQLHQMTGNPVRVFTVETFEQLDRALADSLT WSMCKTEFRPGTPEIICGPDRIGVKASTKQPFEGNVFVMDHYHDEECRAGPEKFPDSR SIGLTVPFSACNVHRYRSLNPKGIFVEVSIVFMFHSLFMTKTDQTVKVQCFYMEADKH VTVPLSVSMITTVFREQIYQMPQCAYTLRKGAPDGPIVRFATLGESVYHRWECIEVEG ADKDTFGMLVHSCYVDNGYGDRVDILDSNGCGLDAVLLSTPDYDTSLRLATKPYHVFK YADRPVLQFQCQITLCLKYDGGCEGITPPQNCKKLPGEDGNHHHHHHDHSERRRKLVR RLADGVGTIDVFTDSVTVLEQEPACQQPLPYPITNTNIWIMATITLINIFVFIVTVWF TFRKRRCKPS" gap 1090690..1092736 /estimated_length=2047 gene <1097564..>1100988 /gene="Cre-vab-7" /locus_tag="CRE_04638" /db_xref="WormBase:WBGene00078737" mRNA join(<1097564..1097605,1098031..1098178,1099908..1100065, 1100537..1100721,1100769..>1100988) /gene="Cre-vab-7" /locus_tag="CRE_04638" /product="CRE-VAB-7 protein" /db_xref="WormBase:WBGene00078737" CDS join(1097564..1097605,1098031..1098178,1099908..1100065, 1100537..1100721,1100769..1100988) /gene="Cre-vab-7" /locus_tag="CRE_04638" /note="contains similarity to Pfam domain PF00046 Homeobox domain; contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR001356 (Homeobox); coded for by the following C. remanei cDNAs: FJ805169, FJ805170, FJ805171, FJ805172, FJ805173, FJ805174, FJ805175, FJ805176, FJ805177, FJ805178, FJ805179, FJ805180, FJ805181, FJ805182, FJ805183, FJ805184" /codon_start=1 /product="CRE-VAB-7 protein" /protein_id="EFO86665.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="PFAM:PF00046" /db_xref="WormBase:CRE04638" /db_xref="WormBase:WBGene00078737" /translation="MQSFDIESLIGASKVPSLVVAEMVAASQASRSSSFSPSSFEHHD PMGAAAVVAAAAAGRHHPYDNRDDGQMRRYRTAFSREQIGRLEREFAKENYVSRKTRG ELAAELNLPEGTIKVWFQNRRMKDKRQRIGGIGWPFPPQMAAYMLNPFAYEMWVKTAA ASQFGASGTPGTYPSGSNNSSASQLASAFLPQLGFPPFLQSNSTIPASPSSPHSDDSS KSKNTSSDDDDSKPVNFSNSPSSSSPSPYSTD" gene <1102903..>1103665 /locus_tag="CRE_04639" /db_xref="WormBase:WBGene00078748" mRNA join(<1102903..1103019,1103105..1103182,1103231..>1103665) /locus_tag="CRE_04639" /product="hypothetical protein" /db_xref="WormBase:CRE04639" /db_xref="WormBase:WBGene00078748" CDS join(1102903..1103019,1103105..1103182,1103231..1103665) /locus_tag="CRE_04639" /note="contains similarity to Saccharomyces cerevisiae Protein of unknown function that may function in RNA processing; interacts with Pbp1p and Pbp4p and associates with ribosomes; contains an RNA-binding LSM domain and an AD domain; GFP-fusion protein is induced by the DNA-damaging agent MMS; SGD:YHR121W; coded for by the following C. remanei cDNAs: DR782247" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86777.1" /db_xref="WormBase:CRE04639" /db_xref="WormBase:WBGene00078748" /translation="MVSCNLTAPEVQVGATIKIETNNGLIAEGIVISLDALRKVLVLD TKETTGSKPVVRIFNSEHLNSITVVTAALEEGQKHAINRCEQFRANNPVNGAKTAERL QKTLGDLRPNLMKSSNVSIKGQQAYIQLKRTIAETYWSGEDIRVLGLVLVQKPYDVDN VTKDAKATGFDETRANNALLQVKKILSKPATGYTSRAPLDFTIGAVVTN" gene <1104133..>1105052 /locus_tag="CRE_04640" /db_xref="WormBase:WBGene00055841" mRNA join(<1104133..1104411,1104458..1104721,1104945..>1105052) /locus_tag="CRE_04640" /product="hypothetical protein" /db_xref="WormBase:CRE04640" /db_xref="WormBase:WBGene00055841" CDS join(1104133..1104411,1104458..1104721,1104945..1105052) /locus_tag="CRE_04640" /note="contains similarity to Interpro domain IPR002052 (N-6 adenine-specific DNA methylase, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86915.1" /db_xref="InterPro:IPR002052" /db_xref="WormBase:CRE04640" /db_xref="WormBase:WBGene00055841" /translation="MSDDEDVPQLSADTMAALSMFQAEQQQKLEEMKSGKIEKIDEDW QLSQFWYDDETSEKLVAESIAAALTFESRPAKIACVSSPTLVNFFHKTEEYKKGEIAL ILFEFDPRFGMKFPSEFVLYDYNQPTELPASLLGKFDVIVADPPFLAAECLIKTAHSI RLLGRENAKVILCTGAIMEDYAARLMAMHRTSFEPKHSNNLANDFSCFANYQTLTL" gene <1105473..>1109024 /gene="Cre-rle-1" /locus_tag="CRE_04641" /db_xref="WormBase:WBGene00055842" mRNA join(<1105473..1105535,1105593..1105895,1105952..1107379, 1107497..1107675,1107814..1108032,1108080..1108360, 1108567..1108812,1108855..>1109024) /gene="Cre-rle-1" /locus_tag="CRE_04641" /product="CRE-RLE-1 protein" /db_xref="WormBase:WBGene00055842" CDS join(1105473..1105535,1105593..1105895,1105952..1107379, 1107497..1107675,1107814..1108032,1108080..1108360, 1108567..1108812,1108855..1109024) /gene="Cre-rle-1" /locus_tag="CRE_04641" /note="contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type); coded for by the following C. remanei cDNAs: DR779870" /codon_start=1 /product="CRE-RLE-1 protein" /protein_id="EFO86807.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="WormBase:CRE04641" /db_xref="WormBase:WBGene00055842" /translation="MAPTGQGGQWQEVLCCSVCNKHFNETFLPVSLICGHVICRRCAE KPENKNKPCPHDDWKPTIPLSEYPNNVALLSVIFPRKQCMSFSGAKTNDEKRIDQLSI QIAKFFREADSERGGTVSSRDISRTLQRKVLALLCYQWRENDGRLKTLKMCRGISERV MIEIILSIQSNTHVSSQLWSAVRARGCQFLGPAMQDDVLRLILMTLETGECIARKNLV MYVVQTLVSDYPQVSKTCVGHVVQLLYRASCFNVIKRDGESSLMQLKEEFRTYDSLRR EHDSQIVQIAFESGLRIGPDQWSALLYADQSHRSHMQSIIDKLQSRNTYQQGIEELRT LTTSNASMLIPAYRYFLSQVISCLEFFAAPEHEDTSQKAVAESLSQIKTLLKLHCSQD DLRKAPKEDRRVIIAHSPLMPHGVVQSISYVDENGRSSSRTAFKQSSEDKKKDHSAPQ TTPSSKNQPQLQQQPSPYTPRQKRYQMGIPPNRLGYATHQNHFSGGPPQMQPHYFASQ PIGSPAMQRIRGRQMNGMPPQPMPRPGPMPMLIGFSPEMMGPGGVPPNSSMMQTAEVV TADGQPAVINGTPQRVVIMQSPTHMPGGPVVMIPQQPLGSSPTPVPMGAMTPTIPVQV PPNAIWTATSPTGSVIYPAASPPGQQPHTIWIQSTDGNVFPMFDRGTGMVWGPTTMLR ESGADAEQLLAKRHEILKRLQPSEDDDDPEDGGIGHVSYTVASSVLDDRMDHHPMAMI PVSNIDLPAIPINFASMPTEETMTMIGEMVQSRSRAPSLTAQTSGQQIIAPIVSSSTA TVQSECGTMSVMDSYYQPITSSAIQNSPTMPQPGIPMVSVPVQVPVVPAEPFNPSVPP PPQPGQTMLVDSATGLLTPMRPILVAHPQNVVSNSLDKIVDVKERLSEAQGNVSEAEN AHLRMELRMAESEMAHLDPYTKNNCLLRELHQVDMELQQLHINPTVEG" gene <1109616..>1111213 /gene="Cre-strd-1" /locus_tag="CRE_04642" /db_xref="WormBase:WBGene00055843" mRNA join(<1109616..1109778,1109822..1109934,1109964..1110214, 1110258..1110613,1110849..1110939,1111015..>1111213) /gene="Cre-strd-1" /locus_tag="CRE_04642" /product="CRE-STRD-1 protein" /db_xref="WormBase:WBGene00055843" CDS join(1109616..1109778,1109822..1109934,1109964..1110214, 1110258..1110613,1110849..1110939,1111015..1111213) /gene="Cre-strd-1" /locus_tag="CRE_04642" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="CRE-STRD-1 protein" /protein_id="EFO86651.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04642" /db_xref="WormBase:WBGene00055843" /translation="MANVSILYTTSATSLAPNVAFSRTTDSKVQPTTITESSGVPNLK VSGFDCIRYMGTCNGGHIYLGRQQRRFKEFVAIKKFSIDEIDDYTAIAYVAFFQRETA HLRLLSHQNIIELKESFVFEKSIYQITPAMNLGSLFDIVCEYKKWGINEKATAGITVQ VLDALIYLHQKRYIHRDVKPKHILIDSKGNVKLTGFRFMIELNHHLDCVFDYDTHLQN QIYYLAPEVLAQNMHGYTAKSDIYMLGISICEAINGVMPFAELEPLEMLLRKLNGQVP RPVDKLSLQDDENMGIDITLRPQEHLTRQFSGEMHAFIANCLNYEPQQRSSASDLKDS DWLTMKNIKGVGPKELSQELQLDYSHFDLSLWEQEPVMPSEPEQKFETAFDYTSIS" gene complement(<1111708..>1113077) /gene="Cre-zig-5" /locus_tag="CRE_04846" /db_xref="WormBase:WBGene00055844" mRNA complement(join(<1111708..1111836,1111882..1112096, 1112329..1112439,1112643..1112886,1113000..>1113077)) /gene="Cre-zig-5" /locus_tag="CRE_04846" /product="CRE-ZIG-5 protein" /db_xref="WormBase:WBGene00055844" CDS complement(join(1111708..1111836,1111882..1112096, 1112329..1112439,1112643..1112886,1113000..1113077)) /gene="Cre-zig-5" /locus_tag="CRE_04846" /note="contains similarity to Pfam domain PF07679 Immunoglobulin I-set domain; contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR007110 (Immunoglobulin-like); coded for by the following C. remanei cDNAs: DY525262" /codon_start=1 /product="CRE-ZIG-5 protein" /protein_id="EFO86860.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="PFAM:PF07679" /db_xref="WormBase:CRE04846" /db_xref="WormBase:WBGene00055844" /translation="MPSPLNHQLFRVLSIILLGSHVFATKAADVPSVCDALIEPSVLS IDKPLENIKANRGDSLVLRCAFYASPQPNIVWYHRGKRLENHPAAQFETLLSATNLGQ SVVESAFRIDCLDERTAGEYFCEATSPCTQPAVTSSTVSIIKAPKSITGTCKAHRQSV QSPPLISVFTLSRIELPGGVTQLACRTRGNPAPKTKWYKIEEDESLSPIEGQRNYMHL PNGDLLIVGDEETISESFRCVAENSLGSVHQDSSVIYMLA" gene complement(<1118354..>1123238) /locus_tag="CRE_04847" /db_xref="WormBase:WBGene00055845" mRNA complement(join(<1118354..1118523,1118572..1118664, 1118738..1119508,1119554..1119621,1119725..1119934, 1120003..1120322,1120378..1120601,1120652..1120862, 1121230..1121510,1121557..1122321,1122365..1122715, 1122758..1122904,1122949..1123068,1123118..>1123238)) /locus_tag="CRE_04847" /product="hypothetical protein" /db_xref="WormBase:CRE04847" /db_xref="WormBase:WBGene00055845" CDS complement(join(1118354..1118523,1118572..1118664, 1118738..1119508,1119554..1119621,1119725..1119934, 1120003..1120322,1120378..1120601,1120652..1120862, 1121230..1121510,1121557..1122321,1122365..1122715, 1122758..1122904,1122949..1123068,1123118..1123238)) /locus_tag="CRE_04847" /note="contains similarity to Pfam domains PF01683 (EB module) (2), PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain) (6)contains similarity to Interpro domains IPR002223 (Proteinase inhibitor I2, Kunitz metazoa), IPR006150 (Cysteine-rich repeat), IPR006149 (Nematode-specific EB region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86724.1" /db_xref="InterPro:IPR002223" /db_xref="InterPro:IPR006149" /db_xref="InterPro:IPR006150" /db_xref="PFAM:PF00014" /db_xref="PFAM:PF01683" /db_xref="WormBase:CRE04847" /db_xref="WormBase:WBGene00055845" /translation="MIYSLNRITCFLIICIQVSLTFGTIPLSEGLHQIYARNAADVKK LGDNCTRNTECVSGAVCLGTCRCRNTHVSVEEQCWKKVEPGNVGCTFDEQCEGVWPMT TCQSGQCACAEEETLIETPEGNVCVVPGNCPTNNVNGALYDRATHRVSTCLTFTSKKE KNTQFIGCDEYPEVYDCIAGTCCPTRGMTCIQPLSTGETKNSSTNEDERWWYNSESGQ CLPFKYSGNGGNSNNFLTKTQCESYCGGRCIRGDPLPLEDSIPPSNDNYFCKIHESDR QLCCPTPSFVCSSLGGVNVDKNTMRPFSNGSPRRGAEVLQRWYWDTNELACKTFKYYG QGGNFNNFGEKQECVDFCTAGLCPHGSPLNDPSDNIQRCQGQEQCPETHECKNTICCP RPAATCLQTLKTREKCEPGETTTKWTYSTEHNMCKSVIASRCLIGDNQFESIEECQTV CSSVQAQPKCPIGRAYKGSDQVVVRCSSLKRCPSNYECIYTGTVHACCPSRENICNQG LQVGTTCGMSTLQRWYYDPSHNRCNQFEYQGCNGNDNNFVTRLDCIETCHRFDCPDGG EALVDSSNGRVIACERNDDCPSTHMCTRQLYSNRTSCCPSRKWICSHDANEGVACGTP SKRFYFDANTETCLQFTYLGCAGNANSFSNRVACYQFCQSASCSSSEVVYQPSNLDEP FDCSLKTCPRHFSCVRNVWDETKNVCCGSPNFGVCSSTQHPMLLFSTQQPMSCTPNSQ NSCPLSFQCTYSSIRMLYFCCRDIEKIDKCLQGSRPEIWQSTAEPRACSRDSQCPSTT SCFAPTPFSSGLCCARIDEICPATFIYDEQKSSDGQCSPLEKNTCGRDGQSVCLYSDV KNRFVCCRREARQIQALAKCPPGSIMELTKTYCDPENPCPKTHFCMKKSTDRKGICCR HPSLKRVMPMKTRKAGATSRKQTSRYRCPKGEKILKIDGEAKNCEVDADCPEFYKCTS QGASSTYQSICCGLDINEICPTRVYPAIRVQKCSMCAIGYECHKNYCCPQKEVACSQP IPELNNDKDSDESIIRYYYDSETNTCHSFNYLRIIGQSSTAQNHFSDHSSCIDMCVQS QISEEDLQCPHPYVNPLDHPQMCITSLKSCSDSETCLKTTTGKNYVCCQHPPSFQMLM NNLCGASYQPTLNKSGNPIRCSSSSRCASRICRQSPVLRYSICCQRRIPKTRLLIRPL SEGQIRKPICRSEAESTMGSCLPKLFPGETECEVDSQCVSPSTCNERRCTCPEGTVQF RRMCGNILVGIMKKKEVTVTG" gene complement(<1123874..>1126622) /locus_tag="CRE_04848" /db_xref="WormBase:WBGene00055846" mRNA complement(join(<1123874..1124059,1124109..1124386, 1124431..1125235,1125280..1125465,1125513..1125729, 1125775..1125884,1125929..1126101,1126589..>1126622)) /locus_tag="CRE_04848" /product="hypothetical protein" /db_xref="WormBase:CRE04848" /db_xref="WormBase:WBGene00055846" CDS complement(join(1123874..1124059,1124109..1124386, 1124431..1125235,1125280..1125465,1125513..1125729, 1125775..1125884,1125929..1126101,1126589..1126622)) /locus_tag="CRE_04848" /note="contains similarity to Pfam domain PF00637 Region in Clathrin and VPS; contains similarity to Interpro domain IPR000547 (Clathrin, heavy chain/VPS, 7-fold repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86563.1" /db_xref="InterPro:IPR000547" /db_xref="PFAM:PF00637" /db_xref="WormBase:CRE04848" /db_xref="WormBase:WBGene00055846" /translation="MAALLDSDVTMAIRIFREIEDAAMVAALEQIETIEEKNLLHAQI YTILSRYDDAEQLYLDSSRPIEALNMRRDLLEWPKALVLAETMDPKEIPFLSKEYAQE LELTGDHANALANYEKGVVENENNTPELQEHNEICQSGIARMAIKTGDLRRGVQLAKQ LEGRVVKRDCAIILEQMKQFTEAAQLYEVGLFYDRAAAVCLKANAWAKVGELLEKVKS PKIHIQYGKIMEKEKKYKIAVQCYEKGRDYDNQVRLLLDPLNEPDEAVRVVRESRSIE GAKLVAKFFVKLGDHNSAIQFLVMSQCVQEAFELAEKNNALKEYANAIEKHGNISQSL ELAEYYNRLNDMYMAAKFFTQAGQYSTAVSLLFKNGDDEDCVALAVDCGIKSKDKALT NKLIKFLLGEDGNPKDPSQLFRLYVGLGKTRDAANTAVVVAEIHQAKGSYRVARDLLF QMHQQLRAQMMRIPLDMNKSLMAIHSYIIVKSLINRKEILLAARLLIRTCGEVQRFPT HVVSILTSAVVICTQANLKKSAHKFASQLMSQEYRPKIHEKYKKKIEDIVRKGGNQND VPENNTPCPICDFPMPDYAMSCDNCNNLVPYCILTGRHIVTDDFSRCPHCEMPGFYSE FRKLSSINENCYMCGGDLKGAIPEDAKAYLDKMENDYK" gene <1126725..>1127966 /gene="Cre-sid-2" /locus_tag="CRE_04643" /db_xref="WormBase:WBGene00055847" mRNA join(<1126725..1126865,1126912..1127259,1127435..1127851, 1127904..>1127966) /gene="Cre-sid-2" /locus_tag="CRE_04643" /product="CRE-SID-2 protein" /db_xref="WormBase:WBGene00055847" CDS join(1126725..1126865,1126912..1127259,1127435..1127851, 1127904..1127966) /gene="Cre-sid-2" /locus_tag="CRE_04643" /codon_start=1 /product="CRE-SID-2 protein" /protein_id="EFO86751.1" /db_xref="WormBase:CRE04643" /db_xref="WormBase:WBGene00055847" /translation="MIRYQTLVFAVFLLPVFWCFDSFLITSIEIRNDVGNINCTSSNL TVSINELALKPLCQIEEDANTKISYVTLTYNETESIPNGKNITFNLESSVTVKNYEPS QNMTNSANYQFMGIFVPDKSSKANTVLVRNVTLNKVEAPATTSASKFSEADVPISNKT ILTVTYIHIQYDDSTKKEGNSNGGAVAVAIIEGIALIAILAYMGYRTMVKHRMKESTM NAALYGYDNNSRSEKMQRFISSFLSLVTVPDSIRMSDIPPPRDPTYATPPTPTVTQQT PTRNTVMTTQELVVPPTQNTSAPAPTRPTTGASGQFNDPFDSLDSW" gene complement(<1128035..>1131129) /gene="Cre-dyf-2" /locus_tag="CRE_04849" /db_xref="WormBase:WBGene00055848" mRNA complement(join(<1128035..1128349,1128397..1128448, 1128519..1128664,1129184..1129410,1129454..1129795, 1129840..1129907,1129953..1130239,1130286..1130392, 1130437..1130636,1130680..1130814,1130858..1130923, 1130972..>1131129)) /gene="Cre-dyf-2" /locus_tag="CRE_04849" /product="CRE-DYF-2 protein" /db_xref="WormBase:WBGene00055848" CDS complement(join(1128035..1128349,1128397..1128448, 1128519..1128664,1129184..1129410,1129454..1129795, 1129840..1129907,1129953..1130239,1130286..1130392, 1130437..1130636,1130680..1130814,1130858..1130923, 1130972..1131129)) /gene="Cre-dyf-2" /locus_tag="CRE_04849" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR006530 (YD repeat), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="CRE-DYF-2 protein" /protein_id="EFO86600.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR006530" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE04849" /db_xref="WormBase:WBGene00055848" /translation="MTLKVTPCNLSPSDFSLNPKPAQLQYRKGEEEHGTGPIIHRWRP HGHTLAVACANNSVIYYDKKGNVIDALNPTGKIVDIAWDKEGDVLAIAVANTGTIYLW DVNSRNTDTVESCATSSKELPTCLAWSPTSPTLVIGNNAGNIVVYNHRTSRRIAVMGK HQRSVTQITVTPEDLIITCSDDNTISVTNLEGTTVSTTTTNGEPTKMDYGSVNRKGGN GLTMVSAVLGKKILMLAPLNALDDPVNLQFQEKYGIIHSYKWFNDGYILMGFDCGYII SISAHRVEIGSEIVSFLEYRGYLASLAVSTSFNKLLTIGDNMVKVRDLDDLTTVTMLT EIETEKNLSEIEVTEDGQLVAVSSQSGVLSVFVTKMPILAASYNNSICYLTNLTQVTV VAEVEKKGSSTLELGIEPTIMGLGPSNLAVANNNTVFFYDYHTPAQMQAAQQLQSAQS AAEKPSVVNAEPINRVEYLSTVANIQLNYMYAAVNFGGKLRLHRIRNSEDNVSVEFPE TNRNATLYAYALTENFLIFTTSSNYIVYFSLSEWAVVSEYRHVVPVRFVFPHPTNVVC CCFDDRLEAFIYTAVDDEVFKLPSVGSSAHYKGALWETFTIDKNTFAVFDTQNIYVFL LSKQHIQGDSVIYVSATRLPHAYVPLSLNKGIVTCLMSNGKLSSVLLDSHKTESVITD KSETVIDELLTRSLLMHR" gene <1131780..>1137435 /gene="Cre-cul-2" /locus_tag="CRE_04644" /db_xref="WormBase:WBGene00055849" mRNA join(<1131780..1131883,1132190..1132330,1132608..1132668, 1132719..1132858,1132907..1133012,1133061..1133305, 1133354..1134782,1134883..1134975,1137307..