LOCUS DS268416 1571176 bp DNA linear CON 11-OCT-2010 DEFINITION Caenorhabditis remanei Scfld02_9 genomic scaffold, whole genome shotgun sequence. ACCESSION DS268416 AAGD02000000 VERSION DS268416.1 DBLINK BioProject: PRJNA12588 BioSample: SAMN00627085 KEYWORDS WGS. SOURCE Caenorhabditis remanei ORGANISM Caenorhabditis remanei Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1571176) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE PCAP assembly of the Caenorhabditis remanei genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 1571176) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis remanei Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (17-JUL-2007) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA COMMENT The organism is Caenorhabditis remanei Sudhaus, 1974; strain PB4641. This strain is derived from the wild isolate EM464. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain EM464 was established with individuals collected from a pillbug (Armadillidium vulgare) in Brooklyn, New York, NY, USA in June 1990 by Scott Baird. EM464 was described as /Caenorhabditis vulgaris/Baird, Fitch & Emmons, 1994, which was later shown to be a junior synonym of C. remanei (Sudhaus & Kiontke 1996). Annotation was added to the scaffolds in October 2010. FEATURES Location/Qualifiers source 1..1571176 /organism="Caenorhabditis remanei" /mol_type="genomic DNA" /strain="PB4641" /db_xref="taxon:31234" gene complement(<1205..>4910) /locus_tag="CRE_29636" /db_xref="WormBase:WBGene00064334" mRNA complement(join(<1205..1553,1618..1765,2441..2696, 3220..3357,3415..3594,3704..3836,4807..>4910)) /locus_tag="CRE_29636" /product="hypothetical protein" /db_xref="WormBase:CRE29636" /db_xref="WormBase:WBGene00064334" CDS complement(join(1205..1553,1618..1765,2441..2696, 3220..3357,3415..3594,3704..3836,4807..4910)) /locus_tag="CRE_29636" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PVV2" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12517.1" /db_xref="WormBase:CRE29636" /db_xref="WormBase:WBGene00064334" /translation="MSEDGIKEIEENTEKVNLESEMANDGEVDEENDDITIPELPEGK ILELRLLSNWGDPNYIGLNSVEIFTSTGERAVVENITTNVTEYTGNLESLLVERIRCK DTEKMWCAKKSPENPDGQIILRLEFKESCKLALVRFWNYNASRVHAQIGVRYLEMNLD GIGIFRGELECAFSADSEFTPIMGETVLFTTSESILELIAVHDVCLINLPEEPIANTT TLELLKADHLTPYRPSTCEEKDTPNTPTISLPAPKFPAALSCPPTGYRHDVKVLHLEL LTNWGMDGLIGLTGMELVDDRNQLIDESQFTVVTSDGNKEQTAKLFNGRNLTRDPQDM WLVDFDSKKPVTITITFHEIVALKAISIWNYNASFEMSYAGVKASKIYVNGKLFKNIV FRKATGFVYFDYVQDIVLDPNMTENEHMPKGISQSIGGCKWNY" gene <5932..>8433 /locus_tag="CRE_29423" /db_xref="WormBase:WBGene00064333" mRNA join(<5932..6028,6095..7386,7426..>8433) /locus_tag="CRE_29423" /product="hypothetical protein" /db_xref="WormBase:CRE29423" /db_xref="WormBase:WBGene00064333" CDS join(5932..6028,6095..7386,7426..8433) /locus_tag="CRE_29423" /note="contains similarity to Pfam domain PF02206 Domain of unknown function; contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN); coded for by the following C. remanei cDNAs: DT933655" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12646.1" /db_xref="InterPro:IPR003125" /db_xref="PFAM:PF02206" /db_xref="WormBase:CRE29423" /db_xref="WormBase:WBGene00064333" /translation="MIRLIPFVVWIGAILVNGHPPGNLTRFSRASDAELTTSLKQMQM LARITNGIYLQQGMIKGTIPPADLVSELLNLEAVKLTEIQNLDVGKLEGVAKNIDELP GKLKTNDGVVNLENRLALLRSIIDLSNGVASLAAPDASFKTEVDTLKDIDGIEWDNFR KYSEGLHSFLSNRKKIEQGIPVKDKKAHEDVLQQVRKAADDLKLDLTQNYVNLKSDAI TTAEGTFLNWFSIRRSMAEWNKNDKVMKYSKPDDDNNINFVGENIKNMGEVIGEVKKE NLKFNTLEHVFDSRIHRSGSRDLKHTPAFSEGPSDIGLISKDFENGWIQSVVGKEYPK LAAALKSLETIQKLTEDVENSLGSPSKDTLKSISEVVNSITGASQLTVSFDDLASKLK DVQESISASNIIPAQWDTYNTLIEHVSSLFDQITAADAVVELSKETITEDMKKNLEHI RNITDPTHKDDPVAVLEKLDSFSDKLADTSSLVTALNTTNQAQPVKDSASQISKNFNE LNNYVTNSKKFLDVLAQLRGIGGFESIEPVIKLRRKLSQLTKNKGNLDCPSLVQNIGK MQPKLKALEAEITKLKGMRNGETGALMYLNYAKKDSDTLGSATRGIASMQQMTKDPVD IKQLADAVGTIDSERKTSLVKLSAEEEKSLDELSRLEDDINSLKYIINVYILYLKISK SEKLSDHADIFDRAASVNGISTDFKTAIVLIEKLANDPFSLASDDLRKSVPIWEKLDS IGLDFAKYQTDFQSAKKSLSSLEATFSKLHRSFALTASSPSNSSESESLDDVFEIRYS " gene <10746..>13630 /locus_tag="CRE_29424" /db_xref="WormBase:WBGene00064332" mRNA join(<10746..10842,10909..13174,13224..13456, 13503..>13630) /locus_tag="CRE_29424" /product="hypothetical protein" /db_xref="WormBase:CRE29424" /db_xref="WormBase:WBGene00064332" CDS join(10746..10842,10909..13174,13224..13456,13503..13630) /locus_tag="CRE_29424" /note="contains similarity to Pfam domain PF02206 Domain of unknown function; contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12475.1" /db_xref="InterPro:IPR003125" /db_xref="PFAM:PF02206" /db_xref="WormBase:CRE29424" /db_xref="WormBase:WBGene00064332" /translation="MIRLIPFVVWIGAIFVNGHPSGNLTRFSRATDAEFTTSLKQMQM LARITNGIYLQQGMIKGTIPPADLVSEILNLGTAKLSDIDKIKTENLKEMASKIEQVP GKLKTDKNVETIEERLVVLNSIVKTSNGVESLEKLGDDYKTEVKKLEALKTDWVTLET YAGYLQNFLVESAKLEGDIARGKIRPTFGTIASALDIFKTGNLEAYKTVTTTASLENY KPKFSSLSNFHDSVELFVDKNIKFEASDTAKMTTISGHASALASMITDVQSSKVEFEL LKQILLQRTHQNTHKIFAHTSGFPNGFSDISTINADLDDKWIQKIVGGNAENLKSSFK SLGTIGNLSQIVDETIGKTSDGLDALLETLPRIAQLSSETMSGLASNLAGIQSTVQVD SITPKNYEDYKVLHGAIRSVFDQLSAIDKVIGVCEQLASPEYTGKLESVIKIITLDND DQGPERLVQLKGDKNYQDLLTLVKSVEDSSKVLSAAVTLVDDAKTIDGKFGELNTYVD GSNKFLDMLKSLKNVESLGSVESFVKVRRSVGGMNADDIKKLSTVAGNIENAKSKLKE LETAINKMKGFKSAGTDVLISLNDAKKDSDTLGSATRGIASMQQMTKDPVDMKQLIHA VGTIDSERKTSRVTLSAEEKKSLDELRRLERDINTLKSSIGQYISSVTASKSDKLSDH SDIFDKAASVNGISTDFKTAIVSIEKLANDPSSSAPDLLRKDVPIWEKLDSIGLDFAK YQTDFQSAKKSLSSLEATFAKFHGSSVVATSSSSNSSESESDDNPSWGAFGRNLGIIT GIIVALLVIGIGGGMTFLHLKRKREMKRKGKTRGIEEGGGGKKSKGKKSKGKSTGATE KTGGDTETTGTPTTTNDTMSKSVTIQEEPKSKMKKTEKSKKKGDKKKKGTK" gene complement(<14029..>15534) /locus_tag="CRE_29637" /db_xref="WormBase:WBGene00064331" mRNA complement(join(<14029..14110,14435..14637,14691..14858, 14910..15092,15139..15232,15275..>15534)) /locus_tag="CRE_29637" /product="hypothetical protein" /db_xref="WormBase:CRE29637" /db_xref="WormBase:WBGene00064331" CDS complement(join(14029..14110,14435..14637,14691..14858, 14910..15092,15139..15232,15275..15534)) /locus_tag="CRE_29637" /note="contains similarity to Owenia fusiformis Uncharacterized proline-rich protein (Fragment).; SW:P21260; coded for by the following C. remanei cDNAs: DR780088, DT936374" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12522.1" /db_xref="WormBase:CRE29637" /db_xref="WormBase:WBGene00064331" /translation="MSEISYDGSLIIPDDDAEETIEPEDAVNPIDAALAADLVDSIKP DDPVDPVDPVTPADPVAPVDPVEPAAPPMPPPPPTPPKPAVKCSRSDNASSQQLIMRL EKFVINQNLDKSYKKIATDGISSSKRTLESLLARNGGHQNLLNEEMSRINNKNYTLDA NGRVCLVKNPSNETSRHQELVTLQKDTHELRCLREYLMLALEAIMHNHREMMVNYVQT VRETPRQIPQSAIDNAMAKANTETIEDFVQMTLAVDETIAREEIRSEQRKKLKKSIEA ETFLMRMMLEMEDIREANVDDLVALWKSHQRPVTAKQSPNPNANKASGDTPQI" gene complement(<15887..>18307) /locus_tag="CRE_29638" /db_xref="WormBase:WBGene00064330" mRNA complement(join(<15887..17191,17611..18093,18137..>18307)) /locus_tag="CRE_29638" /product="hypothetical protein" /db_xref="WormBase:CRE29638" /db_xref="WormBase:WBGene00064330" CDS complement(join(15887..17191,17611..18093,18137..18307)) /locus_tag="CRE_29638" /note="contains similarity to Pfam domains PF07719 (Tetratricopeptide repeat), PF00515 (Tetratricopeptide repeat) (5)contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR008940 (Protein prenyltransferase), IPR001440 (Tetratricopeptide TPR-1), IPR013105 (Tetratricopeptide TPR2), IPR013026 (Tetratricopeptide region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12467.1" /db_xref="InterPro:IPR001440" /db_xref="InterPro:IPR008940" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR013105" /db_xref="PFAM:PF00515" /db_xref="PFAM:PF07719" /db_xref="WormBase:CRE29638" /db_xref="WormBase:WBGene00064330" /translation="MSADKMFSTPIERSLNRLTLIQQAAARSGALPAAGQFRNSKLSP FEVSQMSGVSISMIERGKINSREFIQELEWFQQETSTRCFIDGELWTNEILAYLPNEW LVESETTVWHTNVKPFVNDSLSSITSPSSSTQREDVTPKKDSYSSRFARTLIKNKDFR RAAHFLEKTIKDSRSDHFLYYRCLFLAYYQEHLENDSEGVERKTSFAEEKSPFSILYQ RMIDEKLRENDDVWFEYLMGLLEVQLGLKVEAEKSFRSVIIREPRHWLAWEGLSLLIC DIEDADTFVTSSNIKSVWMSDWFMVLVLQRFHQHSMAIQKAEQLVTRGMTGIPMIITK IAACSNARHDHDQAIANFEDVRKIDPYRLTDLHLLSDSLYIRNDQRQLSALAMEVYKV HKFRWETCCIVANYHAMRRDSEHAIKFFQRALRLNPGFAALWVLIGHEFMEMKNNAAA CVSYRRAIEIDPADHRGWYGLGQMYDIMKMPAYSLYYYQEAQKCKPHDSRLLVALGEV YSKLNRIDDAEKCFTGAYLFGDVEGNALWNLAKLHEKYRDNHRAAQVFEVFLVVYEHV TSAEEKIIYAVAFLANHFFKNDNFEKAGEFATKCMAYESICQEGNRLFREISKVHRCE AEKAAERARRSGEGTSSQQAAQNDEEGG" gene <18604..>20737 /gene="Cre-mut-2" /locus_tag="CRE_29425" /db_xref="WormBase:WBGene00064329" mRNA join(<18604..18768,18819..19057,19105..19323,19685..19777, 19831..19916,19960..20158,20354..20479,20530..>20737) /gene="Cre-mut-2" /locus_tag="CRE_29425" /product="CRE-MUT-2 protein" /db_xref="WormBase:WBGene00064329" CDS join(18604..18768,18819..19057,19105..19323,19685..19777, 19831..19916,19960..20158,20354..20479,20530..20737) /gene="Cre-mut-2" /locus_tag="CRE_29425" /note="contains similarity to Pfam domains PF03828 (Poly(A) polymerase), PF01909 (Nucleotidyltransferase domain); contains similarity to Interpro domains IPR002934 (Nucleotidyltransferase), IPR002058 (PAP/25A-associated)" /codon_start=1 /product="CRE-MUT-2 protein" /protein_id="EFP12312.1" /db_xref="InterPro:IPR002058" /db_xref="InterPro:IPR002934" /db_xref="PFAM:PF01909" /db_xref="PFAM:PF03828" /db_xref="WormBase:CRE29425" /db_xref="WormBase:WBGene00064329" /translation="MTSNRDAYQIAYEVCSNLGSFHKFNERFSPVLDVFEDEFHVLSC NMFDYFDTSKQPEEEFNRKMNWCYQLKNIISKHNPTWLFNIVPTGSTVTGLATKNSDL DVAIHIPQAARLLDELYPQIALSEEERFCKWRGMQLEILQTVRLILEKDEQIKPLVNW EKGIHLVQAQIQILQIETADGIECDISVVMEPFLSSMHNSFMIRHYVHIDHRFATLCA VVKKWAASTGVKNPKDGGFNSYALVILVIHFLQCGAYPPILPNLSKLYKDDNFIATND KKYPELLDFGAPLPRDLPKIQMNQASTAQLFLEFVHYYFEFDFQETYISMRDSIVKSR TRCPNETVKNEKQKDVYIEDPFDAHNPGRTVRSLTNIKRILRETLNMFIPPIEPTGNL QNQKRNFLFPRLDDIINMPSSSHFSPPPPVPEEEESSDVPSTSGIPPVSFRR" gene complement(<20978..>31808) /gene="Cre-bli-4" /locus_tag="CRE_29639" /db_xref="WormBase:WBGene00064328" mRNA complement(join(<20978..21104,21153..21303,21357..21584, 21841..21949,22253..22431,22810..22882,28295..28425, 28743..29059,29124..29528,30007..30405,30451..30656, 31249..31683,31728..>31808)) /gene="Cre-bli-4" /locus_tag="CRE_29639" /product="CRE-BLI-4 protein" /db_xref="WormBase:WBGene00064328" CDS complement(join(20978..21104,21153..21303,21357..21584, 21841..21949,22253..22431,22810..22882,28295..28425, 28743..29059,29124..29528,30007..30405,30451..30656, 31249..31683,31728..31808)) /gene="Cre-bli-4" /locus_tag="CRE_29639" /note="contains similarity to Pfam domains PF00082 (Subtilase family), PF01483 (Proprotein convertase P-domain); contains similarity to Interpro domains IPR006212 (Furin-like repeat), IPR000209 (Peptidase S8 and S53, subtilisin, kexin, sedolisin), IPR015500 (Peptidase S8, subtilisin-related), IPR002884 (Proprotein convertase, P); coded for by the following C. remanei cDNAs: DY524945, DR776201" /codon_start=1 /product="CRE-BLI-4 protein" /protein_id="EFP12577.1" /db_xref="InterPro:IPR000209" /db_xref="InterPro:IPR002884" /db_xref="InterPro:IPR006212" /db_xref="InterPro:IPR015500" /db_xref="PFAM:PF00082" /db_xref="PFAM:PF01483" /db_xref="WormBase:CRE29639" /db_xref="WormBase:WBGene00064328" /translation="MRISIGRIGWQLLAVLVSVVLSNEHDSLCDEKKGEICAEPIHTV IRLAKRDDELARRIAEDHDMHVKGEPFLDTHYFLYHSETTRTRRHKRAIVERLDTHPA VEWVEEQRPKRRVKRDYILLDNDSRHANPFRRSVLSRDGTRRSQRQQPQSPREIPSLP FPDPLYKDQWYLHGGAVGGYDMNVRQAWVQGYAGRNVSVSILDDGIQRDHPDLAANYD PLASTDINDHDDDPTPQNNGDNKHGTRCAGEVAAIAGNNQCGVGVAYKAKIGGVRMLD GAVSDSVEAASLSLNQDHIDIYSASWGPEDDGKTFDGPGPLAREAFYRGIKNGRGGKG NIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDNHRPWYLEECPSSIATTYSSA DFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALALEANPELTWRDMQHLVLRTAN WKPLENNPGWSRNGVGRMVSNKFGYGLMDGGALVNMAKTWKTVPEQHICTYEYRLANP NPRPIVGRFQLNFTLDVNGCESGTPVLYLEHVQVHATVRYLKRGDLKLTLFSPSGTRS VLLPPRPQDFNANGFHKWPFLSVQQWGEDPRGTWLLMVESVTTNPAATGTFHDWTLLL YGTADPAQPGDPVYSATPATSQGVLSRVQQLTSQVEETAPISFPDLTSAGNCHAECNG GCTESNSATSCFACKHLTQTLRNKGGSGFKCVQKCDDTYYLDGDKCKMCSSHCHTCTK SEVCETCPGSLLLIDVDNMPHYDHGKCVESCPPGLVADYESNLVQAKCIWRKDLCGDG YYINAIGKCDLCDSACETCTAPGPMSCEKCATGYGKGSIGYCRPCCTPGTGKSWQCED CSKPDPALETSKSSTGYGWMFWISVLSIAACGFCACRKCANEVKGSSVEYAPLPHYNA TNGAVNLGVNSDDDDDEEEDDVFVNVPTSQAV" gene <48490..>49150 /locus_tag="CRE_29426" /db_xref="WormBase:WBGene00086164" mRNA join(<48490..48563,48616..>49150) /locus_tag="CRE_29426" /product="hypothetical protein" /db_xref="WormBase:CRE29426" /db_xref="WormBase:WBGene00086164" CDS join(48490..48563,48616..49150) /locus_tag="CRE_29426" /note="contains similarity to Burkholderia pseudomallei Putative siderophore non-ribosomal peptide synthase.; TR:A3NHQ6; coded for by the following C. remanei cDNAs: DY528325, DY526219, DR407968, DT934642, DR779708, DR781572, DT936227, DR778903, DR781036" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12736.1" /db_xref="WormBase:CRE29426" /db_xref="WormBase:WBGene00086164" /translation="MQPINTFLLAILLIAAAPVVFSEDVAVTPAPGDEIAVPGVDEAL PATEADVPTETKEETEEATEAAAVEATKVPEVPEVPEATDATAPEVTEAPEAAPEVPE PTDATEPEVTEAPEAKEAVVTEAPEVVVTEAPVTEAPEVVEEVTSRPAFTEEPQVADD EDIEDVTTLEDLFNSTTNSTSAGFRSSGTFFVAPIVLYALVQ" gap 51016..51025 /estimated_length=10 gene <51693..>52270 /locus_tag="CRE_29427" /db_xref="WormBase:WBGene00086099" mRNA join(<51693..51726,51772..52106,52151..>52270) /locus_tag="CRE_29427" /product="hypothetical protein" /db_xref="WormBase:CRE29427" /db_xref="WormBase:WBGene00086099" CDS join(51693..51726,51772..52106,52151..52270) /locus_tag="CRE_29427" /note="contains similarity to Saccharomyces cerevisiae Nucleolar protein of unknown function implicated in ribosome biogenesis; TMA23 may be a fungal-specific gene as no homologs have been yet identified in higher eukaryotes; SGD:YMR269W" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12330.1" /db_xref="WormBase:CRE29427" /db_xref="WormBase:WBGene00086099" /translation="MIQVIINWLFDNKSVLFGALLPILLSPVVGFDCAGKNKIGELQV RSTGIRTLVVTGKNKNMKKKKQEETESENSKKKKKKRSKEDTSGDSVEDSAPMKKSVM KKSSPFKKLKNKKSKGPAIYKPPPLHERPKNPGFEAPIEPTEDTNTYRQIEGFRDAQN FA" gene <55293..>57938 /gene="Cre-let-381" /locus_tag="CRE_29428" /db_xref="WormBase:WBGene00064327" mRNA join(<55293..55300,56380..56626,56680..57006,57356..57603, 57659..>57938) /gene="Cre-let-381" /locus_tag="CRE_29428" /product="CRE-LET-381 protein" /db_xref="WormBase:WBGene00064327" CDS join(55293..55300,56380..56626,56680..57006,57356..57603, 57659..57938) /gene="Cre-let-381" /locus_tag="CRE_29428" /note="contains similarity to Pfam domain PF00250 Fork head domain; contains similarity to Interpro domains IPR011991 (Winged helix repressor DNA-binding), IPR001766 (Fork head transcription factor)" /codon_start=1 /product="CRE-LET-381 protein" /protein_id="EFP12690.1" /db_xref="InterPro:IPR001766" /db_xref="InterPro:IPR011991" /db_xref="PFAM:PF00250" /db_xref="WormBase:CRE29428" /db_xref="WormBase:WBGene00064327" /translation="MERHSLYSLANALGPLKLDNDSSSTAQILPKIKTEKFEEEEEDE DNENLSDDYEEMKEDQDECRSKKRKEKPPYSYIALIAMAISKRPDKKATLAEIYSYLQ ENYEFFRGTYAGWRNSIRHNLSLNECFVKLPKDTGESYRGRKGHKWTISDSCEFMLEE NGFRRRPRGYKARKRTHFSGSTDGNEMASIGGGAVYDYPCSTTDYTDSNGSSISNEVK SAMIGDDCGSTISDQLVSSTTSITLPPLTGPDHSPIYPTPSPYFGYGSADFPMQWASP TYDWPYYATPQIGLCSSDFNGIIPSPTITPHVTPQVSPYFYPPAVLGTSSFMDDWRFG VSSSSMPSGVYATSSSFLSSESSDIDVITVQQPSD" gene complement(<58653..>62579) /locus_tag="CRE_29640" /db_xref="WormBase:WBGene00064326" mRNA complement(join(<58653..58701,58749..58933,59029..59643, 59729..59801,59997..60040,60129..60243,60291..60361, 60607..60666,61179..61385,61429..61602,61659..62021, 62370..>62579)) /locus_tag="CRE_29640" /product="hypothetical protein" /db_xref="WormBase:CRE29640" /db_xref="WormBase:WBGene00064326" CDS complement(join(58653..58701,58749..58933,59029..59643, 59729..59801,59997..60040,60129..60243,60291..60361, 60607..60666,61179..61385,61429..61602,61659..62021, 62370..62579)) /locus_tag="CRE_29640" /note="contains similarity to Pfam domains PF00013 (KH domain) (3), PF02118 (C.elegans Srg family integral membrane protein); contains similarity to Interpro domains IPR004087 (K Homology), IPR004088 (K Homology, type 1), IPR000609 (Serpentine gamma receptor, Caenorhabditis species); coded for by the following C. remanei cDNAs: DT937247" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12539.1" /db_xref="InterPro:IPR000609" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="PFAM:PF00013" /db_xref="PFAM:PF02118" /db_xref="WormBase:CRE29640" /db_xref="WormBase:WBGene00064326" /translation="MSDSDTDRMYIDCDFSYDPKIEIMKFILQFIYLVMGIALNLVVL RTLVWKRRDIFMTNSFFVLFAVDCVINTVIMIVEGILPRFFIYVTPLCPLLSEYFSTP LFGFKIVMILSHHAIISKSIMQSFLVLNRMTCVILPIAHDFIWRENIKFVILFVVLCP LSVDWNLAISRVYMQSTYGGFWVNYMKKVQWASQSRFQLAFITIALFFTFICTTITLI KLPKRSKEIEKSITNATLIISIIFTCKVLFQIYYSFFYHHADSSSAIYGLSFLALDFS AIGSPIIMICVSSALRKHLFSNNRIDTTNVSKLQSRTSGIVVETSTMMIKVGAAAVGI DSPKAMKREHDNDDADRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGE NIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILRDVLPRLEDNFSERDPCEVR MLIHQSHAGALIGRNGTKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLAII EEVMKELKEIPIKGSSTPYLPSFHYDPSNISEYGGFPGNLSSGGPQNSRGPAPPRGGQ GPAGGQRSYGGGAITPGGGPRSFESGDFQQFRGGPMPGYAMNAPGYAPQQGQFGAPAN AGYGYGPGGGGPVTTAQVSFVTIPSDLGGTIIGRGGERIARIRQESGAQITLEPSTGQ PERIITIKGTEPQIHSAQYLLQQCVRNSTQGRERFGGNV" gene complement(<62916..>64525) /locus_tag="CRE_29641" /db_xref="WormBase:WBGene00064325" mRNA complement(join(<62916..63005,63657..64244,64295..>64525)) /locus_tag="CRE_29641" /product="hypothetical protein" /db_xref="WormBase:CRE29641" /db_xref="WormBase:WBGene00064325" CDS complement(join(62916..63005,63657..64244,64295..64525)) /locus_tag="CRE_29641" /note="contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12345.1" /db_xref="InterPro:IPR000609" /db_xref="PFAM:PF02118" /db_xref="WormBase:CRE29641" /db_xref="WormBase:WBGene00064325" /translation="MSKFFVPNVSHSEDPILFECDESYNSKTEILKYLIQFVYLSIGA FLNSAIIYTVCVKNRKVYRQNSFFIFFSMDCGVSLILLLSNIFFDRPFIYITPICPLL NEYFSTPLVFFKFIMVLSHHCKICKSVIQSLLVLNRMTSVLFPINHNRMWMKNVQWIV PLVLLIPLSVDWNLVISRAYMMPTYGGFWVNYIKKVSWVRKAFCVGKEKNFQASQSLF QLVFIIIALSFTFICTFVTLYTLILLPKRLRDLEKSITIVTIINSAAFSTVGVFHILF NFFSFNTMVTSVFALTLFAYDFLNVG" gene complement(<66031..>68269) /gene="Cre-col-58" /locus_tag="CRE_29642" /db_xref="WormBase:WBGene00064324" mRNA complement(join(<66031..66654,66695..66720,68000..68075, 68117..>68269)) /gene="Cre-col-58" /locus_tag="CRE_29642" /product="CRE-COL-58 protein" /db_xref="WormBase:WBGene00064324" CDS complement(join(66031..66654,66695..66720,68000..68075, 68117..68269)) /gene="Cre-col-58" /locus_tag="CRE_29642" /note="contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies); contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-COL-58 protein" /protein_id="EFP12650.1" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="WormBase:CRE29642" /db_xref="WormBase:WBGene00064324" /translation="MTSSSKWDNVAFGLSAACLSAGIILLVSIATWQTEITKIAEEAI VETQIFQETSEKIWDDLVFVATGETDRHKRHAYLTRAPVLPDVIVEDHQDNLDLMGRM DVSLKSMAFPNSSIDFSDDGEPGVPGQSGDDDVSVLRHDPGRCAQCPAGPMGPPGPRG DFGPPGRTGAPGINGIPGRPGQPGYPGEPGLPGPVGEPGTDGKPGNRGKDGVRVRRIP GPPGPPGAEGDIGVPGGQGSPGLAGGPGDSGAPGPQGPQGQKGIDGVPGGFGQPGPQG VDGEYCPCPKQIKKSK" gap 67247..67256 /estimated_length=10 gene complement(<68638..>70950) /locus_tag="CRE_29643" /db_xref="WormBase:WBGene00086166" mRNA complement(join(<68638..68801,69387..70042,70721..>70950)) /locus_tag="CRE_29643" /product="hypothetical protein" /db_xref="WormBase:CRE29643" /db_xref="WormBase:WBGene00086166" CDS complement(join(68638..68801,69387..70042,70721..70950)) /locus_tag="CRE_29643" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12741.1" /db_xref="InterPro:IPR003002" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE29643" /db_xref="WormBase:WBGene00086166" /translation="MNLSLQPKTLSQYYLTNYTYCPPNKNLIESPDFLLKAAISESFI LIPVNLFGIYCIVWHTPKYMESFQFHLFHLHFWLLLLTICYTLLTTPYYFFPVQVRYS LGLFRFISMKNQHQHYIVSCIYGGILVSVLMMFENRHRQLVPPNDLFYKLRNSHRVFL VILNFCCGSAGSLPIFMEDLSNQEQMKLKYLEEIPCPTEIYFDPHAFALGNSTNIYTA IALIFNLIGAVQLFFFIIHSTMYLRKIQLIQTFSIRTKRIQKSFFKSALAQVASPISV LLVPLMLLTYVRITRQYLQGLTNICILSIPAHSIFSTASLLIFNAPYRKFTKDLFRLS EYPSNRVVVPSLQQQ" gene complement(<71689..>74071) /gene="Cre-srh-50" /locus_tag="CRE_29644" /db_xref="WormBase:WBGene00064323" mRNA complement(join(<71689..71855,72521..73173,73851..>74071)) /gene="Cre-srh-50" /locus_tag="CRE_29644" /product="CRE-SRH-50 protein" /db_xref="WormBase:WBGene00064323" CDS complement(join(71689..71855,72521..73173,73851..74071)) /gene="Cre-srh-50" /locus_tag="CRE_29644" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site)" /codon_start=1 /product="CRE-SRH-50 protein" /protein_id="EFP12605.1" /db_xref="InterPro:IPR003002" /db_xref="InterPro:IPR003006" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE29644" /db_xref="WormBase:WBGene00064323" /translation="MSSQISLQDYFLTNYTKCSQSFSILSTPEFLSISSKTEFILILP INIFGFYCIVFHSPRYMKEFQWHLFHLQFWFLMLTVFYSLLTTPFQFYPAQVRCSIGL LHHLNISSQYQMCIVHFVYSGIATSVIALFENRHKHLVPSTDIFYRINNFHRILIGIL NFSAGLTNSMPVLMQDESQELLKLKYLEVLPCPINLYFDSCSFAVVKKADIWSTLAYS SNLLIAIEIIFLVVHSYMYLRKSQLITTFSARTKQLQKAFFKAAIAQASAPIFVLVVP IFLLAYVYSTGAYLQGLINICILFIPANSVLSTASLLIFNAPYRNFLKQLLVSRTAPE VSSSRVAAISSV" gene complement(<74246..>76891) /gene="Cre-srh-51" /locus_tag="CRE_29645" /db_xref="WormBase:WBGene00064322" mRNA complement(join(<74246..74412,75337..75989,76665..>76891)) /gene="Cre-srh-51" /locus_tag="CRE_29645" /product="CRE-SRH-51 protein" /db_xref="WormBase:WBGene00064322" CDS complement(join(74246..74412,75337..75989,76665..76891)) /gene="Cre-srh-51" /locus_tag="CRE_29645" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR010916 (TonB box, conserved site)" /codon_start=1 /product="CRE-SRH-51 protein" /protein_id="EFP12328.1" /db_xref="InterPro:IPR003002" /db_xref="InterPro:IPR010916" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE29645" /db_xref="WormBase:WBGene00064322" /translation="MSFLKPTTLAEYYATNYSKCTETFSVFASQDFLLIGMKLEFLVI LPINMFGFYCILFKSTKYMKEFKWHLFHLQFWFLLLSIFYSILTTPIHFFPAQVRCSI GFLRERGVGPLFQVIVVHFVYAGIVSAVVLLFENRHRHLAPTTDFSYRIHKSPRILLG ILNFSVGITNTIPVVLQEETQEFLKLKYLEVLPCPMDLYFDVCSFAQSKRITGWSLLA YLTNVLVTVEIAFFITHCFFCLRKSQLVDTFSVRTKRLQVAFFKAAIAQVAAPLVVLF LPFIMLFYLLATSANLQGLINICVLFIPANSAFSTISLLYFNAAYRKFIKGLIQVPAL MEISNNRVAVASSV" gene complement(<77730..>82538) /gene="Cre-srh-49" /locus_tag="CRE_29646" /db_xref="WormBase:WBGene00064321" mRNA complement(join(<77730..77890,78489..79141,82315..>82538)) /gene="Cre-srh-49" /locus_tag="CRE_29646" /product="CRE-SRH-49 protein" /db_xref="WormBase:WBGene00064321" CDS complement(join(77730..77890,78489..79141,82315..82538)) /gene="Cre-srh-49" /locus_tag="CRE_29646" /note="contains similarity to Pfam domain PF01461 7TM chemoreceptor; contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)" /codon_start=1 /product="CRE-SRH-49 protein" /protein_id="EFP12738.1" /db_xref="InterPro:IPR003002" /db_xref="PFAM:PF01461" /db_xref="WormBase:CRE29646" /db_xref="WormBase:WBGene00064321" /translation="MSSLPTTLLEYYTTNYTKCQQSFSIFSTPEFLSVGAKSQFFVII PINLFGFYCIICKTPKYMKEFQFHLFHMQFWFLILTIFYTILTTPYHFYPAEVRCSVG LFRDLGISSRYQVYLINLVYGGIVSAVILLFENRHRHLVPSTDIFYNIKGFHRFFLGF FNFFVGSSNLWSVMLQDANQETLKLEYLKILPCPTELYFDSCSSAVERNPNIWNLGLL ITSILIPIQVIFFIIHSFMYLRKSQNINSFSKRTKKLQKAFFRAGIAQVASPISVLII PLALLIYIMGTRQYLPGLINICILFIPSHSVFSTFAIIIFNVPYRNYVKKILGIGQDN SISRVAIVSSF" gap 82082..82091 /estimated_length=10 gene complement(<82914..>85568) /gene="Cre-pnk-1" /locus_tag="CRE_29647" /db_xref="WormBase:WBGene00064320" mRNA complement(join(<82914..83003,83081..83430,84082..84257, 84307..84512,84576..84939,85337..85395,85461..>85568)) /gene="Cre-pnk-1" /locus_tag="CRE_29647" /product="CRE-PNK-1 protein" /db_xref="WormBase:WBGene00064320" CDS complement(join(82914..83003,83081..83430,84082..84257, 84307..84512,84576..84939,85337..85395,85461..85568)) /gene="Cre-pnk-1" /locus_tag="CRE_29647" /note="contains similarity to Pfam domain PF03630 Fumble; contains similarity to Interpro domains IPR004567 (Eukaryotic pantothenate kinase), IPR011602 (Fumble); coded for by the following C. remanei cDNAs: DT935477, DY526734" /codon_start=1 /product="CRE-PNK-1 protein" /protein_id="EFP12615.1" /db_xref="InterPro:IPR004567" /db_xref="InterPro:IPR011602" /db_xref="PFAM:PF03630" /db_xref="WormBase:CRE29647" /db_xref="WormBase:WBGene00064320" /translation="MGHTSVSSRRISPRGSPPNLRRTPPKIRKILVIKEKRAAETEDP VMDELLLASKLKRVDSATGCVSPRAPSTDIAPTVPPTSTTTATVPRPTQKAPKTPYVI LPACDTFEKFRKTSRVSVDIGGTLIKVVYSSVMDDELPEEKNGQKRKYAYEDGKRVLV NFKKFTDLDRLINFLREVWTDRKAGDVIHCTGGGSYKYSEIIMKELGVRLQRTDEMRS LIYGVNFLLSTNVDESFTYHHDAIGLNKFQYRPIAADLIYPFLLVNIGTGISILKVDS PTSYERVGGSSMGGGTFMGLGSLLTPAQNFDELLEMANKGDHRNVDKLVSDIYGGSYD ELKLKADLIAGSMAKCNRFGETPKKQVHKPEDIAKSLLLMVSNNIGQMAYLYGTRYNL KRIYFGGYFIRQDPITMRTLSFAINYWSRGEIEALYLKHEGYLGAMGSFLDEEGKLDD " gene complement(<86945..>91157) /locus_tag="CRE_29648" /db_xref="WormBase:WBGene00064319" mRNA complement(join(<86945..87062,88379..88544,88984..89167, 89630..89832,90060..90154,90208..90314,90368..90527, 91111..>91157)) /locus_tag="CRE_29648" /product="hypothetical protein" /db_xref="WormBase:CRE29648" /db_xref="WormBase:WBGene00064319" CDS complement(join(86945..87062,88379..88544,88984..89167, 89630..89832,90060..90154,90208..90314,90368..90527, 91111..91157)) /locus_tag="CRE_29648" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12329.1" /db_xref="WormBase:CRE29648" /db_xref="WormBase:WBGene00064319" /translation="MISDSASKDECWKSNRYSVMRYESEDDDEEGLIHEESLENLMKR RASDPLFLDFNTWKKKVGSLIQSENHVLMHSDETLRNAINDAMFLEVASDNLMKKRKM QFELLDECRKEEGSKAKKLYEENMDTLKKDYGWKFNSYSKMLTSAFERATLPFDAPDI TRPPPLQLPKMNVPPPTFFNSTVVRPTSASSSTSLVTMALARAAITPSPRVSAPLISS HLLPPPVVKNVIRDFSREDLDEKKKKEEKVEVVKPNVQETKPTAKLPVIRAFQSTSWR IPYHPVPVPPPKVYFAGIPPTPPPSLQRNTAVARRSRFTGGNERSTPSPSSDSSQSSG VVGINVRGLFVGNRQRQSSGSSPAN" gene complement(<92893..>95063) /locus_tag="CRE_29649" /db_xref="WormBase:WBGene00064317" mRNA complement(join(<92893..93438,93602..93760,94695..>95063)) /locus_tag="CRE_29649" /product="hypothetical protein" /db_xref="WormBase:CRE29649" /db_xref="WormBase:WBGene00064317" CDS complement(join(92893..93438,93602..93760,94695..95063)) /locus_tag="CRE_29649" /note="contains similarity to Interpro domains IPR016146 (Calponin-homology), IPR001715 (Calponin-like actin-binding); coded for by the following C. remanei cDNAs: DR781740, DY529245, DY525018, DT936909, DT935760, DR407586, DR776976, DT935714, DT937397" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12744.1" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR016146" /db_xref="WormBase:CRE29649" /db_xref="WormBase:WBGene00064317" /translation="MSDEIKKVDEIVAEEKAPEVPTSEPPVDTPAAPVAAEEAPKVAE EGVAAADATAAPAEGEAAATAPEEKKKSGGVARRFTFNKRWGKHRDAEAATPKEPEAP KDPKEDVLGWIAQQIPQAVHKANFQVIDWVQKTAIPEEGDRKTIPGKDQATTRNQFLG FFKDGDVLVKLANALQPGAVEVATAEENADAAAQKEVQKKNIDAFGTWAQQALGTETA PVTSDDLLEKGKAGYSAVFQTLWQLGVGAKEKFDKEGFNVDTIVQLANSVVKSGLLNT ILGFFRVRYSSSYHIITIQFFQRSRQSTAAVDEPKDDAAAAAAGEGEAAKEEGATGEV TDTADEPVAVKQETSAPAAVAAN" gene 100540..100610 /locus_tag="CRE_31991" /db_xref="WormBase:WBGene00186399" tRNA 100540..100610 /locus_tag="CRE_31991" /product="tRNA-Gln" /db_xref="WormBase:CRE31991" /db_xref="WormBase:WBGene00186399" gene <109124..>111558 /gene="Cre-twk-37" /locus_tag="CRE_29429" /db_xref="WormBase:WBGene00064316" mRNA join(<109124..109152,109695..109766,109814..110004, 110364..110458,110509..110725,110798..110963, 111080..111338,111397..>111558) /gene="Cre-twk-37" /locus_tag="CRE_29429" /product="CRE-TWK-37 protein" /db_xref="WormBase:WBGene00064316" CDS join(109124..109152,109695..109766,109814..110004, 110364..110458,110509..110725,110798..110963, 111080..111338,111397..111558) /gene="Cre-twk-37" /locus_tag="CRE_29429" /note="contains similarity to Pfam domain PF07885 Ion channel; contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR013099 (Ion transport 2)" /codon_start=1 /product="CRE-TWK-37 protein" /protein_id="EFP12494.1" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR013099" /db_xref="PFAM:PF07885" /db_xref="WormBase:CRE29429" /db_xref="WormBase:WBGene00064316" /translation="MAAYNRRLESRSPDPLRSPNPDLPLLRSNSVSSNDGTHRHTDRI INKFMERKMEKVPPETHHLVRKQSVFTFVDHAKDKSKEKPKPTNFRKTLKKIRKFNTI IAFVFLILYIGGGAALFWQIESKSDMNFEKYKEELIDKSKKLYKSLAPSKCAPLQPSD NEENNKCLKKIYDLLMDSNPSKHIRTYLDGLAYVLTCITTIGYGQLVCYTIAGKMVTV IYVIIGIALTIYVLRHNGKIALKVCNWVLGVVARCIRICGNNKLKFRMTVTKSFILLF VFWILGALGIASYEKFVFWDAIYFSFSTFSTVGFGDLVPTSHVSGAIIFTLHFIDLSL LSMVFVLVHQTMENHYMKVLELLDEGYQKYTTELNTGTTTNLQSPGGSKRNLDMITTA REKS" gene <112410..>112804 /locus_tag="CRE_29430" /db_xref="WormBase:WBGene00086131" mRNA join(<112410..112722,112773..>112804) /locus_tag="CRE_29430" /product="hypothetical protein" /db_xref="WormBase:CRE29430" /db_xref="WormBase:WBGene00086131" CDS join(112410..112722,112773..112804) /locus_tag="CRE_29430" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12562.1" /db_xref="WormBase:CRE29430" /db_xref="WormBase:WBGene00086131" /translation="MIRKTTILFLALALLATVARGADGDNVEAGDAQLPSGGAQKQGG ENKSTEEKKSTEAPKLETPAENAPKDTQPDAGSNSDAATPEAPAEGGNGTSSSGFMSY GLGASVVLLAAL" gene <113545..>114032 /locus_tag="CRE_29431" /db_xref="WormBase:WBGene00086142" mRNA join(<113545..113950,114001..>114032) /locus_tag="CRE_29431" /product="hypothetical protein" /db_xref="WormBase:CRE29431" /db_xref="WormBase:WBGene00086142" CDS join(113545..113950,114001..114032) /locus_tag="CRE_29431" /note="contains similarity to Staphylococcus aureus Fibronectin-binding protein A precursor.; SW:Q2YW62" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12637.1" /db_xref="WormBase:CRE29431" /db_xref="WormBase:WBGene00086142" /translation="MIQKTTILFMALALLAIFAHGFPTPPSGGADDANKDEDTPADTP EDTTDDNAAAGVPGTPDLPRLPQLPIPAPEAPKAPEDPKDGTSNQGGKDEEKSKSTEA PPATAESGSNTTPEAPVEGGNGTSSSAFMSYGLGASVVLLAAL" gene <115273..>115767 /locus_tag="CRE_29432" /db_xref="WormBase:WBGene00086096" mRNA join(<115273..115681,115736..>115767) /locus_tag="CRE_29432" /product="hypothetical protein" /db_xref="WormBase:CRE29432" /db_xref="WormBase:WBGene00086096" CDS join(115273..115681,115736..115767) /locus_tag="CRE_29432" /note="contains similarity to Homo sapiens Ran GTPase-activating protein 1; ENSEMBL:ENSP00000348577; coded for by the following C. remanei cDNAs: DR781177" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12311.1" /db_xref="WormBase:CRE29432" /db_xref="WormBase:WBGene00086096" /translation="MFRKNTFLFMTFALLVIISRAQVDSSDDVESTTEFDYDYDGDND EQVEVTEEPEKEEETPTEKPEEETTAEVPIEETKTTEAESTEEEKKTTPAPAPIAPRV TAAPQVADPPPAEVEDVVKIENTTSSSTFMSYGFGASVVLLAAL" gene <117672..>117960 /locus_tag="CRE_29433" /db_xref="WormBase:WBGene00086120" mRNA join(<117672..117885,117929..>117960) /locus_tag="CRE_29433" /product="hypothetical protein" /db_xref="WormBase:CRE29433" /db_xref="WormBase:WBGene00086120" CDS join(117672..117885,117929..117960) /locus_tag="CRE_29433" /note="coded for by the following C. remanei cDNAs: DY528723, DR406592" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12485.1" /db_xref="WormBase:CRE29433" /db_xref="WormBase:WBGene00086120" /translation="MIQKTTILFMALTLLAIFARGQNNVTAGGQNNTAQGPPPAAAPG PAATEVEGTGEPAGNGTSSSAYLNYGLGASFVLLAAL" gene <118423..>123359 /locus_tag="CRE_29434" /db_xref="WormBase:WBGene00064315" mRNA join(<118423..118903,119363..119505,119551..119677, 119881..120367,120770..120918,120970..121094, 121141..121253,121310..121422,121511..121784, 122817..122980,123058..>123359) /locus_tag="CRE_29434" /product="hypothetical protein" /db_xref="WormBase:CRE29434" /db_xref="WormBase:WBGene00064315" CDS join(118423..118903,119363..119505,119551..119677, 119881..120367,120770..120918,120970..121094, 121141..121253,121310..121422,121511..121784, 122817..122980,123058..123359) /locus_tag="CRE_29434" /note="contains similarity to Pfam domain PF01757 Acyltransferase family; contains similarity to Interpro domains IPR002656 (Acyltransferase 3), IPR006621 (Nose resistant to fluoxetine-4, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12632.1" /db_xref="InterPro:IPR002656" /db_xref="InterPro:IPR006621" /db_xref="PFAM:PF01757" /db_xref="WormBase:CRE29434" /db_xref="WormBase:WBGene00064315" /translation="MNICIFVSLLLASSINSLFLKDGRSTLKQLLAKENNGTLMEMLS EHFKNGRANLRNILFSEKYRLTDDNFCLDSLINIGKSALKSLTNYSSESDYEPNWAVR LLDALPAKPPGLSRKGPFFFIGDFETCKELWSVEMRQVHYCTVRGEVKIRNEISPVTT GICAPSNCHENHIIELLKLAKQHFFNETIDVKSVYCSDGSDEIWSAKKPFVLFVFFFI LALLAIGTFTEKMNREGLLKKSKTKMRRMIHKKSYRVSNNNSTTGSISEDRSSCGTET EDENESVVNSSINRTNAPSIALTYRNLSSIHLSNSLLINILSSFSIRSSLTYLFRNST RDVKLVNLFRVCSSFWVIFSHTCLFSLNFTDTIRVVAKKGETVVGWRNFMLNSSLAVD TFLFLSACVATFSIRKKLMFRGADSMFSILKCLSLLIHRCLRLLPALSLYLIFMSLVY NHLADGPFWNTNGMFGTECTPSSLWPHFSFLANFFPSMCVPWLWYISLDFQLYLTLPI IVFFVSRFRFGWIFVVFLCMAALGYRGFMFFYQSLPANMFVEMLSGNFEKAELSFKLL YTSPISRCPPFFIGILTGWYICQIRYLGTLPTVTTIGLKILAFFFLAFALFGPFFNWK YLIYPHAVMNRTIWAIGLAVLVVLAQNGYNFGIFKVFGGQALVVLSRLSFGVYLSHEP ILLYYLNSLRQPMSPSSFGYFMFITISIYSISLVCAFFIAIAIEVPLLTLERKLFMTT RRMNEDETKDRMERHVSFDDSEKVEKYVVMNENEELEVDDLNADEKTRQWIETGSLCA QRSDLDVIEKERRVRFKDPHLNTSTSC" gap 123863..124192 /estimated_length=330 gene <124791..>126754 /locus_tag="CRE_29435" /db_xref="WormBase:WBGene00064314" mRNA join(<124791..124798,124868..125340,125384..125772, 126215..>126754) /locus_tag="CRE_29435" /product="hypothetical protein" /db_xref="WormBase:CRE29435" /db_xref="WormBase:WBGene00064314" CDS join(124791..124798,124868..125340,125384..125772, 126215..126754) /locus_tag="CRE_29435" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12543.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CRE29435" /db_xref="WormBase:WBGene00064314" /translation="MSSKDKKTKKHHHHHHHGKGSVLPPKKSKKRDKTKKGAKKGKSG TGLNKTASNASLRAFDSKHKLKKHSSNDDVSTDGTPFLPTITVSDSAVNLFSEAPSAP TKFTTTARALTPMSHSPTPTAVPIMMPPVLTTPPTVQTVAAPVKWKAEDVALGYIEKM DAAMARLEYIEACASTKPLVEKDCLLWKKNLHKNQTDAYPCLDSTIVKIPNQPDDYVN MSTITVPHCRYPILMGQMPKRGFEEEFWRAVFNESVVMMYVLMGTEDEKNDFFPTTPG AYVYYGSMFVNIRLVDKMDEERTRYTIEALPNGLSNSNMINVYVHTGWEPFGVPVKYA NTTRSVVDVMNFVKTSNGSEKMMVVSKNGCGRAGYFLSLGASFCCLNDGSEPRMGEIV KALRVQRPNSVDSMKQYASLYLCLLYYIKVNIINFKIKFKEFIFQKKITIPDDKKQKV EDVTKGLEALIREDLSIIY" gene complement(<128155..>132069) /locus_tag="CRE_29650" /db_xref="WormBase:WBGene00064313" mRNA complement(join(<128155..128274,130404..130526, 130947..131042,131093..131150,131942..>132069)) /locus_tag="CRE_29650" /product="hypothetical protein" /db_xref="WormBase:CRE29650" /db_xref="WormBase:WBGene00064313" CDS complement(join(128155..128274,130404..130526, 130947..131042,131093..131150,131942..132069)) /locus_tag="CRE_29650" /note="coded for by the following C. remanei cDNAs: DR407561" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12673.1" /db_xref="WormBase:CRE29650" /db_xref="WormBase:WBGene00064313" /translation="MPSTSKLIILAIVALIGVVTSQEQQACAVNQLFNGQICTCAPGY FSSANDDSKARCDDECEEVYFSVFTTGKCVDNIFGKVPKDQQPACNLRCGIRIRLWAT IAAFVVIAAALVSLVLALPMCIASCSACLNAKKANKNAKRVALEAQNAPSKDQQVATM GYNPYAYWPYYGRA" gene complement(<135092..>135615) /locus_tag="CRE_29651" /db_xref="WormBase:WBGene00086165" mRNA complement(join(<135092..135248,135303..135416, 135470..>135615)) /locus_tag="CRE_29651" /product="hypothetical protein" /db_xref="WormBase:CRE29651" /db_xref="WormBase:WBGene00086165" CDS complement(join(135092..135248,135303..135416, 135470..135615)) /locus_tag="CRE_29651" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12740.1" /db_xref="WormBase:CRE29651" /db_xref="WormBase:WBGene00086165" /translation="MDIFSQEIIWKLKEIAGIRPIQILNLSQLWKSLRNQHRWSKSAL FLHKNLREKIQPVLHDIVDLTVEVKIKIIFCASSRLDDRLKSMVSTAEYDEGGRIQRI RIGNEMLEGSHDGKLKNSFRRAKEAEAEQQERERRQ" gene complement(<137241..>139973) /locus_tag="CRE_29652" /db_xref="WormBase:WBGene00064312" mRNA complement(join(<137241..137636,138168..138379, 138432..138576,138829..139429,139496..139617, 139768..139860,139911..>139973)) /locus_tag="CRE_29652" /product="hypothetical protein" /db_xref="WormBase:CRE29652" /db_xref="WormBase:WBGene00064312" CDS complement(join(137241..137636,138168..138379, 138432..138576,138829..139429,139496..139617, 139768..139860,139911..139973)) /locus_tag="CRE_29652" /note="contains similarity to Pfam domains PF08221 (RNA polymerase III subunit RPC82 helix-turn-helix domain), PF05645 (RNA polymerase III subunit RPC82); contains similarity to Interpro domains IPR013197 (RNA polymerase III subunit RPC82-related, helix-turn-helix), IPR008806 (RNA polymerase III Rpc82, C -terminal); coded for by the following C. remanei cDNAs: DT935056, DR776347" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12473.1" /db_xref="InterPro:IPR008806" /db_xref="InterPro:IPR013197" /db_xref="PFAM:PF05645" /db_xref="PFAM:PF08221" /db_xref="WormBase:CRE29652" /db_xref="WormBase:WBGene00064312" /translation="MGGGKYETQMCVIIVEDIFGKIVSKVLETLLNESCQLATLVYKL KGQIKTVLIKKSLSTLINFGFVTFSLDTNNRTTYVADSEHIQYMISAPRACLIAKTLY GPSAESICIELISQGRLTISETIRRIKATDETAEFSNIKHSFEELVKSNFLIRVPAVE SEIHGCPQFITSFDPFALPTAIMEKKEEKVDESTDTASTSRKRKADSTPSDADAGQYW KINWSRFNGYLRDELIIDYLIGGGSTATMTHMNHKKGEEEDGDRTQYITQNVAHLMFK MNEVRAKPLSMDSITVSITDLQRLVRENELNLSKPDIEFACQILVDESDGIVRKVGES NGGLYTVDIRHAIRQICRHHCESLIREQFEGRAIRVMRLLENRHFLDEEQVEKLSMMS GKEAREMLYALVEEGYVFNKPVGRSNDFQPARTFYLYYVDLPRTVRGLVEYTCKLVRN LVIRQRHERTENKQLLDKDANVQPIIENIRASDQLDDASKLAQIAEVEEMYLPGPDRA QLARFRKAQATLLAAQDQSIRVLLAFKLFLASGQS" gene complement(<140192..>142029) /gene="Cre-lpd-2" /locus_tag="CRE_29653" /db_xref="WormBase:WBGene00064311" mRNA complement(join(<140192..140318,140362..140677, 141477..141717,141766..>142029)) /gene="Cre-lpd-2" /locus_tag="CRE_29653" /product="CRE-LPD-2 protein" /db_xref="WormBase:WBGene00064311" CDS complement(join(140192..140318,140362..140677, 141477..141717,141766..142029)) /gene="Cre-lpd-2" /locus_tag="CRE_29653" /note="contains similarity to Pfam domain PF04000 Sas10/Utp3/C1D family; contains similarity to Interpro domain IPR007146 (Small-subunit processome, Utp3)" /codon_start=1 /product="CRE-LPD-2 protein" /protein_id="EFP12505.1" /db_xref="InterPro:IPR007146" /db_xref="PFAM:PF04000" /db_xref="WormBase:CRE29653" /db_xref="WormBase:WBGene00064311" /translation="MVETDQERFSDLVAELENASAEAVKAISKVVDRMDETKDDKEGL SLLKLKNYEMTAYLGELTVLMSKMMKGESIAADPSVKKALKHRVFIEKMKPIEDKMKP QIEKLLSKSNTQSNGVSKGNLRVRLDNMDVDGDEEEEEDEDDESGEKGAKEVKKYVAP RIRAVRYEEEDETPNKQQEKAKRRAMQSSLIMELKNQYSDAPEEIREISEKKYQYDRQ RERYEEENFTRIRQNKEQKRRSEQLGRAETLDDLLSFGDYMMRGEDGRALTEGSNRKR AASSSAAGSSKRHKKSQKERKKAAKGKKEGRKRAIRRRQ" gene complement(<142232..>142624) /locus_tag="CRE_29654" /db_xref="WormBase:WBGene00064310" mRNA complement(join(<142232..142339,142389..142476, 142527..>142624)) /locus_tag="CRE_29654" /product="hypothetical protein" /db_xref="WormBase:CRE29654" /db_xref="WormBase:WBGene00064310" CDS complement(join(142232..142339,142389..142476, 142527..142624)) /locus_tag="CRE_29654" /note="contains similarity to Pfam domain PF07716 Basic region leucine zipper; contains similarity to Interpro domains IPR011700 (Basic leucine zipper), IPR004827 (Basic-leucine zipper (bZIP) transcription factor)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12611.1" /db_xref="InterPro:IPR004827" /db_xref="InterPro:IPR011700" /db_xref="PFAM:PF07716" /db_xref="WormBase:CRE29654" /db_xref="WormBase:WBGene00064310" /translation="MSGNRKRNTSEPRDDDEDDYSTKRKRNNEAVNRTRQKKRQEEND TAEKVDELKKENEALERKVEQLQKELSFLKEMFMAYAKNDGNDGPPPPPAAAV" gap 142760..142847 /estimated_length=88 gene complement(<144405..>148735) /gene="Cre-cof-2" /locus_tag="CRE_29655" /db_xref="WormBase:WBGene00064309" mRNA complement(join(<144405..144611,144657..145086, 145142..145239,145292..145389,145437..145560, 146938..147030,148179..148581,148659..>148735)) /gene="Cre-cof-2" /locus_tag="CRE_29655" /product="CRE-COF-2 protein" /db_xref="WormBase:WBGene00064309" CDS complement(join(144405..144611,144657..145086, 145142..145239,145292..145389,145437..145560, 146938..147030,148179..148581,148659..148735)) /gene="Cre-cof-2" /locus_tag="CRE_29655" /note="contains similarity to Pfam domains PF02191 (Olfactomedin-like domain), PF01391 (Collagen triple helix repeat (20 copies)); contains similarity to Interpro domains IPR003112 (Olfactomedin-like), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-COF-2 protein" /protein_id="EFP12724.1" /db_xref="InterPro:IPR003112" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF02191" /db_xref="WormBase:CRE29655" /db_xref="WormBase:WBGene00064309" /translation="MDEKLHYCNLAITLLSVLAFSHIHYRIYILESECKSLSDTTNFR SKRDVPVVSRGKNASDTLWLTSLSSVKIGELMHKCTEIHEYCSEQDDVRGKPGPVGPV GPPGKLGPPGPQGRRGLMGVPGHPGPVGPPGNIGKDADCSSCPVRDELLMEREFKCPT IENLECPNKDAIPTTPWPSITHQPMSGLVQQILTNYSEVEGCVKICLKNYTLDEEVEE TITTPVAYIQGVTAHCRLQNVGKPVFHSHSTTYYGSWMRDAYPPTGDDARKRYVMNHF QGHELIEFRNEAEMRREHVGKVHRLPYIFDGTNHVIFNASLFYQRAGYPIIAKYEFNS KQYSQFEIPGAAYRGDQVTLNCYFQNFSHKFLILKSFQYLYNNSMNYFDLAIDENALW VMFHYKEEHFLSVAKVDINNLTIYETFNLTMVNHTDVANGIVVCGTIYLVESAAEQST YISSAYDFYRNTYSQPLIKWINLYKNANMISYNAYDKRIYIYDHGYMLSVPPLLHWLA K" gap 146316..146325 /estimated_length=10 gene <150403..>151832 /locus_tag="CRE_29436" /db_xref="WormBase:WBGene00064308" mRNA join(<150403..151074,151256..151485,151547..>151832) /locus_tag="CRE_29436" /product="hypothetical protein" /db_xref="WormBase:CRE29436" /db_xref="WormBase:WBGene00064308" CDS join(150403..151074,151256..151485,151547..151832) /locus_tag="CRE_29436" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12529.1" /db_xref="WormBase:CRE29436" /db_xref="WormBase:WBGene00064308" /translation="MTKKPIELSDLPPETLQLLVEKCNFVTRFDIFPILSFFTSTKIS RRRLRASSSLMYQVVNSTKLYIPSVRMTLWNKAVIVELTPEKSKDDHIVLFMKNHKGE TRMESDFRKEVLVENSDPMDAAIDWFRQMCLQKNVTIGQFHLGNVKKLTEKLEEVLGK SEIRLKIRSILCSETESEDLMWKVMDYCDKSLLKEMKVETANTDAVFELFGTQDEIVK NLEKIEIDSLCNVSNEDVLSLNASVISLKSENFTDDLVYKLIEKFTNRREDGSAFCIE NSQKENLDLEMIPPGFEETNSTNEYKEYRNQLIDTNHPTVYLRVSDDRVLLHIGETKK AKYWNEEESDSETSDDSDSSPGWESDYNAYDHGVYIDVGNDEYASDPEFHGYHPNHDY SWD" gene <152103..>154085 /locus_tag="CRE_29437" /db_xref="WormBase:WBGene00064307" mRNA join(<152103..152185,152425..152968,153545..153780, 153827..>154085) /locus_tag="CRE_29437" /product="hypothetical protein" /db_xref="WormBase:CRE29437" /db_xref="WormBase:WBGene00064307" CDS join(152103..152185,152425..152968,153545..153780, 153827..154085) /locus_tag="CRE_29437" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12396.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29437" /db_xref="WormBase:WBGene00064307" /translation="MTKKSIRLSDLPPEMLRLLVEKCDFITRRRLRASSSLMYQLVNS TKLYIPIVKMTLWNEKTVVVELTFEPKFGGYHTLLFEKNQKGETRMESDEREPVVIGN ADPMDAAIDWFRQMCLQKNVTIGQLHLGNVNKLTEKLFGVLEKSEFPLKIKSIYCTRI KSADLMWKVMDYCDKSLLKEMKVRTWNPNKIFELFGKQDEIVKNFKKIEIECFCNVSD EDVLSLNASIIFLKFENFTDDLVYKLIEKFTNRREDGSAFCIENSSKRKLNLKIIPPG FKIKKTTIKNGCKEFRNQLIDTSHPTVYLSVSEDRVLLQIGYTKKVNLWKKAEYNHDT SDEPDSSSDSVDPDDSYEESFDQDFDEDDEDDDYDDDFY" gene <154475..>155957 /locus_tag="CRE_29438" /db_xref="WormBase:WBGene00064306" mRNA join(<154475..154557,154659..155205,155398..155627, 155678..>155957) /locus_tag="CRE_29438" /product="hypothetical protein" /db_xref="WormBase:CRE29438" /db_xref="WormBase:WBGene00064306" CDS join(154475..154557,154659..155205,155398..155627, 155678..155957) /locus_tag="CRE_29438" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12692.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29438" /db_xref="WormBase:WBGene00064306" /translation="MTKKPIELSDLPPEMMRLLVEKCDFLTRRRLRASSSLMYQVVNS TKLYIPLVKMTLWNGEVVVELRVDSNQDDYILHFEKNETGGTRILSDFREDVLIENSD PVDEAVDWFRQMCLQKNVTIGLFYLETYADSKKLTEKLGGVLGKSEIRLKIKSIHCVG AKSIDLMWKVMDCCDKSLLKKMKVNTAIEDNIFELFGKQDEIVKNLEKIEIECLCNVS DEDVLSLNASVISLKSENFTVDLVNKLIEKFTNRREDGSAFCIKNSQKRNLNLEMIPP GFKETNSTNEYKEYRNQHIHTNHPTVYLRVSDDRVRLQIGDTKIANFWIEYESDSETS DDSDSTPDWDMGYDAYEDDFDQNYDDYENAFDQDYDYFDDDFFWD" gene <156603..>157426 /locus_tag="CRE_29439" /db_xref="WormBase:WBGene00086119" mRNA join(<156603..156695,156900..157129,157180..>157426) /locus_tag="CRE_29439" /product="hypothetical protein" /db_xref="WormBase:CRE29439" /db_xref="WormBase:WBGene00086119" CDS join(156603..156695,156900..157129,157180..157426) /locus_tag="CRE_29439" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12477.1" /db_xref="WormBase:CRE29439" /db_xref="WormBase:WBGene00086119" /translation="MKVETVYEDEDEIFELFGKQDDIVKNLEKIEIECLCNVSDEDVL SLNASVISLNSRNFTVDLVYKLIEKFTNRREDGSAFCIENSSKRNLNLKIIPPGFEET DSSRGYKEYRNQLINTNHPTVYLRVSEDRVRLQIGDTKKAKFWNENESDSDTNDDSDS SFGWASDYDAYEDAFDQDYHDYDYDFFWG" gene <158535..>161209 /locus_tag="CRE_29440" /db_xref="WormBase:WBGene00064305" mRNA join(<158535..158617,158809..159382,159801..160030, 160081..160360,161087..>161209) /locus_tag="CRE_29440" /product="hypothetical protein" /db_xref="WormBase:CRE29440" /db_xref="WormBase:WBGene00064305" CDS join(158535..158617,158809..159382,159801..160030, 160081..160360,161087..161209) /locus_tag="CRE_29440" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12530.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29440" /db_xref="WormBase:WBGene00064305" /translation="MTETSIELSDLPPEILHLLVEKCDFVTRRRLRASSTLLYQIVES TKLYIPSVKIKELYEGVLVKLFKDDYTLQFEKAETSGTRMESDFRKEVLIENSDPMDE GIDWFRQMCHQKNVTIGKLQIESIFNSKKLTEKLDEVLGKSEIPLKIKSILCLGKKSD DSMWKVMEHCDKSLLKEMKEGSVFEDVIIDISNAFGSFGNHFELFGKQDEVVKNLEKI KIECLCNVSDEDVLSLNASVISLNSRNFTVDLVYKLIEKFTNRREDGSAFCIENWSKR NLDLEMIPPGFEKTDSTDEYKEYRNQLINTNHPTVYLRVSEDRVRLQIGDTKKVKFWN KDGRMYSGENYYDSNYYKFPTLRRMAFGASNLFKMVSKRKTLFAFIFRPAKLENRILT MEITTPFKLFELKPKARDRILLLMDPIHLYVSHFLSI" gap 162106..162124 /estimated_length=19 gene <162855..>164052 /locus_tag="CRE_29441" /db_xref="WormBase:WBGene00064304" mRNA join(<162855..163582,163842..>164052) /locus_tag="CRE_29441" /product="hypothetical protein" /db_xref="WormBase:CRE29441" /db_xref="WormBase:WBGene00064304" CDS join(162855..163582,163842..164052) /locus_tag="CRE_29441" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2); coded for by the following C. remanei cDNAs: DT936577" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12377.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE29441" /db_xref="WormBase:WBGene00064304" /translation="MEEKFIGEKNVDLVFGDHKVPCIFKKYVKPEKGDTGSFDQLFHS SEMKRPFHRQVILTYWNYELFDAVLDLADYFSEVFATPITELITSRTMSVWKFRRAIQ WLISRQSSIKRIDYLHNELSDADISMFFGNCNVTERLTICMKDNDRIRHHRYFDLDTL KISMASWVTIDYLLDMDCIFFRISGANMTSFDCNRFIKSWLNGTNHRLEIISMNCGQI LERDDVLDGLETRHRSGYLVERFKNHKVGGSTFEFCIRGGFDVQREDGKLATVDTSMM DRGLFLFVVWTEDDISEGFKRQESEGTDGDVGCTLL" gene <164313..>165062 /gene="Cre-spp-15" /locus_tag="CRE_29442" /db_xref="WormBase:WBGene00064303" mRNA join(<164313..164486,164874..>165062) /gene="Cre-spp-15" /locus_tag="CRE_29442" /product="CRE-SPP-15 protein" /db_xref="WormBase:WBGene00064303" CDS join(164313..164486,164874..165062) /gene="Cre-spp-15" /locus_tag="CRE_29442" /note="contains similarity to Pfam domains PF03489 (Saposin-like type B, region 2), PF05184 (Saposin-like type B, region 1); contains similarity to Interpro domains IPR008138 (Saposin-like type B, 2), IPR011001 (Saposin-like), IPR007856 (Saposin-like type B, 1), IPR008139 (Saposin B)" /codon_start=1 /product="CRE-SPP-15 protein" /protein_id="EFP12653.1" /db_xref="InterPro:IPR007856" /db_xref="InterPro:IPR008138" /db_xref="InterPro:IPR008139" /db_xref="InterPro:IPR011001" /db_xref="PFAM:PF03489" /db_xref="PFAM:PF05184" /db_xref="WormBase:CRE29442" /db_xref="WormBase:WBGene00064303" /translation="MKPINRFILALSFILFVISAVESSKKLHTETSKPLCGLCVNIVK QLDQVLEHGGDIEAAVDKFCKEDVPSFMVDMCEKVIEKNLEYIIEKLKDHEEAGKICT DIFLCRTPKQYYFLETEK" gene complement(<165231..>167935) /locus_tag="CRE_29656" /db_xref="WormBase:WBGene00086158" mRNA complement(join(<165231..165377,165437..166042, 166161..166319,166687..167253,167623..167751, 167819..>167935)) /locus_tag="CRE_29656" /product="hypothetical protein" /db_xref="WormBase:CRE29656" /db_xref="WormBase:WBGene00086158" CDS complement(join(165231..165377,165437..166042, 166161..166319,166687..167253,167623..167751, 167819..167935)) /locus_tag="CRE_29656" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PNG5" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12709.1" /db_xref="WormBase:CRE29656" /db_xref="WormBase:WBGene00086158" /translation="MIEIGTEPRAGTLEWLDNERNRVSWTELRTSFHLLYRHTATDSL SDSLIFHVYAARESTRRASRIRISVDIQIKNPPDPDVQVILFPESVSILNSGSTPLLA DMLMTRHKTVPPQSIVYSTQQRGANGVTIRRGDDEIDQFSQQEVNDGKISIWHTANRH QPTATWHDVIVLDIEGHTRSLIVDIRPLDLMLKNHSTIWYPQGKTYVVLNSEHLGAFS MGNRSSLKYKITSGPENGTFYWVAGEKEAKEFSQKDIDDGRVLYAQLNMHSYQDKFDF VVENDSRDVLRNSSELKVRALVTVQPVIVEADTATPLTTSQINASTLLNASPRFFLTS PLKYGRLTFDPNTNYSTYYFTYTDIQKGIVYYKAFSTDEEVHEIVQLEVRADNVQPAR FTMPITILRADMESYDLTPSGDSNGTPFSNGGSGLPKFSILGENSLPVVILGAIVAAT MFVLICRRCGDGKKKNKSRTPISTKLDTPTRLPPSPSESIDHEKPPDLLGTTVFASVR QAEDRMTMKSFNKPPKPESASSRKPPNPRRQNVSSLDYAGISSDTPPPMRLFEQVAQT QPTNHYWV" gene <168149..>168790 /locus_tag="CRE_29443" /db_xref="WormBase:WBGene00064301" mRNA <168149..>168790 /locus_tag="CRE_29443" /product="hypothetical protein" /db_xref="WormBase:CRE29443" /db_xref="WormBase:WBGene00064301" CDS 168149..168790 /locus_tag="CRE_29443" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12349.1" /db_xref="WormBase:CRE29443" /db_xref="WormBase:WBGene00064301" /translation="MQNSKTTSSESSERHHNKKPDAFKLELSTTVFVVPTKGTLHIEV KNIAKKVQEVLITLESAIFTIQNFQKEVYPTQQVSMILNPMETKSFTISVRDHFPEPF TFEKNQLKNPEGELTISHCDTTKKTGKVELDVGENGLMILGVEKNEKLRWGMFSHNIM MDNATRELKEQKERYLRERKEFEDRKSGKSSKESGSEKEKDVFECCGISCVIA" gene complement(<170293..>183554) /locus_tag="CRE_29657" /db_xref="WormBase:WBGene00064300" mRNA complement(join(<170293..170503,171419..171546, 171590..171820,172059..172193,172757..172825, 172879..172958,173004..173159,173215..173395, 174083..174261,174309..174498,175005..175231, 175283..175410,175458..175681,176170..176487, 176539..176616,176995..177393,177880..178090, 178179..178313,178826..179172,179219..179359, 179643..179741,179784..179850,180952..181036, 183260..>183554)) /locus_tag="CRE_29657" /product="hypothetical protein" /db_xref="WormBase:CRE29657" /db_xref="WormBase:WBGene00064300" CDS complement(join(170293..170503,171419..171546, 171590..171820,172059..172193,172757..172825, 172879..172958,173004..173159,173215..173395, 174083..174261,174309..174498,175005..175231, 175283..175410,175458..175681,176170..176487, 176539..176616,176995..177393,177880..178090, 178179..178313,178826..179172,179219..179359, 179643..179741,179784..179850,180952..181036, 183260..183554)) /locus_tag="CRE_29657" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PNG5" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12419.1" /db_xref="WormBase:CRE29657" /db_xref="WormBase:WBGene00064300" /translation="MTFLALISLITSPLTFDLQINGPSSNPAPIILTTPSKNLSLSVH DGHIYADSIPVSAITENETTSFSLKCISHISLHFQSPHANSLVYSPTLCSAPNIGLTI NDTALKGCMFDITQSNSIMTQRICGIDSKNAAKNPEKGPIYVAEPVELNEGGSMPLQW KNVYFMPSSQEVNVSHTDIFFTIVESAKHGEIRIDDVVTSSFTYAQLLARRVIYKHDG TESREDRLSFQIEFAVKHKELASAESKTYTLRIKINGVNDAPELVKRSKDEKLLIASK GSRVITNEILLLTDADDRPEKVRVQVVESNGVHIEVHGQKVNEFSHKQLIEEMVSLVD EGTDLGSGRIRLIARDGEARSGVVILETQSTKVDVKLVHNTGLKLLHHSNALITNRNL SFEASIKDMIVAYRIVDMPDTGVVECLQENDDKFSMCTTFTQSQVNEEQVRFRHTSQS SSPSDMFSFQVEAGEFASMVHVFRIDFIPMNIKVFTREPFVLNGTEIMWISRPNLFSW TFPKSFSAHNLVYHIDEPPKLGTLSRKLSAGKQRRIGVSSNFTQQDIDEGSISYKLHY QQYSIVNDFFVFRVVSPAVSSPLLRFDIVYVPKESSIRLVNKTIVVKEGEIASITSDF LSLSTPDDSNFIFRVVSPTLHGQIRLQIGEILKKDSNFTSDDISKHRLTYSHSGDETR SDECRLLAISRQNPMRQVPLTLSFSIILLNDNAPKLAQNVTVYMVERGERVLHPFLLP WIDEDVDASALLFDFTQNKDAAILSTVSPYLPLTSFTQHDIDEGKVMIRHLGHHGEFY IGYTVSDGAHRVEGKMHVLAAKPDVWIEKSEIVMICGAHFPQTIRLSSNNLTVLTNLD VRLEDIVYSSNTSRFSVGSQRKSARGFSQREIENESVWYSVPNENAVEKLRVAVADRN LEVELRVRCENSRDSFTYQQHRMLRVPVGGAVLIDKTLLEIAMIDAEPPVIYQVVKHP NFGYLSLDYEKSYSSRVSRFTDSDVSSGSVQYVHNNADHSNDSIDFQVLIISRNLSFH LKLDIDVFQRNITISTSLFSVPAGGRAPITTNFLKVSTSENEEAAITVVSPPTSGWVT TDSVHNITSISSIGTFTTRMIENGQVWFISDGSQGNDSIGVQACVQDQCTGTHLMQIT VTRINEKGPVMIRNEVLRVTGNKALITNSHLDVEDTDTPTNSITYIIAQPSNGRVVKT GHIEEVISNFTQFDIDQSNVAFLATNHSNSFGGFSFHVTDGKHKIGPEWFSTELSSSS NILEANGRLVASPSSATVIGTELLRANMPGTRPDEIVFTILKPARFGEVLVDGIKNSV FTQLQINRRQVVYSAVGYSDQNEWSRRDSFSFRVHKNNSAQFLNTNEKFRITTTYAAI SDKVLSKYITTRPLIVSRGGSACFNQSHLDVSALADAVDKEVSLGIVDHRKEQFCVFS D" gene <184307..>186298 /locus_tag="CRE_29444" /db_xref="WormBase:WBGene00064299" mRNA join(<184307..184354,184399..184746,184909..185079, 185128..185327,185415..185766,185813..>186298) /locus_tag="CRE_29444" /product="hypothetical protein" /db_xref="WormBase:CRE29444" /db_xref="WormBase:WBGene00064299" CDS join(184307..184354,184399..184746,184909..185079, 185128..185327,185415..185766,185813..186298) /locus_tag="CRE_29444" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12399.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE29444" /db_xref="WormBase:WBGene00064299" /translation="MASEEKPPSLKIDMTVPIRNKWHPVTVLGSGAFGKVMHVVNIND GSDAAIKLEKSGEGKDSILKIEVEVMRAMAGVKCAIQLLDNGSEPDYRFVVMTLCGMD LQKVYNGLKGKFSDSTILRLAIRSLLAVKALHEKCYIHRDLKPCNVTLDYNEESPIIF LIDFGMGRQFGMFHEDFSKKFVIRHPRDSCRFRGTYRYCSPRMHLRREQGRVDDLWAW LYMIVELRVELPWADVVNPDRIEVLKQDRFDAALNSNPLTKALDPIHQHLKTLDYACR PNYWMMYEHLAKMMVDIKAKHTDPMDYDDLRKKKSEMDPIKKKYMKKPRSMEKLMDEK STLTMFEEAFRPNVKDVPGGDQFIVKALLKLPWGSVGADQVNAQKEEGVGDTEDEKKK EKDNESNEDKKKELEKKKEEEKKIEVRSKSKKEKEKKTERSKEFREPKDSKDQKKRHN THTAREPHTHGKGSDVKSKEIKDTEQRTNRSSDKLKKTKTTGHHRKKEKGKKEKPESS TNSKKRVGSHGLLPVTPTATVPRKKG" gene complement(<186580..>187768) /locus_tag="CRE_29658" /db_xref="WormBase:WBGene00064298" mRNA complement(join(<186580..186694,186771..187322, 187375..187602,187683..>187768)) /locus_tag="CRE_29658" /product="hypothetical protein" /db_xref="WormBase:CRE29658" /db_xref="WormBase:WBGene00064298" CDS complement(join(186580..186694,186771..187322, 187375..187602,187683..187768)) /locus_tag="CRE_29658" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12514.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE29658" /db_xref="WormBase:WBGene00064298" /translation="MNSSSSFPLFALPHLMQGLCFKQMDGFDLICWTLGNKIATEAVS LHKYSTPDLHVTITWDSGRFNSQFYHFNENGKVVGMWNIQSKNKKRPRNMKHIGADSV VIHTYPSSSITDIHSSNPISTTTALMDHFKKIYRKVNYSIRFEGVDLGEHALYKWKHL SEASKIELIDSNVYPHHIQEFQSMLRPHQELLIERGSVELENCPKVKKITINASKYFT ANKFNNYDCEQLEVRGYTINHNDYVEFLTEWMGGSHKNLKTFTLFDADKGWLIYRLKP FKYEGEVKTFHESDSGLIDCSEGYYIMRNDGTLGTLVFNENGVMQFVVWL" gene <188654..>189268 /locus_tag="CRE_29445" /db_xref="WormBase:WBGene00064297" mRNA join(<188654..188739,188820..189047,189100..>189268) /locus_tag="CRE_29445" /product="hypothetical protein" /db_xref="WormBase:CRE29445" /db_xref="WormBase:WBGene00064297" CDS join(188654..188739,188820..189047,189100..189268) /locus_tag="CRE_29445" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12588.1" /db_xref="WormBase:CRE29445" /db_xref="WormBase:WBGene00064297" /translation="MNSSSSFPLFALPQLMQGLCFKQMDGFDLICWTLGNKIATEAVS LHKYSTPDLHVTITWDSGRFNSQFYHFNENGKVVGMWNIQSKNKKRPRNMKHIGADSV VIHTYPSSSITDIHSSNPISTTTALMDHFKKIYRKVNYSIRFEASTWENMPCTMETSQ " gap 189330..190022 /estimated_length=693 gene <190191..>190500 /locus_tag="CRE_29446" /db_xref="WormBase:WBGene00086115" mRNA join(<190191..190309,190386..>190500) /locus_tag="CRE_29446" /product="hypothetical protein" /db_xref="WormBase:CRE29446" /db_xref="WormBase:WBGene00086115" CDS join(190191..190309,190386..190500) /locus_tag="CRE_29446" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12445.1" /db_xref="WormBase:CRE29446" /db_xref="WormBase:WBGene00086115" /translation="MGGSHKNLKTFTLFDADKGWLIYRLKPFKYEGEVKTFHESDSGL IDCSEGYYIMRNDGTLGTLVFNENGVMQFVVWL" gene <191250..>192384 /gene="Cre-col-56" /locus_tag="CRE_29447" /db_xref="WormBase:WBGene00064296" mRNA join(<191250..191396,191445..191512,191573..192143, 192190..>192384) /gene="Cre-col-56" /locus_tag="CRE_29447" /product="CRE-COL-56 protein" /db_xref="WormBase:WBGene00064296" CDS join(191250..191396,191445..191512,191573..192143, 192190..192384) /gene="Cre-col-56" /locus_tag="CRE_29447" /note="contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies); contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-COL-56 protein" /protein_id="EFP12417.1" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR008161" /db_xref="PFAM:PF01391" /db_xref="WormBase:CRE29447" /db_xref="WormBase:WBGene00064296" /translation="MKQGSWLAIRVFFAVIVTVLVFIFCAFFYFIVQIQDIQKISEEA IRDFENYEKTTWNDIQILMISLNSREKRKSRKKTRRQTDYLVPFPSPYAASPSIKPPD CPSGPPGLPGKPGINGEPGIDGLPGRDYNYMELITRDCILCPVGPPGEPGIEGSEGIQ GPPGLIGQPGENGESGIMGAVGDAGREGSPGEQGEDGVMGPPGLIVMKMLNTRGPKGE NGSRGLTGQPGMPGRIVKALPGSTGVKGKPGMNGLTGKPGATGKVGMPGEPGLDASYC PCPNRSYDMQKMVSPAPEKKYSYDYYEFEATKAKRNKKSPWKLRRIRYTR" gene <192840..>193445 /gene="Cre-rps-17" /locus_tag="CRE_29448" /db_xref="WormBase:WBGene00064295" mRNA join(<192840..192994,193044..193224,193389..>193445) /gene="Cre-rps-17" /locus_tag="CRE_29448" /product="CRE-RPS-17 protein" /db_xref="WormBase:WBGene00064295" CDS join(192840..192994,193044..193224,193389..193445) /gene="Cre-rps-17" /locus_tag="CRE_29448" /note="contains similarity to Pfam domain PF00833 Ribosomal S17; contains similarity to Interpro domain IPR001210 (Ribosomal protein S17e); coded for by the following C. remanei cDNAs: DR406534, DY527879, DY529565, DY529674, DR406549, DR406515, DT935376, DR778805" /codon_start=1 /product="CRE-RPS-17 protein" /protein_id="EFP12702.1" /db_xref="InterPro:IPR001210" /db_xref="PFAM:PF00833" /db_xref="WormBase:CRE29448" /db_xref="WormBase:WBGene00064295" /translation="MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSK PLRNKIAGYITHLMRRIERGPVRGISIKLQEEERERRDNYMPEISTVDPSQLVSIKVD SDTNDMLKAAGFNLPNVTVEDQGKNKGK" gene <194157..>196719 /locus_tag="CRE_29449" /db_xref="WormBase:WBGene00086140" mRNA join(<194157..194366,194426..194767,194817..195014, 195071..195281,195334..195440,195485..195783, 195830..196237,196283..196460,196507..196594, 196640..>196719) /locus_tag="CRE_29449" /product="hypothetical protein" /db_xref="WormBase:CRE29449" /db_xref="WormBase:WBGene00086140" CDS join(194157..194366,194426..194767,194817..195014, 195071..195281,195334..195440,195485..195783, 195830..196237,196283..196460,196507..196594, 196640..196719) /locus_tag="CRE_29449" /note="contains similarity to Pfam domains PF00571 (CBS domain pair), PF01595 (Domain of unknown function DUF21); contains similarity to Interpro domains IPR000644 (Cystathionine beta-synthase, core), IPR002550 (Protein of unknown function DUF21)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12626.1" /db_xref="InterPro:IPR000644" /db_xref="InterPro:IPR002550" /db_xref="PFAM:PF00571" /db_xref="PFAM:PF01595" /db_xref="WormBase:CRE29449" /db_xref="WormBase:WBGene00086140" /translation="MLALRISFTIIIHLIWSTFQAPTDINLAGVRLDSSGDLEVTPNQ SFAIRVLGNNIPRGGDFYFTTATTCEDAYLPNNDKISTVPVVSLHSACSFAVLEVRDG LPFNVSSSTYHLCYKGFNAYTEEFLNIKSTDPTTQKFGLDSVIVCCFCILMSAYAAGM TLGYMKFSIVELNNLIKQVDASLAKKARRILVVRRQSNYLVTSFSLFSSIFTVLFTTN VEKLLNGAPNEAVLKIVVPALISLIFAEVIPQAICNSKFGFDLASGLWFVSYFIFVVT FPIAYPVSRVLGRFLKRDVREVLTEEEKTCMIQNMAKNANEKVKTILENATTFANKKV GELMVPIDEVFMLSRSQKLNRSTILTLVEKGYTRIPVYHDKNKNTIVGLLNMKDLRLV AGDLGREPTVREVLLQLETLKEKNKKAKFVAKYVNVEMNAQLLLNQMRTGDFHFACVV KYTSYESKVIGIITIEDILEELFGKIDENNQRRVRSSVDDRADNAVIGWCREAGTDKN YPLSFSQQLRVLQYLLEECQVLKSLEIGYLKCRQILAVERIRIAKKDEVLSVEKVLLV IWKGKVSVTNDSGSFDQEIKVPSAKSTSKDQDEKTVKPNVPVLIAGKEIMNSLMIRLG SPFREIINETEYTRKIVALSEVHYFKVLRIEDLLNAINGSVQAKKTDFVQPADSLIQR LNSRQTTSTHTPKTRTPPRTGQQM" gene complement(<196912..>200424) /locus_tag="CRE_29659" /db_xref="WormBase:WBGene00064294" mRNA complement(join(<196912..197388,197435..198087, 198140..198302,198349..198428,198478..198591, 198640..198846,198893..199010,199059..199313, 199360..199479,199942..200055,200143..>200424)) /locus_tag="CRE_29659" /product="hypothetical protein" /db_xref="WormBase:CRE29659" /db_xref="WormBase:WBGene00064294" CDS complement(join(196912..197388,197435..198087, 198140..198302,198349..198428,198478..198591, 198640..198846,198893..199010,199059..199313, 199360..199479,199942..200055,200143..200424)) /locus_tag="CRE_29659" /note="contains similarity to Pfam domains PF00641 (Zn-finger in Ran binding protein and others), PF01585 (G-patch domain), PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)); contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000467 (D111/G-patch), IPR001876 (Zinc finger, RanBP2-type), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12616.1" /db_xref="InterPro:IPR000467" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR001876" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="PFAM:PF00641" /db_xref="PFAM:PF01585" /db_xref="WormBase:CRE29659" /db_xref="WormBase:WBGene00064294" /translation="MHHLSFKTVQFYRISIDRLLDSHLLPQQNRLKCCKPLSPVEKKG VLVPHHGLETHAVLVQRAVSVALEEAEVDQDPADEVVVTDEMNGAVVEEEIIREVVRR HRPPMVRRTARHPTVTADDDDQEAPVEIGWDRNYRRNNHSNNDRYSEWNPGTPCNKLA IMNMPNDVDNTKITLSLGNYGYLPQDVRTMTKFDKVTNKIRTFAFVEFSSQETAEKWM ADYQGYLTLDDGRTLTVEYAKGDPAAGSGNKSDDWICAHCSMNNFVKRHTCFKCEISR EQSMELERVGAHMVGIIPCDTLLMRGLPDGITNNLIFDSLGALVCLSSISMIKLSDSK RFAYIQMKSTDEAKMLLNLTFKTAIKIKDKEVQISWCRDSMSKLIQQQMTMLTTNPGK NSVAGNAAQGNMTGAEIAAAAMSKAHAVRQASHQVGQIMTGLPVPAASMIPPNFNVPP PNMSMPPPMQPAQPEHQNGVIGTVQTPKGLLHKYLPPNPLTFVHDPNVGYYIDPITKF CYDQATGYYFNNATAQWCTWDLTYQTYFPVETPAPTAAESEAPEEEKRKKSEDGVPKT AQDLVKDMAKWAKKQEKDKKKVQISLKGKDTKGIELKNVFSQEKQRKLAPSVLEEDEE EEQEVKEEVRSRASEEPSTSSSFNSTPLAPKKPSLREVQEAMERALYDEAKKTCILCK RAFSDVEILRKHVEKSDLHRKNLEAKRAEWGRETAAKLKEEEEEATPDLGKIVYRDRA KERRRQFGLDSTGYAFDVMGGQPGSSSSGRSEDAIRRESEEASKRPLDDSNIGNRLLK SMGWKEGQGVGKHGQGIVNPIQAERFVQGAGLGAAGSKMRHGAEATHKEKTRQALYSR YHDT" gene complement(<200568..>200954) /locus_tag="CRE_29660" /db_xref="WormBase:WBGene00086123" mRNA complement(join(<200568..200678,200749..200817, 200898..>200954)) /locus_tag="CRE_29660" /product="hypothetical protein" /db_xref="WormBase:CRE29660" /db_xref="WormBase:WBGene00086123" CDS complement(join(200568..200678,200749..200817, 200898..200954)) /locus_tag="CRE_29660" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12506.1" /db_xref="WormBase:CRE29660" /db_xref="WormBase:WBGene00086123" /translation="MLPFVFNADDDGKRVQNEERGYDPSDHQRQMEDYYKQYEEQRVV NSYHNTSGRSDLAAIQARLAQTEQAIQRLNQETE" gene <201609..>203935 /gene="Cre-fars-1" /locus_tag="CRE_29450" /db_xref="WormBase:WBGene00064293" mRNA join(<201609..201664,201765..201875,201967..202467, 202516..202608,202654..202898,202946..203130, 203471..>203935) /gene="Cre-fars-1" /locus_tag="CRE_29450" /product="CRE-FARS-1 protein" /db_xref="WormBase:WBGene00064293" CDS join(201609..201664,201765..201875,201967..202467, 202516..202608,202654..202898,202946..203130, 203471..203935) /gene="Cre-fars-1" /locus_tag="CRE_29450" /note="contains similarity to Pfam domain PF01409 tRNA synthetases class II core domain (F); contains similarity to Interpro domains IPR006195 (Aminoacyl-tRNA synthetase, class II), IPR004529 (Phenylalanyl-tRNA synthetase, class IIc, alpha subunit), IPR002319 (Phenylalanyl-tRNA synthetase, class IIc); coded for by the following C. remanei cDNAs: DT933430, DT935547, DY524767" /codon_start=1 /product="CRE-FARS-1 protein" /protein_id="EFP12526.1" /db_xref="InterPro:IPR002319" /db_xref="InterPro:IPR004529" /db_xref="InterPro:IPR006195" /db_xref="PFAM:PF01409" /db_xref="WormBase:CRE29450" /db_xref="WormBase:WBGene00064293" /translation="MSDPNRLNQILQDQPYIEGFAQPSSVDFSTRASINPNDLKGREH LERWFHHLSSFEMTADTSVRSTENLPQQILDFLGKSNEFNSIQLAQQWDIDHQKLIGA IKSLLANEGVLATKDVTEKRLELTNEGVQFANEGSPEFLVFEFIGADGAAQADIQKQP FGKIGMAKAMQFKWVSVDKGRVVRQTSDVADTTRKQLESLRIGGDVDENGKKELKKRK LISEVNIKGLLVSKGDSFTTSLAKQEADLTPEMIASGSWKDKQFKKYNFESLGVVPSS GHLHPLMKVRSEFRQIFFSMGFSEMATNRYVESSFWNFDALFQPQQHPARDAHDTFFV SDPAISTTFPQDYLERVKTVHSKGGYGSAGYNYDWKIEEAQKNVLRTHTTAVSARQLY QLAQEGFRPSKLFSIDRVFRNETLDATHLAEFHQVEGVIAEKNLSLAHLIGVFTEFFK KLGITNLRFKPTYNPYTEPSMEIFAYHQGLAKWVEIGNSGMFRPEMLLPMGLPADVNV AGYGLSLERPTMIKYGINNIRDLFGSKIDLEVVYNTPICRLDK" gene 203248..203326 /locus_tag="CRE_32506" /pseudo /db_xref="WormBase:WBGene00186914" tRNA 203248..203326 /locus_tag="CRE_32506" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CRE32506" /db_xref="WormBase:WBGene00186914" gene <204184..>204711 /locus_tag="CRE_29451" /db_xref="WormBase:WBGene00064292" mRNA join(<204184..204321,204370..>204711) /locus_tag="CRE_29451" /product="hypothetical protein" /db_xref="WormBase:CRE29451" /db_xref="WormBase:WBGene00064292" CDS join(204184..204321,204370..204711) /locus_tag="CRE_29451" /note="contains similarity to Brugia malayi RE49852p, putative.; TR:A8PS18; coded for by the following C. remanei cDNAs: DY529428" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12434.1" /db_xref="WormBase:CRE29451" /db_xref="WormBase:WBGene00064292" /translation="MTTRLARLWQPGNPQRRVFLPDFWLAVVESPDVGRNKLPRNCVK FEVDPRMSRHDIREYLTKIYDLPVRDVRTEVQMGDITWNSKHDHQYKKAMWKDDDKKF AYVFMSKGFTFSYPKMFDSLEEDLELIKAKQQQEDLKDKLNEGYANRNRRVGRFLAV" gap 206108..206117 /estimated_length=10 gene <206860..