>1137435) /gene="Cre-cul-2" /locus_tag="CRE_04644" /product="CRE-CUL-2 protein" /db_xref="WormBase:WBGene00055849" CDS join(1131780..1131883,1132190..1132330,1132608..1132668, 1132719..1132858,1132907..1133012,1133061..1133305, 1133354..1134782,1134883..1134975,1137307..1137435) /gene="Cre-cul-2" /locus_tag="CRE_04644" /note="contains similarity to Pfam domain PF00888 Cullin family; contains similarity to Interpro domains IPR016157 (Cullin, conserved site), IPR001373 (Cullin, N-terminal region), IPR011991 (Winged helix repressor DNA-binding), IPR016158 (Cullin homology); coded for by the following C. remanei cDNAs: DR778152, DT936777" /codon_start=1 /product="CRE-CUL-2 protein" /protein_id="EFO86912.1" /db_xref="InterPro:IPR001373" /db_xref="InterPro:IPR011991" /db_xref="InterPro:IPR016157" /db_xref="InterPro:IPR016158" /db_xref="PFAM:PF00888" /db_xref="WormBase:CRE04644" /db_xref="WormBase:WBGene00055849" /translation="MASNTQRASNRTTLGRRKAARSVDFGLLEPNYKKGRSTYSVMYS LKPKVVDFDQVWVQLRPTIIDIINLVPISNVQWHHKFSDVYDICVSIPTPLSERLYQE VKACIKEHVQQKRAEIREVDPDLLIQEYNKMWNIFHQGAIYIHLLFGYLNKQFVRQKR CTDLDNFAQYAAFLQIPDVKEIGCLALEIWKEDLVKEILPALVKLLLAAIDSDRKGNY PQVANVVSGVINSLVKMEETAFDAPPEGTRYKSRESMTAFYQENFEKPMLNDTEIYYS SLAQKMLAELSCSAYMEQVIIMLEQEEIRAKKYLHESSVEKVISLCQRVMIKAHKEKL HSVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKAKGLEAVSRLSGDNVP QQFVENVLRVYNKFNDMKTVVFMDDGEFSSGLDKALQGVVNSKEFGQSVPKASERLAR YTDSLLKKTTKGLSDADLETKLGSAIVIFRYIEDKDIFQKFYSKMLANRLIASTSISM DAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSSNFDKYISEIKPSRPGTKFVPT QALILQAGSWPLNAPQLSTNATTNQTAQDVANFHLPMIFQPVIQEFETFYTGKHNGRK LTWLYNMSQGDVRLTYLDKQYVAQMYAYQIAALLCFERRDTVVVREIGEEIGVSGEYL LKTIRTIIDVSILICDEPTLTIDSPLKLNLSLTSKRMKFRLQAPQVNKVVEKEQEAVA NTVTQDRKYYMECAIVRIMKTRKVLKHNALVSEIMDQTKSRFTPDVAFIKKSIEDLIE KMYIQRTDQNDEYQYLA" gap 1135478..1136931 /estimated_length=1454 gene <1145884..>1161295 /gene="Cre-lit-1" /locus_tag="CRE_04645" /db_xref="WormBase:WBGene00055850" mRNA join(<1145884..1145938,1154665..1154769,1154915..1155082, 1155131..1155232,1156922..1157034,1158670..1158785, 1158837..1159022,1160196..1160302,1160350..1160978, 1161083..>1161295) /gene="Cre-lit-1" /locus_tag="CRE_04645" /product="CRE-LIT-1 protein" /db_xref="WormBase:WBGene00055850" CDS join(1145884..1145938,1154665..1154769,1154915..1155082, 1155131..1155232,1156922..1157034,1158670..1158785, 1158837..1159022,1160196..1160302,1160350..1160978, 1161083..1161295) /gene="Cre-lit-1" /locus_tag="CRE_04645" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR003527 (MAP kinase, conserved site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related); coded for by the following C. remanei cDNAs: DR780808, DR780816, DR408957, DR781705" /codon_start=1 /product="CRE-LIT-1 protein" /protein_id="EFO86703.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR003527" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04645" /db_xref="WormBase:WBGene00055850" /translation="MGRNQEGQFNGAGNSESAGSSSSSGCSSSSTELYDLAAAHAALI SRQQQILSQAIPIIPEHQLAAAAVAAHHHHHQLHPSVQQQIVAAHHHHHHLPQLGHHQ IVLPRSDVIQQPPHFVLQQHLQNLVQQQQQQQALHHHQQLVGDMALVSHTHPAAVGST TCYEKNQQKQQQVPQIPTQPQVAHVSSNAILAAAQPFYPPPVQDSQPDRPIGYGAFGV VWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANP SFFQELYVLTELMQSDLHKIIVSPQTLTIDHVKVFVYQILRGLKYLHTANILHRDIKP GNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIW SVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQDAMKYACEGAKNHVLRAGPRS SNVQSLYRLSPQTTDDAVDLLVKLLQFDPDKRISVQEALQHPYLEEGRLRFHSCMCTC CYTKPNMPSRIFSNELDPCHESPFDPKWEKDMSRLSMFELREKMYQFVMDRPALYGVA LCINPQSAAYKNFASSSVAQASELPPSPQAW" gene <1162327..>1164134 /locus_tag="CRE_04646" /db_xref="WormBase:WBGene00055853" mRNA join(<1162327..1163020,1163481..1163650,1163694..1163761, 1163812..1163864,1163911..1164014,1164063..>1164134) /locus_tag="CRE_04646" /product="hypothetical protein" /db_xref="WormBase:CRE04646" /db_xref="WormBase:WBGene00055853" CDS join(1162327..1163020,1163481..1163650,1163694..1163761, 1163812..1163864,1163911..1164014,1164063..1164134) /locus_tag="CRE_04646" /note="contains similarity to Bos taurus Neurofilament medium polypeptide (NF-M) (Neurofilament triplet Msprotein) (160 kDa neurofilament protein) (Neurofilament 3).; SW:O77788" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86881.1" /db_xref="WormBase:CRE04646" /db_xref="WormBase:WBGene00055853" /translation="MSAEEKSSKENVSFGGFLTENVRFSQKMKLVDEKEQPTQQESDK EKSSKDSRRKNKSKLKTAEKIPSSRRNVDENNFKKSKSIHVNGKGTKEKATKEGSKEV EEMPPTANSARSPAPNAQKKKAKSALPSTKTNQTPSATPIDTAKNGSNEDGKKPTITP TPDVAPDKNSRVMGMNEVAEEVKKPINTPKKKKKERKELVRKTNLISHIRPGCPRDVD IIRRRAFEDELIQFETGEFTYSTDPTRYRFRSIPPLELVIQFVFPSLLLLAIMLASVS CMIFLTKEYEVEMEFNDMSEVSFSKYDSYVIVDNIDAYLKNETILRHYNCPGLVQGPY KKLDEHEFAFLKFESRRIKNAMKALTYRWIVQTEVVMNMNFDCPPSVILELE" gene complement(<1164581..>1167448) /locus_tag="CRE_04850" /db_xref="WormBase:WBGene00055854" mRNA complement(join(<1164581..1165441,1165490..1165557, 1165665..1165871,1165922..1165960,1166036..1166458, 1166530..1166701,1167380..>1167448)) /locus_tag="CRE_04850" /product="hypothetical protein" /db_xref="WormBase:CRE04850" /db_xref="WormBase:WBGene00055854" CDS complement(join(1164581..1165441,1165490..1165557, 1165665..1165871,1165922..1165960,1166036..1166458, 1166530..1166701,1167380..1167448)) /locus_tag="CRE_04850" /note="contains similarity to Brugia malayi Putative uncharacterized protein (Fragment).; TR:A8PCH9" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86707.1" /db_xref="WormBase:CRE04850" /db_xref="WormBase:WBGene00055854" /translation="MGITACCCCSSKDAAITIGIWSLVSSIAQLGIMGWQMAAIKYER DRAANTLLPNYNTYGRFDIPSYFESYWQSPEERYYTGLFVIQVLCLISAFFLVFAAAA MIYGVHTWSKYLVWPWFPCMISSILATLAYCIMWWCGDVRDYWLAITIIEIIVVFINV SFSFCWKVLKKNLQIYCVVVVMMYYRRINATTDEYEGKDRRGVRYKINRNGNSRRDLL DSYEQGVHRSPPMKYKPLAQPYPVYPSYSRAGVPQTPIPLPPTQINTPYPIDPLEVQF QMEPIVKNIRELEEDPVGSWVRDQQSIDRGHEARSEPITVSKQVHPTTLQHSRSVPSL HGGTLVSHRDCEHRDDKHRYNSYLIYFLCSLCFRSSSRRRKSRSRHEYDGYSSASDPS DFTRQHRHRSSSKKRHRSRSRFDESVTNYDSELERERERRRSKRHRHGGSQRSSSRRQ RDDRGGGREREKERDRDRERRDRDKERYDRERDNRENERRRRDHRDDRESEVPRRREG DRRSRHPDSHENSGGSQEMTFPLSGGITIPQHIVIPPSSGERGPNGEPVPQKYQINSE ITINYDHNGRPVVNPREPQPTIEEPFRRRQPVSFDTFYPAYSEIFR" gene <1170591..>1172672 /locus_tag="CRE_04647" /db_xref="WormBase:WBGene00055857" mRNA join(<1170591..1170709,1170754..1171153,1171195..1171380, 1171430..1172022,1172075..1172178,1172224..1172472, 1172524..>1172672) /locus_tag="CRE_04647" /product="hypothetical protein" /db_xref="WormBase:CRE04647" /db_xref="WormBase:WBGene00055857" CDS join(1170591..1170709,1170754..1171153,1171195..1171380, 1171430..1172022,1172075..1172178,1172224..1172472, 1172524..1172672) /locus_tag="CRE_04647" /note="contains similarity to Staphylococcus saprophyticus subsp saprophyticus Uro-adherence factor A precursor.; SW:Q4A0V8" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86562.1" /db_xref="WormBase:CRE04647" /db_xref="WormBase:WBGene00055857" /translation="MSNNYNYGPRMKFESHQMLLSFTPLRTTLSEYVDAGDMKEEKIS HSESFVTTNSMSSNLNHYWKKVNSLNKTDSSMTSNSTVTSIPSAPKTFESSSNTLDGS TITPSTHSLKSAKLNNLSDWQYDSNRSDSSIIGNRMISLENLADSLIEPTETREENQC LSLQKQALDELETPLNRSINQFSEFTQKQNVALDQISKEGGRKLKNCNDRMAYLKESG EEVFADFDKKTSDLLDPTIKLYETKAKVEKFVGNNEEFYKENQATGTMISENERLLAR IRQNLPTNKASSVRFPASVQEEKRLEAALSSIKSLLHSFPFDENERADFEYTIKKIEK DATFEKKKKCELIVRHLLSVMNNWEENQSTVSFDSDNWNSVSTIDSRDDVLDLNVYEN GLYDLKNSSIYDSNLNDLEGELRSASIRMAVEGPNETIECSPWNSASNYSGWSSNSNS LDSIQPDSSMENSTLSSLSSNSIPNQTFDDAHRNLIANASTKTAYSSSSPVSPRPPRS IHEKSTLQSATGTRSDSIPSFNFSSVSLSDMVDEALHTAKDVAENQATHLMTALQNSA RQCGVVFSDLMTAVSTSSESISDTQSSHHSIAH" gene <1172984..>1174215 /locus_tag="CRE_04648" /db_xref="WormBase:WBGene00078725" mRNA join(<1172984..1172992,1173040..1173201,1173247..1173363, 1173409..1173519,1173566..1173633,1173681..1174001, 1174050..>1174215) /locus_tag="CRE_04648" /product="hypothetical protein" /db_xref="WormBase:CRE04648" /db_xref="WormBase:WBGene00078725" CDS join(1172984..1172992,1173040..1173201,1173247..1173363, 1173409..1173519,1173566..1173633,1173681..1174001, 1174050..1174215) /locus_tag="CRE_04648" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86548.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE04648" /db_xref="WormBase:WBGene00078725" /translation="MNQLHCQKNAEYYPAERGKTAAPFLENGMIIGVKRSFRVEKMVG GGGFGQIYRAVDLESKLVVAVKVEPKSSESGRIVLELNILVQLAHSSHIPKVYYSGEV GIYNFIIMQLLGSNIADLRKFQRSRSFSVETTSRVGIQCLECLKTIHKLGYIHRDIKP SNICVGIGEHKRVLYIVDFGMARQIRFSDGTFRPERPYASFRGTTRYVSLTAHERKEQ GFVDDIWCLFFSLLELVEGLPWKNIVDQDQVCNAKRLMLNNFQSRKMGRNFEMFPQIL ERTKRIETPDYERLIGILKSSCPSFNELEEFEWDDHDEQYQ" gene <1178445..>1181443 /gene="Cre-tyr-2" /locus_tag="CRE_04649" /db_xref="WormBase:WBGene00055858" mRNA join(<1178445..1178750,1178871..1179050,1179312..1179412, 1179466..1179908,1180225..1180328,1180378..1180773, 1180820..>1181443) /gene="Cre-tyr-2" /locus_tag="CRE_04649" /product="CRE-TYR-2 protein" /db_xref="WormBase:WBGene00055858" CDS join(1178445..1178750,1178871..1179050,1179312..1179412, 1179466..1179908,1180225..1180328,1180378..1180773, 1180820..1181443) /gene="Cre-tyr-2" /locus_tag="CRE_04649" /note="contains similarity to Pfam domains PF00264 (Common central domain of tyrosinase), PF01549 (ShK domain-like) (2)contains similarity to Interpro domains IPR008922 (Di-copper centre-containing), IPR002227 (Tyrosinase), IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="CRE-TYR-2 protein" /protein_id="EFO86870.1" /db_xref="InterPro:IPR002227" /db_xref="InterPro:IPR003582" /db_xref="InterPro:IPR008922" /db_xref="PFAM:PF00264" /db_xref="PFAM:PF01549" /db_xref="WormBase:CRE04649" /db_xref="WormBase:WBGene00055858" /translation="MRVKTEKSEIWKFSEHRKNRETMRWTPILALLLCATIISVLAVK STTKKGGNVVGGTAVKRPMVKKVPMANKNIQRLNQKRWREPPRDCSDAPKHLKQTCLM IRRMDLATRRRLARQSVRQTRPNQVPNWLQPIPVPANARGQAAYHPYDCMTLLCLCPF FNGRNVNGQCVLSNGVVLQMSWRKEYRMMSEDERRRWHNALNTLKRNGEYDRLSRQHL EVGVGSGAHSGPGFLPWHREYLKRVEIALRMVDPLVFIPYWDSVMDSYLPDPRDSILF SDLFVGGTDYYGNVITGPFAYWRTIEGRSTILRNLGAEGQLFNENQVNTIVAQNTIEN TLAYTAPQPGCPYPNNYGAIEYSHSNIHLWIGGDMKPPSTSANEPIFFMHHSFVDYLW ELWRQLQQPRWLREQAYSADHPTCANWQHFSYAPMRPFPYLVNRDGLSNSYTDQMYRY APRATCSHQRPNCGSPYLFCDTRGYPHCVSKIRLNGNCRGFEQNDACYASRCWWGRCV NANFAAARMKGARTHSNSTLIDLELANKVTVNGTKVERVPLVKRISVKMTAPLFVDCY NRMPCCDSWAKTGGCQREPEFMSQYCQASCNTCTPSYNTTDSCTDRHVNCVAWKADKM CSGKSADFMSENCRHSCGKCELERDSQCFKNGKVCFLIPHYFGSNIVRFQIIAIPVSQ NLRESISDSLMSEVTNRIKKVKKQEIDATKKVRHG" gene complement(<1181785..>1182789) /locus_tag="CRE_04851" /db_xref="WormBase:WBGene00055859" mRNA complement(join(<1181785..1181983,1182026..1182152, 1182266..1182359,1182406..>1182789)) /locus_tag="CRE_04851" /product="hypothetical protein" /db_xref="WormBase:CRE04851" /db_xref="WormBase:WBGene00055859" CDS complement(join(1181785..1181983,1182026..1182152, 1182266..1182359,1182406..1182789)) /locus_tag="CRE_04851" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86833.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CRE04851" /db_xref="WormBase:WBGene00055859" /translation="MLYESILFGSTFVMTSLILMTGCSSKKKAAPSVAPSPQSASKSP AATPSVAKSTVSKSPATETKATETGETKDTTNAETKNEETKGNVRFVWISEMLIFFQD EETNDKTEAKKDETRQETVRKDDDKKDDGEKKKEEDEKENDKKEENKNENKKKKEDFI RADPTELSFESATTSQKKLRLKNLTSKKLMFKVKSTTTNTYLINPVFGKIEPNNFADV MITHRPSGKREDKLVIVSSEMLGKELEMAKTFKQIKTTGNDVIVKLVST" gene <1183329..>1183877 /locus_tag="CRE_04650" /db_xref="WormBase:WBGene00078758" mRNA join(<1183329..1183415,1183460..1183627,1183671..>1183877) /locus_tag="CRE_04650" /product="hypothetical protein" /db_xref="WormBase:CRE04650" /db_xref="WormBase:WBGene00078758" CDS join(1183329..1183415,1183460..1183627,1183671..1183877) /locus_tag="CRE_04650" /note="contains similarity to Pfam domain PF00036 EF hand; contains similarity to Interpro domains IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86904.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="PFAM:PF00036" /db_xref="WormBase:CRE04650" /db_xref="WormBase:WBGene00078758" /translation="MAPPPLMEEVQDVFHFHDTVGDGKIAANQLPAALRAMMLNPTEA LLEELIKKRTGGARISVEEFIPIYKKVETACGRNTTLKEFQTLLSHFDRDGNGQIPIV ELKSMLQNGGEKMTNQEVESLLFGVEVVDGKININHFLNNHLQMGLQEAEK" gene <1184198..>1186705 /gene="Cre-toca-2" /locus_tag="CRE_04651" /db_xref="WormBase:WBGene00055860" mRNA join(<1184198..1184230,1184271..1184386,1184431..1184554, 1184604..1184764,1184809..1184914,1184964..1185250, 1185296..1185372,1185423..1185553,1185607..1185892, 1185934..1186043,1186182..1186320,1186370..1186580, 1186624..>1186705) /gene="Cre-toca-2" /locus_tag="CRE_04651" /product="CRE-TOCA-2 protein" /db_xref="WormBase:WBGene00055860" CDS join(1184198..1184230,1184271..1184386,1184431..1184554, 1184604..1184764,1184809..1184914,1184964..1185250, 1185296..1185372,1185423..1185553,1185607..1185892, 1185934..1186043,1186182..1186320,1186370..1186580, 1186624..1186705) /gene="Cre-toca-2" /locus_tag="CRE_04651" /note="contains similarity to Pfam domains PF00018 (SH3 domain), PF00611 (Fes/CIP4 homology domain); contains similarity to Interpro domains IPR001060 (Cdc15/Fes/CIP4), IPR001452 (Src homology-3); coded for by the following C. remanei cDNAs: DT935305" /codon_start=1 /product="CRE-TOCA-2 protein" /protein_id="EFO86604.1" /db_xref="InterPro:IPR001060" /db_xref="InterPro:IPR001452" /db_xref="PFAM:PF00018" /db_xref="PFAM:PF00611" /db_xref="WormBase:CRE04651" /db_xref="WormBase:WBGene00055860" /translation="MIPVSKFFTVQDPSNALLSYTQKGIDFFEKIGQFSKEKAAIEEE FSTKLKNLAKKYAKKSEEEDEVLKSVSYINSFNSYLQQLDQIAGKHHAAAESTREDIV SYVSSKTCQLRSSRKNAINDLKTINDILEDQINEMWKSGKFYSKSYKEAENAYQKFYK ADKNLEISRLELEKARTHANTRNEICEKSKNDYSRTVSNTNLEQKKYHDELLPVIFSR LKEVDKECIGDMRHVLQKLITVDECLAEGIGNCRLKMQNSINRIDSEADAQLVLDSVE ATIEKPTSFDIEDLGDPKDCDSRASDSIDGKQRVEVAISSYHVLKSPNKKKIIRNFLG MREKESEVPRESESPKEAYTDNSKPPQVRLSCLRSKIKNMEKQLEQAVQGREGITRLQ KAYYANPQHGNPAACTEPLISYAKKIETLNTNIQNLKEFYTLLEMSVEGMPTERSFGG RDTPDTTRSVSGCSTNLSSLRTHEDGILRQFLSSPKRLLSSPRTPKSGQKPISTTPIR RKNDISSPVLRSSFSGVIRKTPVSNSVISSPHRSVSSPMKIDKSEMLVTVLFKFETSS AETMSISPGEELYIQEGDNGDGWTRARKKKGQEVGFVPTSYLQFPGLSTAITPP" gene complement(<1188521..>1190935) /locus_tag="CRE_04852" /db_xref="WormBase:WBGene00055862" mRNA complement(join(<1188521..1188774,1188830..1189219, 1189267..1189910,1189957..1190166,1190212..1190513, 1190636..1190748,1190797..>1190935)) /locus_tag="CRE_04852" /product="hypothetical protein" /db_xref="WormBase:CRE04852" /db_xref="WormBase:WBGene00055862" CDS complement(join(1188521..1188774,1188830..1189219, 1189267..1189910,1189957..1190166,1190212..1190513, 1190636..1190748,1190797..1190935)) /locus_tag="CRE_04852" /note="contains similarity to Pfam domains PF00018 (SH3 domain), PF00241 (Cofilin/tropomyosin-type actin-binding protein); contains similarity to Interpro domains IPR002108 (Actin-binding, cofilin/tropomyosin type), IPR001452 (Src homology-3); coded for by the following C. remanei cDNAs: DY528753, DR408871, DR408057" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86568.1" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR002108" /db_xref="PFAM:PF00018" /db_xref="PFAM:PF00241" /db_xref="WormBase:CRE04852" /db_xref="WormBase:WBGene00055862" /translation="MTLNYHAHGKEIEASYRRVSDNSEHDKWVIYDYEGNSNTIRVKE EGTGGLEEFADSFSSGKLQFGVISVRLSSDVFPKIVLVHWQGEGVPTLRLASTTSHAE EFRRFLKTVHIVLHARSEIDVEPDVIRKEVRKLPSANASTNSESTYSLPEKVNSVYQP TNPQSELSSSARENFWSSMNQEEKKRQAEEKASHAEQLKRYEADRERTAADIQNKADN YQPDKVNSVYKPTKPHVELKTVNREEFWSKMNEEEKKRQEEEKVAREEAHRQYEADRQ RMAAEIHSHAENYQPDKVTSVYKPTKPHVEISSTAREEFWNKMNEEEKKRQAEEKESY ELKQKEFESDRKRIADNLHEKLQLSEKPAVPVASASSHVPNVTSSTSAATSSGLVGSR KEMFSAKPSDPILPKAQTNGGGAVKKWPPVGSNQDSAPREPVNRSNTDEGQTEELMSY KPEPMVYQPEPMVYKPDAMKPATHSYDAYEEPPAEPAPVVKSPISPPSFIAPTPLIAP PPPEPTPAHITSQYGAPQAVPTHYSSQYDAPPVQEPFESVIPPAPASSHYASQYDAPP EPVESFASYGENSQLPAHIASQYDMPPVMPEEPVITPIVVKSTVKAAPPIDQYDFPPA VTEQNAMALWDYQAADDTEISFDPDDIITDIDQVDSGWWKGRAPNGRVGLFPANYVKL I" gene complement(<1193588..