>209324 /locus_tag="CRE_29452" /db_xref="WormBase:WBGene00064291" mRNA join(<206860..207069,207121..207861,207909..208409, 208458..208981,209033..>209324) /locus_tag="CRE_29452" /product="hypothetical protein" /db_xref="WormBase:CRE29452" /db_xref="WormBase:WBGene00064291" CDS join(206860..207069,207121..207861,207909..208409, 208458..208981,209033..209324) /locus_tag="CRE_29452" /note="contains similarity to Pfam domains PF00725 (3-hydroxyacyl-CoA dehydrogenase, C-terminal domain) (2), PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain), PF00378 (Enoyl-CoA hydratase/isomerase family); contains similarity to Interpro domains IPR006108 (3-hydroxyacyl-CoA dehydrogenase, C-terminal), IPR012803 (Fatty acid oxidation complex, alpha subunit, mitochondrial), IPR013328 (Dehydrogenase, multihelical), IPR006176 (3-hydroxyacyl-CoA dehydrogenase, NAD binding), IPR001753 (Crotonase, core), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DR409163, DY527276, DT934227, DR408600, DT933219, DR778550, DR409318" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12360.1" /db_xref="InterPro:IPR001753" /db_xref="InterPro:IPR006108" /db_xref="InterPro:IPR006176" /db_xref="InterPro:IPR012803" /db_xref="InterPro:IPR013328" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00378" /db_xref="PFAM:PF00725" /db_xref="PFAM:PF02737" /db_xref="WormBase:CRE29452" /db_xref="WormBase:WBGene00064291" /translation="MLSRLVRQSSSTLRTNISFRLFSQSSPAMASTVRVEKQGDVAVV KIDLPNTKENVLNKALSSDMKATFEKLQADESVKSIVVMSGKPNSFVAGADIQMLKAE KSAAGIEALSRDGQEQFFRIEKSQKPVVAAIMGSCMGGGLELALACHYRIAVNDKKTQ LAVPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDHVIQPLG DGLGPAAENTHKYLEEVAVKTAKDLADGKLKVNRDKGFVHKATQMVMTNSLFLDNVVL KMAKDKLMKLTAGNYPAPLKILEVVRTAYVDPKNGYEAEAKAFGELSQTFQSKALIGL FDGSTDAKKNKYGQGLPVKEIAVVGAGLMGAGIANVTIDKGVRTVLLDANPAGVERGQ NQILTHLNGQMKRRKINKLEKERIYNHLVPTIDYAAMKNADVVIEAVFEDLQLKHKVI KQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHEGT SKETLATAAQLGLKQGKLVVVVKDCPGFFVVRCLGPMMSEVVRLLQEGVSPTELDKLT TKFGFPVGAATLADEVGLDVAEHVAQFLGKALGPRVRGGSADLLSELVNAGYKGRKTG KGIFEYGDGKKGSKKINDEATKLLQKYKLTPNATVSSPEDRQLRLVSRFVNEALLCLE EGVLASPSDGDIASVFGIGFPPFWGGPFRFVDLYGAEKLVSSMEKFAGAYEAAQFAPC QLLKDHAKSGKKFYN" gene <209809..>211035 /locus_tag="CRE_29453" /db_xref="WormBase:WBGene00064290" mRNA join(<209809..209847,209895..210014,210217..210891, 210943..>211035) /locus_tag="CRE_29453" /product="hypothetical protein" /db_xref="WormBase:CRE29453" /db_xref="WormBase:WBGene00064290" CDS join(209809..209847,209895..210014,210217..210891, 210943..211035) /locus_tag="CRE_29453" /note="contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core); coded for by the following C. remanei cDNAs: DR782427" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12629.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="WormBase:CRE29453" /db_xref="WormBase:WBGene00064290" /translation="MAAELIQLNPGQQVERWSIEKKLGEGGFGAVYRVFDSTGKYAMK VEGCNEQIQVLKLEVSVLNELSKRGNRHFCKIEDKGRFGNFNYVVMTLVGKSLQDLNK AGPGGHMTMGCSIGIGIQALESLEDLHNIGYLHRDVKPGNYTIGRPELNEIRKVYILD FGMCRKFTGNDGTIRKPRQAAGFRGTVKYAPISCHLQRELCRKDDLETWMYMQVELSY GNLPWGHLSDMNQVGQAKQGIRTNLGQLFPPPCPQQFQDIMRMVDQMKYYDAPNYQAL YGMMRSAYAAVGSSESAPYDWENGGPAAYLLH" gene complement(<211356..>215263) /locus_tag="CRE_29661" /db_xref="WormBase:WBGene00064289" mRNA complement(join(<211356..211424,211933..212184, 212234..212320,213152..213493,213577..213874, 214075..214180,214229..214335,215166..>215263)) /locus_tag="CRE_29661" /product="hypothetical protein" /db_xref="WormBase:CRE29661" /db_xref="WormBase:WBGene00064289" CDS complement(join(211356..211424,211933..212184, 212234..212320,213152..213493,213577..213874, 214075..214180,214229..214335,215166..215263)) /locus_tag="CRE_29661" /note="contains similarity to Pfam domains PF08840 (BAAT / Acyl-CoA thioester hydrolase C terminal), PF04775 (Acyl-CoA thioester hydrolase / Bile acid-CoA amino acid N-acetyltransferase); contains similarity to Interpro domains IPR006862 (Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase), IPR014940 (BAAT/Acyl-CoA thioester hydrolase C-terminal), IPR016662 (Acyl-CoA thioesterase, long chain); coded for by the following C. remanei cDNAs: DT935380" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12381.1" /db_xref="InterPro:IPR006862" /db_xref="InterPro:IPR014940" /db_xref="InterPro:IPR016662" /db_xref="PFAM:PF04775" /db_xref="PFAM:PF08840" /db_xref="WormBase:CRE29661" /db_xref="WormBase:WBGene00064289" /translation="MLHVDKVDSHQAEKIHITADGLEEWRCYTFVLRLHYDRGTYASF CVIQSDSLGIIDFARDAPVRGMYHDVDPMGLFLSLEPTQSVRPGHFFKTYDPNTFYYT LQLLNDSEEKIDEINLKKHWKHPLVAQINVAENGLYGALFKPPGPGPFPCVVFIPGSN GMLESGYAAVLASEGFVTFTFAYYAYKKELPKSIPEVDIEFFGRPIEFVQNLPYCNGK IGLIGQSFGGLTANYLSTKYHQVSAVVALNCSAAFCRDSAVMRENGKPMDTQLLDEGM SDFVNGVLVQRPAFKNLYSKLTPTTSIPWWRASKDTAYRIVQCYDDMLVDGVPSRDNI CQNLRDTGHQVESELVPGGHFLYFPYFPHHGIIFNAQINLMWGFGGECYQHSKSQETT WTKNIEFFRKHLGGGAVIPDWDREKKVVLPERKEKKSSLSFFDSGFRTPNFEILVSDV GF" gene <216349..>217376 /locus_tag="CRE_29454" /db_xref="WormBase:WBGene00064288" mRNA join(<216349..216486,216532..216732,216807..>217376) /locus_tag="CRE_29454" /product="hypothetical protein" /db_xref="WormBase:CRE29454" /db_xref="WormBase:WBGene00064288" CDS join(216349..216486,216532..216732,216807..217376) /locus_tag="CRE_29454" /note="contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies)) (3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12482.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF01484" /db_xref="WormBase:CRE29454" /db_xref="WormBase:WBGene00064288" /translation="MTKTLVTVASVGSGVAVIACLFTVGYIFNDINSFYDEVMDTMTE FKFNENQAWNSMVKPSDMFGRIKREVNKRQAQCNCGAQSNGCPAGPPGPPGQPGAQGE SGHPGVAGKPRPDLRGLQXXXXGVMESTSGIVTGPGPCITCPAGAPGPAGSPGAPGAP GPAGAPGQDSYGGGPGPAGPAGPAGDAGAPGQPGAPGAPGNAGRSGQRSRGLPGPSGA PGPQGPAGGPGQPGQSGGAGAPGQAGAPGAPGQPGQAGAPGTPGAPGNSGSPGGDAAY CPCPARSVAVRKHRKVFRKRVAKVSV" gap 216828..216837 /estimated_length=10 gene complement(<217720..>218121) /locus_tag="CRE_29662" /db_xref="WormBase:WBGene00086162" mRNA complement(<217720..>218121) /locus_tag="CRE_29662" /product="hypothetical protein" /db_xref="WormBase:CRE29662" /db_xref="WormBase:WBGene00086162" CDS complement(217720..218121) /locus_tag="CRE_29662" /note="contains similarity to Homo sapiens 52 kDa protein; VG:OTTHUMP00000024537" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12726.1" /db_xref="WormBase:CRE29662" /db_xref="WormBase:WBGene00086162" /translation="MRTPALFVMLLLVFIATATAQESGGNDKPATPEPTDKETTQKKI EEKPKETEPKDKPNEKDSSKTPPVDTPRNGDEKGSGSENSEGGTGVEEGAGSEGGAEG VPEGPEEAAVTSASNIVGGLLGVAAVLTYLF" gene complement(<218562..>219479) /locus_tag="CRE_29663" /db_xref="WormBase:WBGene00064286" mRNA complement(join(<218562..219296,219342..>219479)) /locus_tag="CRE_29663" /product="hypothetical protein" /db_xref="WormBase:CRE29663" /db_xref="WormBase:WBGene00064286" CDS complement(join(218562..219296,219342..219479)) /locus_tag="CRE_29663" /note="contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies)) (3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat); coded for by the following C. remanei cDNAs: DR409012" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12532.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF01484" /db_xref="WormBase:CRE29663" /db_xref="WormBase:WBGene00064286" /translation="MTKTLVTVASVGSGVAVIACLFTVGYIFNDINSFYDEVMDTMTE FKFNENQAWNSMVKPSDMFGRIKREVNKRQAQCNCGAQSNGCPAGPPGPPGQPGAQGE SGHPGVAGKPGANGVTIGIVTGPGPCITCPAGAPGPAGSPGAPGAPGPAGAPGQDSYG GGPGPAGPAGPAGDAGAPGQPGAPGAPGNAGRSGQRSRGLPGPSGAPGPQGPAGGPGQ PGQSGGAGAPGQAGAPGAPGQPGQAGAPGTPGAPGNSGSPGGDAAYCPCPARSVAVRK HRKVFRKRVAKVSV" gene <223623..>225710 /locus_tag="CRE_29455" /db_xref="WormBase:WBGene00064285" mRNA join(<223623..223680,224336..224424,225185..225599, 225652..>225710) /locus_tag="CRE_29455" /product="hypothetical protein" /db_xref="WormBase:CRE29455" /db_xref="WormBase:WBGene00064285" CDS join(223623..223680,224336..224424,225185..225599, 225652..225710) /locus_tag="CRE_29455" /note="coded for by the following C. remanei cDNAs: DY526858" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12428.1" /db_xref="WormBase:CRE29455" /db_xref="WormBase:WBGene00064285" /translation="MDFDPHSIKWKCCCCSLPSGMSLLASVEFAFCAITGSITMYNII HQKPEDLTAFEVCLVGLMLFFGLTCIMLIIGVQKHAHQLIYPSLLARGLTTLFLAVFG VSTVFASSKSPHTAIEHHQWRHNEGKYAHDEPNMALRLVLFVFAMLFLTVIIFYCSYL VVRLIHYEQAYARLKERRSSLIQAGMIDPDFPSPNNYSASRRASSA" gene complement(<225889..>228637) /locus_tag="CRE_29664" /db_xref="WormBase:WBGene00064283" mRNA complement(join(<225889..226237,226373..226476, 226569..226726,226774..226937,226985..227283, 227465..228097,228212..>228637)) /locus_tag="CRE_29664" /product="hypothetical protein" /db_xref="WormBase:CRE29664" /db_xref="WormBase:WBGene00064283" CDS complement(join(225889..226237,226373..226476, 226569..226726,226774..226937,226985..227283, 227465..228097,228212..228637)) /locus_tag="CRE_29664" /note="contains similarity to Mus musculus Strumpellin.; SW:Q8C2E7" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12510.1" /db_xref="WormBase:CRE29664" /db_xref="WormBase:WBGene00064283" /translation="MVHFDQHLQQITSYNRSLKWLFLHSRPSQKTTRPLKTRPLTDDQ LFQWLLDVSRCEILLLNLYTATLENREDEGSKRQQKIRTLLNQLADFFEHGFVKMSDT QKTNFVKWVRNLSETVEKIDLKNTDESIETVQQIIRRVKQVGDLLGLSINMTLKECLT TLDSELRALLSVLSLSDSIVPDVYSKMESTYLWPLISQLIPRIQQNLVSTSNTDVVRQ IFTKLSISCWILKLKLSYFSDKDNVANRIANTYSYSLEKHLKTVLQSVPQHIFGIMYR VIMPGLGKTFEPYIEKTEVWGFSSSFSVFIVLFQLRDIAEFVTNSRLVETTSLLANTS MGISRMMLTRVGTIEINPKELLEEGMIRQLYKEIKKMMSGPSAASSIENLIKTCENIE TMRASFSYICDYMNLDGERIWSVAMDDYFSRISEERAFAKSSGDLEQNDIADLFIRIT NPKASRYSEGSMSWKDLKMSKTLLSFDVFDRIEKIVPFYILTSIETNVTVELEKILID YVSTARKLGVTFNLQSSVSHENAYQFFAGPNYERLVKAIQPQAVALATVLAQIGQLVM LLKMICNSKQLANRHKEDSIQRDLIEINKSMARDPTNLPSEMDTILKLMMQYSLYNPE RMIFRLKDEPSPLFMIALVQCVLPKIGDPYFVCPAQLEVGIRLVLRQSRLLPYFLPII QEQLPQSTRPKKRFSDVDRFLRQLILNL" gene <228941..>230373 /locus_tag="CRE_29456" /db_xref="WormBase:WBGene00064284" mRNA join(<228941..228959,229005..229067,229114..229178, 229235..229350,229395..229824,229859..230071, 230115..230249,230317..>230373) /locus_tag="CRE_29456" /product="hypothetical protein" /db_xref="WormBase:CRE29456" /db_xref="WormBase:WBGene00064284" CDS join(228941..228959,229005..229067,229114..229178, 229235..229350,229395..229824,229859..230071, 230115..230249,230317..230373) /locus_tag="CRE_29456" /note="contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase; contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12733.1" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006186" /db_xref="PFAM:PF00149" /db_xref="WormBase:CRE29456" /db_xref="WormBase:WBGene00064284" /translation="MPSNNDSPDQSDRKKKGAKDRKASAEDLYSLKSCRSSMTYDNTL IDEIQARIGYNVLMKLFECGRGGEKTLTSVVQAAEITTLLDCLKLVFLAQPSCIEIDG PINICGDTHGQFSDVLRLFDKSGYPHRANYLFLGDYVDRGRHGLENILMLFCYKLIFP NHFFLLRGNHECPSINKVYGFYEECSKRYEKGGIKVWEEFQDTFSTMPLTAIVGQRIL CMHGGISPRVRTILNTLDKLRLFQRPNYQPSHDQIEIDILWSDPSNTAKGWSPNQRGV SYTFSPDALKKILNPLSIDLVVRAHQVVQDGYEFFAQRRLVTVFSAPFYCGQFDNAAA VMSISENLVCSFQILRPKKYFPKRRIQLSST" gene complement(<230612..>231478) /locus_tag="CRE_29665" /db_xref="WormBase:WBGene00086146" mRNA complement(join(<230612..230813,230884..231059, 231104..>231478)) /locus_tag="CRE_29665" /product="hypothetical protein" /db_xref="WormBase:CRE29665" /db_xref="WormBase:WBGene00086146" CDS complement(join(230612..230813,230884..231059, 231104..231478)) /locus_tag="CRE_29665" /note="contains similarity to Brugia malayi Protein KIAA0196, putative.; TR:A8Q3D8" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12657.1" /db_xref="WormBase:CRE29665" /db_xref="WormBase:WBGene00086146" /translation="MTDETNMFLSKLVLHGESILAEIFRLSSFVPKDFKDPTKSTKFR SIVQLDFKYLSKKEQIEKELEKDLRLQSLFYSTFEPVLIAFEQLFSSISEFVQTFSSY ALEIQTIQSGDRMHNVNRTSELEAYCLYISGLLIIYLDTYLPAPIRERIYVAIYRKSD ERVNAEFLVDFLKATVPGNDSMIRRIPLPDSFIRSILHTIEVMEASSLQTPRAHLMYV ALQFDRQLLTNDVAKMTKIVNSIFRETWVRLV" gene complement(<231827..>234176) /locus_tag="CRE_29666" /db_xref="WormBase:WBGene00064282" mRNA complement(join(<231827..232987,233043..233283, 233330..233483,233584..233899,233959..234041, 234089..>234176)) /locus_tag="CRE_29666" /product="hypothetical protein" /db_xref="WormBase:CRE29666" /db_xref="WormBase:WBGene00064282" CDS complement(join(231827..232987,233043..233283, 233330..233483,233584..233899,233959..234041, 234089..234176)) /locus_tag="CRE_29666" /note="contains similarity to Pfam domain PF04188 Mannosyltransferase (PIG-V)); contains similarity to Interpro domain IPR007315 (Mannosyltransferase, PIG-V); coded for by the following C. remanei cDNAs: DR778336" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12644.1" /db_xref="InterPro:IPR007315" /db_xref="PFAM:PF04188" /db_xref="WormBase:CRE29666" /db_xref="WormBase:WBGene00064282" /translation="MPRHQIKRDNRAAVEEEIEELEERMATYDETVLEDDENVGFNFR KILNFPVPNKINELEAIDDDAFSARKTAFFTERPIGRQEESTSEVQSSDDEDEEASSE SGTEEEKRDKYDWKFWECFWFCFRQLFFSRIWIIILQFIAANYAGERFRTDAFNLADR IIEPGQSLLGDVVVRRGLLGLRRWDAQQFLFIADNHYIFEHSLAFFPGYPEVINIFRL GIQQYTLSTVGWSFPSWVLTGILSFGINMFFFHAAGMALFMVVTMITRNVKQGLLAVT VFAYNPASIFFTSAYSESMFFTLTITGFNFMLYSIRSSSYSQKMFGVMTGTFIFGLSL VVRSNGMLNAFFVAWYWCAALLWEPEKPVPDCHLLIESLAGTKNERYRREGQTRLRAF EKKRKQPRKVFRWTAPEHSRCTLVIFTILLGLFVLFIFFGPYVFMANSVAEEFCEADP HQKELVANVKRHIRMSPKIITIVDAWEKTTWCKKPRILGLVRQYYTDIQAKYWNVGLF GYWKIRKIPCFLMMLPAAILTVLAIQSAWKDVFEKKRWNNIWILTIRSDHTLHLAVHA TVMLLTGIFVINAEVFTRLMFSSSPLLYIFIARYIDELTQGVSQIFIITQKFNKLFQN TPGNRFWHYTSTPGILPFFVFRRVWDDGWRGKALYIYIFGYFILGTMAHAAWLPFT" gene complement(<234377..>235519) /locus_tag="CRE_29667" /db_xref="WormBase:WBGene00064281" mRNA complement(join(<234377..234467,234551..234758, 234807..235116,235163..>235519)) /locus_tag="CRE_29667" /product="hypothetical protein" /db_xref="WormBase:CRE29667" /db_xref="WormBase:WBGene00064281" CDS complement(join(234377..234467,234551..234758, 234807..235116,235163..235519)) /locus_tag="CRE_29667" /note="coded for by the following C. remanei cDNAs: DY528424, DR777503" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12490.1" /db_xref="WormBase:CRE29667" /db_xref="WormBase:WBGene00064281" /translation="MVQTRKSFGNPNPTTLDRNVRQKRRSLEISTSLTYQKVYPDLIE TTSYATTIQTTEQQDDDDVYETENDDSFASSQCSDRSYLSDNDTWKYGLAVIGVILAI VFGVWITGIGSNGKQSSVAATSYQNYIDSIRPVLDSPKFSSISKDNRVLLKLIGRKVF LEPENLAPLVVLVGGKTAKEFCEAVNQVVQKAKSETPAGTGNKSIRVESDTNRAELHE NLREILGPSLSSQSSPRSAVVLDVDLLKWDAVLVLHAFADHENYPVPKAVLFLTVSDD SSIDTTEESCDEKMVRFLTSRWIENGGSSDNIPPIIARISYFICV" gene <235750..>236742 /gene="Cre-chn-1" /locus_tag="CRE_29457" /db_xref="WormBase:WBGene00064280" mRNA join(<235750..235808,235860..235950,235999..236373, 236415..236627,236680..>236742) /gene="Cre-chn-1" /locus_tag="CRE_29457" /product="CRE-CHN-1 protein" /db_xref="WormBase:WBGene00064280" CDS join(235750..235808,235860..235950,235999..236373, 236415..236627,236680..236742) /gene="Cre-chn-1" /locus_tag="CRE_29457" /note="contains similarity to Pfam domains PF00515 (Tetratricopeptide repeat) (3), PF04564 (U-box domain); contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR003613 (U box), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR001440 (Tetratricopeptide TPR-1), IPR013026 (Tetratricopeptide region); coded for by the following C. remanei cDNAs: DR780810, DY528365" /codon_start=1 /product="CRE-CHN-1 protein" /protein_id="EFP12728.1" /db_xref="InterPro:IPR001440" /db_xref="InterPro:IPR003613" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00515" /db_xref="PFAM:PF04564" /db_xref="WormBase:CRE29457" /db_xref="WormBase:WBGene00064280" /translation="MATAAEQHNTNGKKCYMNKRYDDAVEHYSKAIKVNPLPKYYQNR AMCYYQLNNLKMTEEDCKRALELSPNEVKPLYFLGSVFMKSKKFNEAINCLSKALYHN AVITNAADIENALKRARHQKYEEEESKRIIQDVEFHTYLESLIDKDRQENADNPEGLQ RADMAKKRLTEITTATQEKRQNREIPEMLCGKITLELMKEPVIVPSGITYDREEIVQH LRRIGHFDPVTRKPLTESEIIPNYALKEVIEKFLDDNPWAKYEPGAMD" gene <237254..>239611 /locus_tag="CRE_29458" /db_xref="WormBase:WBGene00064279" mRNA join(<237254..237335,237389..237477,237526..237603, 237662..237892,237942..238005,238457..238520, 238569..238654,238705..238797,238846..238940, 238987..239058,239220..239423,239492..>239611) /locus_tag="CRE_29458" /product="hypothetical protein" /db_xref="WormBase:CRE29458" /db_xref="WormBase:WBGene00064279" CDS join(237254..237335,237389..237477,237526..237603, 237662..237892,237942..238005,238457..238520, 238569..238654,238705..238797,238846..238940, 238987..239058,239220..239423,239492..239611) /locus_tag="CRE_29458" /note="contains similarity to Pfam domain PF04280 Tim44-like domain; contains similarity to Interpro domains IPR007379 (Mitochondrial import inner membrane translocase, subunit Tim44), IPR017303 (Import inner membrane translocase, TIM44 subunit, mitochondria), IPR005682 (Mitochondrial import inner membrane translocase, subunit Tim44, subtype)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12316.1" /db_xref="InterPro:IPR005682" /db_xref="InterPro:IPR007379" /db_xref="InterPro:IPR017303" /db_xref="PFAM:PF04280" /db_xref="WormBase:CRE29458" /db_xref="WormBase:WBGene00064279" /translation="MLTRICGNGIRLTRTRLQFQPSLVTFRDYSNPAPKKGFLNNLMD NVRDEMQKNKELQEHQQQLKARMQELNDSDALKDARKKFELVEKETLKSSEIVKQKVE ELSEQMKKMIQEIQKTEAGKKMTEAGEEALKQARKAAEQMEKVAEKVGDTEVYKQVST SMKTVKDEIDSIADVRMYSRPDTLTKRTDGFDLDKDRVVEANDDATDVTLHKDSKWYT GWKNFSESNTYYHKLLDWKIKYEESDNIAVRMMRGVTEKIGSVFSGQNEVSEVLTEIH KIDANFDKQEWLRFCETKIIPNILEAFIRFDIEVLQSWCHERAFTQLSTVVKEYQKMH WSTKDSRIIDINKVEMATGKMMEQGPVLIISFQVYMINVTKNAEGKVVEGDPDNPKRI NHIWVLCRDVEEYNPATAWKLLEVHMQETPLAL" gene complement(<239866..>241808) /locus_tag="CRE_29668" /db_xref="WormBase:WBGene00064278" mRNA complement(join(<239866..240064,240109..240242, 241293..241417,241463..241599,241786..>241808)) /locus_tag="CRE_29668" /product="hypothetical protein" /db_xref="WormBase:CRE29668" /db_xref="WormBase:WBGene00064278" CDS complement(join(239866..240064,240109..240242, 241293..241417,241463..241599,241786..241808)) /locus_tag="CRE_29668" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12387.1" /db_xref="WormBase:CRE29668" /db_xref="WormBase:WBGene00064278" /translation="MSDDSDNSSIINECELFVVESESFERTFQDDHPENSAPKSLIFN AGSPVNRAESLEQLREYVMSLENTGEEKKEGATRMKQGCFMGFLTKVQVEKKVRIPGQ FATYYLIDELFDSLKPPKDSNISLNLFVCYLNTCHRYHHYPIVKKLESDSSRIFFQLA HFDYTKPANEPIFTSIKRLLKHYTQFVYVDSITETGGLGVEVFPK" gene 243607..243678 /locus_tag="CRE_32382" /db_xref="WormBase:WBGene00186790" tRNA 243607..243678 /locus_tag="CRE_32382" /product="tRNA-Pro" /db_xref="WormBase:CRE32382" /db_xref="WormBase:WBGene00186790" gene complement(<248888..>249845) /locus_tag="CRE_29669" /db_xref="WormBase:WBGene00086111" mRNA complement(join(<248888..249167,249222..249468, 249539..>249845)) /locus_tag="CRE_29669" /product="hypothetical protein" /db_xref="WormBase:CRE29669" /db_xref="WormBase:WBGene00086111" CDS complement(join(248888..249167,249222..249468, 249539..249845)) /locus_tag="CRE_29669" /note="contains similarity to Pfam domain PF07735 F-box associated; contains similarity to Interpro domain IPR012885 (F-box associated type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12398.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CRE29669" /db_xref="WormBase:WBGene00086111" /translation="MLSLCSKVSQSKCKLMKPAKPLRLKVHIGIGVKLTVSFENPRPE TESVKKNPEWKPLYVDDFVNPYPFTIAHEFSYLTSGGWLSNNYNSKTDRTTSKYWISK VFHWEIHEKVMKWIDTRRSSIDKLSVHCCEPLKSLQNILKYSKPKKEFNIKCEVFNPG WWVSEDTKNTHVVSSMHFNSLLKLNCPIIDSKCTAFTDEELNFFLKNWKKGYINVEFL SVAQTSSSSDIDEKTVIEELDVVKLDRALFMKPRGEIVLFRGYSIQNDQGKKALFEFK K" gene complement(<250952..>256935) /locus_tag="CRE_29670" /db_xref="WormBase:WBGene00064277" mRNA complement(join(<250952..251119,251663..251901, 251953..252084,252371..253049,253816..254190, 254252..254440,254488..254716,254766..254887, 256586..256751,256802..>256935)) /locus_tag="CRE_29670" /product="hypothetical protein" /db_xref="WormBase:CRE29670" /db_xref="WormBase:WBGene00064277" CDS complement(join(250952..251119,251663..251901, 251953..252084,252371..253049,253816..254190, 254252..254440,254488..254716,254766..254887, 256586..256751,256802..256935)) /locus_tag="CRE_29670" /note="contains similarity to Pfam domains PF02886 (LBP / BPI / CETP family, C-terminal domain), PF01273 (LBP / BPI / CETP family, N-terminal domain); contains similarity to Interpro domains IPR001124 (Lipid-binding serum glycoprotein), IPR008162 (Inorganic pyrophosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12351.1" /db_xref="InterPro:IPR001124" /db_xref="InterPro:IPR008162" /db_xref="PFAM:PF01273" /db_xref="PFAM:PF02886" /db_xref="WormBase:CRE29670" /db_xref="WormBase:WBGene00064277" /translation="MLKLISICLLIGTVRSGGQSGGYAGGQQGGAIQSVQGAGGSFAS GPDFNPILLQGQRGYPGIRARLNSRAFQYASTLVAGLLNSEIKKARIPPISQCIPMVQ GCVNIYNLYVSRYRCPQRVVLYPAPPNRIVLQVQNVDLGVTGNLGGQVVVLLPIALSG IVQLNIHQATITVQLAIERGPRGPYVRLLSCDMQIGYADAYIENGGLVGDIVNSQFRS QISNQVRQMIPGQVCGQLPNIINEKLNSKLGALPQTIALQQMISLFGGALGLGGSGGG GGGNCPSTCPKAPVFIPSTNPQPTQVAPSSLPATPIVGGAAPAPQIPTTAYTEGTRKA AAVRTLQQLQALRYPRSTNITQHLVLPQGIGRQRMYAATIRAAGVGQYQSQGQVATYS NVGANPRYPPPPTVAGGPVAVQPPPDCSKCSAAGGSGDDPASFLRQIAGHLDMSKLND LYLSLQYMQSYATSNDYTIDLTGEFSPYGQGGTPFGPFPTQFPYYGGQMAEFIVTDYT VNSLFYWLHRKQFLSFRIGPETPKIGELLKTTCSEDDDELDGGTVELDEEEARRRRRL AKEKAKYRLRRGVHSNSTIVVSVRPSRHVATHITDPEIIGATNETTRLRSKRMRDSRR RRQEDTAGLADLGICFGDILPAVREKYPNKKIAVQIRTVRAPSVILSSAKGGMVTLDL IADADIYIDQTNTKVGTITIAATVVLTARIGGGRLSGTAEITQLHLSDRTGSLGLPQD ALDNLGNLGKELLQKVANDGLQKGIAISIPQNLPLPIGIINPDVHIVEHGLHIATDFT ISPSLLGGGGGC" gene complement(<263959..>266963) /locus_tag="CRE_29671" /db_xref="WormBase:WBGene00064276" mRNA complement(join(<263959..264807,265338..265472, 265520..265883,266200..266410,266747..>266963)) /locus_tag="CRE_29671" /product="hypothetical protein" /db_xref="WormBase:CRE29671" /db_xref="WormBase:WBGene00064276" CDS complement(join(263959..264807,265338..265472, 265520..265883,266200..266410,266747..266963)) /locus_tag="CRE_29671" /note="contains similarity to Pfam domain PF00907 T-box; contains similarity to Interpro domain IPR001699 (Transcription factor, T-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12730.1" /db_xref="InterPro:IPR001699" /db_xref="PFAM:PF00907" /db_xref="WormBase:CRE29671" /db_xref="WormBase:WBGene00064276" /translation="MYSIPNEFNNHPPTSGAPPQYAPPTMSSQQFDPLWSNNHQMMQS AEQYGSQSNFSQTQYGDYLAQAPMNQQNNLPNTVMPTPSSFNYPVPQIPQMAQQLPVP QPVAENNEPPSREITVKLEKPEIWNEFHKLGNEMLVLPAGRLIFPRLNYTIEGLNPNC QYSVGLKLRRVNKYYMEFNKKKTPIEWKESAKLVVEVPEESNEVFVDSRIGSHFMENG IDCSMVNINSIGRKTAEEGTDQTKEVEGEESKKKVYRKRVPTKEKKMLVSSLCRYLPV LRIYSVDPGSSSVELLKEFSFEETQFVVTTIIKNDAVTRLKTKHNKYARGDYKVSVFK TSDAKPATPPTLDTTTDSSGYSSMDSTIASTSSISPTPRGQKRSFSSEEEKRVSDTRT KRQKESRLEEYEVPISHCPSAQEPENLQNYNRYDSSSYGSSEASSSAAPYKPAKKPPA LNDATNCLTNDNRGSVLPPQQYPGQPSTSQMHTFSDYSAASNEQYGHFPQYSANPTSS NNVQNHYAYTQTPYQQPWEPSSSQPHPYQYGHPTQFSSMAPTPFDQTAHSSTATPSSQ QQTPYSYNQWNSGDLDFGMNSNYRF" gap 270021..270238 /estimated_length=218 gene <271282..>273137 /locus_tag="CRE_29459" /db_xref="WormBase:WBGene00064275" mRNA join(<271282..271390,271463..271664,272008..272113, 272195..272309,272356..272462,272779..273002, 273047..>273137) /locus_tag="CRE_29459" /product="hypothetical protein" /db_xref="WormBase:CRE29459" /db_xref="WormBase:WBGene00064275" CDS join(271282..271390,271463..271664,272008..272113, 272195..272309,272356..272462,272779..273002, 273047..273137) /locus_tag="CRE_29459" /note="contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316); contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12491.1" /db_xref="InterPro:IPR005514" /db_xref="PFAM:PF03761" /db_xref="WormBase:CRE29459" /db_xref="WormBase:WBGene00064275" /translation="MLKLIIFFAVVSFIFCGKLSEEFDEERAGMCGKALTPEKPSKNP ADDKAPWTVGVNFGDYFSSGILVSPRHVLAPGLYAVNQPSPKIWKWIDDVKVDMSECN DNQMKIPKKTLKGFSVVLSLCQDPEQCGTRIKRLVVEGYYLGNCVNSEVPFGMILLEI SSNVPQDEPFFTPVCIPAEEKPVFIGDTVHFDSFKTVKDGQSEEIHIISDSANIEKCG ASVGRFVQSVCGKRSVCNKARNGALVKKIENRDTVIAIIWQRDDTCKTEHYVSVGFFK DKLCDLAGICKATYTAEESSASSIQFVFFGFFIILGSFAIL" gene <273616..>276161 /locus_tag="CRE_29460" /db_xref="WormBase:WBGene00064274" mRNA join(<273616..273727,273770..273971,274020..274120, 274322..274634,274687..274817,274860..275055, 275120..275394,275459..275553,275625..275937, 275998..>276161) /locus_tag="CRE_29460" /product="hypothetical protein" /db_xref="WormBase:CRE29460" /db_xref="WormBase:WBGene00064274" CDS join(273616..273727,273770..273971,274020..274120, 274322..274634,274687..274817,274860..275055, 275120..275394,275459..275553,275625..275937, 275998..276161) /locus_tag="CRE_29460" /note="contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316); contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12487.1" /db_xref="InterPro:IPR005514" /db_xref="PFAM:PF03761" /db_xref="WormBase:CRE29460" /db_xref="WormBase:WBGene00064274" /translation="MRLLILLVGCLLSFGFSQKLSTAEDEERSKTCGRIPNQNAKTND ELSPWTVRIQIKDKHFNPATLVSKRHILSSGSIVIGKVANEEKWKWSMNGEEIDMANC KDNKMEVPTELLTVDLVACSNHFLCPWRPEVPIRSVESDISIAIDEQLTSHKAHIDNN QNIVIEMLPTTIIACSTPSDHLFCGELSKCPEGSTSPLIKRVDGVDTVVGFSVYYNDE CKKKTFASVMHYKQQLCDLTGICQKTSPGPYAPKQIPPPTEISLSNKFIKLTKSEDVA NTESCGKPTNPGSSLPIDLTPWTVNVNTPNDNGYIYNPATLISKRHVVVAAFALFQDK PAKYFDGTAVDLSKCQNNVMEISTEIIKKTSVDLSTCNDASKCGSQVSKQVKSVIRSL SLSLSLEKIAPLQAVYFGVCEPEVRAFGVVLLEMDSDLPAELPYFVPSCIPEKKVPEV DDSLHLHSIGQDENKQYTRRISMAQTGKCTKGYRMYCQICATQTDCNEHSNGGFSRTQ NGREVLIGVMYYHDSTCKVEDLVSMEVLSELFCLYAGICNTKLVLRPWGSRDSKLVSL IVCLSARCSSWFFEVLTTQQDRKTEEKIRRNNPFLKNKLEILKSRTEQKKLEMGAMIR KLTQPVHVY" gene complement(<276691..>279315) /locus_tag="CRE_29672" /db_xref="WormBase:WBGene00086126" mRNA complement(join(<276691..277282,277334..277467, 277511..277657,277708..277813,277878..278063, 278297..278609,278657..278771,278815..278911, 278960..279161,279204..>279315)) /locus_tag="CRE_29672" /product="hypothetical protein" /db_xref="WormBase:CRE29672" /db_xref="WormBase:WBGene00086126" CDS complement(join(276691..277282,277334..277467, 277511..277657,277708..277813,277878..278063, 278297..278609,278657..278771,278815..278911, 278960..279161,279204..279315)) /locus_tag="CRE_29672" /note="contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316); contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12535.1" /db_xref="InterPro:IPR005514" /db_xref="PFAM:PF03761" /db_xref="WormBase:CRE29672" /db_xref="WormBase:WBGene00086126" /translation="MRLLILLVGCLLSFGFSQKLSTAEDEERSKTCGRIPNQNAKTND ELSPWTVRIQIKDKHFNPATLVSRRHILSSGSIVIGKVANEEKWKWSMNGEEIDMANC KDNKMEVPTELLTVDLVACSNHFLCPWRPEVPIRSAHYIGPCDAKSSPEGLLIVEMER DIPEDSEYFTPACIPESDISIAIDEQLTSHKAHIDNNQNIVIEMLPTTIIACSTPSDH LFCGELSKCPEGSTSPLIKIVDGVDTVVGFSVYYNDECKKKTFASVMHYKQQLCDLTG ICQTLPIDLTPWTVNVNTPNDNGYIYNPATLISKRHVVVAAFALFQDKPAKYFDGTAV DLSKCQNNVMEISTEIIKKTSVDLSTCNDPSKCGSQISKQVKSAVYFGVCEPEVRAFG VVLLEMDSDLPAELPYFVPSCIPGGTAYLLIILSRNMNGQETLIGILYYRGPKCKNDQ YVSIEMMSDLFCLYAGICAEKSSAPVTVPSIPAATGNVPIETTPSKSDPSTEKARDQD TVTTIPEDSSAEDATTQKDDKVTDQKPEDEITPEAVQPTDKPEEPDTTEPAETDGDGT TVEDNPPTEKPDEPEPTEPGDDDDDDPEEDPKEKPKDVQNPEKQVQNPRKVPRVDDEE EEEDDEEEEENEHKTTTVITSSAMISSSKIVVSLICVIFGFEI" gap 279603..288348 /estimated_length=8746 gene <288430..>290240 /locus_tag="CRE_29461" /db_xref="WormBase:WBGene00074913" mRNA join(<288430..288659,288712..288842,288885..289080, 289145..289250,289301..289415,289479..289573, 289648..289871,290021..>290240) /locus_tag="CRE_29461" /product="hypothetical protein" /db_xref="WormBase:CRE29461" /db_xref="WormBase:WBGene00074913" CDS join(288430..288659,288712..288842,288885..289080, 289145..289250,289301..289415,289479..289573, 289648..289871,290021..290240) /locus_tag="CRE_29461" /note="contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316); contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12425.1" /db_xref="InterPro:IPR005514" /db_xref="PFAM:PF03761" /db_xref="WormBase:CRE29461" /db_xref="WormBase:WBGene00074913" /translation="MLPTTIIACSTPSDHLFCGELSKCPEGSTSPLIKIVDGVDTVVG FSVYYNDECKKKTFASVMHYKQQLCDLTGICQKTSPGPYTPKQIPPPTEISLSNKFIK LTKSEDVANTESCGKPTNPGSSLPIDLTPWTVNVNTPNDNGYIYNPATLISKRHVVVA AFALFQDKPAKYFDGTAVDLSKCQNNVMEISTEIIKKTSVDLSTCNDPSKCGSQISKQ VKSAVYFGVCEPEVRAFGVVLLEMDSDLPAELPYFVPSCIPEKKVPEVGDSLHLHSIG QDKNKQYTRRISVAKTGKCTKGYRMYCQICATQTDCNEHSNGGFSRTQNGREVLIGVM YYHDSTCTVEDLVSMEVLSDLFCLYAGICNTKSTVNATGQKHGGKDSQKQSVPQKQAG NPKKPDGAEETGDGGDDSKVDAASSCLLTIYFSAVAFSLMSTLFGF" gene complement(<290714..>291484) /locus_tag="CRE_29673" /db_xref="WormBase:WBGene00064273" mRNA complement(join(<290714..291305,291357..>291484)) /locus_tag="CRE_29673" /product="hypothetical protein" /db_xref="WormBase:CRE29673" /db_xref="WormBase:WBGene00064273" CDS complement(join(290714..291305,291357..291484)) /locus_tag="CRE_29673" /note="contains similarity to Pichia stipitis Predicted protein.; TR:A3LYM9" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12443.1" /db_xref="WormBase:CRE29673" /db_xref="WormBase:WBGene00064273" /translation="MNGQETLIGILYYRGPKCKNDQYVSIEMMSDLFCLYAGICAEKS SAPVTVPSIPAATGNVPIETTPSKSDPSTEKAGDQDTVTTIPEDSSAEDATTQKDDKV TDQKPEDEITPEAVQPTDKPEEPDTTEPAETDGDGTTVEDNPPTEKPDEPEPTEPGDD DDDDPEEDPKEKPKDVQNPEKQVQNPRKVPRVDDEEEEEDDKEEEENEHKTTTVITSS AMISSSKIVVSLICVIFGFEI" gene <291965..>292530 /locus_tag="CRE_29462" /db_xref="WormBase:WBGene00086156" mRNA join(<291965..292161,292311..>292530) /locus_tag="CRE_29462" /product="hypothetical protein" /db_xref="WormBase:CRE29462" /db_xref="WormBase:WBGene00086156" CDS join(291965..292161,292311..292530) /locus_tag="CRE_29462" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12704.1" /db_xref="WormBase:CRE29462" /db_xref="WormBase:WBGene00086156" /translation="MYCQICATQTDCNEHSNGGFSRTQNGREVLIGVMYYHDSTCTVE DLVSMEVLSDLFCLYAGICNTKSTVNATGQKHGGKDSQKQSVPQKQAGNPKKPDGAEE TGDGGDDSKVDAASSCLLTIYFSAVAFSLMSTLFGF" gene <292843..>295984 /locus_tag="CRE_29463" /db_xref="WormBase:WBGene00064272" mRNA join(<292843..292954,292997..293198,293247..293277, 293386..293500,293549..293855,293908..294038, 294083..294278,294343..294448,294495..294609, 294656..294750,294803..295026,295081..>295984) /locus_tag="CRE_29463" /product="hypothetical protein" /db_xref="WormBase:CRE29463" /db_xref="WormBase:WBGene00064272" CDS join(292843..292954,292997..293198,293247..293277, 293386..293500,293549..293855,293908..294038, 294083..294278,294343..294448,294495..294609, 294656..294750,294803..295026,295081..295984) /locus_tag="CRE_29463" /note="contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316); contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12670.1" /db_xref="InterPro:IPR005514" /db_xref="PFAM:PF03761" /db_xref="WormBase:CRE29463" /db_xref="WormBase:WBGene00064272" /translation="MRLQVFVLSFFLSFGFSEKLSPEEDQERAKTCGRISNQNAETND ELSPWTVRIQIKDKHFNPATLVSKRHILSSGSIVINKVKNKEKWKWSMNGEEIDMANC NDNKMEVPTELLTAHYIGPCDAKSSPEGLIIVEMERDIPGDSEYFTPACIPDISIAID EQLTSHKAHIDSNQNIVIEMLPTKVVACATPSDHLFCGELSKCPTGSTIPLVKRVDGA DTVVGFSIHYNGDCKLFTFASVMYYKEHLCDLIGICEKTSPGQYTPKQIPPPTEISLS NKFNKLTSSELSEYTKSCGKPTISGSSLPIDLSPWSVTVITQESTGMIYYPATLISKR HVVVVSFAFLKENPVKFFDGTDVDRSKCQFNVMEIPTEIIKKTSVDLSTCNDASKCGS QVSKQVKSAVYFGVCEPEVHAFGVILLEMESDIPAELPYLVPSCIPGKATPVFEDNLH VHSIGLDTNGQYTRQINEAKTEKCTYGYLFYCKVCATRIECNKDSSGGLSRNMNGQET LIGILYYYDPKCVNDQFVSMEMLSDLFCVYAGICAEKSSVPAAVPSITATSGYVPVKT TPSKPDPSTEKAVDQDTLTTMPSDSSAEDATTQKDDKVVDLSDVSTVREQKLEDEITP EAVQPTDKPKELETTEPAELDEGENTVEDNTPTENGKVPVKTTPSKPDPSAEKDVDQD TVTTIPAESLGGDVTTQKDDKVIDQKPEDEITPEVVQPTDKPEEPVTTEPVESDGDET TLEDNPPTEKPDEPAATEPTEPEDDDDNDEDPEEIPKEKPKDVQKPEKQVQNPRKVPR VDDEEEEEDDEEEEENEHKTTTAIPSSGAMIRSSGIVVSLICVIFDF" gene <304320..>306048 /gene="Cre-unc-120" /locus_tag="CRE_29464" /db_xref="WormBase:WBGene00064271" mRNA join(<304320..304544,304596..304877,305335..305647, 305906..>306048) /gene="Cre-unc-120" /locus_tag="CRE_29464" /product="CRE-UNC-120 protein" /db_xref="WormBase:WBGene00064271" CDS join(304320..304544,304596..304877,305335..305647, 305906..306048) /gene="Cre-unc-120" /locus_tag="CRE_29464" /note="contains similarity to Pfam domain PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain); contains similarity to Interpro domain IPR002100 (Transcription factor, MADS-box)" /codon_start=1 /product="CRE-UNC-120 protein" /protein_id="EFP12483.1" /db_xref="InterPro:IPR002100" /db_xref="PFAM:PF00319" /db_xref="WormBase:CRE29464" /db_xref="WormBase:WBGene00064271" /translation="MTEVEDFAQLLQKLQNSSPALPEGTSSTPTPSSSTGLLPNGKKT KGRVKIKMEYINNKLRRYTTFSKRKTGIMKKAFELSTLTGTQVMLLVASETGHVYTYA TKKLQPMISSDTGKAMIQSCLNAPGGEGSDVQPSRTEFTFDSGNGGNGMRKRKMLNDV MSADASSPSMAGFSPFLPSMAPLFSTFGEDDYNNTESGDDSDSEEAASDIKEEDQGSP TMVKQELIETDSVTAALQQTIKEAMKQAASNRQALKKSKPTPNNQKAFFNPFLLQGGA NASNLLAAAAKQGDEAGSLSSNHLLSLGLNLQQLIDSAAYASNE" gene complement(<306698..>307042) /locus_tag="CRE_29674" /db_xref="WormBase:WBGene00086112" mRNA complement(join(<306698..306888,306931..>307042)) /locus_tag="CRE_29674" /product="hypothetical protein" /db_xref="WormBase:CRE29674" /db_xref="WormBase:WBGene00086112" CDS complement(join(306698..306888,306931..307042)) /locus_tag="CRE_29674" /note="contains similarity to Saccharomyces cerevisiae Protein of unknown function; null mutant displays increased frequency of mitochondrial genome loss (petite formation) and reduced growth rate in minimal glycerol media; SGD:YPL158C" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12404.1" /db_xref="WormBase:CRE29674" /db_xref="WormBase:WBGene00086112" /translation="MRIQSIILLTIISIIGYSTCVEDEEELTIYDHPGVESDLLASKN AERELQISENAVSIDDDEEFEDCNEDEEDEEEDDDDEEDFDDEFLFRSKDSIGKEL" gene complement(<307358..>310424) /locus_tag="CRE_29675" /db_xref="WormBase:WBGene00064270" mRNA complement(join(<307358..307513,307561..307747, 307802..308039,308084..308258,308303..309460, 309671..310021,310071..>310424)) /locus_tag="CRE_29675" /product="hypothetical protein" /db_xref="WormBase:CRE29675" /db_xref="WormBase:WBGene00064270" CDS complement(join(307358..307513,307561..307747, 307802..308039,308084..308258,308303..309460, 309671..310021,310071..310424)) /locus_tag="CRE_29675" /note="contains similarity to Pfam domains PF02170 (PAZ domain), PF02171 (Piwi domain); contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR003100 (Argonaute and Dicer protein, PAZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12476.1" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /db_xref="PFAM:PF02170" /db_xref="PFAM:PF02171" /db_xref="WormBase:CRE29675" /db_xref="WormBase:WBGene00064270" /translation="MASGSGRGRGRGSGTNNSGERTQDYYGTIQPDLFVRQPGEPKIG SSGRPQRCFANFVPIEMEKADYSIYQFHIEFDPVVDSKHVRERMLLHENVTDEIGCYH VFDGMILYLTKEWHQNQEIEVPHPNTGDLIKVIFKQTNRFLLDNAQTINIFNTIVRRC FDEMQLVQLGRHYFNSKDARNVREYNMSILPGFETAIRMYENQLMLCVENRFKMVRRD SMFDLVSLYYIKTCNGGLKKEMGASQNNRQRVQEKMNEMYGGSTIITLYNNKLHRFTR LDWTINPLSEFQKDGQSITLKEYFKIQYGKEIKHDDQPIIVSFSYMVLDFRISHFYFQ ISEGKPKQPGEPPQVNYIVPELCFPTGLTDEMRKDFRMMKEIAMYTRLSPQQRLQETR KLITEFHSNERVQACLNYWGIRLADDLANVNARVLKSEPLHAEGTKKYEGRNAEWARG VKESGIYRRSDMTNWIVVGPNSGNSGMLIQKFIGKQKNFEFLKFQISFSGESSRLGST LRVPIGDPMCVPIKGVTPNDYLEGVKLAIKQVAGETVHMLVVMLVDDNKTRYDSLKKF LCVECPIPNQCVNLRTLAGKSSDGGENKNFGSIVLKIFLQMICKTGGALWKVNIPLSD TMIVGYDLYHDSTLKGKTVGACVSTTSGDFTEFYSQTRPHENPTQLGNNLTHFVRKAL KKYYDNNNNTLPTRLILYRDGAGDGQIPYIKNTEVKLVRDACDMVTQRAAKINNKEHK PITLAFIIVTKRVNMRILKQGASSNTAINPDPGTVVDTVVTRPERMDFYLVPQFVNQG TVTPVSYNIIYDDTGLGPDKQQQLAFKLCHLYYNWQGTVRVPAPCQYAHKLAFLTAQS LHGDSDEQLRDKLFFL" gene <312177..>313957 /locus_tag="CRE_29465" /db_xref="WormBase:WBGene00064269" mRNA join(<312177..312269,312319..312384,312434..312604, 312652..312960,313000..313366,313415..313574, 313621..313746,313792..313885,313940..>313957) /locus_tag="CRE_29465" /product="hypothetical protein" /db_xref="WormBase:CRE29465" /db_xref="WormBase:WBGene00064269" CDS join(312177..312269,312319..312384,312434..312604, 312652..312960,313000..313366,313415..313574, 313621..313746,313792..313885,313940..313957) /locus_tag="CRE_29465" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type); coded for by the following C. remanei cDNAs: DY527600" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12447.1" /db_xref="InterPro:IPR007087" /db_xref="WormBase:CRE29465" /db_xref="WormBase:WBGene00064269" /translation="MNFQRESVFTSVTHGLSADCRQANAKLRQTLESYNFGAFLMEKT CSKCPNDDCNTSFIFILQQRDFFRLKNQVQFEIPPTFIVHNSFSELIEADRKIRKKLL EDNSLGIQVGPEMANKLVDACPPVCNIMCQTDFKVGKRDMGDQTEEIVRKDAESQSTP EEPIISAQPSDSIHMPTETDTSFINRHESVVRQLESPLRTIEVQQEQDDDDVVFIEIR PRNGPPMAVKQEEPAEEPTEEVAAVVPVYVEPIEPAREVKEEMIEEAPEEVMQPLIEP PIEKQMAPPPAGTGITVELETPAAITPSTPNNLNHSFVTSMAALMSNVSTTSTSDSFY SPASSNTSMSESTGGSAKKRLKFSDVEMCSTCWAVSYYTKLEEYCSHVLEMHAAISRF KCTICDKRLGSTISANHHIRFHPEQGDVANPQALIVPEVSEESIQKFIRAAIQCYPEK FRNVQSDEIYGIIRNLP" gene <314189..>314690 /locus_tag="CRE_29466" /db_xref="WormBase:WBGene00064268" mRNA join(<314189..314338,314383..314544,314592..>314690) /locus_tag="CRE_29466" /product="hypothetical protein" /db_xref="WormBase:CRE29466" /db_xref="WormBase:WBGene00064268" CDS join(314189..314338,314383..314544,314592..314690) /locus_tag="CRE_29466" /note="contains similarity to Homo sapiens Protein; VG:OTTHUMP00000199681" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12589.1" /db_xref="WormBase:CRE29466" /db_xref="WormBase:WBGene00064268" /translation="MLDRLVSLAQEIQKIEDDVKELRQAEQAVQRTERMDLKVSKIDG FHDKLRVKMDAAVQRKMEKLDEKSDELEKIYRNLVCMSSEVPTAQNFEEDAELVSSYC LKLKTFLRSDRSEDCPKITLSVEQATRRLLNNPV" gene <314817..>316894 /locus_tag="CRE_29467" /db_xref="WormBase:WBGene00064267" mRNA join(<314817..314905,314955..315058,315108..315217, 315262..315600,315645..315853,315899..316024, 316067..316151,316198..316431,316562..316792, 316838..>316894) /locus_tag="CRE_29467" /product="hypothetical protein" /db_xref="WormBase:CRE29467" /db_xref="WormBase:WBGene00064267" CDS join(314817..314905,314955..315058,315108..315217, 315262..315600,315645..315853,315899..316024, 316067..316151,316198..316431,316562..316792, 316838..316894) /locus_tag="CRE_29467" /note="contains similarity to Interpro domain IPR005479 (Carbamoyl phosphate synthetase, large subunit, ATP-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12370.1" /db_xref="InterPro:IPR005479" /db_xref="WormBase:CRE29467" /db_xref="WormBase:WBGene00064267" /translation="MNVPSEDFIEQLMEFRERNGSFDDFRFMCKQEMRENLVNNYFPY NKLIARALFKNQHIMFIGDSLIRAMYKDFLALLQTGDLCTVQDLRVSNEDSIFGDKHI DFLELEANRVFRQAREFQSNQHLIQYFFTNRAMREDLEKTCLMIEATDERPDIVVMNS AIWDISRFPARLSQRWTSQSMDNLEEEINVAEDYYNRIAMFCRRMRVLLPPTSTVVWV LMPPSSTPESNVSGGFLANNHLKFYEIRARLLEANVRAAQIVREAGFDVLDLSFHFRL SNFQAFRIKDGVHFNTIATRFMNQLLIGHIADAWGIDIRRKWPQKLIDKTLIKSQLFN VALDFLQDSNKWKHRNEVVHQHLRILAFENVKLPDAAGNPGTMTMQQLNEKMRVLLMF MKFQARSQSDAERNAKAFAGQIPEELSRFSQEDLVQIGKMIKEMCNEWKGKLPCVRLA TTNKRVHEIGARKVLLDTTPSAPPGINSIPVPPVVEVEGSSVNITPSSDGSSPSGVPN KILPPHVPKKKRRVSESRQ" gene complement(<317045..>319124) /locus_tag="CRE_29676" /db_xref="WormBase:WBGene00064266" mRNA complement(join(<317045..317307,317360..317717, 317765..317906,317999..318086,318697..318957, 319004..>319124)) /locus_tag="CRE_29676" /product="hypothetical protein" /db_xref="WormBase:CRE29676" /db_xref="WormBase:WBGene00064266" CDS complement(join(317045..317307,317360..317717, 317765..317906,317999..318086,318697..318957, 319004..319124)) /locus_tag="CRE_29676" /note="contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316); contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12548.1" /db_xref="InterPro:IPR005514" /db_xref="PFAM:PF03761" /db_xref="WormBase:CRE29676" /db_xref="WormBase:WBGene00064266" /translation="MKITLIFGFSLLIGTLCDESKYRLTSRENEIRLGSCGESLGETL WLAPLYTEDGYVEKLREEKMNEQKKTTVLPEVERTTTNVETESTTTTEDATTGTTKLD STEETVTVTEKTEETSTELMLTTTKPKPSSILISNAVFISQNHLILSSSWFIRYLDSA WKWKDNNRIVNDSICKEDRNASFLMKPSNGYVLDIHRQWRKVEEIIFLRFCEFHKNSE GFLALISVSRKGLTTVPVVCLPKSKQKERELNKRKIAEYGEESEKRVEQIEWSSDAEV VNSVRKCGTTGSSSYYTLGDSCKMSRGAPLVESDPLGIQRLIGVGVQDITGLKPHFHI TQKYINEICKTVGICKLETGVIDQVPSEKDEEVKKIMDDDYVEIVEEPEISVYNGQEE KRMIFGTIGLILVFWIFK" gene <319866..>320821 /locus_tag="CRE_29468" /db_xref="WormBase:WBGene00086130" mRNA join(<319866..319922,319982..320082,320225..320273, 320318..320528,320578..320659,320710..>320821) /locus_tag="CRE_29468" /product="hypothetical protein" /db_xref="WormBase:CRE29468" /db_xref="WormBase:WBGene00086130" CDS join(319866..319922,319982..320082,320225..320273, 320318..320528,320578..320659,320710..320821) /locus_tag="CRE_29468" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12559.1" /db_xref="WormBase:CRE29468" /db_xref="WormBase:WBGene00086130" /translation="MGACDKADLSQKVMCCAGKVQVIILAGIFFLAGIASAGLIYWQI STFQTIIPDKDVSSMYILMMLPGLMVLSALCLFAMLGINPKMLLVICIVWPVLTAAVA GGLIYFCYYLVEYSQKEGNHPGMSKKELLKTFEDHGIYIFYVVPAGAAMHIILAIYCI VLLVCLACCQRGGAGRDEDLYSLEENEEADGIESSTKSHISIE" gene complement(<323541..>325263) /locus_tag="CRE_29677" /db_xref="WormBase:WBGene00064265" mRNA complement(join(<323541..323967,324131..324246, 324293..324370,324900..324978,325029..325099, 325216..>325263)) /locus_tag="CRE_29677" /product="hypothetical protein" /db_xref="WormBase:CRE29677" /db_xref="WormBase:WBGene00064265" CDS complement(join(323541..323967,324131..324246, 324293..324370,324900..324978,325029..325099, 325216..325263)) /locus_tag="CRE_29677" /note="contains similarity to Xenopus tropicalis Protein SFRS12IP1.; SW:Q28EE8" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12638.1" /db_xref="WormBase:CRE29677" /db_xref="WormBase:WBGene00064265" /translation="MSRVDLNQSIWGCAAKNHFFIHSGVRAALSLTLFLSFIDYVNLP LDASPDLKGIFLGHFTMTFLVYFTLSMAYLLLLFCPNQIWYGICMALEGTRLTFFLYR TTYKLIGFGLTQEEDKHERELKKYYTCENFLYIPKRSSDLYVVRVTSPSAEQATDIAI DSYGNSYIRRGAPSPDPEESGSDSDENSGEEQIEKDHSGSRKSRKSQKSKKPQRSQKS TKMEKTQENTDKSSKSQKRKESSSKSTRSKSSKSLKNLGENSLNSDEKVTHIAF" gene <325736..>326587 /locus_tag="CRE_29469" /db_xref="WormBase:WBGene00086132" mRNA join(<325736..325795,325972..326131,326199..326280, 326329..>326587) /locus_tag="CRE_29469" /product="hypothetical protein" /db_xref="WormBase:CRE29469" /db_xref="WormBase:WBGene00086132" CDS join(325736..325795,325972..326131,326199..326280, 326329..326587) /locus_tag="CRE_29469" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12566.1" /db_xref="WormBase:CRE29469" /db_xref="WormBase:WBGene00086132" /translation="MTKMKQDVVLKGLGGLTMIPFGVSVGFLGYNGYVLFYEKLKYVW PPFVLKEVQSPVPPGTPITAEDMVVYFTKVQISAITFAMFAVVSILVYCSFILANLSF LYKAPQPLPRPRRRAPMKRHEEEDDVDETDGDDNEKEEKGEKDKNEKSKRKKKEENPN DKARSEKGTGAGTEPGTGTGTGTGAD" gene complement(<327110..>328563) /gene="Cre-fut-5" /locus_tag="CRE_29678" /db_xref="WormBase:WBGene00064264" mRNA complement(join(<327110..327272,327319..327446, 327495..327883,327936..328116,328159..328242, 328315..>328563)) /gene="Cre-fut-5" /locus_tag="CRE_29678" /product="CRE-FUT-5 protein" /db_xref="WormBase:WBGene00064264" CDS complement(join(327110..327272,327319..327446, 327495..327883,327936..328116,328159..328242, 328315..328563)) /gene="Cre-fut-5" /locus_tag="CRE_29678" /note="contains similarity to Pfam domain PF00852 Glycosyltransferase family 10 (fucosyltransferase); contains similarity to Interpro domain IPR001503 (Glycosyl transferase, family 10); coded for by the following C. remanei cDNAs: DT936814" /codon_start=1 /product="CRE-FUT-5 protein" /protein_id="EFP12334.1" /db_xref="InterPro:IPR001503" /db_xref="PFAM:PF00852" /db_xref="WormBase:CRE29678" /db_xref="WormBase:WBGene00064264" /translation="MWLNSMKRGFNKKCPRHLNRPMVYLISFTYFLSIFFCLYNWESL MARWRHRNDSKSVLIFAATNYFGKPINNSWLESCPEDVKSYCSITNEETSFSIADGVL FHSRDFNEQLLSEFKFPRRFDVPYVMMTQENPFYSYLEEYKYFFNWTMTYRRDSDVHY PYGALVKNEKFVNLTEIWNSKTKEAIWLNNARASSRNRRVEFTEKLKSEGMNIDLMGN AFNNTPKECPRFARPPNCTHKLLSSVCFPLFRIFTTNFRPYKFYIAFENSNCEDYVTE KFWEKAGEYNMVPIVFERKIYRNLGIPDEMYIAVNDFQNLEDFISFVKSVSSNKDKYL KYHQWRKQYRIIESSSENYGFCQLCQKLLKLRGHKLKEKSYANLKDWYSTPSCDNSFV DKYLQ" gene complement(<329498..>329928) /locus_tag="CRE_29679" /db_xref="WormBase:WBGene00086113" mRNA complement(join(<329498..329859,329922..>329928)) /locus_tag="CRE_29679" /product="hypothetical protein" /db_xref="WormBase:CRE29679" /db_xref="WormBase:WBGene00086113" CDS complement(join(329498..329859,329922..329928)) /locus_tag="CRE_29679" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12408.1" /db_xref="WormBase:CRE29679" /db_xref="WormBase:WBGene00086113" /translation="MVKLIGDNFTPVTAGNYHVLDTWIGSKRRPECIKTGSANIPGYE TDLSSPCSRVRVFEWLHGVAPNPPNFEADWDHIREPNFLFRREECQSVMKRSKEEATL NDIACSRPFNFFVEEKHQSS" gene <330428..>332473 /locus_tag="CRE_29470" /db_xref="WormBase:WBGene00064263" mRNA join(<330428..330574,330620..330673,330720..330972, 331018..331562,331610..331713,331787..332046, 332133..>332473) /locus_tag="CRE_29470" /product="hypothetical protein" /db_xref="WormBase:CRE29470" /db_xref="WormBase:WBGene00064263" CDS join(330428..330574,330620..330673,330720..330972, 331018..331562,331610..331713,331787..332046, 332133..332473) /locus_tag="CRE_29470" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain; contains similarity to Interpro domains IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12363.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00059" /db_xref="WormBase:CRE29470" /db_xref="WormBase:WBGene00064263" /translation="MKMLMKILIIFGLLASITNAQVDRDWSFQRMCEFWDGGSSYRPR PNGFNSIEGDKCTFEYPVATDSRESAKRYCEENVPYHINDVTAGERTKCSAEATLICK NEWIQLFGRCYKMTKELMTRDNAVEHCKTQKDDATIAFLHRETLPFRIYDYFTRVSRL WIDASEAITKDLIDENVNGNLLLAIDGYMYNLPNVALTRVDSSETAMVLCEYTPPMNR AESNHLLKKYGEIYYPTVSTSEGAFIRTTSSLNRIDEDLFKDNRYCSRVMNPFIHNSN ARSAIPTREFLDEVNKVQNGLIIRTAAFSKNSRKDERIGATCSAKKGATHRVLWRGSD GNDVSVPVDKSLWRSDEPNEICDAGSWSSALVSGRDGSPGLEAMSDARYAPIYCQNTV DSYSYGDCPAGFTEYYRKSIGQKFCHRFFSEKKTQPDAEAHCQTFGAHLTGYTDSEEL KLIGTLNVLGIWETLIGGRRRSECITNGAKNEPGYSREESSPCSRKRVYEWKNGVAPN PPTIENDWSFDYEPNYVAYKEECLTIVRHKGVSLNDNECDWPFPFVCGMEAPIVKLLS S" gene complement(<333276..>334373) /locus_tag="CRE_29680" /db_xref="WormBase:WBGene00086125" mRNA complement(join(<333276..333405,333457..333538, 333587..333683,333782..333859,333903..333981, 334210..>334373)) /locus_tag="CRE_29680" /product="hypothetical protein" /db_xref="WormBase:CRE29680" /db_xref="WormBase:WBGene00086125" CDS complement(join(333276..333405,333457..333538, 333587..333683,333782..333859,333903..333981, 334210..334373)) /locus_tag="CRE_29680" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12524.1" /db_xref="WormBase:CRE29680" /db_xref="WormBase:WBGene00086125" /translation="MCDADLCQKIWGLRAVVFHSNSAFDLFNKFQTHFFIAAGCRAAL AFLYLLAIFDYVGLPEEEAEKIRETFWNKFMNNFLIHFIYSAFILAWLLCPSRCWYGF LSVLQLFYAVFAVFETSIELKDYIAAQHGGENYEHFKIGMFGYFAHNYLSVVVAFYVG FILVRLSCLSPPKQPDLYVVHVIHDKTKDSSSSSSSEKKSEDRESQKSP" gene complement(<334889..>338090) /locus_tag="CRE_29681" /db_xref="WormBase:WBGene00064262" mRNA complement(join(<334889..335287,336142..336720, 336769..336936,337505..337820,337868..337971, 338019..>338090)) /locus_tag="CRE_29681" /product="hypothetical protein" /db_xref="WormBase:CRE29681" /db_xref="WormBase:WBGene00064262" CDS complement(join(334889..335287,336142..336720, 336769..336936,337505..337820,337868..337971, 338019..338090)) /locus_tag="CRE_29681" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12536.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE29681" /db_xref="WormBase:WBGene00064262" /translation="MKPAGYSACLLLILATCIASVCSEDTKYDLSDKHQFTFYFRDRW ETMFNTPQPVANPAKADIVTLIGDQLYFQPCYTVARQSGKRYFTDRLWGMMNALKNCH VTASTVLPVDPTINKDQAVLELEFIQNATYKSYTKRLHEISMEVKARKTGGNDPYRIY RITEILNSRGIHVNYSISSTSTNPHGISSDRKIDYFLILESQKRENRMSDEEEEDVNF KAGVEISSSKASYTVVRLLGEGGFGAVYLVKDAKDKTYAMKVERKLEKRKHSKLKMEI AILKLVGTGKHFTKIVDRGKKDKEGFFFLVMELVGKSLADLKQDRPDKVFSFATGLGV ASQCLEAVEELHKFGFIHRDLKPQNYACGLDDKKHLIYILDFGIARKYLNTKNELKTP RESVGFKVKFLTVLVMKNATLGTVRFAPLACHRSTENGPKDDCESWFYLLIDLILVGG LPWRKITDKNDVLKCKEECRKEKRHTLYTGIKHTTELNKILDYIDSRAYQDRVDYAFI YKALGEACTSAGLDIDAPYDWEKEREKESLSNEKSSK" gap 335697..335832 /estimated_length=136 gene <342575..>343642 /locus_tag="CRE_29471" /db_xref="WormBase:WBGene00064261" mRNA join(<342575..342670,342715..342840,343048..343122, 343174..343257,343306..343484,343537..>343642) /locus_tag="CRE_29471" /product="hypothetical protein" /db_xref="WormBase:CRE29471" /db_xref="WormBase:WBGene00064261" CDS join(342575..342670,342715..342840,343048..343122, 343174..343257,343306..343484,343537..343642) /locus_tag="CRE_29471" /note="contains similarity to Pfam domain PF08477 Miro-like protein; contains similarity to Interpro domains IPR003577 (Ras small GTPase, Ras type), IPR013684 (Miro-like), IPR003578 (Ras small GTPase, Rho type), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12686.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR013684" /db_xref="PFAM:PF08477" /db_xref="WormBase:CRE29471" /db_xref="WormBase:WBGene00064261" /translation="MNRSKSVGRRDAKPRGERRQNKVTVAVLGAERVGKSAMVSQFLW HKFVEDYRPTVEEFNWIEYEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGTADAFLVVF AADDASSLEEALTTVADIHARRGKNVPVLLVANKTDQPCLSCCSSKSDMECCALKEEE VRACFHEILLRTRPNLNIQGFELRKRRQSMPSSRGYSGVEPKDIEKIKSARRQQKDHC IIS" gene complement(<344353..>346112) /locus_tag="CRE_29682" /db_xref="WormBase:WBGene00064260" mRNA complement(join(<344353..344538,344579..345148, 345230..345435,345499..345865,345921..>346112)) /locus_tag="CRE_29682" /product="hypothetical protein" /db_xref="WormBase:CRE29682" /db_xref="WormBase:WBGene00064260" CDS complement(join(344353..344538,344579..345148, 345230..345435,345499..345865,345921..346112)) /locus_tag="CRE_29682" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00017 (SH2 domain); contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12680.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE29682" /db_xref="WormBase:WBGene00064260" /translation="MNSEYSRVKSIRRPVSLGNRSQRSKRTKKKKNDEEKTVGSGNQK TLFFRRPKNDSNPEETEAFANICRCLIEHRWYHGVMPRGEISTLLEDEGDFCVRKTTE KGKPIVCISVKCQKEVRHFPLVFENGQWTLKNLIKTRRFFEVVELLNALVTEKISLSG AILVRAVPRPDYYIPHSDISLICKLGEGAFGEVWKGSLKRHEDEKVKKVEEKSAPGLP TTGRQEGLSEKGRSKLYVAVKKMKGNATKAMTEEFVMEGKLMRQLVHPNIVTVFGVAP SEEPLMIVLELAANGCLKAYVSKYQCPMDQLMQFTADAARGMAYLSSKLVIHRDLAAR NLLLGSSVEVKISDFGLSSSGKTEIKVKQMKVPIRWLAPETLEEGVFSTKTDVWAYAV TLWEIFTRCQSDPYPGLTNQQAKDLIRGDALPMNPPEGTPPTVVKIMEDCFAKNPDDR PSFPAILKRLCPDEDIAAYEPKSQCSQSQSSPAKKSSGPSAEPSALSARSKRPARK" gene complement(<347316..>348422) /locus_tag="CRE_29683" /db_xref="WormBase:WBGene00064259" mRNA complement(join(<347316..347453,347536..348006, 348058..348207,348259..348291,348363..>348422)) /locus_tag="CRE_29683" /product="hypothetical protein" /db_xref="WormBase:CRE29683" /db_xref="WormBase:WBGene00064259" CDS complement(join(347316..347453,347536..348006, 348058..348207,348259..348291,348363..348422)) /locus_tag="CRE_29683" /note="contains similarity to Homo sapiens Isoform 1 of Protein FAM76B; ENSEMBL:ENSP00000351631" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12630.1" /db_xref="WormBase:CRE29683" /db_xref="WormBase:WBGene00064259" /translation="MPEPILKKCFNCRIFLPDDAKCQKNEAKYGVPGTCQYCKLNAAF HDQKCVWCSHAERKYGTPFSCQSCKLQCGFAKKESEKYEGAPLLCRLCILQARHTGQT SVAGIPIPPEKPEKNGDGSSAEQKAEKEREKERHRSSRHHKDKDHRRDDKRHREHREH RSGHKRRHEESNNNGTSSSSSGVPPLTINNENGHGFPPFGERDHGENMEKQHRMEDEI RRLKAAISEKDQLLFDKDKQISNLKADQYNLEKKHRERVQQLIKEKEDSIRAIEHMRS SKSSKKN" gene complement(<349164..>350271) /locus_tag="CRE_29684" /db_xref="WormBase:WBGene00086117" mRNA complement(join(<349164..349403,349992..350147, 350233..>350271)) /locus_tag="CRE_29684" /product="hypothetical protein" /db_xref="WormBase:CRE29684" /db_xref="WormBase:WBGene00086117" CDS complement(join(349164..349403,349992..350147, 350233..350271)) /locus_tag="CRE_29684" /note="contains similarity to Homo sapiens Lymphocyte antigen 6D precursor; ENSEMBL:ENSP00000301263" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12457.1" /db_xref="WormBase:CRE29684" /db_xref="WormBase:WBGene00086117" /translation="MGQETGGDSDGFQNEQLQCNYCVHSRKNKDVSEGVKHEPDCMNH LKFLSRPDLRRTCTPSEKYCVTTVTNLNGFFIEVERDCAESCEQGCEQHGYGLFHTEC TRCCREPLCNEFDGRHFYEPLDAPRSQQLFFILFFIAVALVL" gene complement(<350588..>351239) /locus_tag="CRE_29685" /db_xref="WormBase:WBGene00064258" mRNA complement(join(<350588..350773,350827..350883, 350952..>351239)) /locus_tag="CRE_29685" /product="hypothetical protein" /db_xref="WormBase:CRE29685" /db_xref="WormBase:WBGene00064258" CDS complement(join(350588..350773,350827..350883, 350952..351239)) /locus_tag="CRE_29685" /note="contains similarity to Interpro domain IPR008162 (Inorganic pyrophosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12721.1" /db_xref="InterPro:IPR008162" /db_xref="WormBase:CRE29685" /db_xref="WormBase:WBGene00064258" /translation="MSPNCETPPSSSPPSRFVPSLACIAEEEPRIIFTRRIYVPGGSS SKPFQVEIPIYDLNIYAPEPGKTSMPESYQRLLAQMDKYIEYQSNSERHKKMAKELRQ KVAFEQAEAKRLSTPNFTHRDWYWYSEETRNFVDEPVFTRKIVEKCEEKTKESPSNVA ALAKCDDDEFDLNADF" gene complement(<351514..>352408) /locus_tag="CRE_29686" /db_xref="WormBase:WBGene00064257" mRNA complement(join(<351514..351594,351711..352178, 352226..>352408)) /locus_tag="CRE_29686" /product="hypothetical protein" /db_xref="WormBase:CRE29686" /db_xref="WormBase:WBGene00064257" CDS complement(join(351514..351594,351711..352178, 352226..352408)) /locus_tag="CRE_29686" /note="contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type); coded for by the following C. remanei cDNAs: DR409238, DY526216" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12598.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="WormBase:CRE29686" /db_xref="WormBase:WBGene00064257" /translation="MDWVQCNNCGAKPNQVKMFLTRCAHVFCQSCTEKAKESQCYLCK KPLTVDEINKNLRPDLMELFKDPRQVSAELMTELQKVSTFQAKQREIFMKFKNAEMKK ETDRFNDARTKQMKITQEIEKRKKAFGENNALLKAAKEEKKQLTARLHQLQSENSTKK SVSIPSRHLHTRTEPPTSKSKRIRPPPSVTRKASHDFPLNIMDQSTSKIVTSTPICNV DYSRRDYMNRMFGAGFEHPSPIPRQ" gene <352987..>356456 /locus_tag="CRE_29472" /db_xref="WormBase:WBGene00064256" mRNA join(<352987..353055,353100..353233,353275..353604, 353657..354066,354267..354351,354627..354666, 354711..354972,355018..355856,355905..>356456) /locus_tag="CRE_29472" /product="hypothetical protein" /db_xref="WormBase:CRE29472" /db_xref="WormBase:WBGene00064256" CDS join(352987..353055,353100..353233,353275..353604, 353657..354066,354267..354351,354627..354666, 354711..354972,355018..355856,355905..356456) /locus_tag="CRE_29472" /note="coded for by the following C. remanei cDNAs: DY525546" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12564.1" /db_xref="WormBase:CRE29472" /db_xref="WormBase:WBGene00064256" /translation="MAGEQLFPDYDADEEDVFGSQSVMTAKRVVVTEQQKADPLRKPK VELQGILVAEKQPISAKEIERRMLDEYGQTIDPKKYGCKTLDELLQVCSDTVVHKRRQ DGVHIYWAKVSEANQDIVEMVQQQHTGHEPKRGARSFLTHGATRGGRGNYGASFRTYR GQSRVPEEDIKTKGNPDQVNARSKLAPAKTIERVHNLAELLRECRAEIGTPHPDQPGR MIVSLGTLMNKFKEVYGLPAWGKNMSESELYKQISVEKYSGVLKFWSLRDGGDYYVED WNSKHLSVSEDQKAPEEPIENEKVISESPSATLQKNINETTIAATSTHDETAADRSIA LGLALDSSFEDFSTISEGSPAAMLISKAADDGFFESGPGFGGNLSTPQTQPNLNVTSS MSDLGQRFGNVSLGRTQPLNENSASSTSASRSGSRLGGAALTGNRQNSGHEVRHRQSS SVQPMRPVSSSFGPRAIIPQNGLQLLVKYVKSRGSTKYESLPEDDQTFVNFNSQLFKV YANQPGEMLVRLVNPSIDPETVKISETNFREPVEADLRWMSEVNMHVKRGLLVVRPVM FVAPRGFLMVACNTSEADLEGEKLGKMEDLLRGVMTAPLQELSRRNARPGMAAVYIYR QGEEVRYYRVLLVGRAQQGDDVLALLADHNDQHMMDVKLSMLYVLPEKASFRRYAPNV YFGTLYGVMALSPVEQENMWKNLDDEDRKNFVAAYIPQDETKILNIDMVWTNENRQYE WLSQLAKRRGAIPSPDSNSNHVTKQPEGAVKRMGEDCFMEFFDFTQQPPEEPNPPAPV IQRDFSQNQNILLLKYNFLETRQLVPEATRTVQPAAIVQPTFFNPRLLNMYAVFDELV ETNNVVGMVKMLETVKIIRNMKQSKSNDDWKELINYMIDAGRRKGIQLEL" gene complement(<356676..>357958) /locus_tag="CRE_29687" /db_xref="WormBase:WBGene00086134" mRNA complement(join(<356676..357276,357414..>357958)) /locus_tag="CRE_29687" /product="hypothetical protein" /db_xref="WormBase:CRE29687" /db_xref="WormBase:WBGene00086134" CDS complement(join(356676..357276,357414..357958)) /locus_tag="CRE_29687" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12569.1" /db_xref="WormBase:CRE29687" /db_xref="WormBase:WBGene00086134" /translation="MTYPTIHTCNPDCKYATIPFPPKYTFKKIPRRFKRYSFLIHILP FLQFKKKMKLLNFPILVQKEIWRSMKVEEVLLLTFCSNRAKNSILQHRKLLFKNTESV CYETNGDVTSNIKVKMTNEWRYLLSFLSEKDFNSSHRNDVVRLEILGLYFQCWYVSIF DFRRFIDKYEISACARVTWTSCLIRLNYAIDPAILEEYLFLSPNQETIQFDINLKSEL EQNSKIYETEHLRVASLGQPTDHFLLNFSGRSLFLENTNVQKETIIECLRAWNSDMRY QNLNFLSIELYDVFTDVRQIMNQFNVKEIEKERNPPVRLFSNISKHFRSFRSFFLSGT YSVELASRRYVVNESNGHVATFSMSNKIFAFAVWRMTEKEFLDKVSS" gap 359576..359585 /estimated_length=10 gene complement(<360224..>361785) /locus_tag="CRE_29688" /db_xref="WormBase:WBGene00064255" mRNA complement(join(<360224..360566,360623..361264, 361700..>361785)) /locus_tag="CRE_29688" /product="hypothetical protein" /db_xref="WormBase:CRE29688" /db_xref="WormBase:WBGene00064255" CDS complement(join(360224..360566,360623..361264, 361700..361785)) /locus_tag="CRE_29688" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12442.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29688" /db_xref="WormBase:WBGene00064255" /translation="MRMTTPFPLFRLPFLPLVKVIKQMGSFQILKLSLCSKVSKFKCQ LIKPAKPLHFTVFFGTEEIRMTVKFENLKPENESKENNARWRLLYVDDMMNTGEFSIT HEFSYLTGNDYYIDVYNSKKYRTTSTYRISIGHFRAEFLKWIDNVIVVFNATLNVLAF DNICQPKVMKWIEERKPSLDKLALDCSFPSVTIRNILNYCHPKNEFYTRCEVFEPSGW TPSSETTKSTHVTNSLDFNDLLKLGVPIINSQCTEFTDNVLNDFLKNWTTSMRKLEYL SVVRTPNNPEINEDTVIEGLDVTRMEQTVRFERGGRTFSFTGYSILNGRGQMAVFGID RWNKKNVAFRFLLSTFLENIQC" gene complement(<362087..>362626) /locus_tag="CRE_29689" /db_xref="WormBase:WBGene00086103" mRNA complement(join(<362087..362268,362311..>362626)) /locus_tag="CRE_29689" /product="hypothetical protein" /db_xref="WormBase:CRE29689" /db_xref="WormBase:WBGene00086103" CDS complement(join(362087..362268,362311..362626)) /locus_tag="CRE_29689" /note="contains similarity to Homo sapiens 52 kDa protein; VG:OTTHUMP00000024537" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12359.1" /db_xref="WormBase:CRE29689" /db_xref="WormBase:WBGene00086103" /translation="MISNVVNILSATRRIRSPEIEEEESSITPEPEEEPMRSQESEED PRLGGVHEEARMGRGAHSPQPDEDPESEEESRIRGGVQNQRKSPESEGSTRSPRRSQN RRRRGAHEKPTVGGAVRIRGGGEESRRSPRGAESEEEPRIGGIHKEPSIGRGTRSREL EDIED" gene complement(<363299..>364291) /locus_tag="CRE_29690" /db_xref="WormBase:WBGene00086143" mRNA complement(join(<363299..363491,363532..364098, 364152..>364291)) /locus_tag="CRE_29690" /product="hypothetical protein" /db_xref="WormBase:CRE29690" /db_xref="WormBase:WBGene00086143" CDS complement(join(363299..363491,363532..364098, 364152..364291)) /locus_tag="CRE_29690" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12640.1" /db_xref="WormBase:CRE29690" /db_xref="WormBase:WBGene00086143" /translation="MISINTGDDDLKPVVSFSSEDLILIRAVRDGIEVIPINVFGISS FCCMRSGYFEIMANESNIQTLLLSFYNYVHEFLGPSPEYQLSVEPEGFLPKIKNVNVT KLHFRQCPRANVLEEYFSCSPNQECVFFKTWAQFEFIPQSKICDTNNLKFDCLGQPTD QILTDFNGRSLVLELTSIKESTIIEFVNQWRSNRKYQNLEFVHINLFRESYEDPLELM EEIGVKENGLAVYHFKNRLDIESKSITSIKQKSWHYVVNESTGHVATISIGTDQFHFA AWRITEKEFLVGHPIPKVPSNDA" gene <365505..>369542 /locus_tag="CRE_29473" /db_xref="WormBase:WBGene00064254" mRNA join(<365505..365549,365599..365694,365870..366373, 366501..367859,368754..368836,368884..369002, 369469..>369542) /locus_tag="CRE_29473" /product="hypothetical protein" /db_xref="WormBase:CRE29473" /db_xref="WormBase:WBGene00064254" CDS join(365505..365549,365599..365694,365870..366373, 366501..367859,368754..368836,368884..369002, 369469..369542) /locus_tag="CRE_29473" /note="contains similarity to Pfam domain PF00249 Myb-like DNA-binding domain; contains similarity to Interpro domains IPR001005 (SANT, DNA-binding), IPR012287 (Homeodomain-related), IPR014778 (Myb, DNA-binding), IPR015495 (Myb transcription factor); coded for by the following C. remanei cDNAs: DY526080, DT934109, DT937518, DY527932, DR776764" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12720.1" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR014778" /db_xref="InterPro:IPR015495" /db_xref="PFAM:PF00249" /db_xref="WormBase:CRE29473" /db_xref="WormBase:WBGene00064254" /translation="MVRVIIKGGVWKNTEDEILKAAIMKYGKNQWSRIASLLHRKSAK QCKARWFEWLDPGIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTSAQCLERYEH LLDEAQRKAEGLDEEATEARKLKPGEIDPTPETKPARPDPIDMDDDELEMLSEARARL ANTQGKKAKRKARERQLSDARRLASLQKRREMRAAGLAFARKFKPKRNQIDYSEEIPF EKHVPAGFHDPSDDRYVVEDANQRAIDDHQKPRGREIEMEMRREDREKLKKRKEQGEA DAVFNIKEKKRSKLVLPEPQISDRELEQIVKIGHASDSVRQYIDGTATSGLLTDYTES ARANAVAARTMRTPMPKDTIQMEIENIIALQNTESVLKGGLNTPLHESELGKGVLPTP KIVATPNTVLHAIAATPGTQSQIPGATPGVFATPGSVAATPFRDQMRINEEIGGSSLE QKANLKRALASLPTPKNDFEIVGPDDDEVEGAVEDDNDQEDAEWVEDASERSEKHAKR NAEIRIRNLKMRTQVVQRSLPKPSKINESATRPTNASGDLPKADDMIKLEMSRLLAWD VDNKAPEVVYSREDLDEAAELIKKEADAGPELNAMMWKVVEQCTSEMVLSKDKFTRIA ILPREEQMKALNDEFQMYRGWMNQRAKRAAKIEKKLRVKLGGYQAIHDKLCKKYQEVS NEIEMANIEKKTFERLGEHELKAINKRVGRLQQEVKTQEAREKDLQKTYSKLSNKQWK LSQIEIHDSASTTAAPIAY" gene complement(<371033..>374981) /gene="Cre-ceh-6" /locus_tag="CRE_29691" /db_xref="WormBase:WBGene00064253" mRNA complement(join(<371033..371218,371618..371719, 371767..371901,372030..372132,372902..373350, 374829..>374981)) /gene="Cre-ceh-6" /locus_tag="CRE_29691" /product="CRE-CEH-6 protein" /db_xref="WormBase:WBGene00064253" CDS complement(join(371033..371218,371618..371719, 371767..371901,372030..372132,372902..373350, 374829..374981)) /gene="Cre-ceh-6" /locus_tag="CRE_29691" /note="contains similarity to Pfam domains PF00157 (Pou domain - N-terminal to homeobox domain), PF00046 (Homeobox domain); contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR013847 (POU), IPR000327 (POU-specific), IPR001356 (Homeobox); coded for by the following C. remanei cDNAs: DR407998" /codon_start=1 /product="CRE-CEH-6 protein" /protein_id="EFP12582.1" /db_xref="InterPro:IPR000327" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR013847" /db_xref="PFAM:PF00046" /db_xref="PFAM:PF00157" /db_xref="WormBase:CRE29691" /db_xref="WormBase:WBGene00064253" /translation="MLIPSTSSSTSSSSSESSSESISLPLLADQNLLPNYHLHHHLAE MEANYAQVIKPTCEAFQEWPVYHQPQIQFMIPPHDWGYAHLAAPAFQPHHSLSTPSSA AVAAATIASQSTVLPQTSVVTSTPPCLMKQEMKQEIERPEIIQRLMPPWPPYQFSCDD NVGPGGNQQSISDISDDSEQTCPDDLEGFAKQFKQRRIKLGYTQADVGVALGTLYGNI FSQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGSPNSTFEKMTGQAGRKRKKR TSIEVNVKSRLEFHFQANQKPNAQEIGQVAMELQLEKEVVRVWFCNRRQKEKRIAPNQ YDGPHPMSLQNGYPMPTDLFPYQAVVSHYAQQSPSLNQQQQ" gene complement(<381813..>385921) /locus_tag="CRE_29692" /db_xref="WormBase:WBGene00064252" mRNA complement(join(<381813..382184,382955..383134, 383186..383282,383330..383418,385204..385431, 385479..385574,385623..385688,385769..>385921)) /locus_tag="CRE_29692" /product="hypothetical protein" /db_xref="WormBase:CRE29692" /db_xref="WormBase:WBGene00064252" CDS complement(join(381813..382184,382955..383134, 383186..383282,383330..383418,385204..385431, 385479..385574,385623..385688,385769..385921)) /locus_tag="CRE_29692" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12714.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE29692" /db_xref="WormBase:WBGene00064252" /translation="MTIFGGGQQKQAPLIGDSGIPAYCLKKIGSRHILVAGGGGASKT GVQNEIQTHLFTTGSANKDVGFQAQLVDTFDTGSMATMNMDVACAVDENAAKYVIAAG QDDNCVLYMTRKFRLNELENDSLCFEISKVAQVRSDYHSTSAYQKCVRFDKNSRGKIF ATGGADGYIRLWDAQVVFRAENENAQPVLKIQAHKADVDDIDFSSDSNSIISVGAEGA FLWSKQTGERLLDLQFPIEIARGFKMRSARCTPLGNANGNTVFVAAYNSISRGSKDQA CYLSLWTFNSQRKVARPIVTKLIAKNQAISSLAVSDCGNYTAVGTMSGGVGVFDTHEF RRLYFAPESHGLFVTGIEFVSKVAPSNCEDIRQETPGIASGFHCAVVTLAADKTMQLH RVPHAQPQPFSEFLFIISFISLIFTWLASFLIVV" gene <387910..>391677 /gene="Cre-axl-1" /locus_tag="CRE_29474" /db_xref="WormBase:WBGene00064251" mRNA join(<387910..387981,388842..389042,390113..390232, 390287..390336,390385..390510,390715..390879, 390926..391002,391082..391166,391245..391394, 391527..>391677) /gene="Cre-axl-1" /locus_tag="CRE_29474" /product="CRE-AXL-1 protein" /db_xref="WormBase:WBGene00064251" CDS join(387910..387981,388842..389042,390113..390232, 390287..390336,390385..390510,390715..390879, 390926..391002,391082..391166,391245..391394, 391527..391677) /gene="Cre-axl-1" /locus_tag="CRE_29474" /note="contains similarity to Interpro domains IPR001158 (DIX), IPR000342 (Regulator of G protein signalling)" /codon_start=1 /product="CRE-AXL-1 protein" /protein_id="EFP12413.1" /db_xref="InterPro:IPR000342" /db_xref="InterPro:IPR001158" /db_xref="WormBase:CRE29474" /db_xref="WormBase:WBGene00064251" /translation="MTMRSKSFSERILRNASFIKWCQKEESRNADSIALYTSILEFES KLKSGSPSLSLLKLARHIHRKYVSLNTGTCHVIDDSTRTEMSKRVHEVLDGKPPYVEL FDPLKQPLFQHLKSMHTEYSTTTADINTTWEDASSTSSSNKGAMIWFNDDAIDRSSRH EIGQNTVTHESEDDRFAFFNAVCTRLNSLQETKNSSETEESPEKPKSSSSSNPYGNDG FAPPPHSTHTNTMKVSNLPKRFESLYKKKRQQNVTSDSSGFGSNASDFWSFERYGKSN HGTLERPNRLFPGSNNGFSTLQHKKRSPEVQKLTVELRYENDVPMIAKISANQSVTLR YFRHLFGLHYTDSCRFFFKSMCEDGSAQYQWTLLFQDDDILPVFQNRITAICRMCPPP EEHHLI" gene complement(<391805..>392676) /locus_tag="CRE_29693" /db_xref="WormBase:WBGene00064250" mRNA complement(join(<391805..391993,392037..392176, 392218..392395,392449..392555,392604..