>1197802) /locus_tag="CRE_04853" /db_xref="WormBase:WBGene00055863" mRNA complement(join(<1193588..1193695,1193743..1194612, 1194715..1194819,1194866..1195033,1195080..1195304, 1197743..>1197802)) /locus_tag="CRE_04853" /product="hypothetical protein" /db_xref="WormBase:CRE04853" /db_xref="WormBase:WBGene00055863" CDS complement(join(1193588..1193695,1193743..1194612, 1194715..1194819,1194866..1195033,1195080..1195304, 1197743..1197802)) /locus_tag="CRE_04853" /note="contains similarity to Pfam domain PF01704 UTP--glucose-1-phosphate uridylyltransferase; contains similarity to Interpro domains IPR016267 (UTP--glucose-1-phosphate uridylyltransferase, subgroup), IPR002618 (UTP--glucose-1-phosphate uridylyltransferase); coded for by the following C. remanei cDNAs: DY528499, DR779955, DR777658, DR778037, DR776813, DR781249, DR780960, DR778440" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86648.1" /db_xref="InterPro:IPR002618" /db_xref="InterPro:IPR016267" /db_xref="PFAM:PF01704" /db_xref="WormBase:CRE04853" /db_xref="WormBase:WBGene00055863" /translation="MAQRHVSVGCFSTFSEAEAKSSEEWKTSTKLEALGTMEGELAHL LSTCKPDKLAHNKTELSGFRNLFARFLRAKPTVDWSKIEPLPEGAIRSYKSLGTVSEK ELIAAQLRKLVVVKLNGGLGTSMGCKGPKSVISVRNDLTFLDLTMQQIQTLNKTYGVD VPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQYPRINRETLLPIVKSLEADDNE CWYPPGHGNFYEAFHNSGLLDKFIADGKEYCFLSNIDNMGATVDLSILNFVLNPPSDH EAPEFLMEVTDKTRADVKGGTLIQYEGRLMLLEIAQVPKDYVDEFKSISKFRIFNTNN LWAKLGAMKRIVTENKLEMEVIVNPKHLDRGLDVIQLETAAGAAIKSFRGAVGVNVPR SRFLPVKKTSDLLLLMSNLYDIDNGSLTLSHQRSFPTTPLVKLGSSFDKVKDYLGRFN GIPDLLELDHLTVSGDVWFGKDVSLKGTVIIIANHGDRIDIPPGSILENKIVSGNLRI LEH" gene complement(<1198668..>1201130) /gene="Cre-cyk-4" /locus_tag="CRE_04854" /db_xref="WormBase:WBGene00055865" mRNA complement(join(<1198668..1198877,1198921..1199673, 1199743..1200105,1200321..1200819,1200867..1200978, 1201025..>1201130)) /gene="Cre-cyk-4" /locus_tag="CRE_04854" /product="CRE-CYK-4 protein" /db_xref="WormBase:WBGene00055865" CDS complement(join(1198668..1198877,1198921..1199673, 1199743..1200105,1200321..1200819,1200867..1200978, 1201025..1201130)) /gene="Cre-cyk-4" /locus_tag="CRE_04854" /note="contains similarity to Pfam domains PF00620 (RhoGAP domain), PF00130 (Phorbol esters/diacylglycerol binding domain (C1 domain)); contains similarity to Interpro domains IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding), IPR000198 (RhoGAP); coded for by the following C. remanei cDNAs: DR409589, DY529678, DR406587, DR407858" /codon_start=1 /product="CRE-CYK-4 protein" /protein_id="EFO86722.1" /db_xref="InterPro:IPR000198" /db_xref="InterPro:IPR002219" /db_xref="PFAM:PF00130" /db_xref="PFAM:PF00620" /db_xref="WormBase:CRE04854" /db_xref="WormBase:WBGene00055865" /translation="MKSSTSKEKLCGENSRQMYNMIINSQKSRFDIKDIGMFHLIDEI ERLRKLWKESEESKKRLNIEMRETEEALAKARKKLAMFDIDVKDTQKHMRALMEENKA LKLDLNVYETREKQLKDAMKNGIFNSLTKEDRDQFQFLHEPLVRTYSKRVQQRHPHLM EETQDEEDDSEVDYDVTGDSFEEVYTLRNGREVRRSSAAGNPGGAKRRSASAHAASIA ANANSKRSRSRVMAATIDEEPNEGGTPPKRYRDDGAASPTLHQEVTTTTTTTTTTVQN SAQPRMSIHRQLTRRSLSVGSIPSCDHTPGQTTNNNGMGMSSAILTKSTLDIRTLKRG TPAWTNGTTRDIAMRPHSFVEAGIKAMRKCDKCGTALKLATSMKCRDCHQVVHRNCCN KLHLPCIPRPKTMMTPKSAGRGAKTGAGEFRLQDFCTAAKPMIPAVVIHCVVALEARG LTQEGIYRVPGSTRTVTMLLDELRSKTVPNVSLHDVEVITDTLKRFLRDLKDPLIPRT SRQELIAASNLYSTDPDNGRLALNRVICELPQANRDTLAYLFIHWRKVIAQSNRNKMN CEAMARMVAPAVMGHPIKQSQSQAIAGRDMQDCHRAITALFEFDDVYWQRFLGTSTSS HASSNQIESARHESVALCDRSILGPVTTSPATPLLSRSAIATRNRGAHLLGPMFHD" gene <1201408..>1202902 /gene="Cre-pdr-1" /locus_tag="CRE_04652" /db_xref="WormBase:WBGene00055866" mRNA join(<1201408..1201476,1201518..1201663,1201709..1201933, 1201977..1202187,1202234..1202324,1202375..1202579, 1202635..1202709,1202761..>1202902) /gene="Cre-pdr-1" /locus_tag="CRE_04652" /product="CRE-PDR-1 protein" /db_xref="WormBase:WBGene00055866" CDS join(1201408..1201476,1201518..1201663,1201709..1201933, 1201977..1202187,1202234..1202324,1202375..1202579, 1202635..1202709,1202761..1202902) /gene="Cre-pdr-1" /locus_tag="CRE_04652" /note="contains similarity to Pfam domain PF00240 Ubiquitin family; contains similarity to Interpro domains IPR000626 (Ubiquitin), IPR002867 (Zinc finger, C6HC-type), IPR003977 (Parkin)" /codon_start=1 /product="CRE-PDR-1 protein" /protein_id="EFO86696.1" /db_xref="InterPro:IPR000626" /db_xref="InterPro:IPR002867" /db_xref="InterPro:IPR003977" /db_xref="PFAM:PF00240" /db_xref="WormBase:CRE04652" /db_xref="WormBase:WBGene00055866" /translation="MPNVVTILLQDRKMDQRRNITLNVDNNENIAELMKNVEKLTNIP SEELEVVFCGKKLAKSTFMKDLSLTPATQIMFLRPKNLVQLTNSKFDSNNKITDTSIL GSFYVWCKKCDDVQRGKLRVYCQNCASTSVLVKSEPQNWVDVLKSKRIQVTCENCFAP GLFADFKFKCLKCNDLAAALTHVRGNWQMTECCVCDGKDKVVIDLGCNHIICQNCFKE YLLSTLEEFRFTNRPPYGFTTSCVYPGCNRVVKDVHHFHIMGQSSYSEYQRKATERLI SIDDEGVTCPNAACGQSFFWEPYDDDGRSQCPDCFFTFCRKCTERECTCQSDDDLTKI TIDATTRRCPRCNAATERNGGCAHIHCTSCGMDWCFKCVTEWKEECQWDHWFN" gene <1203213..>1204980 /gene="Cre-mdt-29" /locus_tag="CRE_04653" /db_xref="WormBase:WBGene00055867" mRNA join(<1203213..1203344,1203393..1203494,1203544..1203756, 1203804..1204070,1204117..1204494,1204541..1204801, 1204849..>1204980) /gene="Cre-mdt-29" /locus_tag="CRE_04653" /product="CRE-MDT-29 protein" /db_xref="WormBase:WBGene00055867" CDS join(1203213..1203344,1203393..1203494,1203544..1203756, 1203804..1204070,1204117..1204494,1204541..1204801, 1204849..1204980) /gene="Cre-mdt-29" /locus_tag="CRE_04653" /note="contains similarity to Triticum timopheevi Glutenin HMW subunit 1Ay precursor (Fragment).; TR:Q93XJ7" /codon_start=1 /product="CRE-MDT-29 protein" /protein_id="EFO86856.1" /db_xref="WormBase:CRE04653" /db_xref="WormBase:WBGene00055867" /translation="MSELFYFDNTCDQKKDIFLQVYRTIKQNMSGQGQQPNLTAQQQQ MILQQQQQHMMRQQHMQQQQMHQRQMQQQVQPTGQFQRARTPQMQQHAPGGSPGGSHL QMHPHLQPPGHMQPRSPLVGSQLNAPGSVPAGNPATPQMMHQQMGMNQPMSLPAPHIS RPASVAPPASVPPNLQTTGGGPPSNQMDSMGGQPQYPLHLQPQQTPSRPGSQQGQHVN NSHGGPQSVQQPTSIQRPGSVLAPGSIQQPESLGAPPSNSVIGGPQSVQGYGPGSVQP PGSAQAPSSAQPGSAFAPGSIQAPASQQPPSSIQPPPSAASSSAVGGATAAQNSKEPL KPNEEQIRMVQDPVDLVRNLVQKDLRNSVVEMNKRGADLVRQREEKNVNESDRAQFKR AANDFHAVCDEIDRTLTTVMETAKQLIKLEKVFMDRNSKELDGELMVNSVQSFVDNTD IVQKMFDETIGGVTASMEKMRRRQKKWEDLQKETQNNEDVEMIE" gene complement(<1205283..>1207500) /locus_tag="CRE_04855" /db_xref="WormBase:WBGene00055868" mRNA complement(join(<1205283..1205382,1205429..1205490, 1205537..1206253,1206432..1206558,1206616..1206841, 1206891..1207044,1207366..>1207500)) /locus_tag="CRE_04855" /product="hypothetical protein" /db_xref="WormBase:CRE04855" /db_xref="WormBase:WBGene00055868" CDS complement(join(1205283..1205382,1205429..1205490, 1205537..1206253,1206432..1206558,1206616..1206841, 1206891..1207044,1207366..1207500)) /locus_tag="CRE_04855" /note="contains similarity to Drosophila melanogaster Flybase gene name is CG17150-PD; FLYBASE:CG17150" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86849.1" /db_xref="WormBase:CRE04855" /db_xref="WormBase:WBGene00055868" /translation="MNKERNMKSARVEVLSELITVKNTNLETMKTEEEALKTAVEAMV SAPQEEFRRCVEELLKFSNADIKNLSKITKPSVGIRLCCEMLRTIFEPNFKPKRHAAE TWQESVKFVSEKSFFIKLATCDADILSVDQMKILKKYVERAEFNANKIEHESIVCACL CRWISAFLELACTLRVMEEQVEESKELREQIKQTEEKCENETNEMQQLKNDVEKLTNL IRENEQTLANDRRLCDYRLRSGDLLTALEPHRKQWKSQLKQNEKKQNELIGNTLLFSI HRSHLLCQEKTVSSVSFETKSHLNPFEFQMCISMCSSHLNSVSVPFDSSVATPSNVIN RIIRNLKTSRKFCLFISSSESLLLNLRTVLPSATYLDMSRVTWKDSQMSLLLSKHIYS IVPTVFFNITEAPPPEMYEILMKSEEREVCYHNKSYELPDDILFVFVAKSISHIPDQI KKLMEVIVVSSNLDPIDDAEKTERNELASLLGEFTAADILESKELSRKAMQMATST" gene <1207910..>1208899 /locus_tag="CRE_04654" /db_xref="WormBase:WBGene00078722" mRNA <1207910..>1208899 /locus_tag="CRE_04654" /product="hypothetical protein" /db_xref="WormBase:CRE04654" /db_xref="WormBase:WBGene00078722" CDS 1207910..1208899 /locus_tag="CRE_04654" /note="contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat); coded for by the following C. remanei cDNAs: DR781866" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86525.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF01484" /db_xref="WormBase:CRE04654" /db_xref="WormBase:WBGene00078722" /translation="MLDTSSENGREATPSGLPLCCLLGSHFLDCCRVLCKFLFETFPD KFKKRTFQLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRGSPKNASRF ARQAGYGTDEAVDQGNHGSQGGSCSGCCLPGSAGPAGTPGKPGRPGRPGAAGLPGNPG RPPAQPCEPITPPPCKPCPQGPAGAPGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGA PGAPGNPGQAGAPGQPGSDAQSESSPGAPGPAGPQGPPGPAGSPGAPGGPGQPGAPGP KGPSGAPGQPGSDGNPGAPGQPGQSGGSGEKGICPKYCAIDGGVFFEDGTRRK" gene <1210173..>1211133 /locus_tag="CRE_04655" /db_xref="WormBase:WBGene00078736" mRNA join(<1210173..1210253,1210300..>1211133) /locus_tag="CRE_04655" /product="hypothetical protein" /db_xref="WormBase:CRE04655" /db_xref="WormBase:WBGene00078736" CDS join(1210173..1210253,1210300..1211133) /locus_tag="CRE_04655" /note="contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86655.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF01484" /db_xref="WormBase:CRE04655" /db_xref="WormBase:WBGene00078736" /translation="MEEQQRLHAYRFVAYSAVTFSVVAVFSLCITLPMVYNYVHGIKT QINHEIQFCKHSARDIFAEVNHIRGSPKNASRFARQAGYGTDEAVDQGNHGSQGGSCS GCCLPGSAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGA PGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESS PGAPGPAGPQGPPGPAGSPGAPGGPGQPGAPGPKGPSGAPGQPGSDGNPGAPGQPGQA GGSGEKGICPKYCAIDGGVFFEDGTRRK" gene <1212342..>1213303 /locus_tag="CRE_04656" /db_xref="WormBase:WBGene00078745" mRNA join(<1212342..1212422,1212470..>1213303) /locus_tag="CRE_04656" /product="hypothetical protein" /db_xref="WormBase:CRE04656" /db_xref="WormBase:WBGene00078745" CDS join(1212342..1212422,1212470..1213303) /locus_tag="CRE_04656" /note="contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86725.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF01484" /db_xref="WormBase:CRE04656" /db_xref="WormBase:WBGene00078745" /translation="MDEKQRLQAYRFVAYSAVTFSVVAVFSLCITLPLVYNYVDGIKT QINHEIKFCKHSARDIFAEVNHIRGSPKNASRFARQAGYGTDEAVDQGNHGSQGGSCS GCCLPGSAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGA PGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESS PGAPGQAGPQGPPGPAGSPGAPGGPGQPGAPGPKGPSGAPGQPGSDGNPGAPGQPGQS GGSGEKGICPKYCAIDGGVFFEDGTRRK" gene complement(<1213345..>1217071) /locus_tag="CRE_04856" /db_xref="WormBase:WBGene00078752" mRNA complement(join(<1213345..1213454,1213491..1213596, 1213650..1213895,1213961..1214044,1214091..1214225, 1214374..1214976,1215039..1215099,1215786..1216271, 1216917..>1217071)) /locus_tag="CRE_04856" /product="hypothetical protein" /db_xref="WormBase:CRE04856" /db_xref="WormBase:WBGene00078752" CDS complement(join(1213345..1213454,1213491..1213596, 1213650..1213895,1213961..1214044,1214091..1214225, 1214374..1214976,1215039..1215099,1215786..1216271, 1216917..1217071)) /locus_tag="CRE_04856" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86821.1" /db_xref="WormBase:CRE04856" /db_xref="WormBase:WBGene00078752" /translation="MIIVTDEEDYAWLHKTKALFSTFIGIAMPPSTKFQDQKPLVQSL IAANFTAKALSQGAESEQAPGRPYFKVITTSSVQGQGAESEQAPGRPYFKVITTSSVQ GQGAESEQATGRPYFKVITTSSVQGQGAESEQATGRPYFKVITTSRALSQGAESEQAT GCPYFKVITTSSVQGQGAESEQATGRPYFKVITTSRALSQGAESEQATGCPVLRSFSS EYHHHLESFSSCIVEIKNLSSMALATRLAKSFFFAFPDNCPDPNALLRLFIHESARVV GNAIDPSHRSIFAQEFEALIDQNFSTTQQAVLKHIAQISDNEEEDEEQEGEEKRASTT IDMFDLIYSEVDAHDVVDGLSYEPVVDRVQFQRSIENFLFEHHRNHPKDRIRLFVDWE TSGWVQGVMRVIRQASEHMVLTAPPNSGRTQVVKAACVACNATMTHMQVDATCYDTFI SRWEYALSRAINIIANTNQHVVILVHLDFCYEKVEPRWMEQIKLWIECPNTQHLISDE QLHTMGEQLIECEKNLATQMQTIGLRLPGQRMCKYLPVETLKEPQALRKVLEARIFDA LHVMFLVDPQFKSDFSWCTIFHVPAIEKSHLLSKVSKIISDCKVDDAAQIIVSTFFIS KIKKYLQAIGIALPGTVFSQLFEVADCFQIVFRQQKK" gene <1217544..>1218280 /locus_tag="CRE_04657" /db_xref="WormBase:WBGene00055873" mRNA join(<1217544..1217811,1217871..>1218280) /locus_tag="CRE_04657" /product="hypothetical protein" /db_xref="WormBase:CRE04657" /db_xref="WormBase:WBGene00055873" CDS join(1217544..1217811,1217871..1218280) /locus_tag="CRE_04657" /note="contains similarity to Ustilago maydis Pre-mRNA-splicing factor CWC21.; SW:Q4P0G6" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86531.1" /db_xref="WormBase:CRE04657" /db_xref="WormBase:WBGene00055873" /translation="MKPAERRRRSRAASQAPRDSIGRFTPRKKTAGSSRLTARSVSRQ SRRRSRSARSASSYRSSRSRSGSRSRSRSSSRRRSISRKPVKGRRPNRFVLAAPVLVL DLDPFLLPENQVVVAFVVFALQKRNLAAEVVQSHLVAHPREAYQDVLLVVPLRNQKEN LVGQLGEHNNLYFKNTCSLSARLQSGVQAVAVAAVVAVDLAADTEMSNPREVIVWDLI VDKQRNN" gene complement(<1218471..>1225107) /locus_tag="CRE_04857" /db_xref="WormBase:WBGene00055872" mRNA complement(join(<1218471..1218755,1218801..1219214, 1219262..1219823,1220163..1220830,1221224..1221337, 1221383..1221998,1222051..1222351,1222396..1222501, 1222546..1222681,1222728..1223188,1223234..1223414, 1223459..1223661,1223721..1223966,1224008..1224131, 1224178..1224300,1224349..1224448,1224494..1224627, 1224673..1224961,1225005..>1225107)) /locus_tag="CRE_04857" /product="hypothetical protein" /db_xref="WormBase:CRE04857" /db_xref="WormBase:WBGene00055872" CDS complement(join(1218471..1218755,1218801..1219214, 1219262..1219823,1220163..1220830,1221224..1221337, 1221383..1221998,1222051..1222351,1222396..1222501, 1222546..1222681,1222728..1223188,1223234..1223414, 1223459..1223661,1223721..1223966,1224008..1224131, 1224178..1224300,1224349..1224448,1224494..1224627, 1224673..1224961,1225005..1225107)) /locus_tag="CRE_04857" /note="contains similarity to Pfam domain PF08393 Dynein heavy chain, N-terminal region 2; contains similarity to Interpro domain IPR013602 (Dynein heavy chain, N-terminal region 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86788.1" /db_xref="InterPro:IPR013602" /db_xref="PFAM:PF08393" /db_xref="WormBase:CRE04857" /db_xref="WormBase:WBGene00055872" /translation="MNTQNTPFISHLITFESLASQVIMSNLLEKEHFKLRKHTRYLTI HRVVEQKSWHQLAYEDRLRRENRKIPKICRKNFLRWHLEQLEARKKLRRLREKNQDES IYVAKQWYYVLKKHPLKPRIEWSYQRVHKLSSKNERIAQELEELIDCAERYALIEHLS DEFRKKEQLILMKLKKIERYRLEVNNNRELLLRSQSLAAMKIRIFFEHRKGLIFDINE IINPEIGNMAIRKFRETLLAKITEFSNEINTKLLRKNWKDEKKRNIVQNCIVQETTNA AFGTIQSYLKTLRNKSSFIAIECMIVDRKLWVNSEQIRLLLKEPIRVMCSLESVRMST EDCETWQEEAMMSVDVLSHENISNHQFLQPYVFLVDDYKVSPKLTEEELIKMYDDSTH LQIRLTKAPKFLTVRCFVLRLESVWTEMERRIRSFRNQLKTAIRRKFTTLLNKLLHDF RKYDRALQYRSIDPSMMLNNKAQVDLMLQNEIGDSARQFVDVYDKVFEITQHISLDTS QMDTLLQIASLRLSLPQCINDHAHFFQKRISTFLHFVNVGILLKHILFFFIQKKQAKV MASVQKAMDKLKIVQTMGNPQEVETYLTQMTKLRPMLDSLITEIEDLNKFEKAVDIQV SDVTKMRLFVGEIESLQSLFVATSGYYKHVNAFFESRRTLVNIDASRNFIEQFTVQLS VFESSLATHRAAKHFIAYARNEVDTFKKNFSVAEVMSCRRLLDAHWLRMSEIVGFDLT PYANSSIAQICELGLEAHLQQLKPIAFSAEREATAADQLHSIVTFWSQEHLEMRFHVQ WKLSLAVKLRDLHSRVQTDINTLKHMTNVEQITDDSLPQWIEWTCRTETILKAWCETQ QKWMRVANIFVTCRDTLQVSFDSNIQQDLYYLLQKEYELLRTCAKYFIKIERNVVKDA TIYRVMQLPHLPCWIEKIRKMVVVIIQGVRGLLDGMRMINSRLCLSSELHLLNLFSTT SIDTRLQLLLKDCFPSLRRLCFNRRNQLELVDLLGEKVTVDLTKTEIESQEPCELIRS IETAFASKLTDIITYERQDRSKAASRIGANVGELIETRQTLDPLFLSRVEKAYYIQHK SVQRQSLLTVDFVYSNETNRFIPKSLADNWSSGHIILLIGEVCSTRSFVLKLSNCLCS NLRIVNSHNLLESAFLERLTKCIPMTNWFVLLENVDLLTSQIAFNLFKMLSTQTVPFP RLFISSTEEIKNQLPTAIAIEHLRTTSEHLGGIRDLIDDQHKSSPSFKFETTTPLSSV RSASIPTASRLPAQGNPSIQPPSSPHSLLLEKLGTRIRNREISGCVGPMAKETLKETL DHFAEKVVWIYIDVFIRDQLVVHSDEFAASPSGILFEVLSPNIQPSNGSESERSYHST ISTNSVFINTIVVFYGFSEFWNIFPFISPLFLKKTGYSSQTPPFLTLDDGSTYWPQEN VQFLMCIPDEEGFHLNTVKKFDIPFHVVNENLKMNVARSWRKIWQRNYSELFNKISLI EIMDELVDRILSPMSSYFSETFLWPSTLFQVIYQDLTEVIPLSRTTSVNDTLRITVIL ATANYISIFCDDQKKVEAKLGKCLVSIREKLSIQIPEDVCNWKISYQDATKLVRWEEE PFCQSSIDKDSAIGNIMIVTPNMDRLLFYSIRLLSSGHNILVHGPPYSRKTMFVKMIS KFLSSIGSEVQVEFIWLDGKSRVGNDVAQKVFANIVDTCEKTHQSKQLVSAHS" gene complement(<1225710..