>392676)) /locus_tag="CRE_29693" /product="hypothetical protein" /db_xref="WormBase:CRE29693" /db_xref="WormBase:WBGene00064250" CDS complement(join(391805..391993,392037..392176, 392218..392395,392449..392555,392604..392676)) /locus_tag="CRE_29693" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12576.1" /db_xref="WormBase:CRE29693" /db_xref="WormBase:WBGene00064250" /translation="MTEITKTLNKCERPQNSKIDISFCELSMEDESNLQDLIDECSSL KIANTFSKSRFSRIFEKPKNRLEKLELICVDFRDESQIISIFKSCQSLKTLNLSGIRV ASSTTSFMDPQLPAAIIALPHLVNLDLSFNSSWISEQNWNQLLKELEKLEELAMNETK CDVQFESDWLPHLSIFSARGSDLHWDSIFEMLSVSDRITRVDVRFSTIDSSLPEELQK GNLRIGDILY" gene <393576..>394177 /locus_tag="CRE_29475" /db_xref="WormBase:WBGene00064249" mRNA join(<393576..393639,393699..394001,394137..>394177) /locus_tag="CRE_29475" /product="hypothetical protein" /db_xref="WormBase:CRE29475" /db_xref="WormBase:WBGene00064249" CDS join(393576..393639,393699..394001,394137..394177) /locus_tag="CRE_29475" /note="contains similarity to Schistosoma mansoni Putative eggshell protein (Fragment).; SW:P08016" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12544.1" /db_xref="WormBase:CRE29475" /db_xref="WormBase:WBGene00064249" /translation="MASYSSLLVLSVCTIGALAVMEHNSYYPGGHSTSYYQPYQTHTY GSKYYNTESYGKYDEHGNNGKDSHYEPSYYNPIASYYHSYMPKYQGGHNDYYTKYNQY TPYYGGNNHQQNYYEQPKHDDYHGGDHHFNMHK" gene <395861..>396767 /locus_tag="CRE_29476" /db_xref="WormBase:WBGene00064248" mRNA join(<395861..395924,396230..396328,396574..>396767) /locus_tag="CRE_29476" /product="hypothetical protein" /db_xref="WormBase:CRE29476" /db_xref="WormBase:WBGene00064248" CDS join(395861..395924,396230..396328,396574..396767) /locus_tag="CRE_29476" /note="contains similarity to Schistosoma mansoni Putative eggshell protein (Fragment).; SW:P08016" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12661.1" /db_xref="WormBase:CRE29476" /db_xref="WormBase:WBGene00064248" /translation="MYFRLSLFVLAVCASTAFAMFDHGPKYGGHQFKPVYLNPYGNKY ESYGKHDDHKDSHYQPSYYHESYQPKYEGHDQKYGNDYYSSYQPSHQPYYGSSYYNEQ PKYNDYHNSQHYYDKY" gene <397203..>397751 /locus_tag="CRE_29477" /db_xref="WormBase:WBGene00086152" mRNA <397203..>397751 /locus_tag="CRE_29477" /product="hypothetical protein" /db_xref="WormBase:CRE29477" /db_xref="WormBase:WBGene00086152" CDS 397203..397751 /locus_tag="CRE_29477" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12683.1" /db_xref="WormBase:CRE29477" /db_xref="WormBase:WBGene00086152" /translation="MVQLRKITRVVVPGGTKQPEGRCTSDESSNFTFRHYAAWTPADP RAFLTPVSQSKTGHLKDFVAPRIGRQSRPTKKTEYTVRFFQKNIIHSSTGQRRPLMET PVADTNIVPTLPPHCKAESRTLRTTLCNQQGQRNQGAAPLLLAGSLSLHRETSNSGMP PGQTKTCGRQSTTPTSSNGRLQ" gene complement(<398045..>402916) /locus_tag="CRE_29694" /db_xref="WormBase:WBGene00064247" mRNA complement(join(<398045..398237,398309..398485, 398812..399048,399394..399536,399585..399726, 399838..400130,400558..400986,401028..401172, 401220..401412,401460..401580,401659..401803, 401851..401936,401991..402340,402778..>402916)) /locus_tag="CRE_29694" /product="hypothetical protein" /db_xref="WormBase:CRE29694" /db_xref="WormBase:WBGene00064247" CDS complement(join(398045..398237,398309..398485, 398812..399048,399394..399536,399585..399726, 399838..400130,400558..400986,401028..401172, 401220..401412,401460..401580,401659..401803, 401851..401936,401991..402340,402778..402916)) /locus_tag="CRE_29694" /note="contains similarity to Pfam domain PF00023 Ankyrin repeat; contains similarity to Interpro domain IPR002110 (Ankyrin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12663.1" /db_xref="InterPro:IPR002110" /db_xref="PFAM:PF00023" /db_xref="WormBase:CRE29694" /db_xref="WormBase:WBGene00064247" /translation="MNKKEKEARKLLHAGNFKDAVDKLNEAGLELHRAGDSDKAIEVL EEGSKIALQYGKLQYERSFCERALSEIHADLGNKEQCLRHIQKFRTLSKECKDKSQEQ LSYHVEAWCLQQLFLNGKAERTDLEEAIKKTKESRNFVKKHEKEFKPDGVGGPPHKRK ADLYTLEAQLQHQLGNTKEAMNLLAKTAQCLKSNDKSTKFEMLRTKCSVAPVSQRIDI AELMDDDAPEEKKAQALTELSHQYVLGKMLERGYKALAHALIMHQKQFGRDDLQDSVK RLCILYRLVKYSEILKSNKKSKQYSLCQLHEAIGDLYDKYYQTLLETEKKEYRQFLKE NILQNYEKMLEFKRNDEDVLRANLAIALVYWDLEEYSKSRKIFEQRLELLEKIGASED KILDTRVSIFNCKTKINFPGLEREFDVLKNAVEPFNNTKRELYEVWANYWSDKNDEEQ ATIWRDAAETVPEVLIRNQDDETDFLFFEYSDDDILEKCRDENELLKLDRLTDYQLTK TNSKGETLLHLAAMKSDNHRVVGKLCSLGSKVDAKDNGGWTPLMEAVANNQCGNVKVL IRFGADVNAKSIQSFECDSPEEINHGNLTPLMDACTNGYIEIAQILIDNKARVDLRDK SGWTAYHHLKQHIEDKEVTDEETLKFAEYLRTVTQNYGPLVDIPVCNIKTSANRLNQE SDDSPPDDVEDGIILGMAASRKRKFSSEYENSRNLNKRKQRSGENMRMSPPLVHIPQK RNIQPSSSYVQPRKIYRQTSSSSLTSNPRYSMSPRRSMSPSGTIRSAPSVYAGDDDIQ VVGVRRSFDRPQVQIAPKLPSPAFVHQRFVPSPRQQFDLNSSEIVVKCCFQLPAGSGD EIRPEKLPMKRTMSISEVKTTVISRIPAISQFKIKAVWNKDDEDKCGVDELTLTQVAD KPNQREVALVFDLGAP" gene complement(<403263..>405374) /locus_tag="CRE_29695" /db_xref="WormBase:WBGene00064246" mRNA complement(join(<403263..403507,403767..403900, 403947..404179,404222..404324,404371..404576, 404932..405103,405149..405258,405315..>405374)) /locus_tag="CRE_29695" /product="hypothetical protein" /db_xref="WormBase:CRE29695" /db_xref="WormBase:WBGene00064246" CDS complement(join(403263..403507,403767..403900, 403947..404179,404222..404324,404371..404576, 404932..405103,405149..405258,405315..405374)) /locus_tag="CRE_29695" /note="contains similarity to Pfam domain PF01412 Putative GTPase activating protein for Arf; contains similarity to Interpro domain IPR001164 (Arf GTPase activating protein); coded for by the following C. remanei cDNAs: DT937465, DY528831" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12507.1" /db_xref="InterPro:IPR001164" /db_xref="PFAM:PF01412" /db_xref="WormBase:CRE29695" /db_xref="WormBase:WBGene00064246" /translation="MASPRTRRTLKELRPLDDNNFCFECEANNPQWVSVSYGIWICLE CSGVHRSLGVHLSFVRSVTMDKWKDIELAKMKAGGNRKFAEFLQSQPDYKEKWTIQEK YNSKAAALFRDKVASEAEGREWSQSTSPANNYVPPTLGGMGARTNSGTSKSSGNSSLG SYYGGNSSYSQSGGDGSYSAQDASSKYQGFGNTGYVPNQQQNNGDDLLAGAMSGLSMG WSMLSKGASQAAAIAKEAGIQAQQKASQLSENVSQNNSIFGGVASKASEVGTKSWDGL SQFVKSPSLNAFSGILSKTGYEDFGGGGGGMSGSSSQNEFNDWLKQSNLPRGTTEGAN HFGSEELKPTEPVETRKKKDRSPKPAPKKVVAETVEEDDTSSSTIAQFESSFNKPKPA PTRAAAPAPKKQEKEKGWDDDAWDLLNQ" gene complement(<405933..>407045) /gene="Cre-zhp-3" /locus_tag="CRE_29696" /db_xref="WormBase:WBGene00064245" mRNA complement(join(<405933..406160,406249..406317, 406370..406637,406686..406867,406914..>407045)) /gene="Cre-zhp-3" /locus_tag="CRE_29696" /product="CRE-ZHP-3 protein" /db_xref="WormBase:WBGene00064245" CDS complement(join(405933..406160,406249..406317, 406370..406637,406686..406867,406914..407045)) /gene="Cre-zhp-3" /locus_tag="CRE_29696" /codon_start=1 /product="CRE-ZHP-3 protein" /protein_id="EFP12603.1" /db_xref="WormBase:CRE29696" /db_xref="WormBase:WBGene00064245" /translation="MSPGVKAYFADPVKAITEKLTRLQRKFEFQGNMRVHLLKHLIKE KEKKRQMESYFRKKGQEFEAQKKKLAEANAWIQTAERKLQASEEEKQKVQREMEELQE KLKNLSTSIHSQHHTSNPTQFSFMPEESQEPGIAPSVVNSTPNSTFDLVSPLVISPAP SLNSSNFHTFFENGNVASNGSEAAFNDDLMFNTMSSGQSVRGANLSNSSAFSVAFNNM FTPTRNLDATTHSMANQTAVNQTIMDKTSMSLDNWRASKSNSFGTHDMYVHMSFSPSN FLIPGPKERHLSLWAM" gap 407316..408218 /estimated_length=903 gene complement(<408948..>410531) /gene="Cre-gpa-15" /locus_tag="CRE_29697" /db_xref="WormBase:WBGene00064244" mRNA complement(join(<408948..409138,409192..409345, 409445..409574,409621..409749,409826..409986, 410176..410317,410368..>410531)) /gene="Cre-gpa-15" /locus_tag="CRE_29697" /product="CRE-GPA-15 protein" /db_xref="WormBase:WBGene00064244" CDS complement(join(408948..409138,409192..409345, 409445..409574,409621..409749,409826..409986, 410176..410317,410368..410531)) /gene="Cre-gpa-15" /locus_tag="CRE_29697" /note="contains similarity to Pfam domain PF00503 G-protein alpha subunit; contains similarity to Interpro domains IPR001019 (Guanine nucleotide binding protein (G-protein), alpha subunit), IPR011025 (G protein alpha subunit, helical insertion)" /codon_start=1 /product="CRE-GPA-15 protein" /protein_id="EFP12620.1" /db_xref="InterPro:IPR001019" /db_xref="InterPro:IPR011025" /db_xref="PFAM:PF00503" /db_xref="WormBase:CRE29697" /db_xref="WormBase:WBGene00064244" /translation="MGSTCSTPEYKEQIRINSIIDKQLRKDEDSEIGNQKLLLLGTGE CGKSTILKQINILHSSGYTKTDLKNVAGSVYSNIIQGMATLLKAKDTFLYDLSSAELD ADAQHILALAESSKDAMPFIPLTFNAIKRLWHDPMVQKTFDRRAEFQMMDTLVYFMNE LDRINDPDYIPTVDDMLRIRIPTMGVVQQVIEIKGTKFRIYDVGGQRSERRKWIHLFD NVNATIFISAINEFNQKLNEDGTSNRMKESIKLFETICNSRWFVNAAMILFLNKRDLF EQKLKTTNINVLFSTYAGTNDYAECVAYITMRFERLNKYAEQKKIYTHVTCATDTNQI QLVIDSVVDMVIGRNLRGTGME" gene complement(410610..410681) /locus_tag="CRE_32236" /db_xref="WormBase:WBGene00186644" tRNA complement(410610..410681) /locus_tag="CRE_32236" /product="tRNA-Ala" /db_xref="WormBase:CRE32236" /db_xref="WormBase:WBGene00186644" gene complement(<418165..>419929) /locus_tag="CRE_29698" /db_xref="WormBase:WBGene00064243" mRNA complement(join(<418165..418276,419442..>419929)) /locus_tag="CRE_29698" /product="hypothetical protein" /db_xref="WormBase:CRE29698" /db_xref="WormBase:WBGene00064243" CDS complement(join(418165..418276,419442..419929)) /locus_tag="CRE_29698" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12672.1" /db_xref="WormBase:CRE29698" /db_xref="WormBase:WBGene00064243" /translation="MGSRNRLVVDFQRNYIEFNGAKYCIKDDSTNKFHGESIKFGDLE TPIYRCNDRVTHVFWRNDQLLKAVMTIAGHFIKTSNLTSIFQVLVSDNHPVIQIIDWI QIQNFGSTEDVKIDNFSLIDCQPEEKNEVAKLLYSDEFLQKITNNFTSLLQGFQVAPA LSVLIDGNEENTFEIKGNDDLIAEIAIPEDGRSFKLFIA" gene complement(<421905..>423497) /locus_tag="CRE_29699" /db_xref="WormBase:WBGene00064242" mRNA complement(join(<421905..422157,422944..422975, 423029..423121,423399..>423497)) /locus_tag="CRE_29699" /product="hypothetical protein" /db_xref="WormBase:CRE29699" /db_xref="WormBase:WBGene00064242" CDS complement(join(421905..422157,422944..422975, 423029..423121,423399..423497)) /locus_tag="CRE_29699" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12344.1" /db_xref="WormBase:CRE29699" /db_xref="WormBase:WBGene00064242" /translation="MTRVRPTIVEVSDATTSKFHTKGIEALVTMAAKLFGAVSRKLER RQSTSSSDESIESGMVPNVNLPAYTQSSTRKLAFGTAATEEHKPLDDFYNNSTLTNIS KLFCAVVLLTAFFLVMSRSLQFAYEAQQAAARAANPPIVSTSNSTSLSSLFDLSSS" gene complement(<428507..>447865) /gene="Cre-gon-2" /locus_tag="CRE_29700" /db_xref="WormBase:WBGene00064240" mRNA complement(join(<428507..428641,428868..429149, 429213..429462,429515..429973,430062..430194, 430245..430386,430436..430499,430548..430707, 430758..431077,431128..431252,431301..431501, 431551..431627,431677..431790,432492..433810, 433934..434151,434202..435199,435247..435331, 435380..435622,435693..435965,441300..441448, 441999..442113,444089..444224,445708..445766, 445819..445884,447836..>447865)) /gene="Cre-gon-2" /locus_tag="CRE_29700" /product="CRE-GON-2 protein" /db_xref="WormBase:WBGene00064240" CDS complement(join(428507..428641,428868..429149, 429213..429462,429515..429973,430062..430194, 430245..430386,430436..430499,430548..430707, 430758..431077,431128..431252,431301..431501, 431551..431627,431677..431790,432492..433810, 433934..434151,434202..435199,435247..435331, 435380..435622,435693..435965,441300..441448, 441999..442113,444089..444224,445708..445766, 445819..445884,447836..447865)) /gene="Cre-gon-2" /locus_tag="CRE_29700" /note="contains similarity to Pfam domain PF00520 Ion transport protein; contains similarity to Interpro domain IPR005821 (Ion transport)" /codon_start=1 /product="CRE-GON-2 protein" /protein_id="EFP12512.1" /db_xref="InterPro:IPR005821" /db_xref="PFAM:PF00520" /db_xref="WormBase:CRE29700" /db_xref="WormBase:WBGene00064240" /translation="MMSDLDEDDEHSACQDVDDIVIYVPEFAGYREVNIDTAISLCPT PPPARNKSPNRNLEMRRRFDKIRREKKEERKLLADEKEYDEEDDVFEEGEGLQMRTFE PKASHRNSDESMPSVLPRTAQMKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGYAIPP PNIHSADWRDMLAITDNKDDKLMKTLGVTRYLQPKGGDQTAPTTSTTTIGGDVGPTTT QTQAQTMNGASGGGQQASTSGVSPGDRSNGDVSVTATSGQLVLPIPLFSQMRFTESNM SLNRHNWIKETFTRRECSRFIPSSRDLKKCGCGRSHDAHRNIPELTSEFLRQKRSVVA LEHQRAASTFDNDDINTQNNMYTKRGANEKWSLRRHTVSLATNAFGQVEFQGGPHPYK AQYVRVNFDTEPAYIMSLFEHVWQISPPRLIITVHGGTSNFDLQPKLARVFRKGLLKA ASTTGAWIITSGCDTGVVKHVAAALEGAQSAQRNKIVCIGIAPWGLLKKREDFIGQDK TVPYYPTSSKGRFTGLNNRHSYFLLVDNGTVGRYGAEVILRKRLEMYISQKQKIFGGT RSVPVVCVVLEGGSCTIRSVLDYVTNVPRVPVVVCDGSGRAADLLAFAHQNVTEEGLL PDDIRRQVLALVETTFGCSEAAAHRLLHELIVCAQHKNLLTIFRLGEKGEHDVDHAIL TALLKGQNLSASDQLALALAWNRVDIARSDVFAMGHEWPQQALHNAMMEALIHDRVDF VRLLLEQGINMQKFLTISRLDELYNTDKGPPNTLFYIVRDVVRVRPGYRFKVLSNIPN FLVFRLPDIGLVIEKLMGNSYKCSYTTSEFREKYKQRIKKFKNLQKKAMDNFLNRTSA GGSGLASRQSTERLGGIVANSSVAGVFGNSFNAQDPMCDPVSRSALSGSRALSNHILW RSAYRGNFPSNPMRPPNLGDSRDCQSEFEEEISLTQSSEGSQVEADFRYPYSELMIWA VLTKRQEMAMCMWQHGEEAMAKALIACRLYKSMSTEAAEDYLEVEICEELKKYAEEFR QLSLELLDHCYHVDDAQTIQLLTYELSNWSNETCLALAVIVNNKHFLAHPCCQILLAD LWHGGLRMRTHSNFKVMIGLICPPFIQLLEFKTREELLNQPQTAAEHQNDMNYSSSSS SSSSSSSSSSSSSDASSFEDDDEENQDQKRTRKNSQGSVQSMTIANLFQSRRRKTKKE TDASGGEIGVKPHMNGGLAAEYGTFGEQNRASPPPPYLRNRSRYASNHNRSDMSKTSS VVFGSDPNLTKLQKSNLTSTDRPNPMEQFQGTRKLKMRRRFYEFYSAPITTFWSWTLS YAFFIILFTYTLLVKTPERPTVVEYLLIAYVGAFGLEQLRRIIMSDAKPFREKIRTYL CNFWNCVTISAIIIYIIGFILRVAGKDRTVQWGRVILACDSVLWTLKILDYLSVHPKL GPYVTMAGKMIQNMSYIIVMLCVTLLSFGLARQSITYPNEEWHWILVRNIFLKPYFML YGEVYADEIDTCGDEAWDRHLENDTPLILGNGTNGYSCVPGYWIPPLLMTFFLLIANI LLMSMLIAIFNHIFDATDEMSQQIWLFQRYRQVMEYESTPFLPPPLTPIYHVWMLFQF VRLKFSRVKAVERDPMFDFSLKLFLDRDQIEKLHDFEEDCMEDLARQKMNEKNTSNEQ RILRADIRTDQILNRLIDLQAKETMGRDALNDVEARLASVEKTQNEILDCVRALLNQN TMPMMGRCLSPSPESVTGTPGPMLLKLPGSDPIIEEHDHESVENNSLPPGPIRRNRTA TICGGYVSEERNMMLLSPKPSDVSGIPQQRLLSVASMDPLPGPKLSTMSVRRRHEEYT SITDSIAVRNPERRLRNNRSNSSDHDESAIDSDGGDNTISSPRKRSTRDLRMNPNSQG EESISREQVYETDRPEHEEEDEAQADCELTDAITEEEEDEEDEEIEGDDDDDDGHHHH HHHHHHHRSHPERKQSGLRQNRPPSHTLETDLSDGEIEEEIQMEMKGLPVLHQIINEE EAVAAPHSTPVIVSPSTSQATLSSPEKKPSTHQQ" gene complement(<448523..>449713) /locus_tag="CRE_29701" /db_xref="WormBase:WBGene00064238" mRNA complement(join(<448523..448699,448750..448919, 448970..449099,449150..449234,449279..449445, 449495..>449713)) /locus_tag="CRE_29701" /product="hypothetical protein" /db_xref="WormBase:CRE29701" /db_xref="WormBase:WBGene00064238" CDS complement(join(448523..448699,448750..448919, 448970..449099,449150..449234,449279..449445, 449495..449713)) /locus_tag="CRE_29701" /note="contains similarity to Pfam domain PF00291 Pyridoxal-phosphate dependent enzyme; contains similarity to Interpro domains IPR000634 (Serine/threonine dehydratase, pyridoxal-phosphate-binding site), IPR001926 (Pyridoxal phosphate-dependent enzyme, beta subunit)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12339.1" /db_xref="InterPro:IPR000634" /db_xref="InterPro:IPR001926" /db_xref="PFAM:PF00291" /db_xref="WormBase:CRE29701" /db_xref="WormBase:WBGene00064238" /translation="MTTEISIDEMRAAHKRTALFIHNTPMMKSEKIDEKVGANVLFKC EHLQKTGSFKARGALNSAILAKEQNAKGVIAHSSGNHGQALAWSAQKIGLPCTIVVPK NAPNSKVEGMKEYNAEIVLCEPTMASRESVCSELGEKRDMFYVDPHNCVSMINGHASL VFEVLEQAGDKIDSIFLSVGGGGFAASVAYSIGILRPDIEVYLVEPEEKQLSNLLENG VQCNVDTLNTMADGVRVAHVGSLCEPILKKYCTRTVVSVKEDEIKEALKLIWTRMKQR IEPTAALAFAGVLYHKPAHIKNPLVILCGGNVDTNYIIN" gene complement(<450323..>455849) /gene="Cre-rskn-1" /locus_tag="CRE_29702" /db_xref="WormBase:WBGene00064237" mRNA complement(join(<450323..450395,450629..450771, 450822..453104,454138..454254,455751..>455849)) /gene="Cre-rskn-1" /locus_tag="CRE_29702" /product="CRE-RSKN-1 protein" /db_xref="WormBase:WBGene00064237" CDS complement(join(450323..450395,450629..450771, 450822..453104,454138..454254,455751..455849)) /gene="Cre-rskn-1" /locus_tag="CRE_29702" /note="contains similarity to Pfam domains PF00069 (Protein kinase domain) (2), PF00433 (Protein kinase C terminal domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000961 (Protein kinase, C-terminal); coded for by the following C. remanei cDNAs: DT936938, DR408829, DR407591" /codon_start=1 /product="CRE-RSKN-1 protein" /protein_id="EFP12665.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="PFAM:PF00433" /db_xref="WormBase:CRE29702" /db_xref="WormBase:WBGene00064237" /translation="MPLAQLGEPFGITPAAIENVSPGIDQCKDHRIDVSMRSEPSDCS SDATNTFHSSIHVIHPSSNNGFRTSNGKLIPFFARTFFPISCWENECKKWKMSSITFS NFFPFFPEGVSMVTRHFILRHLDLCRSLFPDFHFSPRKQRLKYSNQTREMVIKTRKIC YFQVNPISIPFIFQTESTLETEIDIGDVRKCGEKADPRQFELLKVLGQGSFGKVFLVR KVRGRDSGHVYAMKVLKKATLKVRDRQRTKLERNILAHISHPFIVKLHYAFQTEGKLY LILDFLRGGDLFTRLSKEVMFTEDDVKFYLAELTLALEHLHSLGIVYRDLKPENILLD SDGHIKVTDFGLSKEAIDSEKKTYSFCGTVEYMAPEVINRRGHSMAADFWSLGVLMFE MLTGHLPFQGRDRNDTMTQILKAKLSMPHFLTQEAQSLLRALFKRNSQNRLGAGPEGV EEIKRHAFFAKIDFVKLLNKEIDPPFKPALSTVDSTSYFDPEFTKRTPKDSPALPASA NGHEIFRGFSFVSNAVIEERKLIQKPIRSIPTAKTQPFTDDYEILEKIGNGAHSVVHK CQMRATRRRYAVKIVKKAVFDATEEVDILLRHSHQQFIVKLFDVYEDETAIYMVEELC EGGELLDRLVNKRALGSEKEVAAIMSNLLFAVQYLHSHQVAHRDLTAANILFASKDGD PSSLRIVDFGFAKQSRAENGMLMTPCYTAQFVAPEVLRKQGYDRSCDVWSLGVLLHTM LTGFTPFAMGPNDTPDQILQRVGDGKISMTHPVWESISEDAKDLVKKMLDVDPNRRVT AKQAVQHKWFGHKETLPDRPIQEVKGEPLDMTDVKTCLNQTYKAMSSAPSVTLRPVGS SALAKRRMKDIIYANYAKNVSANAYCRMDHTLSPTRPPVTKMFCRTKL" gene <460073..>462819 /locus_tag="CRE_29478" /db_xref="WormBase:WBGene00064236" mRNA join(<460073..460156,460288..460509,460726..461055, 461577..461966,462014..462130,462583..>462819) /locus_tag="CRE_29478" /product="hypothetical protein" /db_xref="WormBase:CRE29478" /db_xref="WormBase:WBGene00064236" CDS join(460073..460156,460288..460509,460726..461055, 461577..461966,462014..462130,462583..462819) /locus_tag="CRE_29478" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12367.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CRE29478" /db_xref="WormBase:WBGene00064236" /translation="MEKKKSKTNLLQKFAEKFKKKKRSKSASMSRERGSEMSRRPRRP SRSASKTKVSGGNKEGGSPNASAETKSKIDLLEVTAKGIKSKESKEKKSSGEKKKEKQ NIPTPTKTPSTMALRRTDSQMEVSQNNRCVEKQMKIWIDSLEKMDIRKVLETEYEGIE KMKADAEKCQVFEKKLDQCSSESIELLDANRVKGGGEDKDFFYHGSVLNCPTTPPKTT ILAQLPLIDNAESLESFWLMVAAQKIQRIYVLAGEEEFDKKQLSDYFPDDFKEHKTIR VNHRKTLPKTDDQLNNQLYYEVVPKDCAEAPFCMVEICDFWDDGRVPVKDYARIATTA ASVFDSDIDADASCGIVSFYGAGRTGAFLVGALAIEKLRSGEQPNYKDLGTCIRSQRP GAIEVLSQYIFSHTIGLTYGMKHCKDAGLKTRIEKLIAQFETLACAKMAEEEEEDSSS NATNSNTCE" gene complement(<464003..>466375) /gene="Cre-daf-8" /locus_tag="CRE_29703" /db_xref="WormBase:WBGene00064235" mRNA complement(join(<464003..464196,464246..464529, 464637..465017,465064..465308,465538..466029, 466346..>466375)) /gene="Cre-daf-8" /locus_tag="CRE_29703" /product="CRE-DAF-8 protein" /db_xref="WormBase:WBGene00064235" CDS complement(join(464003..464196,464246..464529, 464637..465017,465064..465308,465538..466029, 466346..466375)) /gene="Cre-daf-8" /locus_tag="CRE_29703" /note="contains similarity to Pfam domains PF03166 (MH2 domain), PF03165 (MH1 domain); contains similarity to Interpro domains IPR013019 (MAD homology, MH1), IPR001132 (SMAD domain, Dwarfin-type), IPR017855 (SMAD domain-like), IPR013790 (Dwarfin), IPR003619 (MAD homology 1, Dwarfin-type); coded for by the following C. remanei cDNAs: DT935415, DY527187" /codon_start=1 /product="CRE-DAF-8 protein" /protein_id="EFP12574.1" /db_xref="InterPro:IPR001132" /db_xref="InterPro:IPR003619" /db_xref="InterPro:IPR013019" /db_xref="InterPro:IPR013790" /db_xref="InterPro:IPR017855" /db_xref="PFAM:PF03165" /db_xref="PFAM:PF03166" /db_xref="WormBase:CRE29703" /db_xref="WormBase:WBGene00064235" /translation="MKRATVIGMTRTRAWAVKAVKNISRQAKKNNCFDVFFDAVIHEN PGTRCCKARNDKIAGANGRLIILILRCFRFSHVRYDSQIKSMGSCRYQFDSSNRTICM NPWHYKLTELPKKPVAPIVVNKNLDYGEPPVRMDDPFEHGGIVWEQGRSSEEVEDMTW MNIPNVTIEGDEIKNLYDRHALETVQEPGTYAEFNTPTSSNAPNGGPTISSNGTYPNF QSPVQSPVESPAQFNQQNGEQMVEEELNYRSGMSSPASYYGSPRMYPGNGVGTVDEEM MEDSERELASLNRNFPRNGNGRIMVPTYPNGRPITPIEHGGMFRGSIAELGELARLGV YECVEYEERANWLGLGYYEEGLHIGEPGSFRAQNVLIDGFTSTEMKSTNRFSVGFYTN PKRSQATSEVRSLIGRGVRLYLLGGECYAENLCNVPVFIQSISANLKNNFPMNTVSKL PPNGTMKLFDMYQFSKQLALAAERTYNDVHSLSRMCTIRMSFVKGWGEAYRRKSVIHS PVWVQIQLNNPMQWIDSVLTCMGAPPRQCSSRT" gene <467088..>467908 /locus_tag="CRE_29479" /db_xref="WormBase:WBGene00074849" mRNA join(<467088..467096,467142..467258,467519..>467908) /locus_tag="CRE_29479" /product="hypothetical protein" /db_xref="WormBase:CRE29479" /db_xref="WormBase:WBGene00074849" CDS join(467088..467096,467142..467258,467519..467908) /locus_tag="CRE_29479" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12486.1" /db_xref="WormBase:CRE29479" /db_xref="WormBase:WBGene00074849" /translation="MSKLVPIDLGVCAPCRELKGVCVTNNSSNFCVYARPLEDFSATI CNTDTSTIIVTAATTAFLVIVVFLAVVYYKEIKKIFSDMMDWCKKKKPEVVAKGCPAV CIEVDVESQEGAYPKVYPTLDLNNGPSAPEEPAETAQVIGDVDEKADGIPMIATDAED DNMEALSTWLK" gene complement(<468064..>468547) /locus_tag="CRE_29704" /db_xref="WormBase:WBGene00086098" mRNA complement(join(<468064..468203,468251..468400, 468448..>468547)) /locus_tag="CRE_29704" /product="hypothetical protein" /db_xref="WormBase:CRE29704" /db_xref="WormBase:WBGene00086098" CDS complement(join(468064..468203,468251..468400, 468448..468547)) /locus_tag="CRE_29704" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12327.1" /db_xref="WormBase:CRE29704" /db_xref="WormBase:WBGene00086098" /translation="MLPDPAPATVYHTPTREEMRKKDEEEYSQLISEEHTPTVPITLP TPKRPLKRLNGKQMIRMDQKPEEFSASLKNRRKGCNPQKSKLVGRNMSHIAGVRFCKE CRESVSIDENRKMIVQLCGRCKICTCK" gene <468924..>476262 /locus_tag="CRE_29480" /db_xref="WormBase:WBGene00060113" mRNA join(<468924..469016,469064..469801,469849..470081, 470127..470433,470651..471374,471423..471527, 471574..471850,471899..472133,472184..472345, 472392..472675,472722..472934,472981..473583, 473632..474070,474116..474418,474461..474679, 474725..475700,475746..476002,476047..>476262) /locus_tag="CRE_29480" /product="hypothetical protein" /db_xref="WormBase:CRE29480" /db_xref="WormBase:WBGene00060113" CDS join(468924..469016,469064..469801,469849..470081, 470127..470433,470651..471374,471423..471527, 471574..471850,471899..472133,472184..472345, 472392..472675,472722..472934,472981..473583, 473632..474070,474116..474418,474461..474679, 474725..475700,475746..476002,476047..476262) /locus_tag="CRE_29480" /note="contains similarity to Pfam domain PF03175 DNA polymerase type B, organellar and viral; contains similarity to Interpro domains IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR004868 (DNA-directed DNA polymerase, family B, mitochondria/virus)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12401.1" /db_xref="InterPro:IPR004868" /db_xref="InterPro:IPR006025" /db_xref="PFAM:PF03175" /db_xref="WormBase:CRE29480" /db_xref="WormBase:WBGene00060113" /translation="MALSKNDDFNLNIDQLRVFNKILTDAYKKDKTRPLVLYVGGAGG TGKTVLINRIVKEIGYAHIIVCGSTAMAGTIINGSTIHSMFNLNPFSEAEDDNPLAPH PHLMLLIIDEISMCDATLLRRVERRMKQIMRNDLPFGGCTVALFGDLLQIPPVPKTNK HGDCLPIDWIFKCKKHMFYKIYNKNFSAPIWKNLVTYDELEIVMRQEKDQEFAEMLKR WRVGITYPEDCDFLDQKARMCTREYFTDIVSEFYDHFDGYGSMMLLAHSNKMIGKLNK TITHKFFTNDELFTVAKSVYTRGKDDVMSKVEHTPMFLVGNGSRVLVNKNIDSKLING CLCEVRNIKSIDNIVVSMDLTILSTNETTPFHPTKTSIVSGSNCESWSHQYHIQPAYA VTYHKAQGQTLDKVFLAADKPLPPALFYVGASRVRSRDGLHILNYNLVDSIIADPEAL EEYKRLRLFVTMSCSFDEFPIGATRTSPLNDSFDEFPVGAIRTTRKNDSFDDFPVGAI RTTRKNDSFDDFPVGAVPLSRDALFKKTYASVASSIRSSIRASPIRASPIRSSPIRSS PTPIPSPKRVINLGTPFTRPAVSPTLLDVTSEAEFPTLWKPRATSTPRKEDMVPFSFD VSEISFETTKKKIKKVKKVKKVKKIKKVLRTISEESSNPAVSIPANPTALSSSTIPTV PSSSTIPTVPTHNPGQYGAGGPQKKKKILKRKSGNSSEVPKKKSSNPIPGQLMSAPEF THKTHFPTQEERAYLEKYAELSKASPLRRENDAYVTLKPLRMRFKGLDLIDTEELHLH VANLLDIFVRMRIQEAGGNLKTTKYWLQLSHKGYAESNNAHFITHKTYAAADGGVIMN EIAKQMQSNKDLLIDDSFTVSMNIFKSKDRSMAGRGSKNKEKIKNTILKMNFGVKNNR IFGSSHCLPKALAMGKLECDKKCATDPEEAKILCRQFENLVCHKITHRYKEEAQLKMA KELLIAAQMDPKQEQHDFDDIVTLANHLSDYQIILWSIDGRQTVASEVKHLNPNGSKF IGIFYQNGHYEFVSHTVGGNSSRFCFKCSKFDRKDHWKRCAKRCKRCGTTDCEPGTMN IQCPDCKILFRSRKCFEAHRVPSSARSLPYCKKYFYCLKCFMFDRTDMYSGRPHNCGG IIYCPTCCLKMEPGHDCSYKVPTEEQKTKKREAQKHAKYIVYDMETVTVESGEYRGNL SKTIQKTRVFITGHVEKGPKHQPNLICVKAFCTECYGAAGCKSCEIEEKYTDDYPEER MRWEKEDADDDNDDDDDDEEEFLDFNKIFEVEERNTPLARFANFLLNDPKANGAYVIA HNGGRYDHVILLAELDRLCGSSREEPRVILSGNTIISADFSFKKQKLHFRDSFQYLQM GLAKMPGAFGIEGEAKGFFPHLYNHPDNYNKVLPTLPDKKYYSPEFMSPAKCKEFEEW YEKSYNDGFKLQDELLKYCESDVRILTQTLISFIKMCEATFNGWSPIINACTLASYVM FVMKHEYIKDGDVGHIPENGFGGGNNSMLALKYLQWLEKKDPSLKLQYALRGGERQMK INGHNYHVDGYNPMTDEVFEVHGCLWHGCKKCFPIRDKPNPLCGNRTPQESYDETIMR ENDIRSVVKKLHVIWECELNEMLEKDREMKKFFELNKYTRRLQPRDALYGGRTQAFRS ITKALGDTVLNYLDYVSMYPFLNAGGTAYPRGNPIQITEKMPKPGDALKYRGLVFCDV LPKEDGCLGYLPQRFCKKLMFTLCRTCAEKQNVSGVCTHKRVSERYLTGVWTTDELNK AISKGYQVLKYHEIWHWPEEAWVKGGFFADYIKPLLKLKHESSGWPKENMTGEEKDAY IQRIFKNDGVLLDASNIKKNPALRSLCKIFLNSAWGKFGQNPMKNETILIMKADATTL TNFLNDPKYEPVSMVPFGKYKLWISRKPKREVLKSAPFTNLAIAAITTSAARLRLTEA MERVGVENMIYCDTDSIVFKQKKGDDPVGDLKGEQLGSLVSEIPEGCELVEVVTMAPK VYALKIKQPDGSYAYSVKAKGMTINHGNSKKITFDNMKNRMKNFISHGVADALEGDMM TFKRGSHALDGLWTCVMKKSLNPRMDKGHYVDGVVAPFGQLPENTHLINDYPF" gene complement(<476687..>479095) /locus_tag="CRE_29705" /db_xref="WormBase:WBGene00060112" mRNA complement(join(<476687..477746,477810..>479095)) /locus_tag="CRE_29705" /product="hypothetical protein" /db_xref="WormBase:CRE29705" /db_xref="WormBase:WBGene00060112" CDS complement(join(476687..477746,477810..479095)) /locus_tag="CRE_29705" /note="contains similarity to Pfam domains PF00665 (Integrase core domain), PF00385 ('chromo' (CHRromatin Organisation MOdifier) domain); contains similarity to Interpro domains IPR000953 (Chromo domain), IPR001584 (Integrase, catalytic core)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12332.1" /db_xref="InterPro:IPR000953" /db_xref="InterPro:IPR001584" /db_xref="PFAM:PF00385" /db_xref="PFAM:PF00665" /db_xref="WormBase:CRE29705" /db_xref="WormBase:WBGene00060112" /translation="MAKLVRKYHMIPYDEGGSIESGKRFLEKILTDPTLDAIAKCRFY QDLLYKIRQHMNLPIVNEDMMNIIRENFELHMPPAPPSSPAPRHPPPVTSPPWSPAVQ APPTVQAPPMIQPPPQMIQPPPQMIQPPTPVAPAMIQPIEPMEISKIDENKGGPVKKT KTKKKKKAKVEPKLEPKFEPKFEPKFEPKFEMKEEAMDAQEMKPPKTKGDPVKRIVKG ENIKKEIKKEIKKEMKKAIKKEPIKQEIKKEIKSEPMEEIKPQKTKGDPVKRIVKGET SHEAKKREMKEKKEVKKEIKKEVKKEIKKEIKKEIKQEPPEEYIKPIKKELIKTENIK KEVPGVIIKDVKKEIIENRGLKRKKPMMTNIPSTNRPKQHTTGAYRIATKRKGEPSIF DEVMKKNINYDKTIVKPTRRTGRGPVAPPGSRIYCKLAIAAIKDAWTNPKHPCAFTSV TNIHNFLKTRFKSLKYDEVEKVLEDVESFTLHRPTQKRFPRLKTIASGLYTNLQIDLA DMSKYKSSNDDVTFLLTIIDIYSRRLFVKPLKSKSGKEVAIALAEVFKDIGTSPITVY SDDGKEFYNSDVAKLFKDNGVKHVSPKSDLKCAVVERANRTLKTRLAKYMTQKYAYKY INVLEKVVKGINNSVNRGIGKKPVDVRNGDFIIPLPDRSVSGRIKFKLGDHVRISAKR GTFDKGYEQGWTTEVYVVRKVNHGKPVVYNLVDTNGEEIEGIFYSRELTKCTYDPSAV YRIEKVLDTRTHKGKKQSLVKWEGYPISFASWINSDSMISV" gene complement(<479436..>479645) /locus_tag="CRE_29706" /db_xref="WormBase:WBGene00086150" mRNA complement(<479436..>479645) /locus_tag="CRE_29706" /product="hypothetical protein" /db_xref="WormBase:CRE29706" /db_xref="WormBase:WBGene00086150" CDS complement(479436..479645) /locus_tag="CRE_29706" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12679.1" /db_xref="WormBase:CRE29706" /db_xref="WormBase:WBGene00086150" /translation="MRSLSDAAQIKNLLVQQFGTSWRGAYQAYQDVMSRPYQAMLINN DPQSPPRMRILSNFIDEYPISYEPV" gap 479777..479786 /estimated_length=10 gene complement(<480030..>480395) /locus_tag="CRE_29707" /db_xref="WormBase:WBGene00086159" mRNA complement(<480030..>480395) /locus_tag="CRE_29707" /product="hypothetical protein" /db_xref="WormBase:CRE29707" /db_xref="WormBase:WBGene00086159" CDS complement(480030..480395) /locus_tag="CRE_29707" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12711.1" /db_xref="WormBase:CRE29707" /db_xref="WormBase:WBGene00086159" /translation="MTDFARSKDSLNLLNTLFTVYAHHYNCAVFNLVQSAFALPPVTR NNSTYIILMRSLSDAAQIKNLLVQQFGTSWRGAYQAYQDVMSRPYQAMLINNDPQSPP RMRILSNFIDEYPISYEPV" gene <480850..>482700 /locus_tag="CRE_29481" /db_xref="WormBase:WBGene00060111" mRNA <480850..>482700 /locus_tag="CRE_29481" /product="hypothetical protein" /db_xref="WormBase:CRE29481" /db_xref="WormBase:WBGene00060111" CDS 480850..482700 /locus_tag="CRE_29481" /note="contains similarity to Trichomonas vaginalis G3 Erythrocyte binding protein, putative.; TR:A2FH35" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12525.1" /db_xref="WormBase:CRE29481" /db_xref="WormBase:WBGene00060111" /translation="MDDFYVTLPSNVPNAPFPNTSSRYVTRLPEVLQLRKDKWMVALT DLVYPHSFVNVGKPLYYWIHFKSGRQPIRITFPSAQYLNLEQILQTLNTKTRAKRSAN VELEDVSKAKRAVELSESDQNLLDLVNNRVETTPGDTPEGAPGGSEGAPGVSLTIHQQ QVLDTFKKGRGTAKGEKEKGEKPITTGGKSEEKTGEKAEDQAKGEKAKGDKAEGEPVK SEEKADEPVKSEEKADEPVKSEEKTDEPAKSEEKAEGESVKSGDKAKGDKTGGEPGII LSEESEELLDLYNSGQNAEGGKAEETGSSTPQNEKTGETKDPVLDETQKDYLALLEEE KLKDEKDRLKKEAEERAKAKAAEEAKKKAEEAKAKAAEEAKKKAEEVKAKAAEEAKKK AEEAKKRAEQEATDAEKNRTEHLLALVNNAIEVQNTLPEYKIMLETIKNRPGDITTYN ELLEEFQKLRSIVSIDGNLFDVTPYVRFSDEHGRVKVDFLHSDVYFLEFEKPFSYFLG FDDMIVRNNSTAPHKVDLFGDVSVIYLYSDVVEPIIVGNKKTNLLSVIPCTGQYGSVV YYTVPNPRYVPIINSTIDSIRIELLTDGGTPIPFSWGTTISVLHFKRLKL" gap 483547..486430 /estimated_length=2884 gene <491858..>492404 /gene="Cre-ran-4" /locus_tag="CRE_29482" /db_xref="WormBase:WBGene00060108" mRNA join(<491858..491954,492007..492098,492147..492245, 492291..>492404) /gene="Cre-ran-4" /locus_tag="CRE_29482" /product="CRE-RAN-4 protein" /db_xref="WormBase:WBGene00060108" CDS join(491858..491954,492007..492098,492147..492245, 492291..492404) /gene="Cre-ran-4" /locus_tag="CRE_29482" /note="contains similarity to Pfam domain PF02136 Nuclear transport factor 2 (NTF2) domain; contains similarity to Interpro domain IPR002075 (Nuclear transport factor 2); coded for by the following C. remanei cDNAs: DY527593, DR406208, DY525055, DR779472" /codon_start=1 /product="CRE-RAN-4 protein" /protein_id="EFP12684.1" /db_xref="InterPro:IPR002075" /db_xref="PFAM:PF02136" /db_xref="WormBase:CRE29482" /db_xref="WormBase:WBGene00060108" /translation="MSFNPDYENIATAFIQHYYAKFDNGDGMARAQGLADLYDPENSY MTFEGQQAKGRDGILQKFTTLGFTKIQRSITVVDSQPLYDGSIQVMVLGQLKTDDDPI NPFSQVFILRPNNQGSYFIGNEIFRLDLHNN" gene <492716..>493325 /locus_tag="CRE_29483" /db_xref="WormBase:WBGene00060107" mRNA join(<492716..492808,492858..>493325) /locus_tag="CRE_29483" /product="hypothetical protein" /db_xref="WormBase:CRE29483" /db_xref="WormBase:WBGene00060107" CDS join(492716..492808,492858..493325) /locus_tag="CRE_29483" /note="contains similarity to Pfam domain PF05620 Protein of unknown function (DUF788); contains similarity to Interpro domain IPR008506 (Protein of unknown function DUF788)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12496.1" /db_xref="InterPro:IPR008506" /db_xref="PFAM:PF05620" /db_xref="WormBase:CRE29483" /db_xref="WormBase:WBGene00060107" /translation="MVKQATKGQKEIYEENQATVTTYSVASTVSMAIYYSSCMFLSQC SSTDYVFFAISALVQIFAILFMKSLASQLNFFFDQFKTNLSFLEAKLDEKGHVLDAGA DLNDPEAFGEYCKDAIILSVITQLVSLYTTWGFLLLLAFPAAATYKFVAGFLLPWFTA GSDAEDVDDKKQKKMDRRREKVVYRR" gene <493535..>495930 /locus_tag="CRE_29484" /db_xref="WormBase:WBGene00060105" mRNA join(<493535..493663,493711..493905,493956..494553, 494601..494935,494983..495179,495279..495407, 495454..495611,495662..>495930) /locus_tag="CRE_29484" /product="hypothetical protein" /db_xref="WormBase:CRE29484" /db_xref="WormBase:WBGene00060105" CDS join(493535..493663,493711..493905,493956..494553, 494601..494935,494983..495179,495279..495407, 495454..495611,495662..495930) /locus_tag="CRE_29484" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8P5X6" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12610.1" /db_xref="WormBase:CRE29484" /db_xref="WormBase:WBGene00060105" /translation="MFQQRPAPTELPPVDDVIAICRDISSNIISTERNVPIAKLIIQK LFRNPHIDLCAILPPPQHYQESPYNHINSLINGNSIFFETVLEDDQLCSDLWDSILHQ CEVSGAPTDPAKDSILFQLVAQYVTRMLPCDESASTSMSVPRSPKTIHQTIRTPLQLF RADSPLVNRISIGTVSEFFAVLNSHYSRGSESNYVGDKRQFPAATSSKLLQFYCQNVR NGSIHQCKSIAAYSVFSEIPKNCIANFEYIFRFLLKQFHVFCQHSTGDTEVDSWKLDL MAAAPFKWPLLDFFKSSISQVPTSTVFRDIMMCWLTYARPWRYHNMSSPSDFAPAAKY KQFFEKNIEFYEVVLGKIIKKFAAFEMCEELLTSLRAIVEFAWREPQTLLLLHVQLDI QPHVFELLKQMQVVVRTHMRIIQSENAKNSGFWGSLFPSAEIPRIASSERICNDLLTL LKDSDSYVGTHLMSEMEVTQVGGDANQTVDYARDRHCLSLLNETPKSGLGLPDHFIDS PTNHMVLTPIGQRQVLNREKRFDFSRCAKDDPKAPPRSYELAPAVRLTNALAQKLNDF SFVRSIGEHYSEKTVIGAIVRKVMYPPVPNLDPNATVPAYSARVVRSPPLLRLRFFAS YMSIIGIGWFILAYNYGNIFTIVSVIVFALILSVLYLAQIDCGSY" gene <496173..>497685 /locus_tag="CRE_29485" /db_xref="WormBase:WBGene00086160" mRNA join(<496173..496279,496324..496441,496485..496582, 496691..496775,496820..496950,497001..497206, 497423..>497685) /locus_tag="CRE_29485" /product="hypothetical protein" /db_xref="WormBase:CRE29485" /db_xref="WormBase:WBGene00086160" CDS join(496173..496279,496324..496441,496485..496582, 496691..496775,496820..496950,497001..497206, 497423..497685) /locus_tag="CRE_29485" /note="coded for by the following C. remanei cDNAs: DR777569" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12713.1" /db_xref="WormBase:CRE29485" /db_xref="WormBase:WBGene00086160" /translation="MGKLEDVEAEKKVWESDDAWELRKAFMLAHYDDYPKIQLQCLSQ LFINVTLLGCEYSESLMQKIRTMGAGIAANKDRTKTGSYVKASAAKKRQAVKPSDLEG APVEAKREKVEEAPVSDHEAYNERLEKLRSTLSLTPHHLTGEQMMKAATNGCLMKWYV KKVNQKIEIYIDRYVAFRHTFSQYCVDIHDCAVNALIESILSCTAALNDDGDEIRFDG VPADECYAKSVERRLGKIKGGLGNGTHTLKAFSTQLESVNMSLIQNTKKLEGWSQQLD LVTADLLLGSRILSSTECTKPAMATIADEMCAQICQLILTNNATVINSMKSHSSLAFQ V" gene <497947..