>1226937) /gene="Cre-act-5" /locus_tag="CRE_04858" /db_xref="WormBase:WBGene00055874" mRNA complement(join(<1225710..1225869,1225921..1226387, 1226437..>1226937)) /gene="Cre-act-5" /locus_tag="CRE_04858" /product="CRE-ACT-5 protein" /db_xref="WormBase:WBGene00055874" CDS complement(join(1225710..1225869,1225921..1226387, 1226437..1226937)) /gene="Cre-act-5" /locus_tag="CRE_04858" /note="contains similarity to Pfam domain PF00022 Actin; contains similarity to Interpro domains IPR004001 (Actin, conserved site), IPR004000 (Actin/actin-like); coded for by the following C. remanei cDNAs: DY524657, DR776305, DR781929, DR782357, DY526659, DY524986" /codon_start=1 /product="CRE-ACT-5 protein" /protein_id="EFO86620.1" /db_xref="InterPro:IPR004000" /db_xref="InterPro:IPR004001" /db_xref="PFAM:PF00022" /db_xref="WormBase:CRE04858" /db_xref="WormBase:WBGene00055874" /translation="MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP VLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVT HTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCY VAHDFESELAQAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHE TTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPE RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF" gene <1228968..>1230600 /locus_tag="CRE_04658" /db_xref="WormBase:WBGene00055875" mRNA join(<1228968..1229044,1229098..1229203,1229252..1229360, 1229412..1229572,1229601..1229901,1229948..1230114, 1230156..1230222,1230266..>1230600) /locus_tag="CRE_04658" /product="hypothetical protein" /db_xref="WormBase:CRE04658" /db_xref="WormBase:WBGene00055875" CDS join(1228968..1229044,1229098..1229203,1229252..1229360, 1229412..1229572,1229601..1229901,1229948..1230114, 1230156..1230222,1230266..1230600) /locus_tag="CRE_04658" /note="contains similarity to Interpro domain IPR000577 (Carbohydrate kinase, FGGY)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86713.1" /db_xref="InterPro:IPR000577" /db_xref="WormBase:CRE04658" /db_xref="WormBase:WBGene00055875" /translation="MTTEKVHVGIDIGTTSAKICAKKGKDVIFESKRVYEIDEKESEN GIQNTKLILNTVIGLLKTIREKFENENLQISDIWTCGQMHGIVFWDQDSVETSDFLNT SSLYNWTYSTPNLQNFLKTLPKWNSGEIHPGFGLVTLAYLNNSSPDSLKKTFFQKYNR CGTIMDLFLTYLTQNSKCFISQHNAFSWGYCSSDYTWQPEIQKFLPNWIELPTIAQDN SKVVGTWNGIRCHVASGDLQASVASLDSFKKTAYIIIGTSSQLCCLVDSNQLSTTVLP STVVQLPYSDSQKLIAACSMNGGNALESVLKTNADKTFSSDRLCQLLVELDNTVPRLP TNLKIDPIFIPERGVSKELSIQNVRSDTTDIQILEATHEGIINNLFSLFPVSLLFTLS IKTIALVGSSQSTRFRRHIESVIDANFEVITSASAISTPAGAINFSKI" gene complement(<1230718..>1232306) /locus_tag="CRE_04859" /db_xref="WormBase:WBGene00078731" mRNA complement(join(<1230718..1230845,1230905..1231364, 1232253..>1232306)) /locus_tag="CRE_04859" /product="hypothetical protein" /db_xref="WormBase:CRE04859" /db_xref="WormBase:WBGene00078731" CDS complement(join(1230718..1230845,1230905..1231364, 1232253..1232306)) /locus_tag="CRE_04859" /note="contains similarity to Interpro domain IPR006636 (Heat shock chaperonin-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86609.1" /db_xref="InterPro:IPR006636" /db_xref="WormBase:CRE04859" /db_xref="WormBase:WBGene00078731" /translation="MMRNGATRKEKIERRRDRAHKIQEYNRAVERQKAEIELAERRER VRRAQEANKKAAEEEAKRQAENEDYDFDDNFPGGMPGGFPGAGGMPGGFPGAGGMPGG FPGAGGGPGAGGPGLDSLFSDPDILAAFQDPEVMPALMDIMKNPSNIMKYASNPKIAT LISKLQAKGAGMPGMFGGAPPGATGGCDDADCGGPCGGGSAPPPRRAPEPDLD" gene <1232553..>1233564 /locus_tag="CRE_04659" /db_xref="WormBase:WBGene00078746" mRNA join(<1232553..1232607,1232683..1232775,1233035..1233366, 1233409..>1233564) /locus_tag="CRE_04659" /product="hypothetical protein" /db_xref="WormBase:CRE04659" /db_xref="WormBase:WBGene00078746" CDS join(1232553..1232607,1232683..1232775,1233035..1233366, 1233409..1233564) /locus_tag="CRE_04659" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86737.1" /db_xref="WormBase:CRE04659" /db_xref="WormBase:WBGene00078746" /translation="MPSFYPIFIFLLFLSSCLAGPTIIITGPAENNEAKIEYLGRYLP QAVLKNVASTESDILIYNRVGNRDTLIEDSNKVQQLGGVFLEKNVSTVVFIRDKYEYL NAEELFVLEHLLRTDRSLSVVHFEEKAESSPIWLEHSDCFATGTVDSKIGNTVYFCNK ETDSVLNEILNERIPIDKVVSLPSSSFFFANAASKKYRIDKKKVCKEETDL" gene <1233583..>1236604 /locus_tag="CRE_04660" /db_xref="WormBase:WBGene00055877" mRNA join(<1233583..1236430,1236474..>1236604) /locus_tag="CRE_04660" /product="hypothetical protein" /db_xref="WormBase:CRE04660" /db_xref="WormBase:WBGene00055877" CDS join(1233583..1236430,1236474..1236604) /locus_tag="CRE_04660" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8Q8F7" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86598.1" /db_xref="WormBase:CRE04660" /db_xref="WormBase:WBGene00055877" /translation="MEEELEDEIQDIVEESMKTVEKRKKDSEDDDDDEDDNDFDNKHD PKRDHRLHCKYRKSCYATGKRGLIEPYDISFDHLFHFWRAPSSQQHHLPKTEDADQDG VPDSEDDDVNLADRKLVCKYRTACYKDHNIPLSDKQQERERSFMSAKLQAPQGKKRTL KEIAQKAVSGVEEREKEVKTRPLSKSLIVEKKLQEIENQLQKKLDCKYRRSCYETGKL PDIEETSFSIPFLYPESEKNDDDDDEEDKKSFEEMNDLEKKNYCKYRKSCYESGTKPE IDSELAIESFRDILDMPDVVETRKLTLQERCKYRKSCYKTGILPDLSQDDEHIEKVIN KEVSSVVPSTVQDLKTLCKYRKSCYQEISESSSADIVQTIRKRRLIEKEVRKRRTRRH RRLHKRRAMMTRYGMTTGSGSKYDKVEKTQKELQDIADARENRKDAPAPKSVKIHGKK KVVEETIETETDGTTSSQEQELNEDEKKTETESKKNEKNTASSEKDKENEEVADFQPE PETVKKTKRSLKKVKKPEIDKNEDDEPESTPEPVKKTKKNLKKGKEAESENDQPVIPV PIPVKSGIKRSQKEPEEEQKTMRTTEDDDDMPLQEKKSRVEKVSSVPSKKSVSDENDD DDDGNEFDNKHDPKRDHRLHCKYRKTCYETGKRGLIEPYDFSVWHLVHFWAAPPSQQH HNYGKQKDSDGDGVPDIEDKDTAMVNRKLSCKYRPSCYEEYGIPIEEKFLEREQKRTV KPEASDDDDGRYEDERKIDLKAADRRLECKYRRSCYDSGVLPTIQQWSDAPTLSETIE TSSKNKKFQKCKYRKSCYEAEGITDKDSDVENKEELKKSHIQETMKPVETQKDRHHHQ SKHGKKKHQEPEDSDEEDDEKEDQKEKQKKNKEEKKEEDKVQKQSDKETLEQEVKEIS LSVAEKSWCKYRKSCYSSVEPKAAKQDHSGSMARRAGSGQKCHIYYLSCREAMGLPPK EKAPMGPNGKRLCRKVKKDT" gene complement(<1236712..>1237594) /locus_tag="CRE_04860" /db_xref="WormBase:WBGene00055876" mRNA complement(join(<1236712..1236738,1236788..1237001, 1237060..1237443,1237491..>1237594)) /locus_tag="CRE_04860" /product="hypothetical protein" /db_xref="WormBase:CRE04860" /db_xref="WormBase:WBGene00055876" CDS complement(join(1236712..1236738,1236788..1237001, 1237060..1237443,1237491..1237594)) /locus_tag="CRE_04860" /note="contains similarity to Pfam domain PF00515 Tetratricopeptide repeat; contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR008940 (Protein prenyltransferase), IPR001440 (Tetratricopeptide TPR-1), IPR013026 (Tetratricopeptide region); coded for by the following C. remanei cDNAs: DT936253" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86530.1" /db_xref="InterPro:IPR001440" /db_xref="InterPro:IPR008940" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="PFAM:PF00515" /db_xref="WormBase:CRE04860" /db_xref="WormBase:WBGene00055876" /translation="MDHVSLLKQFVGMCQTNPGVLHSPEFAFFKDYLVSLGATLPPKP AEKPAPEGKCPMSEEPKEPKEQNKQNEEKPAESEIPKPAEIPFPEIDNEGVIEAEEAV ALPMGDSSKEPTDEEVEKASEERGKAQEAFSNGDFDAALTHFTAAIEANPGSAMLHAK RANVLLKLKRPISAIADCDKAISINPDSAQGYKFRGRANRLLGKWVEAKTDLATACKL DYDEAANEWLKEVEPNKFYIIIIV" gap 1238965..1238974 /estimated_length=10 gene <1240200..>1240861 /locus_tag="CRE_04661" /db_xref="WormBase:WBGene00055879" mRNA join(<1240200..1240277,1240370..1240506,1240572..1240678, 1240755..>1240861) /locus_tag="CRE_04661" /product="hypothetical protein" /db_xref="WormBase:CRE04661" /db_xref="WormBase:WBGene00055879" CDS join(1240200..1240277,1240370..1240506,1240572..1240678, 1240755..1240861) /locus_tag="CRE_04661" /note="contains similarity to Pfam domain PF00036 EF hand; contains similarity to Interpro domains IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86882.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="PFAM:PF00036" /db_xref="WormBase:CRE04661" /db_xref="WormBase:WBGene00055879" /translation="MDDLADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIH RCVGSFDKEARLSFEDFVPIFQSVSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRH LLTTLGERLSDEDVDQLLAGHNDSHGNVNISDFVRAVMNS" gene <1241171..>1242252 /gene="Cre-taf-9" /locus_tag="CRE_04662" /db_xref="WormBase:WBGene00055880" mRNA join(<1241171..1241314,1241400..1241683,1242129..>1242252) /gene="Cre-taf-9" /locus_tag="CRE_04662" /product="CRE-TAF-9 protein" /db_xref="WormBase:WBGene00055880" CDS join(1241171..1241314,1241400..1241683,1242129..1242252) /gene="Cre-taf-9" /locus_tag="CRE_04662" /note="contains similarity to Pfam domain PF02291 Transcription initiation factor IID, 31kD subunit; contains similarity to Interpro domains IPR003162 (Transcription factor TAFII-31), IPR009072 (Histone-fold); coded for by the following C. remanei cDNAs: DY529733" /codon_start=1 /product="CRE-TAF-9 protein" /protein_id="EFO86850.1" /db_xref="InterPro:IPR003162" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF02291" /db_xref="WormBase:CRE04662" /db_xref="WormBase:WBGene00055880" /translation="MAESGEKDAEATTNAADGYSKEAVTIIGLLGECGINEFDPRVVS MLMDVQYAVTSKVLQVASGLSRHAEKQRIETDDVQTAADILGVLSSNTPDREKILQMA NDKNQQPLPQIRHNYGLKLPNDRFCQLQQNFVYKADDSYQEMEMQQVAHPPRIIEPPS AVLRPEHVQNMLKRRAPEDDFDS" gene complement(<1242407..>1243057) /locus_tag="CRE_04861" /db_xref="WormBase:WBGene00055881" mRNA complement(join(<1242407..1242507,1242556..1242754, 1242888..1242936,1242984..>1243057)) /locus_tag="CRE_04861" /product="hypothetical protein" /db_xref="WormBase:CRE04861" /db_xref="WormBase:WBGene00055881" CDS complement(join(1242407..1242507,1242556..1242754, 1242888..1242936,1242984..1243057)) /locus_tag="CRE_04861" /note="coded for by the following C. remanei cDNAs: DR780657" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86848.1" /db_xref="WormBase:CRE04861" /db_xref="WormBase:WBGene00055881" /translation="MKQSVALLVVVFFVFCSLGETKKPKAQRVIYVQKVAAAPKPLTE YELCKQECRIQRDAQSTKDRVEQLKQELEEAEQLLADHNKNVDAPEIAPERAEAAGQV PTARRASRFDHLKMAANKIVESTSELKNAVTGGASDNE" gene complement(<1244021..>1245998) /locus_tag="CRE_04862" /db_xref="WormBase:WBGene00055882" mRNA complement(join(<1244021..1244339,1244384..1244560, 1244613..1245187,1245237..1245602,1245644..1245875, 1245922..>1245998)) /locus_tag="CRE_04862" /product="hypothetical protein" /db_xref="WormBase:CRE04862" /db_xref="WormBase:WBGene00055882" CDS complement(join(1244021..1244339,1244384..1244560, 1244613..1245187,1245237..1245602,1245644..1245875, 1245922..1245998)) /locus_tag="CRE_04862" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00017 (SH2 domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86754.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE04862" /db_xref="WormBase:WBGene00055882" /translation="MGSRDNGSRELFTQSLYAQSVPVGAKKEKEKDKDMSMAPKSMPA TPTPTSTSMSRNPSSSPATTPSKGEMPRNDKSCDRRDDRKEKEEKTMGDRGRERERQQ ETTQQPTENSLLGKAPPDAEKKKKKKKGRGRITSAGSCSVADDKTVNATERDDFPVLE KKLREFNFYHGFLPREDLQSTLQNPGDYLLRVSEVVEGETKVNREVILSLIPILVEGK DEDDKKKCRNVCIKRVQQSNKFFCEMTRLFDSISDLINYYTKNTGTCSAGTFQLKTPI LQQPWEFMHSDVTVGDKLGEGAFGKVCQGTLKLKDGSTVEVAIKMTKVSAFLSKIKIK EMMNEARFIRNFNNKNVVRLYGVAHDEQPLYILLELVKGGSLLDHLKAAKTNGTIVTV AERIKFCIGAGKGIEYLHRNNCIHRDIAARNCLLHDKEVKITDFGLSRTGPSYKMKTS CKLPVKWLAPETLSTFTFSYATDVYSWGITCNEVFADGAEPFEGVSNAVVKADTMALK FLPMHPNCPEAIRKYMGNFIFVDGGRRATMSMALVEFDRLTLVCENGGMDGGGAKQKI LKVFKKKHEKQSKGD" gene complement(<1246508..>1248964) /locus_tag="CRE_04863" /db_xref="WormBase:WBGene00055883" mRNA complement(join(<1246508..1246607,1246651..1246793, 1247238..1247408,1247455..1247707,1248115..1248251, 1248304..1248474,1248519..1248652,1248746..1248836, 1248884..>1248964)) /locus_tag="CRE_04863" /product="hypothetical protein" /db_xref="WormBase:CRE04863" /db_xref="WormBase:WBGene00055883" CDS complement(join(1246508..1246607,1246651..1246793, 1247238..1247408,1247455..1247707,1248115..1248251, 1248304..1248474,1248519..1248652,1248746..1248836, 1248884..1248964)) /locus_tag="CRE_04863" /note="contains similarity to Pfam domains PF00339 (Arrestin (or S-antigen), N-terminal domain), PF02752 (Arrestin (or S-antigen), C-terminal domain); contains similarity to Interpro domains IPR011022 (Arrestin-like, C-terminal), IPR011021 (Arrestin-like, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86535.1" /db_xref="InterPro:IPR011021" /db_xref="InterPro:IPR011022" /db_xref="PFAM:PF00339" /db_xref="PFAM:PF02752" /db_xref="WormBase:CRE04863" /db_xref="WormBase:WBGene00055883" /translation="MVQLDRFEIVFNNPEEAYFAGQEISGKVIIENKEPKKVNEILLE LKGRARTYWTKHSGKSRKHCSHSEPYFLEQFNTGYTHKFTIVKDGKEKERVLPAGIHQ VPFSYTLPKSLPSSFEGEFGHIRYTCKAICERPWDFDIVSRKAFTVVGIEDINSDPKL NEPITCIESNHAVTFCCRSTGSVTGEIRIPKCGFTPGEKIDVSYKVINLSSKTRNTAL RFVQQTTYKAKTFAGHEHIKTVVRVISKIDKGEVPGGTTTEWQEESIIIPSLPPKLGK CKILSVNYAVELEVEQTLTVPCSIVIGSIPQLAQLLIHSKQSVQSSGNGSIPKSSIKD SPPKWDSESCVQVTITDESGQLVEELGNEMEALLSARKRVRMPSSILSELYPTMPSPY YKESFFGPSDISEEKEQAQFGETSFAPKYPFYTD" gene <1257436..>1257774 /locus_tag="CRE_04663" /db_xref="WormBase:WBGene00078741" mRNA <1257436..>1257774 /locus_tag="CRE_04663" /product="hypothetical protein" /db_xref="WormBase:CRE04663" /db_xref="WormBase:WBGene00078741" CDS 1257436..1257774 /locus_tag="CRE_04663" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86706.1" /db_xref="WormBase:CRE04663" /db_xref="WormBase:WBGene00078741" /translation="MTSPKDDIFSAHPLTAAELAAQKRKAYSEEAWRRYQEYQKRWKK FRQTQKTPAPGASISGASTSKQSGASPEGGGQAGTGPSTRSQSVTSVASGNISPSTFS CKIHRKAEVA" gene complement(<1259918..>1260958) /gene="Cre-acbp-5" /locus_tag="CRE_04864" /db_xref="WormBase:WBGene00055885" mRNA complement(join(<1259918..1260054,1260125..1260242, 1260290..1260451,1260499..1260701,1260754..>1260958)) /gene="Cre-acbp-5" /locus_tag="CRE_04864" /product="CRE-ACBP-5 protein" /db_xref="WormBase:WBGene00055885" CDS complement(join(1259918..1260054,1260125..1260242, 1260290..1260451,1260499..1260701,1260754..1260958)) /gene="Cre-acbp-5" /locus_tag="CRE_04864" /note="contains similarity to Pfam domains PF00023 (Ankyrin repeat) (2), PF00887 (Acyl CoA binding protein); contains similarity to Interpro domains IPR014352 (FERM/acyl-CoA-binding protein, 3-helical bundle), IPR002110 (Ankyrin), IPR000582 (Acyl-CoA-binding protein, ACBP)" /codon_start=1 /product="CRE-ACBP-5 protein" /protein_id="EFO86846.1" /db_xref="InterPro:IPR000582" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR014352" /db_xref="PFAM:PF00023" /db_xref="PFAM:PF00887" /db_xref="WormBase:CRE04864" /db_xref="WormBase:WBGene00055885" /translation="MFIAWFVSEFQNRTGENNSTYSEQPIDQLLEAKFNAAASRLPAF RLQLDRKTGLKFYGLYKQAILGPANAKEGPYWYETEARTKFNAWLANGKMSRGTAMQK YCDMLSILDKDWDPNAETQKQTWDKVPSTMGVIEPEMFDDFVAPKPTRLETDSEKSWF AAMRVNDVATMKQLLDEDPNILEAKDQHLAMTALLWAADLGCDPVVKFLIDHGADVNA VDGCLQTALHFTAQCHRPLLAEILIQAGADKSALDADGLTPADCCDDAELREKLTP" gene complement(<1261201..>1261606) /locus_tag="CRE_04865" /db_xref="WormBase:WBGene00078739" mRNA complement(join(<1261201..1261342,1261398..1261495, 1261544..>1261606)) /locus_tag="CRE_04865" /product="hypothetical protein" /db_xref="WormBase:CRE04865" /db_xref="WormBase:WBGene00078739" CDS complement(join(1261201..1261342,1261398..1261495, 1261544..1261606)) /locus_tag="CRE_04865" /note="contains similarity to Pfam domain PF01722 BolA-like protein; contains similarity to Interpro domain IPR002634 (BolA-like protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86688.1" /db_xref="InterPro:IPR002634" /db_xref="PFAM:PF01722" /db_xref="WormBase:CRE04865" /db_xref="WormBase:WBGene00078739" /translation="MCSPADRVKELLTNAIKPQKLNVVDESGGCEGFKFRILIISEAF GGKRTLQSHRMVQAALAPIMGETHALTICAYTPEKWSQMTSDDRLNAGCLDLADDN" gene complement(<1262224..>1263080) /gene="Cre-drr-2" /locus_tag="CRE_04866" /db_xref="WormBase:WBGene00055886" mRNA complement(join(<1262224..1262363,1262415..1262645, 1262695..1262890,1262934..1263017,1263060..