>499961 /locus_tag="CRE_29486" /db_xref="WormBase:WBGene00060104" mRNA join(<497947..498315,498368..499020,499156..499722, 499769..>499961) /locus_tag="CRE_29486" /product="hypothetical protein" /db_xref="WormBase:CRE29486" /db_xref="WormBase:WBGene00060104" CDS join(497947..498315,498368..499020,499156..499722, 499769..499961) /locus_tag="CRE_29486" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain); contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014014 (RNA helicase, DEAD-box type, Q motif), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12325.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00270" /db_xref="PFAM:PF00271" /db_xref="WormBase:CRE29486" /db_xref="WormBase:WBGene00060104" /translation="MSLAFRTLSFGIKKAPPKKKDADDSKKELSTITAESLKRYDELR EKMIGKVETKKGKKVKKAVKKDWRLENCNFKILSFLKKGFVSASIRLLSSRKRDHESD EDSEEEAEESVDEVEKKMQKLLDDIRRANRIFTWGDNLPNIILRFTDSNISSSLLSRL TGQSIRQPSPIQMQSIPFMMKRRNILASAPTGSGKTLAFALPVIEEILELKQRADYSK SSKLLTIVLEPTRELAAQTYTEFVKYCAETSISVANFSGEETDIQHADILVSTPNRIV FHLDKIDTSALRWLIVDESDRLFEVIEGQEKCFRNQLGAIYKACDAKCTRVAFFSATF SHEVEKWCKENIDNIGMVCVGERNSSNTSVKQELTYCGTEDGKKIAIRNLLRTSFKPP ALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTE LLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDTDMKYIKSIA TVIRQSGFEVPEYLLEMKKVSRDRKKEMLKHAPKRHRIAMVKEQVIKRKKMLAKAAAD KKKEENVEKPRTEKIKTKKKLIKKKKL" gene <502021..>502583 /locus_tag="CRE_29487" /db_xref="WormBase:WBGene00060103" mRNA join(<502021..502285,502339..>502583) /locus_tag="CRE_29487" /product="hypothetical protein" /db_xref="WormBase:CRE29487" /db_xref="WormBase:WBGene00060103" CDS join(502021..502285,502339..502583) /locus_tag="CRE_29487" /note="contains similarity to Pfam domain PF08648 Protein of unknown function (DUF1777); contains similarity to Interpro domain IPR013957 (Protein of unknown function DUF1777)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12350.1" /db_xref="InterPro:IPR013957" /db_xref="PFAM:PF08648" /db_xref="WormBase:CRE29487" /db_xref="WormBase:WBGene00060103" /translation="MGRDRSRSRDRKRRSRSRSVEKRRERSRSRDRERRDIRKPRDDK ERRSRSRSPRDKRDRRDRSRSRERKERDRERQRKDKEPKKREKQEEISLESLQSVDDE SMIAAMGFGGFNTTKNKQVNYFLFYVKRLTFQVNDNVDGCVNIKKPRRYRQYMNRKGG FNRPLDFMG" gene <502788..>505740 /gene="Cre-edc-3" /locus_tag="CRE_29488" /db_xref="WormBase:WBGene00060102" mRNA join(<502788..502918,503020..503303,503438..503674, 503719..503864,503913..504076,504121..504223, 504973..505248,505301..505568,505625..>505740) /gene="Cre-edc-3" /locus_tag="CRE_29488" /product="CRE-EDC-3 protein" /db_xref="WormBase:WBGene00060102" CDS join(502788..502918,503020..503303,503438..503674, 503719..503864,503913..504076,504121..504223, 504973..505248,505301..505568,505625..505740) /gene="Cre-edc-3" /locus_tag="CRE_29488" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8NQY6; coded for by the following C. remanei cDNAs: DR408633" /codon_start=1 /product="CRE-EDC-3 protein" /protein_id="EFP12594.1" /db_xref="WormBase:CRE29488" /db_xref="WormBase:WBGene00060102" /translation="MVNMDDKHIGSVISAETNDGSVYQGKLTTLDAHNGNVTMANVIK DGLPLNRCITLSSSDISRLKVIRAATQPTSVTPAQVPLYSAPSAKKQKPLKKSVDSTI SSTSIASSSASSVPTSSSNNRPMILPPKSKGKSPKTFVASVEKLFEHHSNQRASPPKQ PAPSKKQNRQSPKRNGFSHVTEEISETPQFKNFEPQVPNPKVLSAITPNGGKCSKKQG PSGNPVLDALNHYKGIGRRNKNDLSEPIDFDLDSDFDFAENLKLFEKDQNDDEYYENV EKLKVSQNFAHYENIIDDENRITSWTNLKARSGLVKSGGTPQKLENSTHFQVTGVSFE KSMNGDPIPAISVHEKKEFLNACKESLGEAVYDTVVADRIFQWVSEIQMSHGDTHGTI VLLASASNSVRSIRRLLTHFDKRRYNCHLFGKYPGQHFDHVNVVDDVKQLPREVPIIC ILSQEVNDDVECWLRAQSNGISSHYICVENVPSILDVSRCHLLQFGCATNGLRHVERK VKAVTRGGITFEKLCQGKMREETSSVLVDSAIADLGSPSNWFDEVSARFIATAFATNF LIRLSKSK" gene <506483..>507008 /locus_tag="CRE_29489" /db_xref="WormBase:WBGene00060101" mRNA join(<506483..506605,506652..506736,506789..506868, 506916..>507008) /locus_tag="CRE_29489" /product="hypothetical protein" /db_xref="WormBase:CRE29489" /db_xref="WormBase:WBGene00060101" CDS join(506483..506605,506652..506736,506789..506868, 506916..507008) /locus_tag="CRE_29489" /note="contains similarity to Brugia malayi MGC84563 protein, putative.; TR:A8NQY9" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12700.1" /db_xref="WormBase:CRE29489" /db_xref="WormBase:WBGene00060101" /translation="MNSFLSSTYSVAGALLLSGKWMNDWWEISLSIFLWMTLSFMIIS LGASLLSLFTLRKHPYVCFIPIPFIIMMIVIPFVFGAPTSMVLALAMHASRNAVSTWY CAVMGIVQTILIFVISVTRIHATL" gene complement(<507346..>509142) /locus_tag="CRE_29708" /db_xref="WormBase:WBGene00060100" mRNA complement(join(<507346..507492,507599..507692, 507769..507941,508235..508317,508368..508491, 508548..508859,508907..508981,509029..>509142)) /locus_tag="CRE_29708" /product="hypothetical protein" /db_xref="WormBase:CRE29708" /db_xref="WormBase:WBGene00060100" CDS complement(join(507346..507492,507599..507692, 507769..507941,508235..508317,508368..508491, 508548..508859,508907..508981,509029..509142)) /locus_tag="CRE_29708" /note="contains similarity to Pfam domain PF00180 Isocitrate/isopropylmalate dehydrogenase; contains similarity to Interpro domains IPR004434 (Isocitrate dehydrogenase NAD-dependent, mitochondrial), IPR001804 (Isocitrate/isopropylmalate dehydrogenase); coded for by the following C. remanei cDNAs: DY527888, DR406615, DT934623, DY524719, DR778393, DR408640, DR408661" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12590.1" /db_xref="InterPro:IPR001804" /db_xref="InterPro:IPR004434" /db_xref="PFAM:PF00180" /db_xref="WormBase:CRE29708" /db_xref="WormBase:WBGene00060100" /translation="MFIFFSVFILIFPGLIMLGKCIKKASSIGQTMRFSSGDIRRVTL IPGDGIGPEISAAVQKIFEAANAPIAWDPVDVTPVKGRDGVFRIPNRCIELMHENKVG LKGPLETPIGKGHRSLNLAVRKEFNLYANVRPCRSLEGHKTLYDNVDVVTIRENTEGE YSGIEHEIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTAVHKANIMRQSDGL FLSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVMPNLYGDILSDLCAGLVG GLGVTPSGNIGKEAAVFESVHGTAPDIAGQDKANPTALLLSAVMMLRYMNLPQHAARI EKAVFDAIADGRAKTGDLGGSGTCSSFTADVCARVKDLA" gene <509912..>510756 /locus_tag="CRE_29490" /db_xref="WormBase:WBGene00060099" mRNA join(<509912..510091,510140..510290,510352..510444, 510500..510610,510659..>510756) /locus_tag="CRE_29490" /product="hypothetical protein" /db_xref="WormBase:CRE29490" /db_xref="WormBase:WBGene00060099" CDS join(509912..510091,510140..510290,510352..510444, 510500..510610,510659..510756) /locus_tag="CRE_29490" /note="contains similarity to Pfam domain PF01476 LysM domain; contains similarity to Interpro domain IPR002482 (Peptidoglycan-binding LysM)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12324.1" /db_xref="InterPro:IPR002482" /db_xref="PFAM:PF01476" /db_xref="WormBase:CRE29490" /db_xref="WormBase:WBGene00060099" /translation="MAMKEGSSVEHFAMRSRAARTSSSEGFQNDMPTYKDVVLIERKV KNGDTLNKLAIKYQVNVAEIKRVNNLVSEQAFLALSKVKIPVSRMRMALGVQSVSSQD EDENEVLIDIDDRTALLREERNSRDPSVEDIFHKTDTNIAQVREALPEDGAASTGFHF VTARAPTSPTVSVWIVILGVLLIFCVLPLLLTFYEEQEEAAHLHKTTHAA" gene complement(<511220..>512795) /locus_tag="CRE_29709" /db_xref="WormBase:WBGene00060098" mRNA complement(join(<511220..511310,511359..511560, 511607..511730,511915..512018,512080..512353, 512397..512495,512656..512720,512768..>512795)) /locus_tag="CRE_29709" /product="hypothetical protein" /db_xref="WormBase:CRE29709" /db_xref="WormBase:WBGene00060098" CDS complement(join(511220..511310,511359..511560, 511607..511730,511915..512018,512080..512353, 512397..512495,512656..512720,512768..512795)) /locus_tag="CRE_29709" /note="contains similarity to Brugia malayi Putative uncharacterized protein BMBAC01P19.03a.; TR:Q8IHI9; coded for by the following C. remanei cDNAs: DT933780" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12314.1" /db_xref="WormBase:CRE29709" /db_xref="WormBase:WBGene00060098" /translation="MPDRNAVIAQQLAKGDVLWVPYRKDPLWPALVNNVYPKKVSYTF FPLPGGYEEPKKSRFGCAPKLTYAFVTTEPVPQHADAKLKEAHSAACSYLAQRGKTRG ADIPSYGEADVKETVNIVEKKQKKDTKKDENKKLKRTRKETDSDDNEEDDEIRPIKKA TTSTSDRSTPSGSQEQPKITNEQSEAMMKMINERLDALVNEIWRKREVVDCQKTLVND KMMIILKNNQFLKESDYETVFERVVNIVRSKNQSLSLISAFNLTASHIIPHVLISCFS KIKNMDYQAAKDIFHYQKRHALGLDPTMNIPITDHLEELCRLASDEIDAIRK" gene complement(<513228..>515045) /locus_tag="CRE_29710" /db_xref="WormBase:WBGene00060097" mRNA complement(join(<513228..513352,513933..514089, 514252..514331,514384..514589,514634..514820, 514865..514973,515025..>515045)) /locus_tag="CRE_29710" /product="hypothetical protein" /db_xref="WormBase:CRE29710" /db_xref="WormBase:WBGene00060097" CDS complement(join(513228..513352,513933..514089, 514252..514331,514384..514589,514634..514820, 514865..514973,515025..515045)) /locus_tag="CRE_29710" /note="contains similarity to Pfam domain PF00153 Mitochondrial carrier protein; contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR001993 (Mitochondrial substrate carrier); coded for by the following C. remanei cDNAs: DR408825" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12484.1" /db_xref="InterPro:IPR001993" /db_xref="InterPro:IPR002067" /db_xref="PFAM:PF00153" /db_xref="WormBase:CRE29710" /db_xref="WormBase:WBGene00060097" /translation="MPHDSNEGKNRPSVVLSLSAGAIAGALAKTTIAPLDRTKIYFQV SSTRGYSFRSAIKFIKLTYREHGFWALYRGNSATMARVVPYAAMQFAAFEQYKKLLKV DENNIRTPVKRYITGSLAATTATMITYPLDTAKARLSVSSKLQYSSLRHVFVKTYREG GIRLLYRGIYPTILGVIPYAGSSFFTYETLKIMYRDNTGKMEGSMYRMVFGMLAGLIG QSSSYPLDIVRRRMQTGRIPSGWSPLRALIHIYHTEGLKRGLYKGLSMNWLKGPIAVG VSFTTYEKVIELVGHLKR" gene <517259..>518599 /gene="Cre-cfim-1" /locus_tag="CRE_29491" /db_xref="WormBase:WBGene00060096" mRNA join(<517259..517468,517629..517726,517775..518004, 518454..>518599) /gene="Cre-cfim-1" /locus_tag="CRE_29491" /product="CRE-CFIM-1 protein" /db_xref="WormBase:WBGene00060096" CDS join(517259..517468,517629..517726,517775..518004, 518454..518599) /gene="Cre-cfim-1" /locus_tag="CRE_29491" /note="contains similarity to Interpro domain IPR016706 (Cleavage and polyadenylation specificity factor, 25 kDa subunit); coded for by the following C. remanei cDNAs: DT936257, DT935858" /codon_start=1 /product="CRE-CFIM-1 protein" /protein_id="EFP12527.1" /db_xref="InterPro:IPR016706" /db_xref="WormBase:CRE29491" /db_xref="WormBase:WBGene00060096" /translation="MDDVWPKIERTTIPASVPESPMNFDEKPPFNRTINVYPLTNYTF GTKEAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLPHILLLQIGTTFYK LPGGELEIGEDEVSGVTRLLNETLGRTDGESNEWTIEDEIGNWWRPNFDPPRYPYIPA HVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDNAAAYGPLISSLPTTLSR FNFIFNDSN" gene <519191..>520704 /locus_tag="CRE_29492" /db_xref="WormBase:WBGene00060095" mRNA join(<519191..519228,519291..519753,520377..520460, 520507..>520704) /locus_tag="CRE_29492" /product="hypothetical protein" /db_xref="WormBase:CRE29492" /db_xref="WormBase:WBGene00060095" CDS join(519191..519228,519291..519753,520377..520460, 520507..520704) /locus_tag="CRE_29492" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12595.1" /db_xref="WormBase:CRE29492" /db_xref="WormBase:WBGene00060095" /translation="MSENEEKWDDEGREFITTNGCLMLGSLLVQALSGFIISIAFRNL RIIRQLDEKEKMRKELSMSTEEGTTTTGTTTGGLISPRYFNSDEYKTRQGRKRIKMIG KAAYAGVRRRHPRRDPKQERTPSDEYVKLWKDDKLEDVKEEKEKTKVETISKKQKSST AKSHAKKKPKKEYDDQKFTNKGPVRLKTHKITANSLFEENPEVKPEKPKTIKKISFGG ENVSYEVGNEVDVFEKLSNESVGESGGSILTASIKEVKPRTD" gene <525261..>527356 /gene="Cre-ces-1" /locus_tag="CRE_29493" /db_xref="WormBase:WBGene00075169" mRNA join(<525261..525688,525992..526079,526602..526681, 527036..527220,527271..>527356) /gene="Cre-ces-1" /locus_tag="CRE_29493" /product="CRE-CES-1 protein" /db_xref="WormBase:WBGene00075169" CDS join(525261..525688,525992..526079,526602..526681, 527036..527220,527271..527356) /gene="Cre-ces-1" /locus_tag="CRE_29493" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="CRE-CES-1 protein" /protein_id="EFP12695.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE29493" /db_xref="WormBase:WBGene00075169" /translation="MITSSFNLSSNSISNSSSNTNKAGDFPTLGDFFVLLFSNFKFSF SDLQLWSLVNLHLQMQTSCISSSSSNSSSSLDSQKKSTPPPGTTIFSIENILNPKIII PKIEIENDDDVSSSPSPACSTTGYTLDSLQNMDRRSLKRKNTSSTSQNRCICDKCGKS YATTSNLSRHKQTHRALDSPHAKQCPHCDRVYVSMPALSMHILTHNASHECNVCGKRF SRLWLLQGHLRSHTGLRPFSCAHCGKSFADRSNLRAHMLTHTGDKRFECDKCGRRFAL RAYLNRHLETCK" gap 527723..527732 /estimated_length=10 gene complement(<527965..>528635) /gene="Cre-cpn-1" /locus_tag="CRE_29711" /db_xref="WormBase:WBGene00060094" mRNA complement(join(<527965..528468,528516..>528635)) /gene="Cre-cpn-1" /locus_tag="CRE_29711" /product="CRE-CPN-1 protein" /db_xref="WormBase:WBGene00060094" CDS complement(join(527965..528468,528516..528635)) /gene="Cre-cpn-1" /locus_tag="CRE_29711" /note="contains similarity to Pfam domains PF00402 (Calponin family repeat), PF00307 (Calponin homology (CH) domain); contains similarity to Interpro domains IPR016146 (Calponin-homology), IPR001715 (Calponin-like actin-binding), IPR003096 (SM22/calponin), IPR003247 (Calponin-like actin-binding subtype), IPR000557 (Calponin repeat); coded for by the following C. remanei cDNAs: DT934308" /codon_start=1 /product="CRE-CPN-1 protein" /protein_id="EFP12489.1" /db_xref="InterPro:IPR000557" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR003096" /db_xref="InterPro:IPR003247" /db_xref="InterPro:IPR016146" /db_xref="PFAM:PF00307" /db_xref="PFAM:PF00402" /db_xref="WormBase:CRE29711" /db_xref="WormBase:WBGene00060094" /translation="MSAFASSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQEVTG QSFDTQGDADNFVKVFQDGSVLCNLANALKPGSVKKVNTSAMAFKKMENISFFLKFAE EFVQKSELFQVFSLKVKENLLFCVKTVDLYEGQDPNAVLICLASLARKSEKNFGRSGL GPKEAQGDRREWTEEQLKAGHNVIGLQMGSNKGATAAGLNMGNTRHM" gene complement(<530556..>532425) /gene="Cre-mfap-1" /locus_tag="CRE_29712" /db_xref="WormBase:WBGene00060093" mRNA complement(join(<530556..530735,530788..531060, 531368..532157,532268..>532425)) /gene="Cre-mfap-1" /locus_tag="CRE_29712" /product="CRE-MFAP-1 protein" /db_xref="WormBase:WBGene00060093" CDS complement(join(530556..530735,530788..531060, 531368..532157,532268..532425)) /gene="Cre-mfap-1" /locus_tag="CRE_29712" /note="contains similarity to Pfam domain PF06991 Micro-fibrillar-associated protein 1 C-terminus; contains similarity to Interpro domain IPR009730 (Micro-fibrillar-associated 1, C-terminal); coded for by the following C. remanei cDNAs: DY528862" /codon_start=1 /product="CRE-MFAP-1 protein" /protein_id="EFP12609.1" /db_xref="InterPro:IPR009730" /db_xref="PFAM:PF06991" /db_xref="WormBase:CRE29712" /db_xref="WormBase:WBGene00060093" /translation="MGDYTPGFEQRDSDNRSFGHSRLPTLGAIPVKNEKGQTVMQKVK VSRYVAGKAPEYARNYDSDSDESDHEKQREDERRRRRHRESSDEEDRRSHRRHEDYGR RRQVERPEVLGKEEEESSGKEQDSDEDEDEKEERRQRVRMRMLELQRNNGEREEEQEE EDESDEEEFERKRQRIREQMMKKEEMMKREIKEEQEEDEMEEEEEEESSEEEDSDEDV DPVPRLKPIFTRPKDRITLQKLEKEKEEEMKRKIEEERRAEERKRESAKLVEKVLQEE EEAEKRKTEDRVDLDSVLTDDETENMAYEAWKLREMKRLKRNRDEREAAAREKAELDK IHAMTEEERVKYLRLNPKIVTNKQDKGKYKFLQKYFHRGAFFLDEEEDVLKRNFSEAT NDDQFDKTILPKVMQVKNFGKASRTKYTHLTEEDTTDHQGVWASTNQLNSQFYTKRAA GARPVFDRPATKKRKN" gene <532822..>535959 /locus_tag="CRE_29494" /db_xref="WormBase:WBGene00060092" mRNA join(<532822..532923,532971..534005,534066..534337, 534796..535256,535303..535556,535601..535860, 535911..>535959) /locus_tag="CRE_29494" /product="hypothetical protein" /db_xref="WormBase:CRE29494" /db_xref="WormBase:WBGene00060092" CDS join(532822..532923,532971..534005,534066..534337, 534796..535256,535303..535556,535601..535860, 535911..535959) /locus_tag="CRE_29494" /note="contains similarity to Pfam domain PF07842 GC-rich sequence DNA-binding factor-like protein; contains similarity to Interpro domain IPR012890 (GC-rich sequence DNA-binding factor-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12392.1" /db_xref="InterPro:IPR012890" /db_xref="PFAM:PF07842" /db_xref="WormBase:CRE29494" /db_xref="WormBase:WBGene00060092" /translation="MFRKPKAKGTLRVRKTEAWDEPDGENQDDCAVIETKPVAAPRAA ISFDVDEGADSAFKVKKDKKKVEELKRQHKLEEEAEQIYKQEKERKEALEKIVKKEKQ SKEDKKTKNEKQKYLDKYRDKSAKHISNSESFDYDEHLDIDSDAVGSVSSKFASVFEG IPDSRAVFEAKKRRERARREGAQDGYIPLDDTQKIKSKNERNRLIREDENDDSDEECT NKFYSARELLRSEEDRRREEQEGFLEREHGDDDEGDRRKDEDSENEEWERQQIRKGVS RREIGQLRTEKRNTSKLFGHVAPVEDDTAMDMDIDMDMDMDVQVVGKPEFRGPRNTGG VVKIEDILAKLKLRIQERDEALNFRKEEKRKIEQTIEENKSLIAKLEMGLPDQSTKYT MYQELRVYSRSLLECLNEKVAEINSIVDKKRDCGRARRVRLSARRRQDMMDQHAECMQ GKSAKMGDAATRAAEREGRRGRRRRERETTLTGISHEEGLSTDDEEPTQQSMADQKTC DEVEAVASVLFADALDEYSDLRKVLGRMTDWLAVDSKSFQDAYVYLCLPKLCSPYVRL EMLQADVLKNETVLTSMQWFKIAMLAGSENAEIDQDHDILVELAPAIIEKVVIPFLID TIKEEWDPMSLRQTKNLATFCSIFEKLPNLTEKSKQFNAFLSAIREKICECISDDLFM PIFSPNVIEQPACRQFHDRQYWTCIKLIKSINALSSLISVAARFELVVEKCVNSQCVM AFRTGTKNDVSVERKIRGLIAELDDPLLMMGGRTSFRQLISTLEMVAEAQNQAGRNFH KDIKKFLTKLER" gene <536011..>537052 /gene="Cre-syx-17" /locus_tag="CRE_29495" /db_xref="WormBase:WBGene00060091" mRNA join(<536011..536298,536348..536463,536518..>537052) /gene="Cre-syx-17" /locus_tag="CRE_29495" /product="CRE-SYX-17 protein" /db_xref="WormBase:WBGene00060091" CDS join(536011..536298,536348..536463,536518..537052) /gene="Cre-syx-17" /locus_tag="CRE_29495" /note="contains similarity to Pfam domain PF05739 SNARE domain; contains similarity to Interpro domain IPR000727 (Target SNARE coiled-coil region)" /codon_start=1 /product="CRE-SYX-17 protein" /protein_id="EFP12320.1" /db_xref="InterPro:IPR000727" /db_xref="PFAM:PF05739" /db_xref="WormBase:CRE29495" /db_xref="WormBase:WBGene00060091" /translation="MDVFLTQIKYLFLNCQYCYEMLYYHRFTYFLTVKIKDSLLSLYF QMSSTSTSSTNRFKTLVQMYEKTANRQLGELRALQRIALQGGIRDTPALRESIATYEK DLEDGLRGILTVRGEMTDSNQEHEFDSIIEPIRQQIKTLSNVTKTLNPLRSPGANPFE QDIEDDNPYEMESRRYLRETTLKDNELRQLAVDVKERAEATAKVEKDMADLEKIFQEL GRIVHEQHDVVDSIEEQIERATEDVKRGNENLRKAVKSKAAKAPIYAGVVGGLAVGGP VGLAAGSAIAGIAAGVGGLVAGIYTGRFFKRSATSD" gene <537291..>539145 /gene="Cre-sig-7" /locus_tag="CRE_29496" /db_xref="WormBase:WBGene00060090" mRNA join(<537291..537796,538146..538245,538294..538542, 538599..538770,538814..>539145) /gene="Cre-sig-7" /locus_tag="CRE_29496" /product="CRE-SIG-7 protein" /db_xref="WormBase:WBGene00060090" CDS join(537291..537796,538146..538245,538294..538542, 538599..538770,538814..539145) /gene="Cre-sig-7" /locus_tag="CRE_29496" /note="contains similarity to Pfam domains PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD), PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)); contains similarity to Interpro domains IPR002130 (Peptidyl-prolyl cis-trans isomerase, cyclophilin-type), IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1); coded for by the following C. remanei cDNAs: DR776847" /codon_start=1 /product="CRE-SIG-7 protein" /protein_id="EFP12647.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR002130" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="PFAM:PF00160" /db_xref="WormBase:CRE29496" /db_xref="WormBase:WBGene00060090" /translation="MLISEGFSKKDNFQMAVLIETTLGDLIIDLFVKERPRCSLNFLK LCKKKYYNLNQFHSIERNYVAQTGDPSGTGKGGESIYSDMYGDQGRYFEREDLPKMRH TRMGIVSFVNNGDNMLGSQFFITLGENLDYLDDQHTIFGQVTEGLETLEKLNEQLTDT NNKPFRDIRISHTIVLDDPFDDDSRISYPPRSPSPTYDMLVKTDQIALDEKEDEDEGK TAEEIAEELRQREMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFS RFGKINNCEIVRDRRSGDSLQYAFIEFDNEKSCEQAFFKMDNVLIDDRRIHVDFSQSV SQNYKYKPKSKNVEEPPRRRPQSPPRRPEIKRSHQKSPSPRRHRRSPSPKRDKRRDDR RDNERRRRSPDNHRDRDRDRRDRDSDRGHRDRDRDNRRENHRDSDRDRRRHSPDRRRD RR" gene <539598..>540459 /locus_tag="CRE_29497" /db_xref="WormBase:WBGene00060089" mRNA join(<539598..539717,539768..540238,540322..>540459) /locus_tag="CRE_29497" /product="hypothetical protein" /db_xref="WormBase:CRE29497" /db_xref="WormBase:WBGene00060089" CDS join(539598..539717,539768..540238,540322..540459) /locus_tag="CRE_29497" /note="contains similarity to Homo sapiens Isoform 1 of Protein FAM76B; ENSEMBL:ENSP00000351631" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12427.1" /db_xref="WormBase:CRE29497" /db_xref="WormBase:WBGene00060089" /translation="MSAKVQSRCGDAVAERKYGTPFSCQSWKLQCGFAKKESEKYEGA PLLCRLCILQARHTGQTSVAGIPIPPEKPEKNGDGSSAEQKAEKEREKERHRSSRHHK DKDHRRDDKRHREHREHRSGHKRRHEESNNNGTSSSSSGVPPLTINNENGHGFPPFGE RDHGENMEKQHRMEDEIRRLKAAISEKDQLLFDKDKQISNLKADQYNLEKKHRERVQQ LIKEKEDSIRAIEHMRSSKSSKKN" gene <541211..>542970 /locus_tag="CRE_29498" /db_xref="WormBase:WBGene00060088" mRNA join(<541211..541402,541455..541821,541894..542099, 542181..542750,542791..>542970) /locus_tag="CRE_29498" /product="hypothetical protein" /db_xref="WormBase:CRE29498" /db_xref="WormBase:WBGene00060088" CDS join(541211..541402,541455..541821,541894..542099, 542181..542750,542791..542970) /locus_tag="CRE_29498" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00017 (SH2 domain); contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12515.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE29498" /db_xref="WormBase:WBGene00060088" /translation="MNSEYSRVKSIRRPVSLGNRSQRSKRTKKKKNDEEKTVGSGNQK TLFFRRQKNESNPEETEAFANICRCLIEHRWYHGVMPRGEISTLLEDEGDFCVRKTTE KSKPIVCISVKCQKEVRHFPLVFENGQWTLKNLIKTRRFFEVVELLNALVTEKISLSG AILVRAVPRPDYYIPHSDISLICKLGEGAFGEVWKGSLKRHEDEKVKKVEEKSAPGLP TTGRQEGLSEKGRSKLYVAVKKMKGNATKAMTEEFVMEAKLMRQLVHPNIVTVFGVAP SEEPLMIVLELAANGCLKSYVSKYQCPMDQLMQFTADAARGMAYLSSKLVIHRDLAAR NLLLGSSVEVKISDFGLSSSGKTEIKVKQMKVPIRWLAPETLEEGVFSTKTDVWAYAV TLWEIFTRCQSDPYPGLTNQQAKDLIRGDALPMNPPEGTPPTVVKIMEDCFAKNPDNR PSFPAILKRLCPDEDLAAYEPKSQCSQSQSSPAKKSSGPSAEPLSARSRRPARK" gene complement(<545386..>546687) /locus_tag="CRE_29713" /db_xref="WormBase:WBGene00060087" mRNA complement(join(<545386..545723,546404..546567, 546617..>546687)) /locus_tag="CRE_29713" /product="hypothetical protein" /db_xref="WormBase:CRE29713" /db_xref="WormBase:WBGene00060087" CDS complement(join(545386..545723,546404..546567, 546617..546687)) /locus_tag="CRE_29713" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12641.1" /db_xref="WormBase:CRE29713" /db_xref="WormBase:WBGene00060087" /translation="MADFFSMDVLERTFDNSQNGRFALSQLILHCIYFSLPEPKKDLS NFIDIYLRNKEKLPPAVYELFRNYKQQVPRFDRDVYRCDKYSYKSSVSDFFSSPYFSG SAGVVIGLISILSAFFLLHFLQRRSGQGSMPTGSRSKVSSSSTGITAPLIPTPKKSKS SETPKKSNTPKSTPKVTPNNIPNKMKTELY" gene complement(<547733..>548188) /locus_tag="CRE_29714" /db_xref="WormBase:WBGene00060086" mRNA complement(join(<547733..548007,548054..548119, 548167..>548188)) /locus_tag="CRE_29714" /product="hypothetical protein" /db_xref="WormBase:CRE29714" /db_xref="WormBase:WBGene00060086" CDS complement(join(547733..548007,548054..548119, 548167..548188)) /locus_tag="CRE_29714" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12739.1" /db_xref="WormBase:CRE29714" /db_xref="WormBase:WBGene00060086" /translation="MKQIEVPFALSMMRGMLIGQCKQETKKSHLTCQRTVNNGLQTLC EILIEESLDYEPAMCQSVSYSNIKVVDTSSPWFSAVIGLFIGFLIAVVVVFVMKRFIF SKNRQMMSGASGASTVSK" gene <549014..>550214 /locus_tag="CRE_29499" /db_xref="WormBase:WBGene00060085" mRNA join(<549014..549069,549112..549275,549321..549386, 549588..549647,549694..>550214) /locus_tag="CRE_29499" /product="hypothetical protein" /db_xref="WormBase:CRE29499" /db_xref="WormBase:WBGene00060085" CDS join(549014..549069,549112..549275,549321..549386, 549588..549647,549694..550214) /locus_tag="CRE_29499" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12460.1" /db_xref="WormBase:CRE29499" /db_xref="WormBase:WBGene00060085" /translation="MSGISDHFFEDSPVSRSAIGNVLFMCVSLSYGHAFVKNNTKSQS RKRDSEPMDASAAQELTSLLNNFHNTKIEECFNLFQPVLGKLCNSTETYDQVECDHFI NNGMWDLCQALPDYEPCNIIEYEYSTDDYLHHPAFWAGCGFLIGLVLALIAILLIAFI CSKCKKRKEKKNAKNGIPSGSGSASVENGKGTKSKVTSSDTKNSSDENNGKPAVPKSQ YIGEQFPTADGKKSVFLGAQTIMKNPKDKTMAKGVNKTVAKGVVDNKKKRKNKQGKTV GALTAMEITMYK" gene complement(<550963..>553276) /locus_tag="CRE_29715" /db_xref="WormBase:WBGene00060084" mRNA complement(join(<550963..551837,552005..552073, 552291..552346,552395..552495,552764..552916, 553013..>553276)) /locus_tag="CRE_29715" /product="hypothetical protein" /db_xref="WormBase:CRE29715" /db_xref="WormBase:WBGene00060084" CDS complement(join(550963..551837,552005..552073, 552291..552346,552395..552495,552764..552916, 553013..553276)) /locus_tag="CRE_29715" /note="contains similarity to Stenotrophomonas maltophilia R551-3 Putative uncharacterized protein (Fragment).; TR:A1FX20" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12667.1" /db_xref="WormBase:CRE29715" /db_xref="WormBase:WBGene00060084" /translation="MISNDHSFARWSVVNILSATRRIRSPEIEEEESSITPEPEEEST RSQESEDEEPRHGGRAHEEQAKSPMRSPDSEEEPTRTREPEYRGKPPIVQGRAQIRRR SPREDGGEVIEEAKTRGGVAQTWRRAANRWKKKRVAPSSQPYLFDIKQLHLLSNDIHT LRFDDTDLGRNSIAARYSLCYATFAYKTHSTDVCKAVVNNGFARLCSLFEGEENVGNP LCVGIEPRHVWILDPLAAWFWGIIGIFIGFVLGLIGLVLLYKLCLKKKGFKIPFMKKT GDEKKDTKKDTKKDKMMGKALNLSKDSKASQDSKDTKNSKDSKDSKDTKTSKDTKNSK DSKDTKTSKTFKKIKDSKESKTASSDSKDTKSKKNFGPSKSIKGSKDKGSKDKALKEK TMKSMKKSKKLEKSKKGGKPSKLKPSQEQSTPVKSSPNTPKNSKEPTKGKPSAEVSKF KSSPTNTPKGSKEVVTPTKNNNKKKPSAEITPMKSSPGSSPVSPAGSKEAAKKKK" gene complement(<554739..>555526) /gene="Cre-djr-1.2" /locus_tag="CRE_29716" /db_xref="WormBase:WBGene00060083" mRNA complement(join(<554739..554896,554964..555117, 555163..555279,555326..>555526)) /gene="Cre-djr-1.2" /locus_tag="CRE_29716" /product="CRE-DJR-1.2 protein" /db_xref="WormBase:WBGene00060083" CDS complement(join(554739..554896,554964..555117, 555163..555279,555326..555526)) /gene="Cre-djr-1.2" /locus_tag="CRE_29716" /note="contains similarity to Pfam domain PF01965 DJ-1/PfpI family; contains similarity to Interpro domains IPR006287 (DJ-1), IPR002818 (ThiJ/PfpI)" /codon_start=1 /product="CRE-DJR-1.2 protein" /protein_id="EFP12553.1" /db_xref="InterPro:IPR002818" /db_xref="InterPro:IPR006287" /db_xref="PFAM:PF01965" /db_xref="WormBase:CRE29716" /db_xref="WormBase:WBGene00060083" /translation="MKNRKKHTNYMNLHISRMSKSALIILAPEGAEETEVIIPGDVLT RGGIQVEYAGLEGKCPKTGMMRPVKCAKGAQIMPSASFDDVKDKKFDIVIIPGGPGSS TLAESSCVGGVLQSQFKSGGLIGAICAGPTVLLKHGIKVDEVTGHYSVKDKLIEGGYK YSEDHVVVSGKVITSQGPGTAFEFALKIVEIMEGAEKAKELVKPLCFKC" gene complement(<557369..>558897) /locus_tag="CRE_29717" /db_xref="WormBase:WBGene00060082" mRNA complement(join(<557369..557797,557844..557903, 558573..558659,558709..>558897)) /locus_tag="CRE_29717" /product="hypothetical protein" /db_xref="WormBase:CRE29717" /db_xref="WormBase:WBGene00060082" CDS complement(join(557369..557797,557844..557903, 558573..558659,558709..558897)) /locus_tag="CRE_29717" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12619.1" /db_xref="WormBase:CRE29717" /db_xref="WormBase:WBGene00060082" /translation="MASEGGNSSGGGSTGDKGAVGGSGGGGSQGVPDQKEGKKFFKFA FNVNKKVADETEMTQDFMNDLKHYEEFDKTVGDCASYLENIFIPFSSKNANNYEDSFA RLGSALAEFKTYVPQNHVATFENFSSKMKAAAVSRKAYQNVQSYHLRHMKRFHADNYE SFVEQRKKFDDARKKMDQAKADVREAKTTTAIEKKAICYQLTVDDFDQQTEELIKIIE ALPKIKQGYVKDIFVVLTKHKQYHSDMSKFFAASVM" gene <563131..>565385 /locus_tag="CRE_29500" /db_xref="WormBase:WBGene00060081" mRNA join(<563131..563319,563369..563468,563520..563825, 564105..564233,564289..564490,564878..>565385) /locus_tag="CRE_29500" /product="hypothetical protein" /db_xref="WormBase:CRE29500" /db_xref="WormBase:WBGene00060081" CDS join(563131..563319,563369..563468,563520..563825, 564105..564233,564289..564490,564878..565385) /locus_tag="CRE_29500" /note="contains similarity to Pfam domain PF03828 Poly(A) polymerase; contains similarity to Interpro domain IPR002058 (PAP/25A-associated)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12596.1" /db_xref="InterPro:IPR002058" /db_xref="PFAM:PF03828" /db_xref="WormBase:CRE29500" /db_xref="WormBase:WBGene00060081" /translation="MSPFTYSKVAAKNLLAPLSLTAPVAPEGPARIEFTETKLSIQYK RGVENTCNVIFEKEYIEKRITIEIESFGNTEHQEALKKAERCFRKAMELSYSNSKCWL TGSYAAGVDLHTSDLDFTVKAPSVNGSNQFAKLLEIRNRLRYIHINNVNVFEKVYVQK GMIPVLQMVHAETGVSIDVTIDNDTAKRNTQLLCWYGQLDAKFPLLCKAVKAWASKVG VEGASRGRLNSFSLCMMVLSYLQVGTTPAVLPNLQEMFPELNGEINVESDNYTKRNLR EEIQEQGKFKFDENKSSLAALFLGCLRYYADFDFSTKWISVKNGKVLEKQWSEEGEPL NGLPQKCWYIVVEDPFLPTPHNCAGTVQQSDYVERIQMEFREEYHRILETNTIFSLFP CNWSRRLMENGMKRDRQIHEWEKKKEEVNDVAEWGKTICLDWGEPRRKQPEEYWNLEM RRQRRFPILQPWPDRLMAVYSVDAYLI" gene complement(<565608..>567930) /locus_tag="CRE_29718" /db_xref="WormBase:WBGene00060080" mRNA complement(join(<565608..565980,566026..566216, 566289..566777,566877..567163,567214..567328, 567428..567491,567740..>567930)) /locus_tag="CRE_29718" /product="hypothetical protein" /db_xref="WormBase:CRE29718" /db_xref="WormBase:WBGene00060080" CDS complement(join(565608..565980,566026..566216, 566289..566777,566877..567163,567214..567328, 567428..567491,567740..567930)) /locus_tag="CRE_29718" /note="contains similarity to Rattus norvegicus CBF1-interacting corepressor.; SW:Q5U2T8" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12499.1" /db_xref="WormBase:CRE29718" /db_xref="WormBase:WBGene00060080" /translation="MSDTSKSKGKWREKREDPCEFSESRSKTRSSWNPFRKVLSLVSG NRHDSIESINSSDGERVTLRWTASCINTTCPIFAKNPQFNMIYCPATSILMYVVVTLA SEHSMTMTLRRLFELTDSDIQEIREMSVKLTELRSPHQFYCFVRFLVDEEPTTTVSKE LMIRSNEVANQQVFASIRPSRVTKYLNSLTFSPVSFNRPSLLSTNGYGSAGLNAKWHG KTKKAGMHRFAVTYHKKKYEVFFEIRTAYRTVQMENFEVFEVPFKFGSGSFGSLIFLR PHFIGHLPYVNRQLSAQSLSKMLDELFASQWIPQGKLLIPQFQVSGCHDLWKNLMRNG VQPDLGQSQKAPPMASLWHWTSLKVGSEGINGNTVIKKKFEKESESQKALKKTFHDRL NPEGLLQIHKPYAARIDSPFTYIVMVQGVPLFTGSFFGSPPPKSSDIFVNAPERIRQR HTAVIRKRKGKETRKQKLLRKLKKSEEREKEKDRKREKKHRNARRSASPPKPSGPSTS SSGSSTPTSEASSSKSSPSTKSSPISPKVSIIEKKEEEKKEEKSKSSAWRRFANRIFK RKH" gene complement(<568709..>574026) /locus_tag="CRE_29719" /db_xref="WormBase:WBGene00060079" mRNA complement(join(<568709..568800,568857..569013, 569095..569390,569438..569738,569801..569923, 570270..570390,570439..570545,570595..570891, 571337..571448,571493..571557,571607..571910, 571963..572213,572290..572485,572533..572627, 572696..572785,572837..573149,573444..573523, 573913..>574026)) /locus_tag="CRE_29719" /product="hypothetical protein" /db_xref="WormBase:CRE29719" /db_xref="WormBase:WBGene00060079" CDS complement(join(568709..568800,568857..569013, 569095..569390,569438..569738,569801..569923, 570270..570390,570439..570545,570595..570891, 571337..571448,571493..571557,571607..571910, 571963..572213,572290..572485,572533..572627, 572696..572785,572837..573149,573444..573523, 573913..574026)) /locus_tag="CRE_29719" /note="contains similarity to Pfam domain PF00246 Zinc carboxypeptidase; contains similarity to Interpro domains IPR014766 (Carboxypeptidase, regulatory region), IPR000834 (Peptidase M14, carboxypeptidase A)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12397.1" /db_xref="InterPro:IPR000834" /db_xref="InterPro:IPR014766" /db_xref="PFAM:PF00246" /db_xref="WormBase:CRE29719" /db_xref="WormBase:WBGene00060079" /translation="MRPLFGLFLLVISTTWAQQDLSWKADIFASERENEMAEQDALTR YFGNDKKNTTFFPTWDTMKAKVGDFININSTRLKNHNYNEMTAWLRALRLNYPNITHL YSAGKSTEGRELWVLIVSDKPKEHELLEAELKIVGNMHGNEVVGREAVLYLAEILCLN YGRNKYLTDLVDNARFHLMPSMNPDGYEKGFAGDRISAMGRANANDVDLNRNFPTKYP EHRESSGGSDPEIENIAVMKWLQSYPFVLSTNLHGGSLVANYPYDDSVTGQDGIYTAV SFDLKKRIARDRTRTRKPPLSADDKLFVELSYRYARAHTKMWKTGRRCGLSADGDNFI NGITNGAGWYHLAGGMQDWQYENTNCLEITVEMGCFKFPTDDMMPKLWEEHQYSLLSF MEMGLTGVTGLVTDRNNNTVANATISVDTGKDIISTESGEYWRLLPPGDHQVTVSARG LESDTFTVTVVPGARAVRHDITLLACGDNETKSELYIRGRGKNLIAVLSFDEIGGEAV DELARLTCTGDFVIDKDVSLMLIPNMTNELKGRLSDFDPAAVLIISEGIVETVTFSVS ENEPRLFDKAKMDESLLKALGNSIECDRKLLESKTALRVDDLQLKKAFELGISIGCDA KDLQKKAATIGTIADMIKNELIKDSVSEFSVVPSAHPGDHFTPDQMILVTNAAVAELQ RKECVQELTHGANKFYLMGAGKPPYTLIAAVEKRTEAMAYEMMSTYCNPDTKSQFSDI LDKSTLVFMPEIPHTQLNCHDYDTISPFKLLFDEAIGAVPELDFVIVLATGGMKVRYI NDTIGIGKSIAETYRANHDLMKSTESEGCAKGFPNEKEAIRAFSWNDNASRMDKSGVD HPADNLDALLVQIGCCYENMASGHLYSENQRSMKSALIERTRGVRIIGGIDGMTVSVD HMHKSLPLLRGGRRFIPLPNGEHLVKVRTPGGQMHAQFAVVISDKHPTSEKFIGVQSS NMVIITIASILMIVCCTFMCRQRVTSVLNRRGFFNGIGSNHGFERIPLYKSDDEDEDE VFDLQKL" gene <578046..>578922 /locus_tag="CRE_29501" /db_xref="WormBase:WBGene00060078" mRNA join(<578046..578126,578378..578455,578501..578568, 578623..578699,578771..>578922) /locus_tag="CRE_29501" /product="hypothetical protein" /db_xref="WormBase:CRE29501" /db_xref="WormBase:WBGene00060078" CDS join(578046..578126,578378..578455,578501..578568, 578623..578699,578771..578922) /locus_tag="CRE_29501" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12621.1" /db_xref="WormBase:CRE29501" /db_xref="WormBase:WBGene00060078" /translation="MSEDLRLSAKGDVFETNDRILRLGKAKIGACFVFTFALKMKSKM IFGILAAYTIISLGNKLFRFLYGVNDGDWFHSWLSGNFSIDNHYFTLYFSMFHLIHSR KWMQAVAVAIVVFFVAAVVRVLKESMMTNGIKSKVKKDRIWSNKLIFFP" gene complement(<579363..