>1263080)) /gene="Cre-drr-2" /locus_tag="CRE_04866" /product="CRE-DRR-2 protein" /db_xref="WormBase:WBGene00055886" CDS complement(join(1262224..1262363,1262415..1262645, 1262695..1262890,1262934..1263017,1263060..1263080)) /gene="Cre-drr-2" /locus_tag="CRE_04866" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1); coded for by the following C. remanei cDNAs: DR775709, DY529437, DY526050, DR778275" /codon_start=1 /product="CRE-DRR-2 protein" /protein_id="EFO86573.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CRE04866" /db_xref="WormBase:WBGene00055886" /translation="MADEIFKAFIGGLPFDSLESDIETLLEHCDFTKEDIKKFEIHLV HDRETGTCKGFGYVTFQSEQQLNDAIKKLNGVEFAKRVLKVNRAQQRDRSDRGGRGGG RGNFGDRGGRGGRGGGGGGGFRRGGGGRFNDGEGRGGFGGGGNRGYGRQRKESEEFGG SQHEDGHNPRHRRPSEEGSAPSAPAAERPRFNFKPRTTDAAEIEARKKLEEEETKRRQ EKLFQ" gene <1263639..>1272412 /gene="Cre-set-16" /locus_tag="CRE_04664" /db_xref="WormBase:WBGene00055887" mRNA join(<1263639..1263644,1263690..1263791,1263837..1263913, 1263980..1264411,1264664..1265348,1265393..1265904, 1265977..1266221,1266265..1266873,1266920..1270002, 1270310..1270666,1270714..1271793,1271838..1272086, 1272320..>1272412) /gene="Cre-set-16" /locus_tag="CRE_04664" /product="CRE-SET-16 protein" /db_xref="WormBase:WBGene00055887" CDS join(1263639..1263644,1263690..1263791,1263837..1263913, 1263980..1264411,1264664..1265348,1265393..1265904, 1265977..1266221,1266265..1266873,1266920..1270002, 1270310..1270666,1270714..1271793,1271838..1272086, 1272320..1272412) /gene="Cre-set-16" /locus_tag="CRE_04664" /note="contains similarity to Pfam domains PF05965 (F/Y rich C-terminus), PF05964 (F/Y-rich N-terminus), PF00628 (PHD-finger) (3), PF00856 (SET domain); contains similarity to Interpro domains IPR001214 (SET), IPR003889 (FY-rich, C-terminal), IPR001965 (Zinc finger, PHD-type), IPR003888 (FY-rich, N-terminal), IPR003616 (Post-SET zinc-binding region), IPR013083 (Zinc finger, RING/FYVE/PHD-type); coded for by the following C. remanei cDNAs: DT934551, DR779045, DR409232" /codon_start=1 /product="CRE-SET-16 protein" /protein_id="EFO86569.1" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR001965" /db_xref="InterPro:IPR003616" /db_xref="InterPro:IPR003888" /db_xref="InterPro:IPR003889" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00628" /db_xref="PFAM:PF00856" /db_xref="PFAM:PF05964" /db_xref="PFAM:PF05965" /db_xref="WormBase:CRE04664" /db_xref="WormBase:WBGene00055887" /translation="MICIECGGAAVNNTELCQSCMEMNSTGTMSLDMARQCDISMSCG SCQRMVTADSRQCSSCQKSFHLSCDSSEVSHLNGFICSLCRRRKQILSEDVMLSASVV SSRSQNAPLSPFSDPSVQQMSLHMSSGTMSSSFPNPDFGGDIYSQMTVSSSMNQHQHH VQQMLTTQSQLMDDISDGGATNDSDRNSSPFYQETSDYDEDFVLTSTRGRGRGSGKKK PGRGQSTGSRRQTNPGPTGFFSATQFQAMGDFSQPTPTRGKRGKRGNGITTPRSSGKG PGRGRGRGRGSAAQIASQLQQVQYGNPAPMGMPMYHPGNPQLMHMNSVGFQMMPQNSI GLSSTIQSTQIPPSVPLPSSIMNNAVPIALPPPVQTPLPEQSPTIVPNFQETNKIDTI REVDESILEDENSRQSGTSRSDEVEYTRISIVCRSNDEFMGKAPLCLVCGSIGKGVEA SMVACSNCAQTYHTYCISLHDKVGSQMIIKMLSTIIFQKFQLNSAVITRGWRCLDCTF CEGCGAGGDEEKLLLCEECDVSYHMYCIKPPLEAIPKGPWRCQWCSRCRRCNHKSTSG NDLTSKGLCHSCQSLQSCSRCNRGYQLNEKIIKCSQCSKWHHGFCEGLHTDEQLEQAA LNRMRCTSCRPNRAQINGFSEADTVWCDNVALDRNAHEILKSKYTPSALKSQMQEYRE SFDHYEEDFTPQDDAPEPGSSLSISGQRGRGRGNPSGRRGMNRIGIGGFYAKLPRHRI QALTEEAAAEEDDTKKAKRPRKPRRSQLEDAYPPQIQEAFFGIKAVEGKSLVEYNIEE PMLAEFNGRYVRERPLKSHALCKDAAEMLRNDQTENDILEGIDFGNMDTDINFDEMDL SIFFDEDDEELEDSLQGETHPKRELPEGSYGPTTFNLDQKPSTSTGGMSSGMLGPQDG NLNGMNPVNFAQHAPGVRTAIARSGSHSDAPDRYQFSARWEEDEPAGLMATTAAVLYA NEKHPHLKVQLPIWSDRVKQIQKLWRNLSSDDRQEYVNRARDNRTKSGSKPRPRRTNV QSTNSVDSPTVQSPAPHQFGFKVPTNPGEPSSSSAFGSQIEQSQQPKQVRVTNHLSAV FYNTWQEMRRVKLDRERLLASLEEQLNKARKQKKNLAAKKRQMVRTQQAAPDYDGRQI DLNDNDQKVLAQLTEQIKSTQGEMENMKKDVKSQDTALHQFELHNKILRNESEVTPLQ KEQTHLRELQFAAHAEQMLAQPPPLGLGMNPSQGHPQPGTQAPINLPLLQQQQQRMLH LQGVPMMRPGPGQFIIRQQPGAPPMTMQQHQQQQQEMHRRMVIIRFPHFETNKKLQVQ MRHPALIMGGVRFDEITDPVMKEAYQCLDAILADVHQHIESQKEVHHPMHGGPPAHIM QRMMHHQGAPIPRLIMPGQIPQGQIPPQHHPGVQLVQQHPPMTPQSAQPLNIAEDGPK PKKKRNNQKKATSSYPAGGEYESWLETMRTRFRLCGDIPKKQREPRLNRAGCEFVKYG LTEMAVVGERKPLLGEFGAMHVKRGTRIFGNEERAQKALIFNDVNMYQVEPPIRLVAL YNNTMPTSEDDVIQDEMDENTCLNPNAALCKLFNKKHTVRDHIRCCVRYMDEGKAPIQ PESSMFNEIIDRDEEVTVELVFNTSDIGEESSVEDKKDLVFKLNEKLKDLLALKEEVP WKMEDTPPESPICFSPEPEGISEGIRQTTSTSRAPSASVEKEIKKEEDEDASAAPVFR EVKNEVVDSTQQYQCKQCNVSSDGVPALRVTMAKLGVLSQEATLEEKDEMVSFCSRKC YFELMSLSRSALTHEELTAAEQVVSEEIYNKLKQIYSDNIVKAVNQGKKPPAAAFSAS SLIGSTEHLVSPRDTRYMMDEGKKDNIIIVPVSSLIGAVDAPKEAPPQRTAAGEDWKA YTQDIHESFINIQQQHVQCILSPKIGVPHPPYELDKRICVFCGGVGDGETFRCGRLIS LTEYYWVHVNCALWSAEVFEHPSGWLTNVDRAVVRAAQTACDHCKQPGASVKCHKMNC GANYHVLCAMQHNGFFIKDRTFICKLHEKVTNVVLRLDALRKIYIKRDENSLLMRLFD LSDGPNLCLRIGAFAFHKLGSINPSQLKKFHNKDYIFPSKYRATRLFWSPKNARERMM FECRIEEKNDLPFFVVQSLEDSSICHRGFSATKAWQPIFERVNQLRDQQQGEVLKFFG TQVCGETLFGLNENAITKITESLPGFDTIFTYQHRHQNSPVLELPLVENQMGCARAEP RNRTIGQHFRTKPQPMGGTSHNHHGILGVISAQSTLATVATSAQLDTLASRQAATSVT SANSGRTRGVRSYYTEEAAARARAFGIPPEIASLSLRMETNQNNQAGFSAYQKMRREW KDRVYLARSRIAGLGLYAKNDISMGEFIIEYKGEIIRAEVCEVREIRYTAQNRGVYMF RIDEEWVIDATMAGGPARYINHSCDPNCSTQILDAGSSGREKKIIITANRPISSNEEL TYDYQFELEGTTDKIPCLCGAPNCVKWMN" gene complement(<1272747..>1273920) /gene="Cre-aqp-11" /locus_tag="CRE_04867" /db_xref="WormBase:WBGene00072651" mRNA complement(join(<1272747..1272869,1272919..1273022, 1273071..1273215,1273262..1273415,1273464..1273602, 1273746..>1273920)) /gene="Cre-aqp-11" /locus_tag="CRE_04867" /product="CRE-AQP-11 protein" /db_xref="WormBase:WBGene00072651" CDS complement(join(1272747..1272869,1272919..1273022, 1273071..1273215,1273262..1273415,1273464..1273602, 1273746..1273920)) /gene="Cre-aqp-11" /locus_tag="CRE_04867" /note="contains similarity to Interpro domains IPR016697 (Aquaporin, 11/12), IPR000425 (Major intrinsic protein); coded for by the following C. remanei cDNAs: DR776329" /codon_start=1 /product="CRE-AQP-11 protein" /protein_id="EFO86545.1" /db_xref="InterPro:IPR000425" /db_xref="InterPro:IPR016697" /db_xref="WormBase:CRE04867" /db_xref="WormBase:WBGene00072651" /translation="MEVPGPLLDAFIYYITVIAVCEGARHMADRLFDKKGNVHLFIIE FLGTLQVTTTIYENAVIDIHLGRQAFAFTLFSMGIVFALCNRTAFCSPLAPIEQFLFG RLRLSELIQTLVAQFSAGYFAFSFARTIWLRAYSTTDAHSNILGLMESCGFNHPYPIY YHLAFELIGTFIVRHVLTRATSESRDSRIRFVFPALFMAAVFTGTVTFVGDQALDPLV ASTLFYGCRGLSFENFMFVYWIAPTIGWMASAYWDSLGEEDAKKKAAKEKKAEKKRVK KNE" gene <1277696..>1280648 /gene="Cre-flp-15" /locus_tag="CRE_04665" /db_xref="WormBase:WBGene00072650" mRNA join(<1277696..1277906,1280234..1280296,1280512..>1280648) /gene="Cre-flp-15" /locus_tag="CRE_04665" /product="CRE-FLP-15 protein" /db_xref="WormBase:WBGene00072650" CDS join(1277696..1277906,1280234..1280296,1280512..1280648) /gene="Cre-flp-15" /locus_tag="CRE_04665" /codon_start=1 /product="CRE-FLP-15 protein" /protein_id="EFO86551.1" /db_xref="WormBase:CRE04665" /db_xref="WormBase:WBGene00072650" /translation="MLTEKVGGVLNLAARPPSSCSRELPVASLIFGRRRSLFSFHSHH FSHLVMQFSTLFRVVFLAVLAIVALADYDDNSVGTIPIAVDLDYFSNYVKKGGPQGPL RFGKRRGPSGPLRFGKRSSFHAAPAPEDVVSWYQ" gene complement(<1286859..>1287236) /locus_tag="CRE_04868" /db_xref="WormBase:WBGene00076785" mRNA complement(<1286859..>1287236) /locus_tag="CRE_04868" /product="hypothetical protein" /db_xref="WormBase:CRE04868" /db_xref="WormBase:WBGene00076785" CDS complement(1286859..1287236) /locus_tag="CRE_04868" /note="contains similarity to Pfam domain PF00012 Hsp70 protein; contains similarity to Interpro domains IPR001023 (Heat shock protein Hsp70), IPR013126 (Heat shock protein 70)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86813.1" /db_xref="InterPro:IPR001023" /db_xref="InterPro:IPR013126" /db_xref="PFAM:PF00012" /db_xref="WormBase:CRE04868" /db_xref="WormBase:WBGene00076785" /translation="MVNEAKQFEKEDGEQRERVMARNQLEAYAFQVKQAIDEHGSKLE SDDARRVTEAVEETLRWLDSNSLAEKDEIESKDKELKSICQSVLSKMHQSANQQPSGC GNPGSAGFNSSNYPQGPTVEEVD" gene complement(<1287329..>1289731) /locus_tag="CRE_04869" /db_xref="WormBase:WBGene00072649" gap 1287473..1288748 /estimated_length=1276 mRNA complement(join(1288751..1289605,1289651..>1289731)) /locus_tag="CRE_04869" /product="hypothetical protein" /db_xref="WormBase:CRE04869" /db_xref="WormBase:WBGene00072649" CDS complement(join(<1288751..1289605,1289651..1289731)) /locus_tag="CRE_04869" /note="contains similarity to Pfam domain PF00012 Hsp70 protein; contains similarity to Interpro domains IPR001023 (Heat shock protein Hsp70), IPR013126 (Heat shock protein 70)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86668.1" /db_xref="InterPro:IPR001023" /db_xref="InterPro:IPR013126" /db_xref="PFAM:PF00012" /db_xref="WormBase:CRE04869" /db_xref="WormBase:WBGene00072649" /translation="MSSCKAIGIDLGTTYSCVGIYQNGKVSVEIIANSEGNKTTPSYV AFTDTERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGK PVIEVEMKGEKRQFNPEEISAMVLQKMKETAETYVGHAIKDAVITVPAYFNDSQRQAT KDAATIAGLNAIRIINEPTAAALAYGLDKGISEEKNVLIFDLGGGTFDVSILSISEGS IFEVKSTAGDTHLGGEDFDQRMLQHFMNEFKRKTGKDISPNPRAIRRLRTAFERAKRT LSSSSEATIEVDSLFERIDLCSKITRARFEELCADL" gap 1289955..1292796 /estimated_length=2842 gene <1292798..>1293175 /locus_tag="CRE_04666" /db_xref="WormBase:WBGene00055888" mRNA <1292798..>1293175 /locus_tag="CRE_04666" /product="hypothetical protein" /db_xref="WormBase:CRE04666" /db_xref="WormBase:WBGene00055888" CDS 1292798..1293175 /locus_tag="CRE_04666" /note="contains similarity to Pfam domain PF00012 Hsp70 protein; contains similarity to Interpro domains IPR001023 (Heat shock protein Hsp70), IPR013126 (Heat shock protein 70)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86827.1" /db_xref="InterPro:IPR001023" /db_xref="InterPro:IPR013126" /db_xref="PFAM:PF00012" /db_xref="WormBase:CRE04666" /db_xref="WormBase:WBGene00055888" /translation="MVNEAKQFEKEDGEQRERVMARNQLEAYAFQVKQAIDEHGSKLE SDDARRVTEAVEETLRWLDSNSLAEKDEIESKDKELKSICQSVLSKMHQSANQQPSGC GNPGSAGFNSSNYPQGPTVEEVD" gene complement(<1293586..>1296322) /gene="Cre-osm-7" /locus_tag="CRE_04870" /db_xref="WormBase:WBGene00055889" mRNA complement(join(<1293586..1293958,1294017..1294122, 1294166..1294288,1294453..1294619,1294667..1294879, 1294929..1295021,1295079..1295205,1295286..1295374, 1295418..1295557,1295608..1295782,1295828..1296009, 1296053..>1296322)) /gene="Cre-osm-7" /locus_tag="CRE_04870" /product="CRE-OSM-7 protein" /db_xref="WormBase:WBGene00055889" CDS complement(join(1293586..1293958,1294017..1294122, 1294166..1294288,1294453..1294619,1294667..1294879, 1294929..1295021,1295079..1295205,1295286..1295374, 1295418..1295557,1295608..1295782,1295828..1296009, 1296053..1296322)) /gene="Cre-osm-7" /locus_tag="CRE_04870" /note="contains similarity to Interpro domain IPR001936 (Ras GTPase-activating protein)" /codon_start=1 /product="CRE-OSM-7 protein" /protein_id="EFO86771.1" /db_xref="InterPro:IPR001936" /db_xref="WormBase:CRE04870" /db_xref="WormBase:WBGene00055889" /translation="MRFGCLQALSSSALFLLFILPNISSSYEISINHGEVTDSDRRVL LEIARAVKRVKRNPFARDEITSSRSSSDSDLREKEDDNGDNTGDEESEVGHEKTEHFQ GSASDYCDKFEQHFSYFCVGETDQTDKNAYVIKKFCPSYKNACKHKAVSSSVSLTSWP TDPFAKEISVATRPVTVGRTPSHSRRRYSDEESDSDSAEDEEIYYAELRKRYPCKPDC DRRIFAHCTEECKCDYIYPVVQRFCNPPPMPMFLNTCRLWYHGCPKYERYHYSSQFVY SKAEKGKVLPGTPEQSAVNPYGLPQPAPLRRNRALALAPIRRQKRDAVDDSENNEDLV VPPPVPASEIASIRVAKSSPIETEREEVPLTAPQSRAILQNYHESMKSEEKKRRSRRK KLRRRRRHRQRYSFDKDFETISTTQRPPTPRELWRTLKQLNSLTSGPGALGIKSSPAT LKGGNEAQGGLDGLLASVTKPQTERDETARQWAAVATNPKQLTEDIVHAVSTEPNDQT EKQNRGGKKKGEEEPDFNKIKPRTFSSSAATTAIVDEQPEQPDGPKKASSGRAKAHQG NIPILPSDAAFAARGGGDDTFRAFDGLSDSRGLVHTPRSRSPFTKPGLWEPNPADPHS RDAANKYWYHPESVGVDWLNGQLQWGGHWAVPAAGAGGTAGMSAVHFPTIGSFLNIPD DYD" gene complement(<1298284..>1300009) /gene="Cre-twk-40" /locus_tag="CRE_04871" /db_xref="WormBase:WBGene00055890" mRNA complement(join(<1298284..1298374,1298559..1298719, 1298767..1298836,1298884..1299116,1299168..1299258, 1299307..1299506,1299555..1299673,1299793..>1300009)) /gene="Cre-twk-40" /locus_tag="CRE_04871" /product="CRE-TWK-40 protein" /db_xref="WormBase:WBGene00055890" CDS complement(join(1298284..1298374,1298559..1298719, 1298767..1298836,1298884..1299116,1299168..1299258, 1299307..1299506,1299555..1299673,1299793..1300009)) /gene="Cre-twk-40" /locus_tag="CRE_04871" /note="contains similarity to Pfam domain PF07885 Ion channel; contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR013099 (Ion transport 2)" /codon_start=1 /product="CRE-TWK-40 protein" /protein_id="EFO86552.1" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR013099" /db_xref="PFAM:PF07885" /db_xref="WormBase:CRE04871" /db_xref="WormBase:WBGene00055890" /translation="MATWKSYARIILAHVSLIVLSVVYVGFGAFLFYQLEQPNEVEVR ARNIERFNVHKRQMIDHLWEMRSSGIGQHVVEDMAVKYVDNVTRILFEAFDTHCIGAK HLRPGGENEDYNWTYMTALFFTTTLLTTIGYGNLTPVTGRGKFLCILYALFGVPLILI TVADIGKFLSENIVQLYTWYRKLREKCSKQKYSVISNKDDKNKEGDLNLDHLENYISI PIFLIVAILLSYITFGAVVLSMWEGWDFFSGFYFSFITMTTVGFGDIVPLKREYYILD LCYIIIGLSITTMCIDLVGIQYIRKMHYFGRAIKDARFALVNVGGKMVHVPDLMRYAS VLQQKYGQKKTHDTIIVKGAYAPKDLSKIRFIDFGALASMESWQSLWSVLTGRTQEVH V" gene complement(<1304027..>1305669) /locus_tag="CRE_04872" /db_xref="WormBase:WBGene00055891" mRNA complement(join(<1304027..1304122,1304175..1304269, 1304373..1304457,1304506..1304615,1304689..1304789, 1304835..1304938,1304986..1305102,1305142..1305302, 1305591..>1305669)) /locus_tag="CRE_04872" /product="hypothetical protein" /db_xref="WormBase:CRE04872" /db_xref="WormBase:WBGene00055891" CDS complement(join(1304027..1304122,1304175..1304269, 1304373..1304457,1304506..1304615,1304689..1304789, 1304835..1304938,1304986..1305102,1305142..1305302, 1305591..1305669)) /locus_tag="CRE_04872" /note="contains similarity to Pfam domain PF01531 Glycosyl transferase family 11; contains similarity to Interpro domain IPR002516 (Glycosyl transferase, family 11)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86720.1" /db_xref="InterPro:IPR002516" /db_xref="PFAM:PF01531" /db_xref="WormBase:CRE04872" /db_xref="WormBase:WBGene00055891" /translation="MENNKKGFVATVFAKTSILMARSSLTRNNIFELASILGISRILH RTPVIFTHNETYEAMLERVNDTIPGLLDQYLIIKETVPEVARDEDFNLKCCIFENPNV LMEITDKFLHLTGLYYQSYKYFPAMQEELQNYLRRSSNNFSNLPKSTGKTFINCVHIR RGDFFDVGFHVADADFIKKAMNYIERRESRPNQKMVFIMFGDDLQFMKELFTDSIVSN EYTNHSNSIHFISQNSATEELVYSKNHCDTVFISAAHSTFGWWMGYFSKGNRVYFSDI RVTNDSVYKTGDLNPDDYYLPNWIPIEYNKEMMIVESTK" gene complement(<1305977..>1307512) /locus_tag="CRE_04873" /db_xref="WormBase:WBGene00078749" mRNA complement(join(<1305977..1306170,1306279..1306460, 1306784..1306889,1306940..1307019,1307076..>1307512)) /locus_tag="CRE_04873" /product="hypothetical protein" /db_xref="WormBase:CRE04873" /db_xref="WormBase:WBGene00078749" CDS complement(join(1305977..1306170,1306279..1306460, 1306784..1306889,1306940..1307019,1307076..1307512)) /locus_tag="CRE_04873" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86792.1" /db_xref="WormBase:CRE04873" /db_xref="WormBase:WBGene00078749" /translation="MMRSSRGGYHYGRSGGKPSGNDLNGDRSIHQARSPERFGSRSPS PTYHRRGHRASPPLNRPPSWNPYPIEDSPRHNPPGFSHYGTDQRAVPFRYGNRVPSGQ RVQPNLYGNPMMSPSDSRGDSMNYGMPRESRRYNRQMPEPLGRRNREFGDSPMQESSR NSRRKDALLDKLERCEEELASYQAVVRKIKTQRDDILAEIDSLRPRPRFQRPLIEKRE YFLDTQKKVTLLKMFQLFLKQNIKQLRAISVYLTLANIPYMLLNMISCSDGVGQHIPH QKFLLFNTSIMNVYSVFVFAVLAISSVSGIFNPGGKKCGGSNGYGSGGVIIGSSRD" gene complement(<1308759..>1312505) /locus_tag="CRE_04874" /db_xref="WormBase:WBGene00055892" mRNA complement(join(<1308759..1308848,1308900..1308994, 1311206..1311287,1311370..1311491,1311532..1311632, 1311685..1311785,1311827..1311943,1311987..1312302, 1312352..1312415,1312460..>1312505)) /locus_tag="CRE_04874" /product="hypothetical protein" /db_xref="WormBase:CRE04874" /db_xref="WormBase:WBGene00055892" CDS complement(join(1308759..1308848,1308900..1308994, 1311206..1311287,1311370..1311491,1311532..1311632, 1311685..1311785,1311827..1311943,1311987..1312302, 1312352..1312415,1312460..1312505)) /locus_tag="CRE_04874" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86885.1" /db_xref="WormBase:CRE04874" /db_xref="WormBase:WBGene00055892" /translation="MLHGKLVQVIVLLLLVLFLLNDQLEGRYQWGRRFRTNRIISFLT EKTSSDIMHSTPKHPPKGYLSSKLASSARLGWKSKSSKKHERITANHIFELVSIYGIS KTLHRKPAIFIEDSKYHSLVNGVRKVMPGLLNEFQIFDRPVFPEAKNELISQKCCVFD NPSKLENITSKYLHLTGHFYQSWRYFDQHLSEIKSFVKPLLDFSPLPESDENNFITCI HIRRTDFVDGQHHSSNVTFFKPALEFIQSRERERNGRKNMLTVLMGDDPNFEANIYEN TVIADKRTEIKNAAEYFVSKNSPDNDLAFSRYHCDTVLITAPSSTFGWWLGYLSKRQN VYYQDIRSTNDVNYKKGELNPDDFFVPRWTSIKLDENGTIVVV" gap 1310221..1310230 /estimated_length=10 gene <1313596..>1314183 /locus_tag="CRE_04667" /db_xref="WormBase:WBGene00055893" mRNA join(<1313596..1313709,1313756..1313915,1313966..>1314183) /locus_tag="CRE_04667" /product="hypothetical protein" /db_xref="WormBase:CRE04667" /db_xref="WormBase:WBGene00055893" CDS join(1313596..1313709,1313756..1313915,1313966..1314183) /locus_tag="CRE_04667" /note="contains similarity to Pfam domain PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; contains similarity to Interpro domains IPR004038 (Ribosomal protein L7Ae/L30e/S12e/Gadd45), IPR004037 (Ribosomal protein L7Ae), IPR002415 (High mobility group-like nuclear protein); coded for by the following C. remanei cDNAs: DY529572, DY524653" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86815.1" /db_xref="InterPro:IPR002415" /db_xref="InterPro:IPR004037" /db_xref="InterPro:IPR004038" /db_xref="PFAM:PF01248" /db_xref="WormBase:CRE04667" /db_xref="WormBase:WBGene00055893" /translation="MGKRNLDETMNDSAVSETAGDAPALTTEKDEYQALCELVNPIAQ PLASRKLAKKVYKLIKKAAAGEKTLREGIKDVQKELRRNEKGICILAGNVSPIDVYSH IPAICEEKEIPYVYIPSREQLGLAVGHRRPSILIFIKPNGAFQELYDEVAETLNHLTV EAA" gene <1314400..>1315342 /gene="Cre-exos-1" /locus_tag="CRE_04668" /db_xref="WormBase:WBGene00055894" mRNA join(<1314400..1314543,1314588..1314706,1314752..1314854, 1315067..>1315342) /gene="Cre-exos-1" /locus_tag="CRE_04668" /product="CRE-EXOS-1 protein" /db_xref="WormBase:WBGene00055894" CDS join(1314400..1314543,1314588..1314706,1314752..1314854, 1315067..1315342) /gene="Cre-exos-1" /locus_tag="CRE_04668" /note="contains similarity to Brugia malayi 3'-5' exoribonuclease CSL4 homolog, putative.; TR:A8QFK9" /codon_start=1 /product="CRE-EXOS-1 protein" /protein_id="EFO86765.1" /db_xref="WormBase:CRE04668" /db_xref="WormBase:WBGene00055894" /translation="MISGTLVAPGDKVLDGIGDYKMGNGLYEANRRVYASVTGYVNVY GFRDKTDNLVQVIEVRRSENQLDNELLPFNGAVVTAKVMAVGLRFAKCDIISIGDKVY KKRFSALLPKKKLRPLEPELSEPFKNFVRPNDYILAKVCDDAGIKDKFVLSIAEDELG VVLCRGKYGEPMQKVDWNTVVSTRTGRTELRKMAKVPQKCMLPSYSNQTDSAA" gene <1316343..>1318252 /locus_tag="CRE_04669" /db_xref="WormBase:WBGene00078732" mRNA join(<1316343..1316347,1316607..1316704,1317867..1317962, 1318152..>1318252) /locus_tag="CRE_04669" /product="hypothetical protein" /db_xref="WormBase:CRE04669" /db_xref="WormBase:WBGene00078732" CDS join(1316343..1316347,1316607..1316704,1317867..1317962, 1318152..1318252) /locus_tag="CRE_04669" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86626.1" /db_xref="WormBase:CRE04669" /db_xref="WormBase:WBGene00078732" /translation="MSHQATHFGVKKKWKANGSAGGGGGGLSAFSRMKPALDPSADRI WTIGQIIYQRHQDFERNAAIKRQDNGSFDYIDMVSQNSLILDRCVLILGFEKFST" gene <1322043..>1324520 /locus_tag="CRE_04670" /db_xref="WormBase:WBGene00055895" mRNA join(<1322043..1322182,1322298..1322608,1322638..1322765, 1322811..1323320,1323365..1323469,1323520..1323653, 1323714..1323739,1323813..1323842,1323893..1323963, 1324395..>1324520) /locus_tag="CRE_04670" /product="hypothetical protein" /db_xref="WormBase:CRE04670" /db_xref="WormBase:WBGene00055895" CDS join(1322043..1322182,1322298..1322608,1322638..1322765, 1322811..1323320,1323365..1323469,1323520..1323653, 1323714..1323739,1323813..1323842,1323893..1323963, 1324395..1324520) /locus_tag="CRE_04670" /note="contains similarity to Pfam domains PF02214 (K+ channel tetramerisation domain), PF00520 (Ion transport protein); contains similarity to Interpro domains IPR005821 (Ion transport), IPR011333 (BTB/POZ fold), IPR003971 (Potassium channel, voltage dependent, Kv9), IPR003968 (Potassium channel, voltage dependent, Kv), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation), IPR003091 (Voltage-dependent potassium channel)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86533.1" /db_xref="InterPro:IPR003091" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003968" /db_xref="InterPro:IPR003971" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR011333" /db_xref="PFAM:PF00520" /db_xref="PFAM:PF02214" /db_xref="WormBase:CRE04670" /db_xref="WormBase:WBGene00055895" /translation="MNSAIMQGAAMATSHGIARLNRHNAQRQHFHIPTANRLFYQLQT ACTSTEDERQTIQTDDVAEIGVQKPDYQMYCGETEISQQFIKLNVGGQRFMLRKDTIR KRGVGRLMDLVNKSVKDSNADAFFSETSEFYFERPPALFHIVYQFYLNAFYHSGVIHQ PTNLCPVDIIEELEYWRVIPDEYLASCCCAQQMDDDDEEQEEQDKPNLFKTLKFGEIR RTIWNIIEEPASSGKAQVFAVFSVFFVLISISGLVLGSLPELQVPTRQKNNLTGEEYV EMEPMPILGYIEYVCIVWFTVEYSRFQVHKIVCLFWSLGLKMLVSAERKRTFRQLLNI IDLLAILPFIIEMLLLIFGISTEQLRDLKGAFLVIRILRVLRVIRVLKLGRYSSGLQM FGKTLKASFRQLGMMAMVVMTGVIFFSTLVYFLEKDEPGSKFHSIPAACWWCIVTMTT VGYGDLTPITVPGKLVATGAIACGVLVLALPITIIVDNFMKVAETERPGGGNRYRTSQ YKTEPKATKSEQMVLKVA" gene complement(<1324670..>1325326) /locus_tag="CRE_04875" /db_xref="WormBase:WBGene00055896" mRNA complement(join(<1324670..1324822,1324921..1325039, 1325092..>1325326)) /locus_tag="CRE_04875" /product="hypothetical protein" /db_xref="WormBase:CRE04875" /db_xref="WormBase:WBGene00055896" CDS complement(join(1324670..1324822,1324921..1325039, 1325092..1325326)) /locus_tag="CRE_04875" /note="contains similarity to Pfam domain PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region; contains similarity to Interpro domain IPR002125 (CMP/dCMP deaminase, zinc-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86599.1" /db_xref="InterPro:IPR002125" /db_xref="PFAM:PF00383" /db_xref="WormBase:CRE04875" /db_xref="WormBase:WBGene00055896" /translation="MTPSVDDKSLPPHHKELMEEAVAEACRGVECGDGGPFGAVIVDK KGNVVAKGHNMVIVTNDPTMHAEMTAIRNACKALGTFDLSGHTLYTSCYPCPMCMGAS LWARFDAIYYGATAQQAAEIGFDDKAFHDFLKDPKTDDIRKLEHLAADNYLLPFQMWS NKPDKTEY" gene complement(<1326296..>1327783) /locus_tag="CRE_04876" /db_xref="WormBase:WBGene00055897" mRNA complement(join(<1326296..1326454,1326621..1326763, 1326816..1326927,1326974..1327243,1327286..1327414, 1327474..1327549,1327623..>1327783)) /locus_tag="CRE_04876" /product="hypothetical protein" /db_xref="WormBase:CRE04876" /db_xref="WormBase:WBGene00055897" CDS complement(join(1326296..1326454,1326621..1326763, 1326816..1326927,1326974..1327243,1327286..1327414, 1327474..1327549,1327623..1327783)) /locus_tag="CRE_04876" /note="contains similarity to Pfam domains PF00107 (Zinc-binding dehydrogenase), PF08240 (Alcohol dehydrogenase GroES-like domain); contains similarity to Interpro domains IPR013149 (Alcohol dehydrogenase, zinc-binding), IPR013154 (Alcohol dehydrogenase GroES-like), IPR002085 (Alcohol dehydrogenase superfamily, zinc-containing), IPR016040 (NAD(P)-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86721.1" /db_xref="InterPro:IPR002085" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013154" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00107" /db_xref="PFAM:PF08240" /db_xref="WormBase:CRE04876" /db_xref="WormBase:WBGene00055897" /translation="MQKFIQARALIYRKFGDPREVLELETINVSAEPGREECLIEWLA SPINPLDINRIQGNYALKSELPVIGGSEGIGRVVKTGSGSRFKVGDHVTIFSAETPFW TEYSIVNDDELVHLDERIPLDLAATLMINPPTAWIMLQKYVKLEKGDYVIQNSANSGV GRSVIEMCKVFGYQSINIVRSRPNIEQLKTELWRIGADHVFTEEEFKETSKKFLKSIK TRPKLALNGVGGKSALQISAVLERSGTCVTYGGMSKKAHEFTTSALVFNDIQVRGVAV GMWARREENLDEWNHCIDQVQKLAVAGKLTAIPMEKIRMSEHKKAIKKSLEGRSIKQL FIINSSTSTSSNSHL" gene <1329191..>1338507 /gene="Cre-spat-2" /locus_tag="CRE_04671" /db_xref="WormBase:WBGene00055898" mRNA join(<1329191..1329400,1329694..1329774,1330489..1330622, 1330814..1330933,1330984..1331258,1331309..1332033, 1332835..1333137,1334499..1334634,1336475..1336772, 1336845..1336956,1337021..1337563,1337678..1337993, 1338075..1338326,1338473..>1338507) /gene="Cre-spat-2" /locus_tag="CRE_04671" /product="CRE-SPAT-2 protein" /db_xref="WormBase:WBGene00055898" CDS join(1329191..1329400,1329694..1329774,1330489..1330622, 1330814..1330933,1330984..1331258,1331309..1332033, 1332835..1333137,1334499..1334634,1336475..1336772, 1336845..1336956,1337021..1337563,1337678..1337993, 1338075..1338326,1338473..1338507) /gene="Cre-spat-2" /locus_tag="CRE_04671" /note="contains similarity to Trichomonas vaginalis G3 Flocculin, putative.; TR:A2FIF9; coded for by the following C. remanei cDNAs: DT937236, DR409095, DR778827" /codon_start=1 /product="CRE-SPAT-2 protein" /protein_id="EFO86729.1" /db_xref="WormBase:CRE04671" /db_xref="WormBase:WBGene00055898" /translation="MKFRAVRISFLQVFVHYILMFNLSCFFQKTTSKNLGKLMKNGRA ATAHPTTNKEKRNNGTIAEYTAENREARIGEELAQLDTESFERLLQDAATSKTNLLKE DSSEEDPAVVASIMGLIDGGKDRRLNTATEHNDTISTKPPAEEIVTEKPSPAMSNKEP VLVNMKLPICGNPVTDLDKMNGSNNDTIAGTDQDMVSRMEMGENLQHFTQEKNADVLD MEKVDKSQKNIKCDEVSIDQSQENARQVLLQPEQLQYLKLKGLQEFEKFDNVLGPASR GEFASFHQNMSPAISSELGVINPLSTFNFNTFQTCTPNGRLLPAVPRKFFSPIEGVPV VRNRPPPQKGPYTFMLHTVSNILNVNEYSNRNVHSSHSSISPQSVSRSGHIESASQKK RNKLKARRAATAVSVAGGEEMNSSVEDDGKEDILDVEEKENIDDDDGLTEEELEARRN KNRKDRNKKKARKEAKAAEEAKVAEEAKVAEAKAAEAEKLRKKQEAGVSPNSVRGNQI SGRSSVACAFHSPWRSAPNLLKHPMMASLDTSTSSSLHCIQPNNVADSELPGKAPVRI HDDFGDDAPPPAKLSQRHQLARFMNAEQLGISEKINFCNILGLPPWSFFTIGSTSQDE PQKNHQNGGRRSNGAGAGGKNKRNGKSVSSEYTVGINGTAPNTLEEILKDLGINDISE LTENPGKKHKKGNNSNNGSKKNNKQQQNQKKEEQQKEVARSPPSDNESISIDSGADKS KKPLQGGGKKMDEGAVAASITKRCSSGVGQQSEEDDDQSYVSAQENLGGSNSRLSTPP TEFVDARQSRDEVIDNVMLDPNNYRDDEDVESLARQLQQEEDEFITVGKNKKKNKKQS SVQENVSASSTASSSSPPNRRSAQPDTRATSTTNSIPASPASGNNQPQHHQNQRGNNR PVAHPTTLGDFMETTKKETHKNVKHKKISPSTSTVPQKKQPSIEEPTPSSPAFVDALG ALISINTAPAFSYADAAKKTSGENTPTHEMSPVPLSTNTNSATTSNMDQSSSSHPQTS EPSKESKSGEPLPPRASPVSSKKFVATASTAVQLPPSSAVAATFDISFGYEETPEDKQ KRQQKETKVVTPPPQKPQKPTRMNGVDLLKSFTQLDEAGIKKEDNLQEMPKNGSREAN VLDNEMLALWETRWNVYTNTGTKPIVYKPSQKK" gene <1340026..>1344025 /gene="Cre-rsa-2" /locus_tag="CRE_04672" /db_xref="WormBase:WBGene00055899" mRNA join(<1340026..1340144,1340201..1340259,1340308..1340640, 1340881..1341308,1341534..1341718,1341768..1341993, 1342040..1343098,1343179..1343811,1343861..>1344025) /gene="Cre-rsa-2" /locus_tag="CRE_04672" /product="CRE-RSA-2 protein" /db_xref="WormBase:WBGene00055899" CDS join(1340026..1340144,1340201..1340259,1340308..1340640, 1340881..1341308,1341534..1341718,1341768..1341993, 1342040..1343098,1343179..1343811,1343861..1344025) /gene="Cre-rsa-2" /locus_tag="CRE_04672" /note="contains similarity to Staphylococcus saprophyticus subsp saprophyticus Uro-adherence factor A precursor.; SW:Q4A0V8; coded for by the following C. remanei cDNAs: DR776585, DR782658, DR407719" /codon_start=1 /product="CRE-RSA-2 protein" /protein_id="EFO86839.1" /db_xref="WormBase:CRE04672" /db_xref="WormBase:WBGene00055899" /translation="MSKIPISKTGFRSWLSANEGRESKGVLYEQKYQSHHDRIRKKEN MSENERPSSSSYASLINPSPTAEDYERYDADRRIRGKARDIRVAQRSASSSARNSLSM TPEPNETSPTNDQYFTPKRESGGGSQDEEFVTPSTSKKDLRKSRRMSESGSAEVTPVS TKPPRIRKNEKTSDEQAYYTNCLSRKMEENFSKMKDLVFSGHSMQEAREKVLSDTIVD TSKCSRSPRRSSRITSRSDVIVDRSSSQPPPMETLNAVPRFPRAKSPVISCSKETTIL RTSYVDTLVAAHQMHMQYADRTVVTVEQQMTKLESMKNLAALSPAVQEAKRKRNAAEA LRKLVETNEQREKKLEVISDLKDRIGKITNVQFSTHQLVSNRPFAGDPENEKLLKSLD GWVSLPFHEFDVQTARELQSLQKKMLVTINRFKNVASLHRRNPMNRSFGTSRKSIAMK IVPSDFATAGTYSDSHSLNSASHPNTREVSTQVTARLAETAMTQTSPRRVGVEPLDLS SLEKINSSSQTTPPTAPTIVPVTLSTEDFAQQTQQTEEFVVPHSNPPAVSTSTLSMTA ATTLDIDEMLESIDLRNESLETLDSFTHFKSDISYPPMSSTLSADSTPRSERVSLDPE SARRLSAGVSHFLEKIKKENESFEKENEDEEEKRTAEVEEIPVSDSAAVVVPSIDSNV PKVENISEESSETQSPPLNDESEVELNVDEHDITPFEHEMEEQEEQRRLRESALTPTP PRKRTEETVTDEYRRYIDPDDEEDETKKFLNNDEFERSLEEDQFDPRGADDSADDSGF LLNNKPLLPLKSIFDTGTLSPSTSPGLQTDTPRGPDEVNETTIGNLDMEDYCQKEYLV EIGPVMVQKAIEFQSELRGQNWVSSPNIWKPPSLEQIQLDLYDQFDYFDSYSILLWGA IVDLINAKYLKFGRKLNKSEEDMFEKEALEMLQKEYGPESKKKEWSKEVNMSKKLAGM MPLDLDYRFDVRRGLADNEKQKYQWQQIQMTVIADRYPRKKLKDELDVVYNTEKENLG QIVMERELEDVSFSNNRESQPEAGQSDSDQKMIGVSNV" gene <1344315..>1347976 /locus_tag="CRE_04673" /db_xref="WormBase:WBGene00078754" mRNA join(<1344315..1344502,1344550..1344658,1344767..1344912, 1344959..1345148,1345597..1345882,1345930..1346045, 1346091..1346737,1346783..1346922,1347018..1347181, 1347226..1347513,1347560..>1347976) /locus_tag="CRE_04673" /product="hypothetical protein" /db_xref="WormBase:CRE04673" /db_xref="WormBase:WBGene00078754" CDS join(1344315..1344502,1344550..1344658,1344767..1344912, 1344959..1345148,1345597..1345882,1345930..1346045, 1346091..1346737,1346783..1346922,1347018..1347181, 1347226..1347513,1347560..1347976) /locus_tag="CRE_04673" /note="contains similarity to Pfam domain PF00501 AMP-binding enzyme; contains similarity to Interpro domains IPR000873 (AMP-dependent synthetase and ligase), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86859.1" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00501" /db_xref="WormBase:CRE04673" /db_xref="WormBase:WBGene00078754" /translation="MIIQYNANFKIVDASSKQEVRIEEIRDRVAKISRLLMKIEINKS DVLFVKVKRTIDTVLIIIACIQLRITFTFCEDNSKESSHESNQKFRTTLVYDGKQIFR ISENNGNDSTIDDICYVIYTSGTSGNIRKQVAVPVSCIEKNVEYFCSIFHVEPSDSIL FSTSLQFDPSIIELFMAFHVGCQLVLTPDNFRNEPHRLQNAIEEFRPTIAQFTPTVFE MLPSPDSLLSATSSLRILLLGGSNFPLSFINSVRSPDNQTRVFNVYGVTEVSCWATSF EVEVDCPEVLIGTEITGTTLEIDSNDQLVLGGSRQCYVNGRKGKKHETGDRVRRTENG AIKLVGRVDRMIKHRGIRICLDDLSELATRENSSIQSVHFIHFNNRHIVQFISGPDST SSTDTSHTKIMKLDDSNSIIVFVIHVASLPINSSGKVDENELRRISNEHFIKVCRDTS SIIQEFLKRRRGIDLTNVLDQSFVSIGINSLMAAELSISFGEIQEVAMREILNDKITI RSFLNQFVSEKLEELDHEESETIKIKVSIRRQPRMNWAVDLCKCIDGSILVLKLNLII CASHSGIVVAVNPLTGDCLWRTNCGVRFECKPISVKNFIVIGSKKSGLYFLRADSGEL FKTQKYEEDFGIRSQCASDGKLIYCTTENGYFHAIDSETHLSIFRQLIDENGGGTSIG PVISSDGSIFVTTTSGCLTRILVKYDSQKHPVFNISFFKRFGPIFSEIVFLDANSILI SSVHGVLTILNSKTGEEKESISLENENCFCAPLKTGNKLIVATQSGKIITLNISAKLT VSKIFQFDVPGISFVKTPKLIDPWNSLDNSPKLMMISKNGMLLFGRFENLETLEEVSA FPISNKEVFTSPEFFNYYDQKFILIAGRDDYLRSWKFDQF" gene <1348422..>1350367 /locus_tag="CRE_04674" /db_xref="WormBase:WBGene00055900" mRNA join(<1348422..1348531,1348572..1348856,1348904..1349200, 1349242..1349334,1349411..1349572,1349624..1349708, 1349756..1349944,1349986..1350231,1350278..>1350367) /locus_tag="CRE_04674" /product="hypothetical protein" /db_xref="WormBase:CRE04674" /db_xref="WormBase:WBGene00055900" CDS join(1348422..1348531,1348572..1348856,1348904..1349200, 1349242..1349334,1349411..1349572,1349624..1349708, 1349756..1349944,1349986..1350231,1350278..1350367) /locus_tag="CRE_04674" /note="contains similarity to Pfam domain PF07547 RSD-2 N-terminal domain; contains similarity to Interpro domain IPR011508 (RSD-2, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86677.1" /db_xref="InterPro:IPR011508" /db_xref="PFAM:PF07547" /db_xref="WormBase:CRE04674" /db_xref="WormBase:WBGene00055900" /translation="MEKRCLVLDFDSVSGVVRCFNRENHKLIYVKIGNGESTSPGQFI IYNAGESNEQNGILRVLNPRIVDAENGDCVKVGENGKLKISSWIAFSSNENHLTFDRQ FGYADWYGFVDCSAVRTNPSFSAFKTDITVNDSECNVNQIFKVVRIKSKIDPRSNREE YDSLMKKMEEEEEEEQHLEKTHNLDTSSGQLNPERPSRSVDAQSAQNKIPSMHKKKSR SRSRSSKIRANMHASGPPINISAGLSFMNISGPVPPTQSLFETSSSANTSSHSPIPPP LSSLPPAPQFVVHGLVIQKEADNCFIVWLFDTKQIAYLPISTQGYVIVGTCYEFSVIS KNDGSACEITNVGKHLEMKPANSFEIHQTMDKIVVGIHVDLCCPNTRCQLWSFYMGIP FFNSPDVGIVTMADYLDTPIGLHLQWQETLRLYLGDPHAKNMQCICQLVKQKLPQKLH NSFISDDFVSSSRYIWQIVEVCSSEQHHQIREAQLKRENLGSNGGELEEEDEIARQKR NNRPSVRFES" gene complement(<1351017..