>580331) /locus_tag="CRE_29720" /db_xref="WormBase:WBGene00060077" mRNA complement(join(<579363..579501,579591..579672, 579722..579803,579852..579929,579983..580028, 580074..580144,580260..>580331)) /locus_tag="CRE_29720" /product="hypothetical protein" /db_xref="WormBase:CRE29720" /db_xref="WormBase:WBGene00060077" CDS complement(join(579363..579501,579591..579672, 579722..579803,579852..579929,579983..580028, 580074..580144,580260..580331)) /locus_tag="CRE_29720" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12346.1" /db_xref="WormBase:CRE29720" /db_xref="WormBase:WBGene00060077" /translation="MFERKRAGVDLSNTSVRVCGLRAKYWIIYFIIIQLILGVSNILF FIISILHNKGTDTSSGILNLFCVLLLLCSLWCQSKTMFTIIAVFTVIDTCAEFYLLFT RILIVLEVSSPYYTDYLILVVFSIIRVGFSSIYSVVLMRLSWCNGLADEDDLEKNKIY ECIQEMGIYKCTKCSESEDCDEEENEKID" gene complement(<580603..>582125) /locus_tag="CRE_29721" /db_xref="WormBase:WBGene00086151" mRNA complement(join(<580603..580791,581141..581204, 581253..581485,581527..581635,581689..581840, 581888..582035,582079..>582125)) /locus_tag="CRE_29721" /product="hypothetical protein" /db_xref="WormBase:CRE29721" /db_xref="WormBase:WBGene00086151" CDS complement(join(580603..580791,581141..581204, 581253..581485,581527..581635,581689..581840, 581888..582035,582079..582125)) /locus_tag="CRE_29721" /note="coded for by the following C. remanei cDNAs: DY525861, DT936411" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12681.1" /db_xref="WormBase:CRE29721" /db_xref="WormBase:WBGene00086151" /translation="MSHLLIANQNQSAFSSDLHNDWSGSVNCAWSNTVQHSNELYDLH GVGTVKNVLCLRLFASSIYEIANASKDGRKLMTAIFGEQLIRNIAEYDVQIYESIAQT VQYLAWKIRKSQILLFRRTSENHGWLSVREILVRILSNDNETHGKIIAGMSATILQDI HRSHVSRTNFREDFPLLPKNRFHDVFRVAFVLFNSTIGEYIQKGKKEVVYEMIASRLV YFYTRLAADTWRILVVRNGPKVETEWYMLRGVEDVEVDTRSSNRHQLTNTSSYNNNNN NSKTYNLNLSPAISQIHHANFMKQFTNQRPLMRKPLQ" gene complement(<582376..>584827) /locus_tag="CRE_29722" /db_xref="WormBase:WBGene00060076" mRNA complement(join(<582376..582879,582893..583305, 583349..583587,583628..583966,584013..>584827)) /locus_tag="CRE_29722" /product="hypothetical protein" /db_xref="WormBase:CRE29722" /db_xref="WormBase:WBGene00060076" CDS complement(join(582376..582879,582893..583305, 583349..583587,583628..583966,584013..584827)) /locus_tag="CRE_29722" /note="contains similarity to Interpro domain IPR001664 (Intermediate filament protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12474.1" /db_xref="InterPro:IPR001664" /db_xref="WormBase:CRE29722" /db_xref="WormBase:WBGene00060076" /translation="MNPKQRVNKRTVFEGTWFSTIFGLLKTRIFPDSDSEEEVEKPLK KKSKRSEEHEVREQNSVNGGDGDSKSGNSAYEIISFDSKDFTVISERILRKSVIWKLL TIRGPYYHFFGKFGKIMSRNRAIRKFIRRILLKIHERKIEFRDNMLPSMICSYGTEKP TVDDVMHIVEKMCKKVFCFTIAKVTIDLSKGNILSPLRKVFCEREVRLICNSRLGKYS FLVTLKFVIVILDISDNLRRLCKSMRLYISDKQTEELRNALVYYCFFCSADLLNYILS TTIDKSSGALQIQGFRILETFSNHEVNANLQLMNVSARLGSISFSTIKRRGQCSLWTS LPCEEKNRLLELVLEYGLIEELPEDAKLFLIDYVLDVRDNMRKMLTENSLRQAIESQL SGNFAECVMKLHDKRIERFLVETLSNVLNTEKMKIFEGAWIQYVLDSIKKLGKGPFGE SPNCSEIYTEVCQKMNSSSLALISSYFYQATPGGQSLLCHTLLQLLRFVVHLSLNTLR HVFHFDSKRHRVTYNGELDEEVTDFRGYDHSQSRAIVSKPQSVPSTFSINSTPTIPKK TFNFTPNSVPAASLSRLPAGCDVRQVRSYRWNTSSSPPPYTTPPVGQYSYNPISFQNT HSIGSTPQFLFTPVNSQPQVNFLPAQEIPIQSNTIFRRKTLLPTPCSLVKIPVPVVSQ SPVEAPQSPVENKSFIRKFPSDSTNGSYQTSSDDTRPSTVANDTPWSIDDETDIPKKW VDAYKIMLEWNQDLKSELEKAQAKLALLS" gene <585216..>586365 /gene="Cre-rpa-4" /locus_tag="CRE_29502" /db_xref="WormBase:WBGene00060075" mRNA join(<585216..585272,585316..585438,585485..585604, 585651..585741,585785..585984,586032..586130, 586177..>586365) /gene="Cre-rpa-4" /locus_tag="CRE_29502" /product="CRE-RPA-4 protein" /db_xref="WormBase:WBGene00060075" CDS join(585216..585272,585316..585438,585485..585604, 585651..585741,585785..585984,586032..586130, 586177..586365) /gene="Cre-rpa-4" /locus_tag="CRE_29502" /note="contains similarity to Interpro domain IPR012340 (Nucleic acid-binding, OB-fold); coded for by the following C. remanei cDNAs: DR780683, DY527165" /codon_start=1 /product="CRE-RPA-4 protein" /protein_id="EFP12710.1" /db_xref="InterPro:IPR012340" /db_xref="WormBase:CRE29502" /db_xref="WormBase:WBGene00060075" /translation="MDFSGGDGWPSHDISQEKQNQSVQTLGDKLPLPVTLSALKNNLD DTNEDAYQIGEFHFRTIHSVGNILEKTSEDGKTTYVLHDPENTEATFFAIQFGHYDDG GSKFISPDLSEDVRVRVMGKLKNVAGDKMLLVYYLQKLTDDKDYEIFKLETEVAHLFF ENNFLGRMRNGSTHGWDGMLAPPMTRYFQNIDPHSILSSVTPRTPRNPTRVEQHKPAQ ITHKTPSGLKAKIRACIRSESDKGSYGSDHGVPFIKILNRMGNVPEAQLRDIISEMEN SGMIYSAQQDEYMSLN" gene <586705..>588912 /locus_tag="CRE_29503" /db_xref="WormBase:WBGene00060074" mRNA join(<586705..586825,586876..587050,587519..587632, 588261..588411,588458..588616,588667..>588912) /locus_tag="CRE_29503" /product="hypothetical protein" /db_xref="WormBase:CRE29503" /db_xref="WormBase:WBGene00060074" CDS join(586705..586825,586876..587050,587519..587632, 588261..588411,588458..588616,588667..588912) /locus_tag="CRE_29503" /note="contains similarity to Pfam domain PF02535 ZIP Zinc transporter; contains similarity to Interpro domain IPR003689 (Zinc/iron permease)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12362.1" /db_xref="InterPro:IPR003689" /db_xref="PFAM:PF02535" /db_xref="WormBase:CRE29503" /db_xref="WormBase:WBGene00060074" /translation="MIRGIDPIYQALLAATFTWGVTALGASLVFVMRHQSKKLLDISL GFAAGVMTAASFWSLLAPAIEAAEADYKKWAFVPVAIGFAVGAGFVHLADTLLPSCVG EAGMSSLLSPPAIRSDTEMSLMPDREDLDVAALARSVNEEHRERDRSVEIGSDKRPDV IPEDDYRQSWRRILLLILAVTVHNIPEGLAVGVGFGSAGKTKTATFESAFNLAIGIGL QNFPEGLAVSLPLAAFGHSKLKAFWYGQLSGMVEPIAALLGAAAVIFMEPVLPYALAF AAGAMIYVVVDDIIPEAQRNGNGKLASLGCIIGFLVMMCMDVGLG" gene <589336..>590428 /locus_tag="CRE_29504" /db_xref="WormBase:WBGene00060073" mRNA join(<589336..589592,589638..589794,589843..589922, 589972..590052,590100..590221,590289..>590428) /locus_tag="CRE_29504" /product="hypothetical protein" /db_xref="WormBase:CRE29504" /db_xref="WormBase:WBGene00060073" CDS join(589336..589592,589638..589794,589843..589922, 589972..590052,590100..590221,590289..590428) /locus_tag="CRE_29504" /note="contains similarity to Pfam domain PF00467 KOW motif; contains similarity to Interpro domains IPR005825 (Ribosomal protein L24/L26, conserved site), IPR005824 (KOW), IPR003256 (Ribosomal protein L24); coded for by the following C. remanei cDNAs: DY525336" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12472.1" /db_xref="InterPro:IPR003256" /db_xref="InterPro:IPR005824" /db_xref="InterPro:IPR005825" /db_xref="PFAM:PF00467" /db_xref="WormBase:CRE29504" /db_xref="WormBase:WBGene00060073" /translation="MITSRVLRLPRKPFVDLDYARHMPAAYVERVKRTVPRKVFGDRF GAPDIKMYYVHPDDYLPSHKRPWEDKQLSSHLQRADKYFSSQLSQQFFNLRRPKSQRI PDTEWTFFPGDLVQVMVGKDKGRQGLVLTISRDTSDVIVDGLHTRLGEDMEGSEKLGV DKTLRWQEQPLSVSKKQVMLVDPNDESPCEARWQLNPAGDEYIRVSTKSGYEIPIPSQ AKVTYEYLQPENYIEVEGKDTPADAVLERTYMPKVASFEQEIMEDMGIKEERTPKPTF WY" gene complement(<590815..>600066) /locus_tag="CRE_29723" /db_xref="WormBase:WBGene00060072" mRNA complement(join(<590815..590868,590914..590972, 591043..591154,591548..591653,591740..591951, 592005..592075,594502..594642,594698..594982, 595142..595239,598739..598807,598863..599011, 599562..599762,599854..>600066)) /locus_tag="CRE_29723" /product="hypothetical protein" /db_xref="WormBase:CRE29723" /db_xref="WormBase:WBGene00060072" CDS complement(join(590815..590868,590914..590972, 591043..591154,591548..591653,591740..591951, 592005..592075,594502..594642,594698..594982, 595142..595239,598739..598807,598863..599011, 599562..599762,599854..600066)) /locus_tag="CRE_29723" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily; contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12364.1" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="PFAM:PF07690" /db_xref="WormBase:CRE29723" /db_xref="WormBase:WBGene00060072" /translation="MIHPFTLTYSIPQFPSLCFQPSRTVPVNPSFSSTSPLSAWTTTE SSSSAHLSRASTSSISPQSSADSETEERLPTCLAPRARGSSSAHSCSAATTSQSNRQS KERRNPSSSIGLNENEMGSNENGATNGCSNGQHVLLMEKQEKIEPKVFKKRWLILVIF MFLSGSNGAQWIQYSIIANIVSEYYNVSFQAVDWTSMIYMLTYIFFFIPAAWLLDKWG LRLSVLLGALGNCVGAWIKLMSTHPDSFWVTFVGQTIVGASQMFTLGIPPRLAAVWFG PDEVSRACALGVFGNQLGIAVGFVLPPMIVSNGTVEHITYDLTNLFLGSAVLNTVILA LVVCFFTARPSVPPSLAQVNALEEKTFDNNFWGTLRKLMTSRDFVILFVTYGINTGVF YAISTLLSQMVLSVYPNETVAVGQVGLVIVVAGMAGSVVGGFILDKFKRFKLTTIMIY LFSFIGMFSFTLTIDLDSMVIVFINAALLGFFMTGYLPIGFEFAAEITYPAAEGTTSG LLNASAQIFGIALTWLMGIVMHKFGTLTSNIIMSSCLIVGTVLTCFIREDLKRQKAHS VQCQIPTSETQLTSCTIQQNEHF" gap 593522..593531 /estimated_length=10 gene complement(<605405..>609031) /locus_tag="CRE_29724" /db_xref="WormBase:WBGene00060071" mRNA complement(join(<605405..605561,605647..605963, 606010..606402,606453..606633,606964..607077, 607125..607394,607444..607791,607975..608177, 608221..608616,608660..608910,608956..>609031)) /locus_tag="CRE_29724" /product="hypothetical protein" /db_xref="WormBase:CRE29724" /db_xref="WormBase:WBGene00060071" CDS complement(join(605405..605561,605647..605963, 606010..606402,606453..606633,606964..607077, 607125..607394,607444..607791,607975..608177, 608221..608616,608660..608910,608956..609031)) /locus_tag="CRE_29724" /note="contains similarity to Pfam domains PF00271 (Helicase conserved C-terminal domain), PF04408 (Helicase associated domain (HA2)), PF07717 (Domain of unknown function (DUF1605)); contains similarity to Interpro domains IPR002464 (DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR007502 (Helicase-associated region), IPR011709 (Region of unknown function DUF1605), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12658.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR002464" /db_xref="InterPro:IPR007502" /db_xref="InterPro:IPR011709" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00271" /db_xref="PFAM:PF04408" /db_xref="PFAM:PF07717" /db_xref="WormBase:CRE29724" /db_xref="WormBase:WBGene00060071" /translation="MDVNGNFPAWKKKKRKFKIGKDGQKIKLKPSVPISVFPKSAQTN GVIRQSGGQESNISASLTIKKKKKFKKNKNKQNGTAVEMKDEFMTSSVQLTNGVLTKK AKVELKTIPSLLRVVEKPATPVRSISNLFASQSDSKVSYSEKPALPIKPSLLGTPVPS VSKTTISKSSVARTIAFTPSKDNIKSTPPSTPKFVPNSEKFTRPQLPIDVVEQQLMYE LASQETLIVIGETGSGKSTQVPQLCVRAGIAEKGAIAVTEPRRVAAVSLAARVAVEMG TDIGGVVGYHVRFENATTHKTKIEYMTDGIVLRKALVSPLLDKYSTVIIDEAHERSLH SDVLMCILKKCQEQRRESKNPLRLIIMSATLQADKFQAYFDNAKVVLVAGRTFPIEVF HVNPKINKSFSSTDYVYNTVICVKHVHLNEPKGHDILVFLTGSEEIEAVAHQLAELNG SLPASADFILPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVID SGKVKSKRFEATNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFHKFETE NMPEILRCNLSATFLELMKLGMKNPHRLQLLDPPEPENIDAALLELTSLGAIKPITSD RNKFILTDMGNSFCMYPLPPDHARVLFQAQKEGCIMEAIKIIAAMQTDALFSGGSDSK IDLDVERIRRRFETREGDHITLLKLVLLTNNFFDQLNSKTEADARYNKSNKSLEREYN EAIRKFCNDNMINEQHLKTASMIEDQLKEIAVEQNVPFSTCGADFTKIRKSIAVGMFL NSCEYDRQEDRYRLMINPAITLNIHPSSCLSRSKPAYIVFSELMKTNDLYALQVTLID ADWVRPLITEHKKIRKNHLAESAQRIQQIAQVEPKAKKPKLNTTL" gene complement(<609531..>612843) /locus_tag="CRE_29725" /db_xref="WormBase:WBGene00060070" mRNA complement(join(<609531..609729,609776..609863, 609911..610221,610267..610632,610684..610907, 610954..611063,611110..611278,611329..611557, 611606..611822,611873..612037,612076..612476, 612522..612606,612651..>612843)) /locus_tag="CRE_29725" /product="hypothetical protein" /db_xref="WormBase:CRE29725" /db_xref="WormBase:WBGene00060070" CDS complement(join(609531..609729,609776..609863, 609911..610221,610267..610632,610684..610907, 610954..611063,611110..611278,611329..611557, 611606..611822,611873..612037,612076..612476, 612522..612606,612651..612843)) /locus_tag="CRE_29725" /note="contains similarity to Pfam domain PF05057 Putative serine esterase (DUF676); contains similarity to Interpro domain IPR007751 (Protein of unknown function DUF676, hydrolase-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12409.1" /db_xref="InterPro:IPR007751" /db_xref="PFAM:PF05057" /db_xref="WormBase:CRE29725" /db_xref="WormBase:WBGene00060070" /translation="MGSIDISHDVEADRELGSGQTVIIVEFIVFRPRTSNNILLAHVY QGSAVSKTIEVTYQHEKFNLDDWFHISIQFNSSLNLCEPQKLEIEVELLYMDRYHPPQ YESFLKVTKRIVEIPLDPTRLVAAARSLYFDSGYLSAITMCVYSSLVMVATRQRRANA TESVRLEEKRENGVTTLYQLLQTSSVKSTKLRRVYNSSAHALLFATRSIQQFIVRNSE LINASVSVDDLAILDVQTEMKAALLRFDSSEHPTRCVEADISEWSAKITLIYQQMLVL FRRSTELNQQLLLVFDKQRRAVFREAFWITERPIDKCCIRTPVAVLEHYKSIIKVDYL KKLPRCTIFCEETDCPGEYCPIIFEDVFSRNPNEALQVNRTGQEASSTLPNSASMPVV KAHDKHKSFREKIRNETRKLIHPRRKSLDCSQSLSRKVDNKSRNRTKTVIETVSADGV GLLLKTPPSEVVEGIKNVPIASEETVDSPSCHSEPIASPSSSSEYGRCSAAGEFDPAN DQIPLVSKESITSEEVRNALRASVSADDVLSHSARIAGPSKVGTLSQAADQKLTEEHP KDIMAAFELLREREAAKKMLREQANYEGHLYSEQSGKSTFGPVFTPIKSALVIGDPVL RSATKNHLVVFVHGLEGSHEDLVPFRCGLDQAINAHYHGIQMEGEDFEEEPWSFDYLM SSANRSQTWADITTMAHNLLSEVREYVEEARFDIQRISFMAHSLGGVIVRSAVGLAPE LEMQWMVDRCYTLMTINSPHLGLAYVQKHIHWGVQFVKWWKKSRSMEQLSFRDSVEFA SSFVYRTSLNSSCGKFRNVLLVGTPHDQLVPYMSSLLVPSKISSEDQSQFGEAYREMM SACLNSIKNSEKSETLVRYTTFHQLGSSNTQKLTGRAAHVIALEDSVFIEKLFNISAV KYFV" gene complement(<613186..>614055) /gene="Cre-rpl-19" /locus_tag="CRE_29726" /db_xref="WormBase:WBGene00060069" mRNA complement(join(<613186..613315,613418..613668, 613721..613931,614051..>614055)) /gene="Cre-rpl-19" /locus_tag="CRE_29726" /product="CRE-RPL-19 protein" /db_xref="WormBase:WBGene00060069" CDS complement(join(613186..613315,613418..613668, 613721..613931,614051..614055)) /gene="Cre-rpl-19" /locus_tag="CRE_29726" /note="contains similarity to Pfam domain PF01280 Ribosomal protein L19e; contains similarity to Interpro domains IPR000196 (Ribosomal protein L19/L19e), IPR015972 (Ribosomal protein L19/L19e, domain 1), IPR015974 (Ribosomal protein L19/L19e, domain 3); coded for by the following C. remanei cDNAs: DR779812, DR779426, DT936114, DY529178, DT936259, DT935991, DR407268, DT935588, DY525693, DT936699, DR779255, DR777040, DT936953, DR407022, DY529425, DR782502, DR775826, DR778815, DT933405, DR775796, DR776412, DY525204, DR778760, DT934870, DR779568, DT936418, DR778419, DR776301, DR776016, DT936290, DY528933, DR407253" /codon_start=1 /product="CRE-RPL-19 protein" /protein_id="EFP12547.1" /db_xref="InterPro:IPR000196" /db_xref="InterPro:IPR015972" /db_xref="InterPro:IPR015974" /db_xref="PFAM:PF01280" /db_xref="WormBase:CRE29726" /db_xref="WormBase:WBGene00060069" /translation="MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRL VNDGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVL RNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQ ARRDKNKESRKRREERQVVKRAELLRKISQSEKIIAGK" gene complement(<614798..>615522) /locus_tag="CRE_29727" /db_xref="WormBase:WBGene00060068" mRNA complement(join(<614798..614980,615025..615207, 615250..>615522)) /locus_tag="CRE_29727" /product="hypothetical protein" /db_xref="WormBase:CRE29727" /db_xref="WormBase:WBGene00060068" CDS complement(join(614798..614980,615025..615207, 615250..615522)) /locus_tag="CRE_29727" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12424.1" /db_xref="WormBase:CRE29727" /db_xref="WormBase:WBGene00060068" /translation="MPIITFAVGYIYLVFGSFKTFQLIGFGFKFSCILSAILAIIFSW HIYKIAKATSGNLVCPRTFALQMLLTHFSMIVVIIAIASLAWLPQTSATKSVSFALFL FFGYLLNIGAGTFPTFSVADPFYWNQNRSISPSYDRALKSALLGISSYCFAQLTFLWH SVATMGFIFVDVVLMAHYWEIGGVDDWEEPRREENNEILIQENDIVEDLHMD" gene <616564..>619443 /locus_tag="CRE_29505" /db_xref="WormBase:WBGene00060067" mRNA join(<616564..616573,616627..616688,616787..617049, 617273..617387,617446..618057,619232..619388, 619436..>619443) /locus_tag="CRE_29505" /product="hypothetical protein" /db_xref="WormBase:CRE29505" /db_xref="WormBase:WBGene00060067" CDS join(616564..616573,616627..616688,616787..617049, 617273..617387,617446..618057,619232..619388, 619436..619443) /locus_tag="CRE_29505" /note="contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12465.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017441" /db_xref="WormBase:CRE29505" /db_xref="WormBase:WBGene00060067" /translation="MASALDQTDMVQIPNTPTLVAEENVDHKKRVKIQPTAQESFAME HVVHQVQNPEPRLRGPAIKDKSENNARKDRLPLQGEYFDNDKGDRFFFRHKLGDGAMG HVFLSVFGGRTVAIKTEKYSTGMLPMEIKVLLSIKRHQGHHFCDIIDYGTIRREYNYM VISLLGKDLYRLRSEQPSRSFTLNTTTKIALETIDAIDELHKIGYLSRDVKPSNFAPG MREHGQHKTIYMFDFGLAKKYVDRDNRKMKSRGEVGWRGTVRYGSLQAHKRMDLGRRD DVECWFYMLIEMYVGELPWRHMTDRTLVGQAKLSVRNESRQTFFNRIPRQFERIMDMI DAYSFEVRPDYPHLKALINEIRVENNIPDRCKWDWQVEESQHSELTETTSVMSDMAIM AEQGGTNYTDRACENQ" gap 618400..619028 /estimated_length=629 gene <619786..>621242 /locus_tag="CRE_29506" /db_xref="WormBase:WBGene00060066" mRNA join(<619786..620206,620685..620873,620921..621003, 621129..>621242) /locus_tag="CRE_29506" /product="hypothetical protein" /db_xref="WormBase:CRE29506" /db_xref="WormBase:WBGene00060066" CDS join(619786..620206,620685..620873,620921..621003, 621129..621242) /locus_tag="CRE_29506" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12556.1" /db_xref="WormBase:CRE29506" /db_xref="WormBase:WBGene00060066" /translation="MRLLLSILLLIIPLSSCFGIQKKQHVVNFSLKSLDKSSTFDSLD ILNKNFESITKYVNFNGNSSKLNGRIRLNENLEKIILRLANEKIEQSELIENLIQKKS LISDELLVSLGEKNSSYMTVHTDSYRMKIFTSKQIVEKEIILQKSDPNGCQCAHGNCA CCAGISVPEFRHSVCVNATYNPATIGLDLSIGVDGHYFSEEISIRNPPPICFSLPIPG AEHIAGVCVAFTKLDLDRKAEILSGCMDFEVELIHLRVLSFHLGCFRMPI" gene <622380..>623758 /locus_tag="CRE_29507" /db_xref="WormBase:WBGene00060065" mRNA join(<622380..622605,622654..622731,622837..622932, 622980..623069,623522..623598,623645..>623758) /locus_tag="CRE_29507" /product="hypothetical protein" /db_xref="WormBase:CRE29507" /db_xref="WormBase:WBGene00060065" CDS join(622380..622605,622654..622731,622837..622932, 622980..623069,623522..623598,623645..623758) /locus_tag="CRE_29507" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12716.1" /db_xref="WormBase:CRE29507" /db_xref="WormBase:WBGene00060065" /translation="MRIPFAVGLVFIVLYISYKTSERYNVIGYTSKFISEKLGVSQNS GNSSSFFDLKFRLPEALRNIISELEGGDAAENGTVVLLTSEDFKTTVVKVENGTIVKE KLKTALQDVCECYEGNCACCVIVDIPDFSHSVCVNATYNPKLFGLDLAIGFDGHYFMQ DISLRNPPPFCFSLPIPGAEPEMCVAFKNMNVDQKAQVLTGCIELDIDFFHLKLTNID LGCFKMPI" gene <627217..>630875 /locus_tag="CRE_29508" /db_xref="WormBase:WBGene00086101" mRNA join(<627217..627267,627627..627749,627796..627885, 630556..630626,630671..>630875) /locus_tag="CRE_29508" /product="hypothetical protein" /db_xref="WormBase:CRE29508" /db_xref="WormBase:WBGene00086101" CDS join(627217..627267,627627..627749,627796..627885, 630556..630626,630671..630875) /locus_tag="CRE_29508" /note="contains similarity to Pfam domain PF03607 Doublecortin; contains similarity to Interpro domain IPR003533 (Doublecortin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12355.1" /db_xref="InterPro:IPR003533" /db_xref="PFAM:PF03607" /db_xref="WormBase:CRE29508" /db_xref="WormBase:WBGene00086101" /translation="MENGQKDEEEVMPSTSSKLPVQPKNGIMKTYENPSRTFTRPYSA KTVYFYKEGDVFFTGIRVPVSQHRFKTMTTLMDELNQSMFLPYGVRRITTPMGRTNIS SLDQLQHLGRYVASSSNPPKGVDLDKIQEKYSASQRRETQKQTAGGQAYWVGLYKVSK RPRAEIQLLTEYQFVVGSN" gene <631635..>637657 /locus_tag="CRE_29509" /db_xref="WormBase:WBGene00060064" mRNA join(<631635..631715,632260..632367,632448..632528, 632577..632697,632748..632835,632883..633191, 633241..633595,633670..633954,634061..634390, 634434..634740,635010..635090,635140..635350, 635397..635497,635555..635724,635771..635849, 635894..635991,636387..636516,636556..636776, 636826..636912,636955..637072,637123..637244, 637298..637381,637435..637499,637543..>637657) /locus_tag="CRE_29509" /product="hypothetical protein" /db_xref="WormBase:CRE29509" /db_xref="WormBase:WBGene00060064" CDS join(631635..631715,632260..632367,632448..632528, 632577..632697,632748..632835,632883..633191, 633241..633595,633670..633954,634061..634390, 634434..634740,635010..635090,635140..635350, 635397..635497,635555..635724,635771..635849, 635894..635991,636387..636516,636556..636776, 636826..636912,636955..637072,637123..637244, 637298..637381,637435..637499,637543..637657) /locus_tag="CRE_29509" /note="contains similarity to Pfam domain PF01477 PLAT/LH2 domain; contains similarity to Interpro domains IPR001024 (Lipoxygenase, LH2), IPR003533 (Doublecortin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12348.1" /db_xref="InterPro:IPR001024" /db_xref="InterPro:IPR003533" /db_xref="PFAM:PF01477" /db_xref="WormBase:CRE29509" /db_xref="WormBase:WBGene00060064" /translation="MPTTPTLPARIKVAHVLQALQLISAKQVFFVLNGKGKFHRSLIN PMKLPSMEMLLEECSTHLQVAIHRLYTPEGKLIMTVNDILSYDGPRIIACPRNERPHL DEKTNSSNMKLPEIHPNRYAPRQAYTRVVNSIASDTSTGGSAGVMTSGSSSGNSIEKR QRLPVLNTRYIPRKHRENGITSDVANNTTRVAYIAKSYSIKRTAPTTMNRNHIHSTTK EVNKKSKKDDDTAISSAASTAPKDSGTGTSINSQQSDRPESMTERKAQMIRDELRANL HHQHHNQSSSDQYSEEDMIREEESDYDNIGGGIHSGTDDEEDDRDSALGSGGQRRSVK SSHRTPTHRTPSTSGSEQNLSRKSTAGATDSRGKTRTMSRQDTPYQATPSRQSTVISR QETTESSEPKSVHSSRASTASKAIQEVSDEEEEEEEFSRETPAAQTPDTRLQTAKSRR STAGSARSFASESSRAWSRISGYSDKEEILPSDEDDELPKREISTAERALLEEEAAKL KYEKEQEEREEDERLRREYVELCETSKLQSKTKYFLISVTEYSVEILLGERYGIDFDM PLFIVMHGEKGSSQKLYMAENDWLSSELQFYETMQWVVQKFTIPSLGMLKSIDVGHEQ EGYGAGTFIERVVITENTDGQCFQFAVAKWFDSGQVDGLIERHIELKGHMTMMPIEEN KERKVSQGRWEFHLHSLHSELGGTTSNLVVTGYGQLGSSAHEVPNKNLLQDPMASTCI QLDFGQDIGELRKVRFEIDGAGEKPNYYLEKVEATDLDRKQHCVIMVNRWLHTSPTPG FPNWQPFREIALLSTTHFHSSLKTFEGIIRLSDKSLTLYDNSIIYLQCFSREHDDEDI KGNASGIFPVIPVIRDDGEIQYEYNVEFVTQRNDVEFRFIPKLSSFGKDVMDGFGLFK DIFRNMEADRLIDNEALIADELFVEEVIQFNGEHCPYYSVYRTPFISYEPNNPLGPYF KHLINPEHSVFAAIETKQRLESENEGIVTWEVSMSLLEKHTRIPLIPTVVLVGKDDRT FEMECLMENPEHHGDLWYLKYSLTVPNFGNPTRCRISCEETNEKNYTFVHKMFLREKN SNTQVFIKPSIELFGYDTHEYECPYPDIGGWKTVEYMISIETLEGGGDFRPYVNIIGQ KGNTGYRASAMKISEQGIAQVTFTNALSLLDLQSIEVWAKTGHPDNWRGIIEIKGDKK IYQSGELELTKNGQIALSPLTPIAELDDEEYEQEEEDQEGSSEL" gene <638420..>639274 /gene="Cre-dpy-5" /locus_tag="CRE_29510" /db_xref="WormBase:WBGene00060063" mRNA <638420..>639274 /gene="Cre-dpy-5" /locus_tag="CRE_29510" /product="CRE-DPY-5 protein" /db_xref="WormBase:WBGene00060063" CDS 638420..639274 /gene="Cre-dpy-5" /locus_tag="CRE_29510" /note="contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat); coded for by the following C. remanei cDNAs: DT934280, DR408684, DR778894" /codon_start=1 /product="CRE-DPY-5 protein" /protein_id="EFP12383.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR008161" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF01484" /db_xref="WormBase:CRE29510" /db_xref="WormBase:WBGene00060063" /translation="MVKAVVGFGAACGISAIVACLWAALVITNDINEMYDDVMGELGG FRDISDDTWGNLLDVRHGAGESAEQYVRGIFGRHKRSNSQCSCGLPSQGCPAGAPGNP GAPGEPGGTGPDGKNGPPGLPGLNIPIPNDFPKECIKCPAGPPGQDGLPGQEGFQGLP GDAGKRGTPGKDGEPGRVGDIGDQGAPGQDGQPGLAGPPGRDGLTGKGQPGVAGRPGM PGPRGEPGNNGNPGEEGQTGAQGPTGQPGKDGFNGNDGTPGQAGPQGAVGADAEYCPC PERKRRRV" gap 639880..639889 /estimated_length=10 gene <640267..>640934 /locus_tag="CRE_29511" /db_xref="WormBase:WBGene00060062" mRNA join(<640267..640289,640334..640617,640660..>640934) /locus_tag="CRE_29511" /product="hypothetical protein" /db_xref="WormBase:CRE29511" /db_xref="WormBase:WBGene00060062" CDS join(640267..640289,640334..640617,640660..640934) /locus_tag="CRE_29511" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12712.1" /db_xref="WormBase:CRE29511" /db_xref="WormBase:WBGene00060062" /translation="MDTMSSADENQNRMVPSFLPPGNVIGWNLTESVNPITKKKEFTY TVSVQTVGAFGSTETAEGVMTKCDGPCGNRVLSANLIQMGKCDHFLCKACFGIVKNPD GSYGCSNFDCWSEPQANFRKEKANYTKVINKQKSRARKFKKDGEDMKSCTKYDLPKTP VVDSDSERNSKKSSDSDKSSTCSFTKTAELSDS" gene complement(<641298..>642291) /locus_tag="CRE_29728" /db_xref="WormBase:WBGene00060060" mRNA complement(join(<641298..641410,641456..641675, 641723..641850,641901..>642291)) /locus_tag="CRE_29728" /product="hypothetical protein" /db_xref="WormBase:CRE29728" /db_xref="WormBase:WBGene00060060" CDS complement(join(641298..641410,641456..641675, 641723..641850,641901..642291)) /locus_tag="CRE_29728" /note="contains similarity to Pfam domain PF04145 Ctr copper transporter family; contains similarity to Interpro domain IPR007274 (Ctr copper transporter); coded for by the following C. remanei cDNAs: DY528185, DT935562" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12735.1" /db_xref="InterPro:IPR007274" /db_xref="PFAM:PF04145" /db_xref="WormBase:CRE29728" /db_xref="WormBase:WBGene00060060" /translation="MGTRWAILTLLAVTLGVVIAENKVWQFFEIKITIFLKFQSAYAQ AADNFLDELSGKDVEAVKLPEEKSEHAGHDHGEHGGHEGHGDHGGHEDHGAHGAHGGH EGHMMKMWFHGGFEEVILFDFWRTDSLFGMILSCAAIFIMGATYEGVKWFRVFLQINQ SQSQILANKSCVEFALQTTRSSGHQSVSRSHSNKPQSEPFLAATVTRSPANSPFSPHR LIQMLLYILQLVLAYWLMLIVMTYNTYLTAAVVLGAGFGHWLFAVLQLRSSDGEVTDS FQTDACH" gene <642973..>643750 /gene="Cre-atp-3" /locus_tag="CRE_29512" /db_xref="WormBase:WBGene00060059" mRNA join(<642973..643428,643535..>643750) /gene="Cre-atp-3" /locus_tag="CRE_29512" /product="CRE-ATP-3 protein" /db_xref="WormBase:WBGene00060059" CDS join(642973..643428,643535..643750) /gene="Cre-atp-3" /locus_tag="CRE_29512" /note="contains similarity to Pfam domain PF00213 ATP synthase delta (OSCP) subunit; contains similarity to Interpro domain IPR000711 (ATPase, F1 complex, OSCP/delta subunit)" /codon_start=1 /product="CRE-ATP-3 protein" /protein_id="EFP12452.1" /db_xref="InterPro:IPR000711" /db_xref="PFAM:PF00213" /db_xref="WormBase:CRE29512" /db_xref="WormBase:WBGene00060059" /translation="MAQIMKRGFATSAALAKAQLVKTPIQVHGVEGRYAAALYSAGHK QNKLDQISTDLNNVRAVYKDNKKFQEFVLDPTLKALKKKTTIEAVSTKLGLSKETGNF LGAFFNNLFTYINISFSGLLAENGRLNKLESVVASFESIMRAHRGELFVQVTSAEELS SSNQKALSDALSKIGKSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIASRVKKYKDA LATAI" gene <644093..>645208 /locus_tag="CRE_29513" /db_xref="WormBase:WBGene00060055" mRNA join(<644093..644451,644500..644599,644655..645052, 645118..645138,645154..>645208) /locus_tag="CRE_29513" /product="hypothetical protein" /db_xref="WormBase:CRE29513" /db_xref="WormBase:WBGene00060055" CDS join(644093..644451,644500..644599,644655..645052, 645118..645138,645154..645208) /locus_tag="CRE_29513" /note="contains similarity to Pfam domain PF04615 Utp14 protein; contains similarity to Interpro domain IPR006709 (Small-subunit processome, Utp14)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12358.1" /db_xref="InterPro:IPR006709" /db_xref="PFAM:PF04615" /db_xref="WormBase:CRE29513" /db_xref="WormBase:WBGene00060055" /translation="MSDDSDIDDAAHQKLLQSIHTPGTVKKNRLKKSTKSKIDASSLL SHITVSKPSMIKAKKSLGIEDQDTTTKEKSGKKRKSEAAGSEGTSKKKLKSKTLIPLK DVEARKEIEGKIAFTDLKKEVTQNWTELVQSNRISDQLIFPLTKPDGIMWGDEKTEPV LTEKEKEVMKATDIKMAKERLSQMQRMRAIVGIQEAKNRYMKKIKSKGYHRILKREKR KQLLKEFDDLVTRDPSAAHEKLAEMDLQRIMERGSLKHRGQNQKFKQMLEKHASRNPE VKKLLDEHLSKSGLSNRRGKDDDGESTGKEEEYS" gene complement(<645280..>646423) /locus_tag="CRE_29729" /db_xref="WormBase:WBGene00060058" mRNA complement(join(<645280..645465,645746..>646423)) /locus_tag="CRE_29729" /product="hypothetical protein" /db_xref="WormBase:CRE29729" /db_xref="WormBase:WBGene00060058" CDS complement(join(645280..645465,645746..646423)) /locus_tag="CRE_29729" /note="contains similarity to Pfam domain PF03057 Protein of unknown function; contains similarity to Interpro domain IPR004296 (Protein of unknown function DUF236)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12388.1" /db_xref="InterPro:IPR004296" /db_xref="PFAM:PF03057" /db_xref="WormBase:CRE29729" /db_xref="WormBase:WBGene00060058" /translation="MMSVELFGFQVRIIKTTKRNLIFQSILLIFLRLAQLAFVITATT SFLIDCGGNKPDPRKSSAQSTGSTGGTTGGRGDDDDDDDEEEEKKKRKKKKKKAAAAA AKKKAEKEKGKLPPGAPKPPKNRAAIADTHDPNYQTLAGLNDNVFDQKGGGGAPAGGG GPKAPAAGSKPGMAATHDPNYQTLAGLNDNVFEQKGGGGGGGGAPGAPRPPAQAGAKA ATNDPNYQTLAGLNNDVFANKGGGAGGGAGAPPAPKAPAQPGGKAATHDPNYQTLAGL NQDVFGADKKR" gene <646663..>647584 /locus_tag="CRE_29514" /db_xref="WormBase:WBGene00086149" mRNA join(<646663..647373,647423..>647584) /locus_tag="CRE_29514" /product="hypothetical protein" /db_xref="WormBase:CRE29514" /db_xref="WormBase:WBGene00086149" CDS join(646663..647373,647423..647584) /locus_tag="CRE_29514" /note="contains similarity to Pfam domain PF04615 Utp14 protein; contains similarity to Interpro domain IPR006709 (Small-subunit processome, Utp14)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12675.1" /db_xref="InterPro:IPR006709" /db_xref="PFAM:PF04615" /db_xref="WormBase:CRE29514" /db_xref="WormBase:WBGene00086149" /translation="MRAKKRQEAAAVKSISSNTGKSADGPLFEVDETWLKDEKKEKKK KRKELKAKEESRKGTIGKVSYVDKNYDPKLEAKKAETYEEKVEKAVDAAGVHDAEKRQ KEIELDPSKFLELNTNDLTQVSSDFVEKMDQFDEGLFFRSCFYYLLVFSEAAQVINEA FKDDDVIGDFEDAKEGVKQKEKVKDINLNLSGWGSWVGPGITEKKRRRNFVIKAKEKK RKDGERNGLIIAESVTAKDGIGKIQPRSLPFPYTRVEDYEAVLKQPLGLEWNMEKMRD ELCKPAVVVEVKIY" gene complement(<647755..>648108) /locus_tag="CRE_29730" /db_xref="WormBase:WBGene00060057" mRNA complement(<647755..>648108) /locus_tag="CRE_29730" /product="hypothetical protein" /db_xref="WormBase:CRE29730" /db_xref="WormBase:WBGene00060057" CDS complement(647755..648108) /locus_tag="CRE_29730" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12715.1" /db_xref="WormBase:CRE29730" /db_xref="WormBase:WBGene00060057" /translation="MSFFSFATSVVSNMSAMITNAAETVANYVTAETETPIKEVQEKD QEQKKEKKTSDAAVVVEETAIEKKSSEEKIENFDDDFEVISDHDLYVVLYEYDRGIAT EENFFIDLEESTRYH" gene complement(<648923..>649339) /locus_tag="CRE_29731" /db_xref="WormBase:WBGene00060056" mRNA complement(<648923..>649339) /locus_tag="CRE_29731" /product="hypothetical protein" /db_xref="WormBase:CRE29731" /db_xref="WormBase:WBGene00060056" CDS complement(648923..649339) /locus_tag="CRE_29731" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12480.1" /db_xref="WormBase:CRE29731" /db_xref="WormBase:WBGene00060056" /translation="MDSIVSGLYNFVATTVVPAVTEQATNLVGGATALAGGAAHALTQ MSQTALEWGSGSEDATASSDVFSWEQQENAPSIPSEPKTEEEAKVVRQEQAGTSSANT SIEWEVVQENPDETGPVKHNQFEIVQNDYAWMKNSN" gene <651493..>653458 /locus_tag="CRE_29515" /db_xref="WormBase:WBGene00060054" mRNA join(<651493..651781,651837..652024,652059..652342, 652807..652982,653028..653166,653217..653301, 653357..>653458) /locus_tag="CRE_29515" /product="hypothetical protein" /db_xref="WormBase:CRE29515" /db_xref="WormBase:WBGene00060054" CDS join(651493..651781,651837..652024,652059..652342, 652807..652982,653028..653166,653217..653301, 653357..653458) /locus_tag="CRE_29515" /note="contains similarity to Pfam domain PF00085 Thioredoxin; contains similarity to Interpro domains IPR012335 (Thioredoxin fold), IPR013766 (Thioredoxin domain); coded for by the following C. remanei cDNAs: DR781505" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12678.1" /db_xref="InterPro:IPR012335" /db_xref="InterPro:IPR013766" /db_xref="PFAM:PF00085" /db_xref="WormBase:CRE29515" /db_xref="WormBase:WBGene00060054" /translation="MLRWLTLLLALPAILNAEVITVTSQNFEQTIRKCFPHIKILISV ISEANELVFVNFYADWCRFSQMLKPIFLEASEKFKDSAPGKIVWASLDADKNNDIATK YHVNKYPTLKLFRNGEVTKREYRSSRSVEALAAYINKQMEVTVQKFTEKNALQAAHNE KFSMKNHNPFQPEKNTFIGYFNDENSVEYKNLLNVALFYRDECEFMVGIGELNFPGEV PPPGQAPRLVFQPSNKAVNPNQIPFAGDFATYEYLKQWVADKCVPLVREITFQNAEEL TEEGLPFMILFKKSDDKVSEKTFADAIIREIPDQRKSINCLVGDGSIFKHPLSHLGKS ENDLPVIAIDSFRHMYLFKNFEDINVPGKLREFVLDLHSGKLHREFHHGPDPVTGNQA PDTEPPPSTFEKLKPQSSRYTILDKTEL" gap 654618..654627 /estimated_length=10 gene <655490..>657449 /gene="Cre-coq-1" /locus_tag="CRE_29516" /db_xref="WormBase:WBGene00060053" mRNA join(<655490..655533,655971..656076,656127..656240, 656292..656368,656415..656506,656554..656657, 656703..656949,656995..657320,657369..>657449) /gene="Cre-coq-1" /locus_tag="CRE_29516" /product="CRE-COQ-1 protein" /db_xref="WormBase:WBGene00060053" CDS join(655490..655533,655971..656076,656127..656240, 656292..656368,656415..656506,656554..656657, 656703..656949,656995..657320,657369..657449) /gene="Cre-coq-1" /locus_tag="CRE_29516" /note="contains similarity to Pfam domain PF00348 Polyprenyl synthetase; contains similarity to Interpro domains IPR000092 (Polyprenyl synthetase), IPR017446 (Polyprenyl synthetase-related), IPR008949 (Terpenoid synthase); coded for by the following C. remanei cDNAs: DY529441, DT936923" /codon_start=1 /product="CRE-COQ-1 protein" /protein_id="EFP12550.1" /db_xref="InterPro:IPR000092" /db_xref="InterPro:IPR008949" /db_xref="InterPro:IPR017446" /db_xref="PFAM:PF00348" /db_xref="WormBase:CRE29516" /db_xref="WormBase:WBGene00060053" /translation="MGVLPKINIVARQLRKCSMAATSSSPVTATSSDSSFASTAFVQE HVKQMQSDIMDQLIPQDATGAVENLADLNVTSNLGRMTHYYFQQGGKMLRPTVSLLMG NACNSATNRSISDDLLAVPSSDRSGIATHLTVCQNQYKIGMIAEMIHTASLVHDDVID EANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGKPNVISVMASIIEDLVLGE FMQMSATPSEATPQQRMNAYIEKTHRKTASLFASSCRSTAILADPNNLNLHQTAYEYG RNLGIAFQLADDLLDFIATSDEMGKPVAADLKLGLATAPVLYASQQYPELITMLLRKF KHEGDAEKAREIVVNSDGMDKTRQLIDAYSQKAIEMASSLPNRNESTEQLIKLALSQS DRKF" gene <663781..