>1352436) /locus_tag="CRE_04877" /db_xref="WormBase:WBGene00055901" mRNA complement(join(<1351017..1351478,1351588..1351741, 1351787..1351921,1351969..1352047,1352098..1352185, 1352254..>1352436)) /locus_tag="CRE_04877" /product="hypothetical protein" /db_xref="WormBase:CRE04877" /db_xref="WormBase:WBGene00055901" CDS complement(join(1351017..1351478,1351588..1351741, 1351787..1351921,1351969..1352047,1352098..1352185, 1352254..1352436)) /locus_tag="CRE_04877" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86652.1" /db_xref="InterPro:IPR003002" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE04877" /db_xref="WormBase:WBGene00055901" /translation="MEIDDILWLNISAICAVSINFLLIVLILKKSPKSLGSYKYLMIY INLFEFTYAILYFAEKPDLFTKKSAFFLIVNWRESIFPKFVACILDLLFVGFFGISIA ILALHFIYRFLSITNNRHLKSFDSWKIILWFMNPLLNGVTFMITGGIILCADQETNRF MKENYPGLIENTTIIDDLYYMGPFFWPKLANSSSEEYFSWKGAGGSLIVMGLISLSSS IMIYFGVKGYRSMNRLIAQTSCSEKFKSVQKQLFHALVFQTLIPVVLMHIPASAIYIT IFFDKSTEIVGETLSLTIAMYPALNPLPTIFIVKNYRKALKGKEINYIFHLNWESISD VFVSLKNCVLGETRVTQVSAFSTQITTGISTK" gene complement(<1353060..>1353401) /locus_tag="CRE_04878" /db_xref="WormBase:WBGene00078728" mRNA complement(<1353060..>1353401) /locus_tag="CRE_04878" /product="hypothetical protein" /db_xref="WormBase:CRE04878" /db_xref="WormBase:WBGene00078728" CDS complement(1353060..1353401) /locus_tag="CRE_04878" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86577.1" /db_xref="InterPro:IPR003002" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE04878" /db_xref="WormBase:WBGene00078728" /translation="MLYFGLKGYETMKGLMKVTSVSQKYKNLQSQLFNALVFQTIIPV FLMHIPATTIYFSIFINSSTEILGELLNISIAMYPALNPLPTIFIVKSYKQAVTGKYE NLWFVVVEQDE" gene complement(<1353535..>1354287) /locus_tag="CRE_04879" /db_xref="WormBase:WBGene00078753" mRNA complement(join(<1353535..1353790,1353834..1353912, 1353954..1354041,1354084..>1354287)) /locus_tag="CRE_04879" /product="hypothetical protein" /db_xref="WormBase:CRE04879" /db_xref="WormBase:WBGene00078753" CDS complement(join(1353535..1353790,1353834..1353912, 1353954..1354041,1354084..1354287)) /locus_tag="CRE_04879" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86845.1" /db_xref="InterPro:IPR003002" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE04879" /db_xref="WormBase:WBGene00078753" /translation="MRSDAKLINKIKTWTLDISAFFAISINILLIVLIITKSPKSIGA YKHLMIYIAFFELTYAISYVAEKPDIFTKGSAFLIITNTKESVFPVTLSIWLDVVFIG FYGLSIALLVIHFIYRYLAISNSELLDSFRNWKLVLWLLFPIINAGIWIYAAAVIFAS TEDSDRFLKFNKSQIIPYQDILSENFICPRKIMKQGSKIYIMEDRFII" gene complement(<1354563..>1356116) /locus_tag="CRE_04880" /db_xref="WormBase:WBGene00055902" mRNA complement(join(<1354563..1354764,1354815..1355126, 1355170..1355817,1355868..1356002,1356052..>1356116)) /locus_tag="CRE_04880" /product="hypothetical protein" /db_xref="WormBase:CRE04880" /db_xref="WormBase:WBGene00055902" CDS complement(join(1354563..1354764,1354815..1355126, 1355170..1355817,1355868..1356002,1356052..1356116)) /locus_tag="CRE_04880" /note="contains similarity to Nematostella vectensis Predicted protein (Fragment).; TR:A7RSE4; coded for by the following C. remanei cDNAs: DT936831" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86814.1" /db_xref="WormBase:CRE04880" /db_xref="WormBase:WBGene00055902" /translation="MSMDNMMKADEQPFVSPPVYFGNFAYFAKASSDECRKIAPRRRA FENFREKTKIPDSIIDDIIGVLDVSDIYPMVFNREMDGGLERNGLGSQALLLDENSRR RNAQFKSIALRALRYDHIDHSALARKAPHLLLPGDSFPNEDSNESIEDDVPTTEPEPE RGHMDCAIIPTPESVEVINHEKHLIVSVSVYLGYTRELHYHEIRLGRLLKVTDRLELT GEHTLLDLKNAFSCPADFAFSEDFSEKKPTIQDFAKNKWPSSMFFIHDTFYVEPQDQP GWEDPSVTIRNWAQKRNYIGPMNVGSMVDKKLGELFARLGQPYVYIHQGVCEHLIVFN DLFLKFGYCYEFRKLMNYIFRDESHQNVKYPRRLVERNFRRIACDICKEASAQWMIVD HENLLPNSPAYLCSSCYKEFCFDVNGNKVCQFKAVPYCDRKDIGDGGKFISELRFESR QEK" gene <1356469..>1359512 /gene="Cre-puf-7" /locus_tag="CRE_04675" /db_xref="WormBase:WBGene00055903" mRNA join(<1356469..1357218,1357319..1357968,1358039..1358247, 1359277..>1359512) /gene="Cre-puf-7" /locus_tag="CRE_04675" /product="CRE-PUF-7 protein" /db_xref="WormBase:WBGene00055903" CDS join(1356469..1357218,1357319..1357968,1358039..1358247, 1359277..1359512) /gene="Cre-puf-7" /locus_tag="CRE_04675" /note="contains similarity to Pfam domain PF00806 Pumilio-family RNA binding repeat; contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR001313 (Pumilio RNA-binding region); coded for by the following C. remanei cDNAs: DY526601, DY525174" /codon_start=1 /product="CRE-PUF-7 protein" /protein_id="EFO86782.1" /db_xref="InterPro:IPR001313" /db_xref="InterPro:IPR011989" /db_xref="PFAM:PF00806" /db_xref="WormBase:CRE04675" /db_xref="WormBase:WBGene00055903" /translation="MSQPWIRRSAATSSGSSSIGGTGYNLFGNGSLDGVNSFHADFPL VNSNFYNNVFVPQPVNSSLKEFPLKDLQSTKPPVKLLPHANRRSTLNNLIPDCDNFFF NGTAVESSLTSLVDNSSLKDSFQPSSVSHVVDNSSDSLHQEITLQDVIANGQLFDFAL DRYGVKFLEIHYPQEAKDDLHKLVFGKLTESITLFNGLCHNSNGNFIVQKLVEYASIE EQKVLLMKMIEGGLLEMCKDKFACRVIQLSIQKFDRPNVTQLVHAISNFDFVAMCTDQ TSIHVVQRIVKHLPVDLWRFFVDFLYTGDNLMSVCRDKYGCRLVQQVIDKLSENPKSP CFNWRIQLLHTLMSCVVRNCFRLSSNEFANYVVQYVTKSSGVMEMYRDMIIEKCLLRN LLSMSQDKYASHVIEGAFIFAPQSLLAEMMNEIFDGYVKDQSHRDALDILLFHQYGNY VVQQMITICTSALMGKEERQLTPSDLGMYAAWYEKIRSRVQHHSARLERFSSGKKIID SLMKLPPVESPASTKYSSSFLDFSSQLDIFSEVDFSRKDISKNFDFLRSNPFADSILR EEYLKQRYLDLSEINYVGPLFHYPTGNETYRLNWDAVVPIAFMTILIV" gene <1363780..>1365040 /locus_tag="CRE_04676" /db_xref="WormBase:WBGene00055904" mRNA join(<1363780..1363814,1363874..1363973,1364130..1364210, 1364261..1364643,1364830..>1365040) /locus_tag="CRE_04676" /product="hypothetical protein" /db_xref="WormBase:CRE04676" /db_xref="WormBase:WBGene00055904" CDS join(1363780..1363814,1363874..1363973,1364130..1364210, 1364261..1364643,1364830..1365040) /locus_tag="CRE_04676" /note="contains similarity to Homo sapiens Similar to Suppressor protein SRP40; VG:OTTHUMP00000170311; coded for by the following C. remanei cDNAs: DR782487, DR777109, DR409379, DR778026, DT935069" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86872.1" /db_xref="WormBase:CRE04676" /db_xref="WormBase:WBGene00055904" /translation="MDVPAAPRPHSNTQRPTQAYYVPRKLLECGRGPQSKPTNTEKNE KPIQTSVQKQKPRPLMDNVITTPTSSIKEKSTQSNRQKSNAPATKKSSSNSSNSPRKS PPAMTAYQPPLQYPSLPRDLHLVSSTPSSRSSSSMSSSGIGPQISPTLTVSSPRVLHV KGGPQKYSLPRPNAFAPMIAQSDEKECICDRKKTHVVCKRCGYECVGRVQVTCGQHPM ILALNDLRECPNPVCHSVQLLEFDEFGNEDVHDDTIEQLLAEPIEKIDLQS" gene complement(<1365415..>1368319) /gene="Cre-hmt-1" /locus_tag="CRE_04881" /db_xref="WormBase:WBGene00055906" mRNA complement(join(<1365415..1365535,1365583..1366139, 1366190..1366397,1366442..1366865,1366909..1367030, 1367080..1367513,1367560..1367862,1367873..1368030, 1368109..1368202,1368248..>1368319)) /gene="Cre-hmt-1" /locus_tag="CRE_04881" /product="CRE-HMT-1 protein" /db_xref="WormBase:WBGene00055906" CDS complement(join(1365415..1365535,1365583..1366139, 1366190..1366397,1366442..1366865,1366909..1367030, 1367080..1367513,1367560..1367862,1367873..1368030, 1368109..1368202,1368248..1368319)) /gene="Cre-hmt-1" /locus_tag="CRE_04881" /note="contains similarity to Pfam domains PF00664 (ABC transporter transmembrane region), PF00005 (ABC transporter); contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR011527 (ABC transporter, transmembrane region, type 1), IPR001140 (ABC transporter, transmembrane region), IPR003593 (AAA+ ATPase, core)" /codon_start=1 /product="CRE-HMT-1 protein" /protein_id="EFO86593.1" /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="PFAM:PF00005" /db_xref="PFAM:PF00664" /db_xref="WormBase:CRE04881" /db_xref="WormBase:WBGene00055906" /translation="MGFSPFLDECRAEGFWPIGPSCNKILSFGIYSFFIVVNFIVLCI PNTGNNYMQMIDDEGRTTSKLTMPKILSICSLFAIICQSIFYFCFMFYFHPYSHILLA FCISKLYTKKVLLIFRFFQFFWIFSLCSFSKWRNQSSTPISLAFAFSSALLIDCIPLT DWKKYFDGTTKNRGDLTFYIIELTLVSMVFFFTIMNGLFNCSGFSSRESAWNNLSKKV VRVAPYIWPTKSITLQLRVVFCLFMLIMGRLINVSLPILSKWIVDELSTPENFHYSLL FLATFLKFLQGNGAMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSLSLRWHLSRK TGQVLRVMDRGTSSVNNILNYILFNVVPTIADIIIAVIFFFSAFNVYFGLIVFATMVL YLAVTISITEWRTQYIREANEKDNATSAIATDSLINYETVKYYGNEEFEVNRFKKAIE RCVFHLSYFRPISSSYQVTEWKTQASLAFLNCLQNAIIGIGMIVGSVFVVYMIVHEKT LTVGDYVLFTTYLLQLYTPLNFFGTIYRVIQKAFVDMENMFDLMNDEVEVKDLPHALP YNDPHGTISVKNLSFEYNTGLPVIKNISFEIGNGQTVALVGSSGSGKSTLIRLLFRLF ESTEGSIEFDGTDVRNYTMHSLRQQIGIVPQDTVLFNDTIMYNIRFGRPDASDEEVIE AAKAAMIHDKITSLPEGYSTMVGERGLKLSGGEKQRVAIARTILKKPQFIFLDEATSA LDTPTERAIQKCLEKLCKSRTGVVVAHRLSTVVNADLILVLDKGIILERGNHKELLSQ KGVYASMWEAQIAEQRAKSIELGEDVPSDSSS" gene complement(<1369165..>1370536) /locus_tag="CRE_04882" /db_xref="WormBase:WBGene00055907" mRNA complement(join(<1369165..1369376,1369422..1369542, 1369590..1369697,1369745..1369913,1369959..1370212, 1370256..1370374,1370431..>1370536)) /locus_tag="CRE_04882" /product="hypothetical protein" /db_xref="WormBase:CRE04882" /db_xref="WormBase:WBGene00055907" CDS complement(join(1369165..1369376,1369422..1369542, 1369590..1369697,1369745..1369913,1369959..1370212, 1370256..1370374,1370431..1370536)) /locus_tag="CRE_04882" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8NTE6" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86625.1" /db_xref="WormBase:CRE04882" /db_xref="WormBase:WBGene00055907" /translation="MVTKKKARKNEDFKKVKLKVGKKLKKTTTTDTTIKAKRVVLASQ LEEKVETDVNPLSFRGLTLEELCKQMGHFNSKVKMNAIQGLKQILTSRPDLVNIHLRL LVPCVAVHVSDATFEPQTRQNLLNLYKILCTASTSAMSAHITLFLAHVLRALTNIVTE VRHLALNTLSILLDRYPSLCCNHADLFPCFINYLGSSKRLAWNKPGLIDTTLNFINVY DMNRERKVIITNVEVNYETGTVEGTINLKQLFTQNPDSSPFDFGVTSTSKSHTVSPFE LPDALLNLSAVLAPIISNIVLEDTGGQFLTQGVKMIESIVRGAENQPNDFLLKDFRVS LKFLPPRFAKIGHIHDFVFSKSVSSLLI" gap 1371586..1371595 /estimated_length=10 gene <1374313..>1379393 /locus_tag="CRE_04677" /db_xref="WormBase:WBGene00055908" mRNA join(<1374313..1374456,1374513..1374606,1374651..1375157, 1375206..1375861,1375910..1376048,1376092..1376373, 1376422..1376869,1376913..1377944,1377989..1378332, 1378383..1378567,1378609..1378698,1378805..1378953, 1378994..>1379393) /locus_tag="CRE_04677" /product="hypothetical protein" /db_xref="WormBase:CRE04677" /db_xref="WormBase:WBGene00055908" CDS join(1374313..1374456,1374513..1374606,1374651..1375157, 1375206..1375861,1375910..1376048,1376092..1376373, 1376422..1376869,1376913..1377944,1377989..1378332, 1378383..1378567,1378609..1378698,1378805..1378953, 1378994..1379393) /locus_tag="CRE_04677" /note="contains similarity to Pfam domains PF00136 (DNA polymerase family B), PF08996 (DNA Polymerase alpha zinc finger), PF03104 (DNA polymerase family B, exonuclease domain); contains similarity to Interpro domains IPR006172 (DNA-directed DNA polymerase, family B), IPR004578 (DNA-directed DNA polymerase, family B, pol2), IPR006133 (DNA-directed DNA polymerase, family B, exonuclease), IPR006134 (DNA-directed DNA polymerase, family B, conserved region), IPR015088 (Zinc finger, DNA-directed DNA polymerase, family B, alpha); coded for by the following C. remanei cDNAs: DR408671" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86903.1" /db_xref="InterPro:IPR004578" /db_xref="InterPro:IPR006133" /db_xref="InterPro:IPR006134" /db_xref="InterPro:IPR006172" /db_xref="InterPro:IPR015088" /db_xref="PFAM:PF00136" /db_xref="PFAM:PF03104" /db_xref="PFAM:PF08996" /db_xref="WormBase:CRE04677" /db_xref="WormBase:WBGene00055908" /translation="MSDSENNAEGDVRRSSRRCGVSAKKTKELSAMEQLKQARASGRA YKPDIEVEDVYDTVDDDEYEQIVSKRQNDNFVVDDDGMGYVDTGVDFEDDEYGDDYED DVPRESSFKRGDKKTKKEKKDKKKGAMHAFLSSTMSKKAVIDESKVKANLEDDEELKN ILEQLDKVDSDAEVEEQPIKVSKNPFKRGRSVDSPTSDAIAPRPIVKKSKTSNVTGLA PHRFQNSKNQVMAKIIPEPKSDEDNDDDDYGVPDFDDLPPVSPIKTEIKTPLISPQKE KNLKVPQEVLKMEVDNDEVETTGRIKEVEDSLAKFRVMEDVWTENSEEESKEANVAEV ETGSEPFYVMSGESEDTKAIRMYWIDAYEDVHKANGTVYLFGRVKASATSWESCSIVV KNICRKVYFMPRSHNLRTGEESNLAELHKEIGDVLKNKFNTHEFKCKMVEKELIRDES FGNGGGTKTPLMEVLYPADKGKLPSDLRGNTFSHTFNTSVTPLERLLIEKKFMGPGWI ELYNYAKPKAPTTNCKHEFEVDMEKMRNIRYLEDDDLEKMKVSANSNLAIPSIKLFAL NIVTTLNEKKENEICMISVLINPKCDLSHPSGDPKNFQRKCLITKPSGGSLPYDIQKR LEAGHISNCVQTIANEKALLTRFLALINEQEPDMVVGHDLSATIALLVSRLEKLKLPN WSRISRLKRSINIGKLGHSKSGQWELTAGRLMLDSKLAAMELVKSRSFDLTELSQQIL QTTRREIYSSEIPHLYSESKDLISLINWSWHDLLLSIRLVNHLNALPLYLQISQIVGG ITSRTMMGGRAERNEYLLLHAFEKADLIAPDKYNSFDAKKKKEQESEDNAEVTEEKKS GKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTLEYAKDSDEQLSVP QNTDIEGVLPREIRKLVECRRNVKGLMKTERNEAKRKQLDIRQMALKLTANSMYGCLG FQYSRFYAKPLAALVTAKGREILMHSKDLVEKMGYSVVYGDTDSIMINTNSVDLGAAK KLGSEIKKAVNKCHRLLELDLDGVFKRMLLLKKKKYAALTINPDTRVEAKELKGLDIV RRDWSQLAKETGTAVVDKILDTSLTRDEMISSIDDLLKEIRQKLDSGTIPLEMFQISK QLTRNPEQYSDVKAQSHAAVAQRLNKSGKFHFRHNDIVEYVICDDGSDNSATQRAYHR TEMTDNKDLKIDLLYYLAQQIHPVVSRLVEPIEETDAVRIAESLGLDSANYKRAAAAQ ASQRAAEEDCTWQQESYELCEGVIVICPYAECGETNVIRETFDSTTDPTCPRLLLSGC SKCDKSWESSEHQAVIFNQIDRQLGEFVSRHHAAAFRCDEPTCEFKTRVQTMKWCREG LECVRCSTGVLRREYTSKQLFDQQMFFRQIFDVETAIRKLSDSQKSKIFELIMGFYIF SFPGASENSDRQRFTACRIDSMEIVNRITKKYLERNSYNRVDLSYIFAPMLKI" gene <1380168..>1385623 /locus_tag="CRE_04678" /db_xref="WormBase:WBGene00055909" mRNA join(<1380168..1380273,1380325..1380443,1380490..1380597, 1380646..1380769,1380814..1381046,1381185..1381428, 1381761..1381909,1381960..1382003,1382069..1382177, 1382222..1382401,1382452..1382495,1382564..1382672, 1382732..1382899,1382945..1383109,1383204..1383455, 1383640..1384111,1384161..1384226,1384275..1385047, 1385094..1385378,1385492..>1385623) /locus_tag="CRE_04678" /product="hypothetical protein" /db_xref="WormBase:CRE04678" /db_xref="WormBase:WBGene00055909" CDS join(1380168..1380273,1380325..1380443,1380490..1380597, 1380646..1380769,1380814..1381046,1381185..1381428, 1381761..1381909,1381960..1382003,1382069..1382177, 1382222..1382401,1382452..1382495,1382564..1382672, 1382732..1382899,1382945..1383109,1383204..1383455, 1383640..1384111,1384161..1384226,1384275..1385047, 1385094..1385378,1385492..1385623) /locus_tag="CRE_04678" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR007087 (Zinc finger, C2H2-type); coded for by the following C. remanei cDNAs: DT934216, DY528271, DR406533" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86641.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE04678" /db_xref="WormBase:WBGene00055909" /translation="MITKKKTRKNEDFKKVKPKVEKNLKKTTTTDTAIKANGVVLASP LEERVETVENPLSFGGVTLEELCKQASNFLKAYDMNKERKVNGTNVEVNFETKKVEGN VNLKQVFTQNPSSSPFDFGVTSSSKSHTVSPLPELPDALLHLSAVLAPIILKILLEHN SCQLLNQDVKMSEPRVRGPENQQGFLLVNDLGITVQRVKELIPVSHQNNNIILPAKLN TNNAGMMVSTTKGRNVEPLTDCMTAMDVDDHIFKSGKSCGWILNYNFLADGSGSPLKE KSLSLGSATANFIRSSVAPSHQTAQNPLELHPPSPALTTGLPKHREVPTSSSNPSPVV PAVENKTARNGTTVATALGQNVHLSVNGKRVGRPPGTFKRAPNHIASSNNNGDDVDVE TANDLTCRWKDCMMRFSTLKGLADHVRVMHVRSTSEDQAIAASSSNPVSLVPVVKFTN QTAPNGNTIPTAVGQNVLLSVRGKRLGRPRGTFKKAPNHITSSNNNGDNVDEETKNDL TCRWKDCMMKLSTLKGLFDHVQEKHVQSTEQKHHAWRCEWEGCDRNETFKDFYQLVVH VRCHTGEKPNKCEYPGCGKEYSRPENLKTHRRTHTGEKPYKCEFVGCKKAFNNGSDRA KHHNRTHSNLKPYACQIVDCKKSYTDPSSLRKHIKMVHGNGEYEKAKKSCPPNHSKRR RPNPRMAPPTGSLSHPYLSTPHPMPSNAVPVHQNNFSNGALKNPTTAVKVSKSHQSHT IQQSHINTVVAAQIQTPIREPIRVDTVAPPTGVHPSNQSARQNFPSIPQQIHLHNANV ATAEEEDEMSEDDEESLQPAQAIPASRPRDGSDDGNSGSGAGSSRSSASSGSGTLEMA GRATQSESRSSGSGERGKRSFLIADLLQLASEFGNDRIISDALNLSIFETRDINTVWH IYSLFDNACSRMDHFETGKRLPTWQEVRVLHSYYHSPHYNRNLFHDSPAARTRETLFW RAINSANSRREHQIQSISLNSEVDEGFEEYALRAARDGRRATSNNQSAAVRVGAQESE DEDDGFGDSDDDLPGLGLGGLDVIVRRRRRIVRRQALKQAYMEIDESNTDNQFGVVGG GFGGENNENGDDRSYDSFVHTPRIDDSDINFIKLFKRAESDLAEKAAKLPKITEMVPI DQVQASQQIPPEPINPPAACRSSSTPFSVHRLLVEEPEFRQSLLRFVTIHVDNDEIKN NVSSDEFYKLPSDERRMIEEAMSAMDGMESAEAAQNQAVIEEPQESLFAEDQESSSNV PSDYSMPSNPRRRSCDSEHSEVVPEKKQRKH" gene complement(<1388249..>1402489) /gene="Cre-tra-1" /locus_tag="CRE_04883" /db_xref="WormBase:WBGene00055910" mRNA complement(join(<1388249..1388380,1388494..1388778, 1388825..1388918,1389396..1389738,1389787..1389852, 1389902..1390721,1391015..1391062,1391199..1391450, 1391656..1391820,1391865..1392032,1392078..1392186, 1392252..1392295,1392346..1392584,1399152..1399283, 1399318..1399396,1400222..1400323,1400524..1400723, 1402408..>1402489)) /gene="Cre-tra-1" /locus_tag="CRE_04883" /product="CRE-TRA-1 protein" /db_xref="WormBase:WBGene00055910" CDS complement(join(1388249..1388380,1388494..1388778, 1388825..1388918,1389396..1389738,1389787..1389852, 1389902..1390721,1391015..1391062,1391199..1391450, 1391656..1391820,1391865..1392032,1392078..1392186, 1392252..1392295,1392346..1392584,1399152..1399283, 1399318..1399396,1400222..1400323,1400524..1400723, 1402408..1402489)) /gene="Cre-tra-1" /locus_tag="CRE_04883" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR007087 (Zinc finger, C2H2-type); coded for by the following C. remanei cDNAs: DY528384, DT933648" /codon_start=1 /product="CRE-TRA-1 protein" /protein_id="EFO86787.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE04883" /db_xref="WormBase:WBGene00055910" /translation="MRRRDQYINLSLSFPFFYVLNSNHYVEENVPTSSSRYLLNSQNR SEQFEQQHQSSINLTQGVERLISVSHQNNNINFPVKLNTDNGGMMAPSTEDPETVVDA QRRGSFSKKKNGNGWSKAGLGTENDLAKNMEPLTDCKTAMDVDDQGSKSGKSYGSGSP LKEKSPSLGSATANFIRSSVAPSHQTAQNPLELRPPSPVNQSAATVTQLVGTAQAIQS SQPVVESSAPATAPSEDQAIAASSSNPVSVVPVVKFTNQTAPNGSTVATSVGQNVRLT VNGKRVGRPPGTFKRAPNHIASSNNNGDDVDVETANDLTCRWKDCMMKFSTLKGLVDH VQEKHVQSTEQEHHAWRCEWEGCDRNETFKALYMLIVHVRRHTGEKPNKCEYPGCGKE YSRLENLKTHRRTHTGEKPYKCEFADCEKAFSNASDRAKHQNRTHSNLKPYACQIIGC QKSYTDPSSLRKHIKAVHGDEEYEKAKKSRPPNYSNRRRPDPRMAPPTGSLSHPYLST PHPMPSNAVPVHQNNFINLALAQHHHRAQLMASNGALMDPTTAVQVSQAHQAHMMQSH MMQQAHVNAVAAAQIQAQHQAMQVQAMQQAQVMQHAQAMVLQNNILSAQGLLNPFTPI SPLLQPRPTSMMALIHHQQQQQQQQGQQLTPPTPTMMQLTPHTPITPITPITPIGSNG PMFTMPNLVVQPPIREPIRVDTVAPPTGVHPTNQSARPNFPSIPQQIHLHYANVATAE EEDEMSEDDEESLQPAQAIPASRPRDGSDDGNSGSGAGSSRSSASSGSGTLEMAGRAT QSESRSSESGERGMRSFLIADILQLASEFGNDRIISDALNLSIFETRDINTVWHIYSL FDNACSRMDHFETGKRLPTWQEVRVLHSYYHSPHYNRNLFHDSPAARTRETLFWRAIN SANSRREHQIQSISLNSEVDEGFEEYALRAAXXXXREPSLILLRKPAKLPKITEMVPI DQVQASQQIPPEPINPPAACRSSSTPFSVHRLLVEEPEFRQSLLRFVTIHVDNDEIKN NVSSDEFYKLPSDERRMIEEAMSAMDGMESAEAAQNQAVIEEPQESLFAEDQESSSNV PSDYSMPSNPRRRSCDSEHSEVVPEKKQRKH" gap 1389400..1389409 /estimated_length=10 gene <1416264..>1420423 /gene="Cre-wht-8" /locus_tag="CRE_04679" /db_xref="WormBase:WBGene00055912" mRNA join(<1416264..1416439,1416486..1416663,1416744..1417400, 1418271..1418519,1418564..1418974,1419019..1419141, 1419205..1419392,1419439..1419550,1419602..1419928, 1419979..1420109,1420156..>1420423) /gene="Cre-wht-8" /locus_tag="CRE_04679" /product="CRE-WHT-8 protein" /db_xref="WormBase:WBGene00055912" CDS join(1416264..1416439,1416486..1416663,1416744..1417400, 1418271..1418519,1418564..1418974,1419019..1419141, 1419205..1419392,1419439..1419550,1419602..1419928, 1419979..1420109,1420156..1420423) /gene="Cre-wht-8" /locus_tag="CRE_04679" /note="contains similarity to Pfam domains PF00907 (T-box), PF01061 (ABC-2 type transporter), PF00005 (ABC transporter); contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR001699 (Transcription factor, T-box), IPR003593 (AAA+ ATPase, core), IPR013525 (ABC-2 type transporter)" /codon_start=1 /product="CRE-WHT-8 protein" /protein_id="EFO86773.1" /db_xref="InterPro:IPR001699" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013525" /db_xref="PFAM:PF00005" /db_xref="PFAM:PF00907" /db_xref="PFAM:PF01061" /db_xref="WormBase:CRE04679" /db_xref="WormBase:WBGene00055912" /translation="MQVYLIDEEKYEEFEPINEMIVNRSGAKLDPEPKFMISGLVADE EYIMKLRIELADEFRYKYRKNSWIPVAGSTKNASISRRTQAETSKEYGATWHKRVVQF EKIRITREFNEKRQNMAYVEPGHKYIPILTIFNVSTGISIDYRFDLLVFIAVKSYQSI PVRHAKRRNQLNCPLISLNSFEENEKPVNLLSLELSPKESQQMTSFYPTYSNRFPNGI GETSVPYPHNSYPFDYFLLYPQVQYPLNQQLLYSIPTSSIHYSHIEDQIVHRSIQDNK IVVEELIEDIYIPEFGWNSVLIPGCKREQIKENVYNILGFHHEIWSPQEMELENLYFQ TEQVTTKAGRVLLNGVSGCAVPGEVIALMGASGAGKTTLLNTLLQRNLKGLDVEGEIL VNGQNIGKGVTSVSAYVQQEDLFMGTLTVKEHLEIQAKLRLPPGTSKSERAKRVEEVM NEMLLEKPKNSRIGIPGIKKGISGGEMKRLAFATEMINNPPIIFCDEPTTGLDSHMSL QVVKVCVFPTRRSVIHDFQTLEAMALEKGKTIICTIHQPSSEVFEIFDKVVFLAQGRI AFHGAIDEAIHHFSACGYQVPDHTNPADYFIDTLAIKPSEAETCKQRCQELCDKFEKS VYHERLLKLMDQTKDVRAMTPHHSASYFVLLMALFNRYMLDNIRNPAIMKAKMIQKLF MGLFIGLLFYGLEVDQDGLTGYKGALFYYISELTYSTIFGIQAFMPADYPPLVREYDD RIYPISAYYIAKILSFLPIFTVDGIVLVLSSYFFVGFPINVVTFLRQMITCMIIEWNV AALGIAVCATAPSYAIAVTVTGPLLTVFSLTGGLFTNVSEMHVWISWVQYLSWFRYGY ESLVVNQFEHEKFDNITCQALDRHGQKQLIPDSLCEESGRTVVNNFSFESANLYTNWI AMIYLTIVIYIIGYVGLVRRVIANR" gene complement(<1420965..>1421533) /locus_tag="CRE_04885" /db_xref="WormBase:WBGene00078750" mRNA complement(join(<1420965..1421186,1421240..1421441, 1421484..>1421533)) /locus_tag="CRE_04885" /product="hypothetical protein" /db_xref="WormBase:CRE04885" /db_xref="WormBase:WBGene00078750" CDS complement(join(1420965..1421186,1421240..1421441, 1421484..1421533)) /locus_tag="CRE_04885" /note="coded for by the following C. remanei cDNAs: DR775572, DT936723, DR406732" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86795.1" /db_xref="WormBase:CRE04885" /db_xref="WormBase:WBGene00078750" /translation="MKKKLLPQLDNIGKVMRTLSAILFVAVSLSSAQLMPSAKHNQFI ELNLNRYNNDDHIIRSDISVPDVVVNRHHISSEDIVEKLKEHVKEAAEHFLTLDDTEK LHASIDLPQAIHSSQWTNNNGKRSVNEGVDYEATAELYKQALSFLDKYDVEMRLN" gene 1423299..1423370 /locus_tag="CRE_31942" /db_xref="WormBase:WBGene00186350" tRNA 1423299..1423370 /locus_tag="CRE_31942" /product="tRNA-Thr" /db_xref="WormBase:CRE31942" /db_xref="WormBase:WBGene00186350" gene <1424253..>1425436 /locus_tag="CRE_04680" /db_xref="WormBase:WBGene00055913" mRNA join(<1424253..1424458,1424672..1424966,1425014..>1425436) /locus_tag="CRE_04680" /product="hypothetical protein" /db_xref="WormBase:CRE04680" /db_xref="WormBase:WBGene00055913" CDS join(1424253..1424458,1424672..1424966,1425014..1425436) /locus_tag="CRE_04680" /note="contains similarity to Pfam domain PF00907 T-box; contains similarity to Interpro domain IPR001699 (Transcription factor, T-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86558.1" /db_xref="InterPro:IPR001699" /db_xref="PFAM:PF00907" /db_xref="WormBase:CRE04680" /db_xref="WormBase:WBGene00055913" /translation="MDSLESPSGIRISLSDKKTWNEFYPKTEMIVTKKKGRVIFPHLN YNLKGMEPGTLYTVHIHLERVDNIKYKFDAGEWQEFGKGEPVHPIKYKEHPDGARPGS HWMKETVSFSHLKITNDAENKDNKLILVQSMHKYRPVVTITKHGGYPGEEFRLALTEF IVVTAYQSDEMIKLKVAHNKFASGFRSNGKRRNSIDSENTSPGDVKRRSTSSESSSSS PLLVSPPNFDSIMNPMNPLTPIEFNQNPYPTQPIYPMQNQVFDFNSAYWNSYYQQQQA YWNHNQMNMMNQWSTGNPMNSENAHNGFGGI" gene <1426082..>1426671 /locus_tag="CRE_04681" /db_xref="WormBase:WBGene00055914" mRNA join(<1426082..1426243,1426293..1426581,1426631..>1426671) /locus_tag="CRE_04681" /product="hypothetical protein" /db_xref="WormBase:CRE04681" /db_xref="WormBase:WBGene00055914" CDS join(1426082..1426243,1426293..1426581,1426631..1426671) /locus_tag="CRE_04681" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86646.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CRE04681" /db_xref="WormBase:WBGene00055914" /translation="MADKKSINVSAIGTSAGASIAPPQSHSNFIDAGTTSLLNKAGEP AFKLSLNTSKIEFKCTDDRKPASVFVKMHNPTSETVSFKVRCTSAEIFRVQPPLGFVK PNETVSIVIWYQNQDKRDEMFKSHYFAFYHTRSDGRTARELWTNSKAEGVRRIPASFI SAK" gene <1428559..>1430460 /gene="Cre-dpy-18" /locus_tag="CRE_04682" /db_xref="WormBase:WBGene00055915" mRNA join(<1428559..1428822,1428887..1429237,1429285..1429369, 1429434..1430080,1430128..>1430460) /gene="Cre-dpy-18" /locus_tag="CRE_04682" /product="CRE-DPY-18 protein" /db_xref="WormBase:WBGene00055915" CDS join(1428559..1428822,1428887..1429237,1429285..1429369, 1429434..1430080,1430128..1430460) /gene="Cre-dpy-18" /locus_tag="CRE_04682" /note="contains similarity to Pfam domains PF07719 (Tetratricopeptide repeat), PF08336 (Prolyl 4-Hydroxylase alpha-subunit, N-terminal region), PF03171 (2OG-Fe(II) oxygenase superfamily); contains similarity to Interpro domains IPR006620 (Prolyl 4-hydroxylase, alpha subunit), IPR011990 (Tetratricopeptide-like helical), IPR013547 (Prolyl 4-hydroxylase alpha-subunit, N-terminal), IPR013105 (Tetratricopeptide TPR2), IPR005123 (2OG-Fe(II) oxygenase), IPR013026 (Tetratricopeptide region); coded for by the following C. remanei cDNAs: DR778023" /codon_start=1 /product="CRE-DPY-18 protein" /protein_id="EFO86623.1" /db_xref="InterPro:IPR005123" /db_xref="InterPro:IPR006620" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR013105" /db_xref="InterPro:IPR013547" /db_xref="PFAM:PF03171" /db_xref="PFAM:PF07719" /db_xref="PFAM:PF08336" /db_xref="WormBase:CRE04682" /db_xref="WormBase:WBGene00055915" /translation="MRLALLVLTLFGYTHADLFTSIADMQNLLETERNIPKLLDKYIH EEEERLVQLKKLSEEYAKKNEQSIENGMKDIVNPINAFLLIKRKIFDWKEIESKMNAN KAGNVVNSITDDNYGVRYPTADDLSGAAIGLLRLQDTYRLDTKDLADGKIYQDQGNYT FSAKDCFEIARAAYNEHDFYHTVMWMEEAKRRLADEEEPSVEVEDILEYLAFALYKQN NLKHALKLTEELYKLNPSHPRAKGNVKWYEDLLEQEGVRRSEMRKNLPEIQNRRPDSV LGNTERTMYEALCRNEVPVSQKDISRLYCYYKRDRPFLVYAPIKVEIKRFNPLAVLFK DVISDDEVATIQELAKPKLARATVHDSATGKLVTATYRISKSAWLKEWEHEVVERVNK RIELMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYM SQPSHGGGTVFTEVKSTVLPTKNDALFWYNLFKQGDGNPDTRHAACPVLVGIKWVSNK WIHEKGNEFRRPCGLKSSDKERFVGDLGVGPEPRDAPNLSPVLAKDVWETL" gene complement(<1430649..>1431999) /locus_tag="CRE_04886" /db_xref="WormBase:WBGene00055916" mRNA complement(join(<1430649..1430880,1430928..1431196, 1431254..1431350,1431402..1431593,1431638..1431766, 1431854..>1431999)) /locus_tag="CRE_04886" /product="hypothetical protein" /db_xref="WormBase:CRE04886" /db_xref="WormBase:WBGene00055916" CDS complement(join(1430649..1430880,1430928..1431196, 1431254..1431350,1431402..1431593,1431638..1431766, 1431854..1431999)) /locus_tag="CRE_04886" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86828.1" /db_xref="WormBase:CRE04886" /db_xref="WormBase:WBGene00055916" /translation="MHPNIQKSWNILKTATFFIVLVTLLFATSVINYLLTPKIAHLCD FYDNRNTTSFDVTREECESQRRATVLFIVFCLVRLISNKFEGFIGSKFLKTCSVRATF PGRHFGAALGFPFLTRSLSNSIRVASAPIFLVIIFASTSIAFYPYAKDFAKLSRLIYN AVQRRHYLYNRSMIYTFISIYFYFSTVLIELLDVSFGIYCHQTIFGFPVLFPNFNFPL FLFLLHTVILQHHRAMPAIIYEASFSNFSFRIYNFQVNNEDCFIQLNRMRCITNKDCP QMSTAFPLDATPSKTTTIQRRAFEGRIIQIRHYRELDDILPCKVSTQVRKVSTFSSRP PSYCVPPLPRDLPSTILDLE" gene complement(<1432840..>1436383) /locus_tag="CRE_04887" /db_xref="WormBase:WBGene00055917" mRNA complement(join(<1432840..1433142,1433200..1433655, 1433697..1434166,1434214..1435243,1435290..1435913, 1436201..>1436383)) /locus_tag="CRE_04887" /product="hypothetical protein" /db_xref="WormBase:CRE04887" /db_xref="WormBase:WBGene00055917" CDS complement(join(1432840..1433142,1433200..1433655, 1433697..1434166,1434214..1435243,1435290..1435913, 1436201..1436383)) /locus_tag="CRE_04887" /note="contains similarity to Pfam domain PF00023 Ankyrin repeat; contains similarity to Interpro domain IPR002110 (Ankyrin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86560.1" /db_xref="InterPro:IPR002110" /db_xref="PFAM:PF00023" /db_xref="WormBase:CRE04887" /db_xref="WormBase:WBGene00055917" /translation="MREPLSYGAHSHGASSHEVCRNEAVGKFMEWFQDTENLEKRTKR LEIVGREHCGKTWFAKKLSEMSECVASHFCRPDEPQSSEPATVIRSIGEQLMRRFPNL VLPRLTTVTLLEDTLSALDHFLRLPLETMPSSSKQVFIVIDSVDEEETQILIEMLIDI LPTWTRMVTTAKQKSPVDKEKNKNEILELDSIDDVDFNRFIRSKLPHCHVEEIREASE GSWFYVDQLSRAVEHGLIPSDVIPPNGVEKMMHLIARSLPGAFADIVRLAKTSRCRPT NQQLLAVSQMLIARDISVLEKEIRLIRQLIGTSQFSNSDSELFDVPDIWFYLVGEENL RCHAAWAEHFKTKRRKCAQDICELAYHLSHSTTNPINAIKTLQSVGASDLILRCHIID LPTTALLKSAGARLEENNYDIVYACSVGDVSYLDAILREIKPIPMVCFPSLLFKSQFF QEICFGLLTAAARGNIEMCRFLADHFPQLVTSSCCGEWNALRSAACYGQLEILHLLLD KGVDVDECGHSDRTALRAAAWSGQLAAVQLLLQTGAQVDRRDSEQRTALMAAAFMGHR DVVSVIIQYGADVNAVDKSGATALHLNLSNGSKQDEHSETTQLLLENNADCKIEDGNG RVALHLAAYHGDPCLSFIFEKNPIIDIMDNMGQTPLMLAASQGQLTSVQFLTETAHAD VDSIDNNGRTSLQWAAINGHSKVVEYLCGIGSDEGHKDNDGAVALHYAVTHDNVELVK PLTNKHTVEAKDRYGQHPMMIAAANGNLKVLEYLMEVSDIINQPDHEGRTTLSLAAMA AHTQIIESIAPKITDWSQKDPDGTPLIHTLILSNLIYVAEVYLTHGGSSSDSDAHGRT CVHVVSSTNDVAAAKMLKRIGGVNFEAVDRGGRTALMTAVWSRHVAISVFLLDCCAVD PNRIDRQGATALSIAAQIGDRDLVNLLLKFGAEPKIKDSMGRTAMDVALISGNDSIVS LLQTANGSSGSSGIGSSVPNSPMDASKQRIRQIRATSSLRSQRIDHNFK" gene complement(<1443867..>1444965) /locus_tag="CRE_04888" /db_xref="WormBase:WBGene00055918" mRNA complement(join(<1443867..1443965,1444016..1444470, 1444513..1444772,1444813..1444894,1444944..>1444965)) /locus_tag="CRE_04888" /product="hypothetical protein" /db_xref="WormBase:CRE04888" /db_xref="WormBase:WBGene00055918" CDS complement(join(1443867..1443965,1444016..1444470, 1444513..1444772,1444813..1444894,1444944..1444965)) /locus_tag="CRE_04888" /note="contains similarity to Pfam domain PF00300 Phosphoglycerate mutase family; contains similarity to Interpro domain IPR013078 (Phosphoglycerate mutase); coded for by the following C. remanei cDNAs: DY526800" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86601.1" /db_xref="InterPro:IPR013078" /db_xref="PFAM:PF00300" /db_xref="WormBase:CRE04888" /db_xref="WormBase:WBGene00055918" /translation="MRGCGQGKNHSDHSDIGSYNCPSNRDHHDSSHRNLHQNEMYVSP SVMMVMRHSERVDDCCPGWIEKCNKEGKYEPFDLNMPSRLPIQRPLKDYTRDTCLTRS GVVLAQMVGRGLLMTDNTPDVIYCSPSLRCIQTATWVREMSGSKSLIRVEPGLFENFH YPHGVPRFITQLQRHVFPVDKTFRPFLSLESVVGRQETNDDYNERIKMILNAIAEQSE VSHYEKQLKVLVVAHASTVDMAVGLLRDKPRKTVDMELDNIAIPVPYCSLAYLKKKNS YWIPSAHQIPPVTYEFLSTKYNHYFVHRP" gene <1446911..>1447372 /locus_tag="CRE_04683" /db_xref="WormBase:WBGene00055919" mRNA join(<1446911..1447085,1447131..>1447372) /locus_tag="CRE_04683" /product="hypothetical protein" /db_xref="WormBase:CRE04683" /db_xref="WormBase:WBGene00055919" CDS join(1446911..1447085,1447131..1447372) /locus_tag="CRE_04683" /codon_start=1 /product="hypothetical protein" /protein_id="EFO86832.1" /db_xref="WormBase:CRE04683" /db_xref="WormBase:WBGene00055919" /translation="MACKINFGVQLNSLSFCGPDNIAGLSKSNVKMASSSTGTIFTSI EMDKFSTDIFGCYDEIFIANTKIGIQSLDLETSKLIPVYSLNKKTREELSCSCYNPIS ENMITAVWCPDTRVTRLSKIDTRSPQGSHDLITVSS" CONTIG join(AAGD02001336.1:1..9773,gap(10),AAGD02001337.1:1..17239, gap(4514),AAGD02001338.1:1..62112,gap(56),AAGD02001339.1:1..7996, gap(14969),AAGD02001340.1:1..65403,gap(10),AAGD02001341.1:1..63083, gap(680),AAGD02001342.1:1..12320,gap(267),AAGD02001343.1:1..27860, gap(10),AAGD02001344.1:1..94400,gap(10),AAGD02001345.1:1..111892, gap(10),AAGD02001346.1:1..23692,gap(10),AAGD02001347.1:1..57961, gap(10),AAGD02001348.1:1..48469,gap(1715),AAGD02001349.1:1..37439, gap(10),AAGD02001350.1:1..7032,gap(10),AAGD02001351.1:1..109868, gap(1026),AAGD02001352.1:1..905,gap(10),AAGD02001353.1:1..13304, gap(433),AAGD02001354.1:1..965,gap(10),AAGD02001355.1:1..973, gap(554),AAGD02001356.1:1..65220,gap(10),AAGD02001357.1:1..76927, gap(10),AAGD02001358.1:1..40710,gap(10),AAGD02001359.1:1..19071, gap(405),AAGD02001360.1:1..1372,gap(10),AAGD02001361.1:1..89934, gap(2047),AAGD02001362.1:1..42741,gap(1454), AAGD02001363.1:1..102033,gap(10),AAGD02001364.1:1..48498,gap(1276), AAGD02001365.1:1..1206,gap(2842),AAGD02001366.1:1..17424,gap(10), AAGD02001367.1:1..61355,gap(10),AAGD02001368.1:1..17804,gap(10), AAGD02001369.1:1..58479) //