>668033 /gene="Cre-frm-4" /locus_tag="CRE_29517" /db_xref="WormBase:WBGene00060052" mRNA join(<663781..663839,663889..663970,664024..664128, 664261..664312,664635..664710,664760..664978, 665026..665371,665599..665729,665774..665956, 666005..666138,666188..666289,666335..666408, 667521..667595,667672..667851,667899..>668033) /gene="Cre-frm-4" /locus_tag="CRE_29517" /product="CRE-FRM-4 protein" /db_xref="WormBase:WBGene00060052" CDS join(663781..663839,663889..663970,664024..664128, 664261..664312,664635..664710,664760..664978, 665026..665371,665599..665729,665774..665956, 666005..666138,666188..666289,666335..666408, 667521..667595,667672..667851,667899..668033) /gene="Cre-frm-4" /locus_tag="CRE_29517" /note="contains similarity to Pfam domains PF00373 (FERM central domain), PF09379 (FERM N-terminal domain), PF08736 (FERM adjacent (FA)); contains similarity to Interpro domains IPR011993 (Pleckstrin homology-type), IPR014847 (FERM adjacent (FA)), IPR014352 (FERM/acyl-CoA-binding protein, 3-helical bundle), IPR000299 (Band 4.1, N-terminal); coded for by the following C. remanei cDNAs: DT937168, DT935661, DY527482" /codon_start=1 /product="CRE-FRM-4 protein" /protein_id="EFP12455.1" /db_xref="InterPro:IPR000299" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR014352" /db_xref="InterPro:IPR014847" /db_xref="PFAM:PF00373" /db_xref="PFAM:PF08736" /db_xref="PFAM:PF09379" /db_xref="WormBase:CRE29517" /db_xref="WormBase:WBGene00060052" /translation="MPQNNTSSSSFLGRLTTSTRSSFMSPKDVRCNVHLLHDSDIIGN EFPRTQSAQTILDYVCEMKHIREKDFLGLRYQDHNKHRYWLDLTRSIGHVVKHFRTET MTLHLRFRYYPAEPARLRDPNLRYQLFVQLQRDLLHGRLYCPTSSAAELAALILQTQL GDHDEEKHIGNYVSGYKLLLKQTPKLEERIAQFHKQMKGKTSEDAELEFLEKASQLDT YAFDPYTIKDPQDSGPVYLGASCKGILIYAGQSRTHNIEWNELVKVDYSGKEIRLTLS DTYRGQVTAAGTPTGTLNGHGPGSPISGTSGMDKYQVKKPMTLKYTCPSAQFAKHLWI HILSQQAFFNETSAHDVKLKFSKPRIPLLSRGSTFRFPSKRVYREIEEDDAKSMLFDK SILETSAVMNETTTSNENAEESILNCSTMSVPTSTCSGVVRYELPRQTPRTEQPWLKP TSLKVTASHDNTDTIASSSSSPDSSTENQNNNLSKITDLNVDMGGEGSSSPSSTSPVV PIIHTQQNSDHNSQNLLGKSSNGKLANGGYSSDEFEKKTVHTNGHALITTSEKQDSLV DLDESTTSTKKSLVSRVANTCFVAFLILLLIIAVVIVLFERSEGSAHNDFIEKNRALS DLRHLYYEPTRHYVVEQYRKYFGPKI" gene <668703..>670411 /locus_tag="CRE_29518" /db_xref="WormBase:WBGene00086154" mRNA join(<668703..668813,669054..669658,670291..>670411) /locus_tag="CRE_29518" /product="hypothetical protein" /db_xref="WormBase:CRE29518" /db_xref="WormBase:WBGene00086154" CDS join(668703..668813,669054..669658,670291..670411) /locus_tag="CRE_29518" /note="contains similarity to Paramecium tetraurelia Chromosome undetermined scaffold_96, whole genome shotgun sequence.; TR:A0EH68" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12689.1" /db_xref="WormBase:CRE29518" /db_xref="WormBase:WBGene00086154" /translation="MAIGISVFIGISTAIWLIVGCGGKKKKNAPKGAGGAKYKSFQAP TPPAPPAAPKADSKMKAPEEKEKSKKSEKKDEPKKEEEKKEKSKKSEKKDDKKEEKKE EKKEEKKEEEKKEKSKKSEMKDDDKKDDDKKDEEKKDDKEKKDEKKEDEKDKDDDKDD KKEEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKEEEKKEEKKEEKKEEEKKEEKK EEKKDELKPHGKQSVPVIIASIHISPRLVLNGCRPRVDPYGSIMDPSDIPTASARSAF HP" gene <670573..>671112 /locus_tag="CRE_29519" /db_xref="WormBase:WBGene00060051" mRNA join(<670573..670597,670693..670822,670867..670975, 671023..>671112) /locus_tag="CRE_29519" /product="hypothetical protein" /db_xref="WormBase:CRE29519" /db_xref="WormBase:WBGene00060051" CDS join(670573..670597,670693..670822,670867..670975, 671023..671112) /locus_tag="CRE_29519" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12459.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CRE29519" /db_xref="WormBase:WBGene00060051" /translation="MGRRRITAVTVEPAGDLGFQADQQEQKKITLTNTHDKKIMFKIK TSDNLVYLVNPVFGTIEPGKTAEITVTRNKAPGKEAKLVIVNSVFSGDDKDLAKSFKT AKPTGGQVTVKIAAK" gap 680486..680495 /estimated_length=10 gene <697624..>700384 /gene="Cre-pqn-44" /locus_tag="CRE_29520" /db_xref="WormBase:WBGene00060050" mRNA join(<697624..697686,698172..698345,699012..699127, 699177..699797,699909..700221,700271..>700384) /gene="Cre-pqn-44" /locus_tag="CRE_29520" /product="CRE-PQN-44 protein" /db_xref="WormBase:WBGene00060050" CDS join(697624..697686,698172..698345,699012..699127, 699177..699797,699909..700221,700271..700384) /gene="Cre-pqn-44" /locus_tag="CRE_29520" /note="contains similarity to Pfam domain PF07984 Domain of unknown function (DUF1693); contains similarity to Interpro domain IPR012937 (Protein of unknown function DUF1693); coded for by the following C. remanei cDNAs: DY527637" /codon_start=1 /product="CRE-PQN-44 protein" /protein_id="EFP12317.1" /db_xref="InterPro:IPR012937" /db_xref="PFAM:PF07984" /db_xref="WormBase:CRE29520" /db_xref="WormBase:WBGene00060050" /translation="MRGRRSRTVIAYDQYGNIQKTLAPHGSNRMRNNGYHGNQNQNNQ YHHQNNSAQCHQNQGYPEPVIEQIVERTMLLAKGQMKRLRAVLDERVEIHGRGNFPTI SARLVDLIRCLRQCLGSVDVRARDVRLNGGAASFVASSEDFTYADLDLIFPIQIDNEG DENAQKIIFDSIRDAVFMTIRELMPDNIGKEKFDFETLKDVYIRKMIKVSGDNDTWSL FSLNNEYGRCIELKFVNKMKRQFEFSVDSFQIHLDPLLDDIDGVEQKKVTIESMYGDV HQAMTHLHERLIDTVKPEEIRGGGLLKYCHLIIRGYKPAKPWNCQKLEKYMCSRFFID FPDLISQENKLRNYLDSHFGTSFNGVTYDQWSSSGSDTDSEASTSQATTSSLLVTGQA KYDFLMLLYRVINESTVCLMAHERHMTLNMIDRVAFQLSMQCYPPPTFSSGSSTPPRT TLFYLPPDAATWIPVI" gene complement(<701165..>704365) /locus_tag="CRE_29732" /db_xref="WormBase:WBGene00060049" mRNA complement(join(<701165..701276,701324..701628, 701672..701911,701958..702304,702355..702530, 702579..702754,702802..703534,703577..704157, 704204..>704365)) /locus_tag="CRE_29732" /product="hypothetical protein" /db_xref="WormBase:CRE29732" /db_xref="WormBase:WBGene00060049" CDS complement(join(701165..701276,701324..701628, 701672..701911,701958..702304,702355..702530, 702579..702754,702802..703534,703577..704157, 704204..704365)) /locus_tag="CRE_29732" /note="contains similarity to Pfam domains PF02170 (PAZ domain), PF02171 (Piwi domain); contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR003100 (Argonaute and Dicer protein, PAZ), IPR005829 (Sugar transporter, conserved site); coded for by the following C. remanei cDNAs: DY525683, DT937207, DR407472, DT933401, DR776022, DY527487, DR775732, DT934521, DR781444, DY527339, DR776622, DR780183, DR781414, DY528775, DR408931" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12604.1" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /db_xref="InterPro:IPR005829" /db_xref="PFAM:PF02170" /db_xref="PFAM:PF02171" /db_xref="WormBase:CRE29732" /db_xref="WormBase:WBGene00060049" /translation="MPPHPPAPPMPPMPPMPPVTVPPMTPMAPTPANQQDMHQQTGND ACIKRLQQLNVEEAPKVYLKPSEPGKLGKPTDIQTNIFGIEVEKETIVYRYMVHAKAD ISPTKEATFTKKGKEDFVVLDRHEKCCNIFFHAVEKNPDFFKIKDGNNIIYDGQSTLY TTTSLFSVTDTKDKKSRIFEINGADTSNEDLRSLACILLEIYAPRDNSLVISAENLGR RTADQNTEVNNREYTQFLELALNQHCVRETARFGCFEHGKVYFLKPTEEGFDPRDCIS VGDGKVLHPGVKKSIQYIEGPYGRGQNNPSIVIDGMKAAFHKEQNVAEKIYEITGREP SKTLNDFDREKASHVIKALDCYTTYSNRQRHLRIEGLHHDCAAKARFELPDGKSCTVQ QYFQDKYNVQLKYPEGNLLICKERGNRNFYPAELMNITKNQRVTIPQQTGQQSQKTTK ECAVLPDVRQRLIVTGKNAINITEENELLKNLGIKVYPEPLMVKARELEGKEILYDRK VNTESGKWRAPPGGYNKPCAFPDLWAMYAVGTQQSRFSAGDLNNFSNMFMETLQRKGI KVPTPAETCLLHADQIMDKLQSVSESKCKFVFVITDDNITHLHQKYKALEQRTMMIVQ DMKMSKAVSVAKDGKRLTLENVLNKTNMKLGGLNYTVSDAKKSLTDEQLVIGVGISAP PPGTKFILEGKGHLNPQIIGFASNAIANHEFVGDFVLASVGQDTMSSIEDVLKSSLDM YEKNRKTLPKRIIIYRSGASEGSHPSILAYEIPLARAIIHGYSKDIKMIYIVVTKEHS YRFFRDELRGSKATDMNIPPGIVLDSAVTHPACKQFFLNAHTTLQGTAKTPLYSVLAD DCNAPMDRLEELTYTLCHHHQIVALSTSVPTPLYVANEYAKRGRALWAEKTEGAPIEN EGSESNRLKDLTKELAYQQTDLHNKRVNA" gene <705156..>705963 /locus_tag="CRE_29521" /db_xref="WormBase:WBGene00060048" mRNA join(<705156..705452,705498..705643,705687..705834, 705880..>705963) /locus_tag="CRE_29521" /product="hypothetical protein" /db_xref="WormBase:CRE29521" /db_xref="WormBase:WBGene00060048" CDS join(705156..705452,705498..705643,705687..705834, 705880..705963) /locus_tag="CRE_29521" /note="contains similarity to Homo sapiens Isoform 5 of RING finger protein 212; ENSEMBL:ENSP00000372428" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12516.1" /db_xref="WormBase:CRE29521" /db_xref="WormBase:WBGene00060048" /translation="MEFIVCNKCGCSPSKRQFYITSCSHVFCETCRTTPTPDYCHLCK IPAKSLKMDGSLPKNVKKVFTDIGTLSADINRRLSKIIGFQKFQKSIQLKMENKRSAM RKEQIGKIEKKTQEFSGQLTKLSSFEESNRKKLEDTEKENEKLKHLIKSLELEIASAV PLADSDNEDDFFLKNTPTSSNPSVAGSITDNEDMFEFDLLGLKNRSDSSSSSCSSQSN RAGSLF" gene complement(<706134..>707196) /locus_tag="CRE_29733" /db_xref="WormBase:WBGene00060047" mRNA complement(join(<706134..706616,706670..706803, 706847..707034,707081..>707196)) /locus_tag="CRE_29733" /product="hypothetical protein" /db_xref="WormBase:CRE29733" /db_xref="WormBase:WBGene00060047" CDS complement(join(706134..706616,706670..706803, 706847..707034,707081..707196)) /locus_tag="CRE_29733" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PTB0" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12341.1" /db_xref="WormBase:CRE29733" /db_xref="WormBase:WBGene00060047" /translation="MSKKDSKDDTQFLSLWQNSENLAKMESHAMNRGLVAATRDSSSD PSNRSTLWTNLSSMSSADQAHLMSRLSSTWPFREERRALTWPVHAGLLANCVTSSLIA TRINSEMFLYDAKAKFLDSVKRCPKSPFVFGVYSSGVTYFMLHQMLVTPKVFNELTPC PSCLVINSIAIGLTTGIALPMLATPYLAHYVLINKEAAAGGSKSMPVVNNLLEFLTLG WEGSKPARSVMATCAAIQMVVSFGAMYAMLWGRERMFNTLELDSDLARRLVAEAQTSN SFKQKILDFLRRIPLVNGAIPESPENERVV" gene complement(<708212..>712326) /gene="Cre-ppk-1" /locus_tag="CRE_29734" /db_xref="WormBase:WBGene00060046" mRNA complement(join(<708212..708313,708360..708463, 708563..708817,710240..710324,710369..710445, 710641..710902,710951..711211,711238..711450, 711497..711614,711785..711860,711916..712123, 712177..712217,712272..>712326)) /gene="Cre-ppk-1" /locus_tag="CRE_29734" /product="CRE-PPK-1 protein" /db_xref="WormBase:WBGene00060046" CDS complement(join(708212..708313,708360..708463, 708563..708817,710240..710324,710369..710445, 710641..710902,710951..711211,711238..711450, 711497..711614,711785..711860,711916..712123, 712177..712217,712272..712326)) /gene="Cre-ppk-1" /locus_tag="CRE_29734" /note="contains similarity to Pfam domain PF01504 Phosphatidylinositol-4-phosphate 5-Kinase; contains similarity to Interpro domains IPR002498 (Phosphatidylinositol-4-phosphate 5-kinase, core), IPR016034 (Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup)" /codon_start=1 /product="CRE-PPK-1 protein" /protein_id="EFP12441.1" /db_xref="InterPro:IPR002498" /db_xref="InterPro:IPR016034" /db_xref="PFAM:PF01504" /db_xref="WormBase:CRE29734" /db_xref="WormBase:WBGene00060046" /translation="MSARTTTIAFTRTGDADEEGKPPEQSGESGEKQEAPILRPDNEA KDLPLNTTLGNQTSREPQNTKEKLGHRRIDEQGGVSYKKVPTNALMQAIQLGISNSIG SLASLPNRDVLLQDFEKVDIIAFPAAGSSITPSHSFGDFRFRTYAPIAFRYFRNLFHI KPADFLRSICTEPLKELSNAGASGSIFYVSQDDQFIIKTVQHKEADFLQKLLPGYYMN LNQNPRTLLPKFFGLFCYQFATLIFQSLGKNIRLLVMNNLLPQTVTLHEKYDLKGSTY KRMANKAERAKPHPTLKDLDFLENHKDGIFIDPIALDALMRSISRDCLVMESFKIMDY SLLVGIHNVELGIRERAELNGEAMPAPSTSNEQTGEKGENHKVLQEKFSVWDTGDGDV PHGGVPARNSNGDRLVLYLGIIDILQNYRLLKKMEHTWKAILHDGDTISVHNPNFYAS RFLSFMTEKVFKKGTALKQSPSRRRMMKGSSHEDDTTVIVGTGHRQHRESEREGLNMT VTVPDGGASTSTPREQAQFGSQTARESTRLYNRDVSAMAEDRANSARDPVSSMSRVPL RRSYRDAGQAMSVEKKEKKVERLFAQPKPTDEKVPEEQEETEEIVSGDTATA" gene complement(<713746..>715977) /gene="Cre-dhs-2" /locus_tag="CRE_29735" /db_xref="WormBase:WBGene00060045" mRNA complement(join(<713746..713836,713883..714018, 714065..714140,714288..714483,714529..714682, 714735..714876,715518..715591,715639..715824, 715914..>715977)) /gene="Cre-dhs-2" /locus_tag="CRE_29735" /product="CRE-DHS-2 protein" /db_xref="WormBase:WBGene00060045" CDS complement(join(713746..713836,713883..714018, 714065..714140,714288..714483,714529..714682, 714735..714876,715518..715591,715639..715824, 715914..715977)) /gene="Cre-dhs-2" /locus_tag="CRE_29735" /note="contains similarity to Pfam domain PF00106 short chain dehydrogenase; contains similarity to Interpro domains IPR000194 (ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding); coded for by the following C. remanei cDNAs: DR408089" /codon_start=1 /product="CRE-DHS-2 protein" /protein_id="EFP12597.1" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00106" /db_xref="WormBase:CRE29735" /db_xref="WormBase:WBGene00060045" /translation="MPSVNMSLSLSTNVTDKEHKTDFESFSVDMIGFVGWILNLTVLE ATLWIGVLFVLFLVIRHFLERIQIGDLSRKAVFITGCDTGFGRGLALKCLENGMPVFA GCLTQQGIESLSAEARKSIGNGRSLDAFLMDVTSDESVGKVARRLEEKCEKFGGLHAL VNNAGITGKHIADDFLDMNEYLKVAEINLWGPVRATMAVKKLLKKARGRVIQVASICA RVGLPGLGPYTVSKYGVSAYCDVIRQELRPFGISVHILEPGFFDTPLINRQKIDAEIS EAWEQAPSDVKKEYGEKFFNDARQSTQLFLNSIASSQISLVIDAYYHAITAKYPRSRY QIGWDSILLFIPFSYLPTGLQDYIFAAAGLFLPKPACH" gene <716338..>719881 /locus_tag="CRE_29522" /db_xref="WormBase:WBGene00060044" mRNA join(<716338..716706,716752..717051,717099..717530, 717577..717879,717921..718133,718185..718574, 718622..718883,718928..719238,719284..719459, 719512..>719881) /locus_tag="CRE_29522" /product="hypothetical protein" /db_xref="WormBase:CRE29522" /db_xref="WormBase:WBGene00060044" CDS join(716338..716706,716752..717051,717099..717530, 717577..717879,717921..718133,718185..718574, 718622..718883,718928..719238,719284..719459, 719512..719881) /locus_tag="CRE_29522" /note="contains similarity to Pfam domains PF05127 (Putative ATPase (DUF699)), PF08351 (Domain of unknown function (DUF1726)), PF00583 (Acetyltransferase (GNAT) family); contains similarity to Interpro domains IPR013562 (Region of unknown function DUF1726), IPR000182 (GCN5-related N-acetyltransferase), IPR007807 (Protein of unknown function DUF699, ATPase putative)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12307.1" /db_xref="InterPro:IPR000182" /db_xref="InterPro:IPR007807" /db_xref="InterPro:IPR013562" /db_xref="PFAM:PF00583" /db_xref="PFAM:PF05127" /db_xref="PFAM:PF08351" /db_xref="WormBase:CRE29522" /db_xref="WormBase:WBGene00060044" /translation="MRTKLDGRIRTQIENGVATGHRSMFALVGDKSRDQVPILYHILS KSTVSARPNVLWCYKKELSFSTHRQKKAKKMKKATTTISGSLPDADPFDVFISSTQIR YCYYNETEKILGNTFGVLVLQDFEAMTPNLLARTIETIEGGGMVILLMQSVRSLRQLY TISMDVHNRYRTEAHNEITARFNERFILSLASCSSILVLDDQLRVLPISSHIENVEAI PASQKKSQSEADAELAGLKEAMKETKPIGPLLSRARTACQAKALLRFLDVITEKQSNV TCSLTAGRGRGKSAAVGLSLAGAIAFGYTNIFVTSPSPENLKTLFEFIVKGFDALDYQ EHTDYELIQSANPEFKNCLVRVNVFREHKQTIQYISPTDVQKLGQCELIVIDEAAAIP LPLVKELISGPYISFLASTINGYEGTGRSLSLKLLQQLRQQSAGGEAKEGKSASSKGR TLHEMHMEESIRYKPGDKIEKWLNKLLCLDATNCQLKLECGTPPPSACELYIINRDSL FSFHDASESFLQQVMAIFVSAHYKNSPNDLQMLSDAPAHNLFVLMAPIDKNRKTLPEV LAVVQVCLEGRLDSDNIENGLESGKRAAGDLLPWTVSQQFMDKRFGTLCGGRIVRVAV HPDYQSMGYGSRAVQLIEQYYLGLATSLDEEETVPQKKNVIKQVNDGHTVELLEERIE PRADLPPLLQRLDERKPEKLDYLGVSFGLTVPLLKFWKRCEFVPVYVRQNSNDITGEH TCIMLKGLEHASADSDEEPVATWLPVYWREFRRRLVNLLSFDFSTFPAQMALSLLQLK NKNVEKQMKRLVIERPELALHLSNTDLRRMGQYGRNMVDSHIITDILPIIGKLYFEQR MPQELKLAVTQAAILLARGLQHKQFDDISKELDLPMNQVFALLTKAVRRIGDWFDEVC ESAVRENLDKESEAAAASKPISTLPKAVPLANLEDELDAAAKEIRARHDRDRKALLAE LGSDLQKYEITQDEKELAEAYEAVNMKYANKLVSVKSKRTAVQAQIPDAKDPLEKKSK KKKRFSNGGRH" gene complement(<720199..>723412) /locus_tag="CRE_29736" /db_xref="WormBase:WBGene00060043" mRNA complement(join(<720199..720288,720343..720455, 720500..720558,720606..720667,720712..721235, 721286..721620,721670..721816,721862..722074, 722125..722270,722315..722552,722608..722681, 722729..722781,722827..722953,723001..723112, 723159..723274,723323..>723412)) /locus_tag="CRE_29736" /product="hypothetical protein" /db_xref="WormBase:CRE29736" /db_xref="WormBase:WBGene00060043" CDS complement(join(720199..720288,720343..720455, 720500..720558,720606..720667,720712..721235, 721286..721620,721670..721816,721862..722074, 722125..722270,722315..722552,722608..722681, 722729..722781,722827..722953,723001..723112, 723159..723274,723323..723412)) /locus_tag="CRE_29736" /note="contains similarity to Drosophila melanogaster Flybase gene name is CG8568-PA; FLYBASE:CG8568" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12583.1" /db_xref="WormBase:CRE29736" /db_xref="WormBase:WBGene00060043" /translation="MSLNDTFSAIASSPHGSRMDESFNESFRDKNTLPPTTIFRCLQK EHEQISAVLRLHSPLTAQYQSSLIELISLYERAEELSTMGMQRLILSVFLKLAANILT VLGKLTYQPTLYKLSQLIASSIVPDLKPDEKEEATHLQKWADRVVLETAIHMIDYPNY ELDVEINIDGIVDDLLLASSNIQFVRNSIFVAALKLASEMDVNVHIGFKSKLTLENIS DEYFLRLLLWLYLRNKNVLKTDLLSSLFSTLPLTMNAQEYNKSSECSLLDVNLYLVSL AVVASTTSESGLTFKSAPVIAPQLSLTKHQKDCWKAIVDTSLNRPVPALARLRTSQLV ESVRLISNGSEDVRVLFEAWKTCLQPSATHDENVYEAIKTVTDKYITKMNSLLAYGPF YSTDAFYCAIPSSVSRRDMKTLFPLQFDYEFVNTTEAEHIGTVINSLEGYMSPEQEEI QKEEEEALSIRDDGSFGDDTFHSFGSASDNYTSANNSQFFSPLSHNRESMLPSAVSQL IRDDIANTSHFSTKSVILTPTRATASPTQSVFDKKLTPLSFERHQTIVTPSKKGNKSD DSGEDEEEDELEAALLESTQKHERSILAQKTPEKPALVQKPMPTPTKDAQTETDASIT SSGEGSIISVRYTPRQETKGDKKIETLYSSESEADEYEDEDDEEDEEDIEYDEDEETE AEEDDDELLTEEQMEDMMGQILEATTTMFRDLRMKKFAIESQKIQFDNTTDDEILRQA ELKLAKINSDISATSDRLIKIRTPSVTTVFTPHAPLQATPHVANQLIKKSSVDHDPKQ CLGCQSDDVQEASLRRLEQMALDWDAEGNDYLYE" gene <724777..>726720 /gene="Cre-apm-1" /locus_tag="CRE_29523" /db_xref="WormBase:WBGene00060042" mRNA join(<724777..724818,725131..725287,725381..725579, 725626..725767,725882..726241,726289..>726720) /gene="Cre-apm-1" /locus_tag="CRE_29523" /product="CRE-APM-1 protein" /db_xref="WormBase:WBGene00060042" CDS join(724777..724818,725131..725287,725381..725579, 725626..725767,725882..726241,726289..726720) /gene="Cre-apm-1" /locus_tag="CRE_29523" /note="contains similarity to Pfam domain PF00928 Adaptor complexes medium subunit family; contains similarity to Interpro domains IPR008968 (Clathrin adaptor, mu subunit, C-terminal), IPR001392 (Clathrin adaptor, mu subunit); coded for by the following C. remanei cDNAs: DR780473, DY526934" /codon_start=1 /product="CRE-APM-1 protein" /protein_id="EFP12703.1" /db_xref="InterPro:IPR001392" /db_xref="InterPro:IPR008968" /db_xref="PFAM:PF00928" /db_xref="WormBase:CRE29523" /db_xref="WormBase:WBGene00060042" /translation="MSISGLFILDLKGNVVISRNYRGDVDMSCIEKFMPLLVEKEDEG TASPVLVHQGISYTYIKYMNVYLVTISKKNTNVILVLSALYKIVEVFCEYFKTLEEEA VRDNFVIIYELFDEMLDFGYPQTTESKILQEFITQQGNRLETVRPPMAVTNAVSWRSE GIKYRKNEVFLDVIESVNMLANAQGTVLRSEIVGSIRFRVVLSGMPELRLGLNDKVFF QQAGASSRRGGNSGKGVELEDIKFHQCVRLSRFDSERTISFIPPDGEFELMSYRLTTQ VKPLIWVEASVERHAHSRVEYMVKAKSQFKRQSVANHVEVIIPVPSDVSAPKFKTGAG TAKYVPELNAIVWSIRSFPGGREYIMRSSFMLPSITSEEVEGRPPINVKFEIPYYTTS GLQVCLLFNLMLFHILLFKVRYLKIIEKSGYQALPWVRYVTQNGDYQLRMT" gene <727278..>727815 /locus_tag="CRE_29524" /db_xref="WormBase:WBGene00086138" mRNA join(<727278..727340,727386..727501,727746..>727815) /locus_tag="CRE_29524" /product="hypothetical protein" /db_xref="WormBase:CRE29524" /db_xref="WormBase:WBGene00086138" CDS join(727278..727340,727386..727501,727746..727815) /locus_tag="CRE_29524" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12599.1" /db_xref="WormBase:CRE29524" /db_xref="WormBase:WBGene00086138" /translation="MVSSPAIHVTATLEDDVLSVTTSWTILRDNNCDVYRKQETTRSA RGIAVDITISCTHRRVCGSVRGPGPAVPISCDVFNRNM" gene complement(<727932..>729282) /locus_tag="CRE_29737" /db_xref="WormBase:WBGene00086163" mRNA complement(join(<727932..728044,728094..728227, 728307..728475,729228..>729282)) /locus_tag="CRE_29737" /product="hypothetical protein" /db_xref="WormBase:CRE29737" /db_xref="WormBase:WBGene00086163" CDS complement(join(727932..728044,728094..728227, 728307..728475,729228..729282)) /locus_tag="CRE_29737" /note="contains similarity to Homo sapiens family with sequence similarity 98, member B isoform 1; ENSEMBL:ENSP00000380734" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12732.1" /db_xref="WormBase:CRE29737" /db_xref="WormBase:WBGene00086163" /translation="MRGITVLCLLTICLACFVAQTEAQRGGGRGGGGGRGGGGGGRGG GGWGGGGRGGGRGRWGGRGGSSSYSSSRSYSSSRRGGVDLVDLLLFGSAAYGMNNGYG GGGGYGYSGYGYGQQCRVAQFVDYVGQVPRYYCDCPPYAPHYQYYTCSSSYGKR" gene <730850..>731933 /locus_tag="CRE_29525" /db_xref="WormBase:WBGene00060041" mRNA join(<730850..731115,731625..731776,731821..>731933) /locus_tag="CRE_29525" /product="hypothetical protein" /db_xref="WormBase:CRE29525" /db_xref="WormBase:WBGene00060041" CDS join(730850..731115,731625..731776,731821..731933) /locus_tag="CRE_29525" /note="contains similarity to Acidobacteria bacterium Putative uncharacterized protein.; TR:Q1IRT5" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12385.1" /db_xref="WormBase:CRE29525" /db_xref="WormBase:WBGene00060041" /translation="MLSSRNSNILLSSVFFPGLVLAEHGDHGGHDHGGHDHDHGGHDH HDHDHHDHHHGGWGGGHDHGSGGDNNGGGGWGGGYRPWTGFGGRGYYGGGGGGGLLAR LFGWRRRRPYYYGNGNGGYYGGYSGYPNYGYSQGFCRLSQFVDYVGRTPRFYCDCPPY PPNYQWNQCSPMPVYG" gene <732820..>733809 /locus_tag="CRE_29526" /db_xref="WormBase:WBGene00060040" mRNA join(<732820..732871,733326..733640,733691..>733809) /locus_tag="CRE_29526" /product="hypothetical protein" /db_xref="WormBase:CRE29526" /db_xref="WormBase:WBGene00060040" CDS join(732820..732871,733326..733640,733691..733809) /locus_tag="CRE_29526" /note="contains similarity to Medicago sativa Cold and drought-regulated protein CORA.; SW:Q07202" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12734.1" /db_xref="WormBase:CRE29526" /db_xref="WormBase:WBGene00060040" /translation="MQNSILLLAFAVIAAFFVISCEAAHDHHGGGGGGGSDHHSGGGG GHHHHGGDGGGGGHHHHHSHHYDSGSSFSGSDSSSYSGGSGYGGGGFLTRLLFGGLFR RPSYYPSYYGYGNYNRGYCRVAQFVDYVGRTPRYYCDCPPYPPNYQWNQCVPMNAYGK K" gene <735322..>735578 /locus_tag="CRE_29527" /db_xref="WormBase:WBGene00086145" mRNA join(<735322..735401,735452..>735578) /locus_tag="CRE_29527" /product="hypothetical protein" /db_xref="WormBase:CRE29527" /db_xref="WormBase:WBGene00086145" CDS join(735322..735401,735452..735578) /locus_tag="CRE_29527" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12656.1" /db_xref="WormBase:CRE29527" /db_xref="WormBase:WBGene00086145" /translation="MNIFSIISFTLILIASLFEHVNAQALSPWGKIGLAALGGAVVDR TFSRQPTNNYYYSYPGYYTYGKKK" gene <735942..>737233 /gene="Cre-spe-11" /locus_tag="CRE_29528" /db_xref="WormBase:WBGene00060039" mRNA join(<735942..736001,736047..736335,736474..736599, 736647..736801,736848..736952,737019..737116, 737161..>737233) /gene="Cre-spe-11" /locus_tag="CRE_29528" /product="CRE-SPE-11 protein" /db_xref="WormBase:WBGene00060039" CDS join(735942..736001,736047..736335,736474..736599, 736647..736801,736848..736952,737019..737116, 737161..737233) /gene="Cre-spe-11" /locus_tag="CRE_29528" /codon_start=1 /product="CRE-SPE-11 protein" /protein_id="EFP12555.1" /db_xref="WormBase:CRE29528" /db_xref="WormBase:WBGene00060039" /translation="MSDELDISAALGNKTPVKNTRKRKSTSKEESGEESPEKTEFPSV FGAIGTPMAKVENAKEWDEWKEKELEKERRKWKRYLRSKWDLEQDKLPKKSDSKHYLG RHDHYANIKKAREEVADGLDAIHEMNFNVGKGAAINIQVNGKEIPKKKTKKFAAAVEK ALAEMGNPSINEMWTDDMDEEEKRAEAEWARKRAKKVKALREIDADIQEFEENDRGRL FVPWDEYCREQEEKGKADKIGENHYKKWLEKKMDENKVSSKFNAYQLDLICLDEDAFK DKKSLKSVVKGVQNFYRKMRGPKKD" gene complement(<737509..>742946) /gene="Cre-aman-3" /locus_tag="CRE_29738" /db_xref="WormBase:WBGene00060038" mRNA complement(join(<737509..737667,737773..738232, 738343..738668,738717..738827,738870..738960, 739152..739279,739330..739658,739716..739854, 739905..740082,740530..740619,740669..740755, 740800..741151,741206..741333,741512..741680, 741736..741853,741908..742078,742566..>742946)) /gene="Cre-aman-3" /locus_tag="CRE_29738" /product="CRE-AMAN-3 protein" /db_xref="WormBase:WBGene00060038" CDS complement(join(737509..737667,737773..738232, 738343..738668,738717..738827,738870..738960, 739152..739279,739330..739658,739716..739854, 739905..740082,740530..740619,740669..740755, 740800..741151,741206..741333,741512..741680, 741736..741853,741908..742078,742566..742946)) /gene="Cre-aman-3" /locus_tag="CRE_29738" /note="contains similarity to Pfam domains PF07748 (Glycosyl hydrolases family 38 C-terminal domain), PF01074 (Glycosyl hydrolases family 38 N-terminal domain), PF09261 (Alpha mannosidase, middle domain); contains similarity to Interpro domains IPR015341 (Glycoside hydrolase, family 38, central region), IPR011682 (Glycosyl hydrolases 38, C-terminal), IPR000602 (Glycoside hydrolase, family 38, core)" /codon_start=1 /product="CRE-AMAN-3 protein" /protein_id="EFP12400.1" /db_xref="InterPro:IPR000602" /db_xref="InterPro:IPR011682" /db_xref="InterPro:IPR015341" /db_xref="PFAM:PF01074" /db_xref="PFAM:PF07748" /db_xref="PFAM:PF09261" /db_xref="WormBase:CRE29738" /db_xref="WormBase:WBGene00060038" /translation="MMRYIYHFIKALIFLFPSSPFLPPPPFRVPPYASPLLFSCSNSE CTLYFLLLNDYYYMFPHSFIKYSFLFCSLYTPFFQISLLSANEMYRLAVSAKRKVLLN PRTFFVYFVAIFFTFLLAYHHRIGQFQNRDDIHYSRIINMRSSSREENITQNKPIHEK PKRVKSNDGGVCSRPPDETKTDFNTFDLFEKVVAGGGSLPQASKKTRTEKLKVYVLPF THVDPGWLETFESYTKRTNQILDNMHQFMMKNEKMRFMWAEFVFFERWWSLQKDQVKD DVKKLVSEGRLELATGSWVMTDEANPYFPVSVDNIVEGFQFIYHNFGIKPKTIWSNDP FGYSSSVPYLFKKSGVHRNVINRIHHKIKGTLQSQQAIPFNWRQYFDGDGEDDVLTQV LPYTHYDVLNSCGSDASVCCEFDFKRITHWSCPGPKPVNIDSSNVAAKAEKLTTQLER MSEMYKAPVILMMHGDDFRFDMIEEWNQQHDNFLPVFDEINKGSRVEIRFGTFTDYFD ELEKWYSENKDSQPSTLSGDFFPYMCALGDYWTGYYTTRPFFKRQGRLLHSLIRNSDI MLSMLRENLKQRKIVENEKRLEQARRSLSLFQHHDAITGTSKVSVMDNYSELLHDSII STKIVLENLTKSDIDIYPRVHDGVEIQQVVDFEKKEKEVKIFNSLLFTITDVFGIRVN NREVVVSIEGKTVEAQLEPYFQKGKAEADSFTLLFKATVPPLSMIKVKIQKGDSEGMT KMAKVEAKDSSAWELGNNWKVEASTESSSEMETPFLKATFDPTGSLQTVTKQNDKSKF DCQQSWHQYREAGGGAYLMRLHTNPKEVTEFQWMRITGPLRHSVYQKSKNILQRTSIV NVEGPSGEEVDISMSIDITSERNTELMTRFSTKWEKPITFTDSVGMQLLRRDYYKMPV QNNYYPMPTAAVLQNGKQRVSIVSNVEHGARFLENGSVEVNIDRILNQDDGKGLGSGS DAIPVDMKPVDMKFKLVFDQLDHEDPPKIHYSTHSFRAQQAVQSVIYPPILFDGNPKK EEDIEEIEENSNLNFPCDVQLLTVRPLSESRQLMIFYRHATSCSSEKMNNCGADFKTS LIDLLVKLGVKQVQKTDLSGVTRIGEMVKVEYLSDVELKTFDFLTLVLYR" gene complement(<746161..>747481) /gene="Cre-fbxa-145" /locus_tag="CRE_29739" /db_xref="WormBase:WBGene00060037" mRNA complement(join(<746161..746482,746528..746631, 746676..746744,746841..747327,747372..>747481)) /gene="Cre-fbxa-145" /locus_tag="CRE_29739" /product="CRE-FBXA-145 protein" /db_xref="WormBase:WBGene00060037" CDS complement(join(746161..746482,746528..746631, 746676..746744,746841..747327,747372..747481)) /gene="Cre-fbxa-145" /locus_tag="CRE_29739" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box); coded for by the following C. remanei cDNAs: DR779770, DR780127" /codon_start=1 /product="CRE-FBXA-145 protein" /protein_id="EFP12331.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29739" /db_xref="WormBase:WBGene00060037" /translation="MGNEMSSPKTLTSFEKWNDLPPEMKLECIDHLDFKTRFLLRSTS RTERALVDAHQFQMGHVQMQGLLPYPINAIIPSGYDAQKLTIIPSLNSQKEIYVISVR NATRFTETIVPLLVFILKTSIISEFSIEMIRQRDWVNVFGNMLEPASFRIKNFHGVIL SHQETMFFVSKLHSINESIHLDANGCQKFPMERLIEDPAILNAKLLGIRDLPNKDAVW KLAEKWIENDSPIGTTFRVTSTNHHSFHQFAVVFKDRLISETNEEILIKTDNPSKHIL LKLARRCRVSRPLICIVVSSETKELEFETFGKWVTKKMMPLSEYLSFLFVEDMNEEDD LNGSSFIILMLHCVWLLITMILKCLFGRN" gene <748706..>749635 /locus_tag="CRE_29529" /db_xref="WormBase:WBGene00060036" mRNA join(<748706..748865,748909..749043,749088..749344, 749390..>749635) /locus_tag="CRE_29529" /product="hypothetical protein" /db_xref="WormBase:CRE29529" /db_xref="WormBase:WBGene00060036" CDS join(748706..748865,748909..749043,749088..749344, 749390..749635) /locus_tag="CRE_29529" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12405.1" /db_xref="WormBase:CRE29529" /db_xref="WormBase:WBGene00060036" /translation="MSSSDGYSYSQSSGDSSPKTELNNEQIHALLNKLSSDEQKELTE MMRTCTTEACYNDTWVTNHWSRSRKFLPSQTTSPRSISFRSEGMAILRNYGSGVTPLL LRILCLWARVETGSNQELISFGIRYVSHNKSLQNMNFQYNLAQSATNYDEIRRQNRGG AGETSISRMQTNQREPVHAPQRAEKPNPYDYTYSVPTEETSSYGDSFTSYKPLIGETS EFQQSPRVRRPSPPISSSFTEEDSGFMSGTPSGQPSSSEKTSGYTFQ" gene <750089..>750636 /locus_tag="CRE_29530" /db_xref="WormBase:WBGene00060035" mRNA join(<750089..750163,750213..750350,750478..>750636) /locus_tag="CRE_29530" /product="hypothetical protein" /db_xref="WormBase:CRE29530" /db_xref="WormBase:WBGene00060035" CDS join(750089..750163,750213..750350,750478..750636) /locus_tag="CRE_29530" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12633.1" /db_xref="WormBase:CRE29530" /db_xref="WormBase:WBGene00060035" /translation="MPNSTCKPFPCRNPDNFSKYCEKKELGKKTDDKMPVVHRNVEGE NNGECFKIKGPKTPFLLTHLEKNYVDKPKEEPTTSEPTTSKGTKREHSVSDSDQELED PNEPSTSSSTTRKRPRAQQNS" gene <754392..>754687 /locus_tag="CRE_29531" /db_xref="WormBase:WBGene00060034" mRNA join(<754392..754439,754490..>754687) /locus_tag="CRE_29531" /product="hypothetical protein" /db_xref="WormBase:CRE29531" /db_xref="WormBase:WBGene00060034" CDS join(754392..754439,754490..754687) /locus_tag="CRE_29531" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12371.1" /db_xref="WormBase:CRE29531" /db_xref="WormBase:WBGene00060034" /translation="MPGDENAVGTETSEEKPTTSNESTTEDQTPRSDESPAHPQKRVK TGQPTSSSSCSLFFLQQNPKITHSSISLHLSHYFRVV" gene <755273..>755311 /locus_tag="CRE_29532" /db_xref="WormBase:WBGene00086133" mRNA <755273..>755311 /locus_tag="CRE_29532" /product="hypothetical protein" /db_xref="WormBase:CRE29532" /db_xref="WormBase:WBGene00086133" CDS 755273..755311 /locus_tag="CRE_29532" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12568.1" /db_xref="WormBase:CRE29532" /db_xref="WormBase:WBGene00086133" /translation="MEKSREFRDIIL" gene <755796..>766217 /gene="Cre-let-526" /locus_tag="CRE_29533" /db_xref="WormBase:WBGene00060033" mRNA join(<755796..755804,757748..758546,758747..758940, 759000..759414,761978..763180,763287..763927, 764003..765057,765107..765416,765498..765609, 765664..766010,766080..>766217) /gene="Cre-let-526" /locus_tag="CRE_29533" /product="CRE-LET-526 protein" /db_xref="WormBase:WBGene00060033" CDS join(755796..755804,757748..758546,758747..758940, 759000..759414,761978..763180,763287..763927, 764003..765057,765107..765416,765498..765609, 765664..766010,766080..766217) /gene="Cre-let-526" /locus_tag="CRE_29533" /note="contains similarity to Pfam domain PF01388 ARID/BRIGHT DNA binding domain; contains similarity to Interpro domain IPR001606 (AT-rich interaction region)" /codon_start=1 /product="CRE-LET-526 protein" /protein_id="EFP12504.1" /db_xref="InterPro:IPR001606" /db_xref="PFAM:PF01388" /db_xref="WormBase:CRE29533" /db_xref="WormBase:WBGene00060033" /translation="MREGEDADKYAASVAEVAHGGGGPAKKDESAPASVSNAPPPTPP QPQIVPPPQQHQHPPQQQQQPPQPHHPQPPQHPPNVPPNSFAPPPGHHPPHPGMPPMD WRPPPPGAEHQMPPGYPPGYPPYGMPPRHHPGYPPPPPHAYGYPPPAGAYGYPPQMMR PPMMGPGDMVRMPPGPTPTEWAAQQQQAQAAARAGVPPTKEGPNGNPATPSSSSQPIP SPSASSIAEESLDEKPSGTKMPPQQTPQPPQIMSPAPPHTPQAPTQQASASASATPST PSETPRASGKVLSKAELLEKLVGPVTHHNPIHVMHERRMFFERLIDFCERNGGEPITM VPQVSKQSIDLHRLYIGVRAKGGFQQVTKDKYWKNLCTEANPDLAESSAAGYQLRKHY QKHLLMLECRETGRNPEDEVAFADKMKRQRKREPGGAAAAAAVAAAAAAQQGGDQKTQ PGAPGGSGLPPPGPPGPPGPYPGNGAPGGAPGAPPQFPGHPGMDPNYHYYQQHGMMPP PHPGHPGYQHMNAFSPGQYPGHQRPPGAPGAPPPGAQAMRAPMPQHMQEMDEHQRQWY AQQHAHQQAAAAHHHAQQQAAAQAQAAQAQAAQAQQASTPASSTTPAPPTAPSSQAAP ASGSNTQPATPSASNQPPTPAPASTLQVDPSSATGGSQAGSRAPSVGPGPSATPDSSS LPSTGVDAQPTTSSETSTPGEPGTSTPTETPAPSTSAAPPTPGQPPQHQQQPPGPPGP PGPQHPYPGYPGYPPPGAMRPGGFAPPPGAPYGYPGGPPPQQPGFHASHPQHPQHAQY LAWQQQRYHQHQQQQQQQQQQQGVPGAPRPPYPYPGGPVPPGAQQNRMQPPPPAQGAA SPSGGSGSSGKQARYGTPAPPSRATAPTPQPLAATIPIVPPSTSGQPTPTAGSYLAST LATPGQAHIPSSSQPTQHMMSQQHQHQYPPGCIEATATSQAQVKRRKVYARELINATP RRLIMSLRSGLEAEAIWAINALNVLLYDDTNPQPSLQQMPGLVNVIVEHLYATLSILY PSEFQLTEPGKPIILDDSEELIDKLMKPERNEDMKMIVAKMPVVPRKGSDKTATFTMM SRNGLQVHYRDESIPVSLLKRVTREHSERDAESLIDNSISSKFVAERNSVGLGGGLAE RIATRLRDKLFHEKTRPRPVFSKYMKDDDEEIETSLELNVKKEEIEDETEKDVLLMRG ARPDELSDCKHEVELAWPRQTALSPRSKAMDDLAHRALALSNILRGFSFVPGSDHLMA KNEALLFIIGRFMRLNVNERKISTKRPGAVLNLEELKKDPKSLTEDEKRAKERSILDE ADVTTAQMVETANTLRDDAFVMLTHMSVSLNLYELPDAIAYPIYDGLLRWAVSRVPEA TDSTIPAPVSPRDYSLEIMCKMVVIERNVDMFLSTGSWSRVEQFVHILSRLLTMNEET HYREFAIVILNALCIASEAVCFICAMETTTISNLILFVDSADQNMHQVMQAHGMNALR DNPELMGTSVGMLRRAASMLRLLVKVPQAYKIYLKHQTRLLQFTMSQLMDSRVAGMVA DTLYEIQEYVKEFGEDIPEPLKITYSEGYQPSMMDEKESPSASEPEPEKKKPVEEPPV EEPPKETVEEVITPSENIHGNGTVECDTNRPSSSEGISSYENHHKNEEEESKKDTDEG ESCDGYESESLRLSQKRSAAALIDEVSQSRSPPPTKRACLTNGFDKSKSSVSTNGTLS EAAQNDGALTTAVA" gap 761850..761859 /estimated_length=10 gene <767260..>768656 /locus_tag="CRE_29534" /db_xref="WormBase:WBGene00060032" mRNA join(<767260..767315,767371..767430,767478..768050, 768094..768162,768209..768352,768395..768514, 768560..>768656) /locus_tag="CRE_29534" /product="hypothetical protein" /db_xref="WormBase:CRE29534" /db_xref="WormBase:WBGene00060032" CDS join(767260..767315,767371..767430,767478..768050, 768094..768162,768209..768352,768395..768514, 768560..768656) /locus_tag="CRE_29534" /note="contains similarity to Staphylococcus aureus Serine-rich adhesin for platelets precursor (Staphylococcus aureusssurface protein A).; SW:Q6GDE9; coded for by the following C. remanei cDNAs: DR777857, DT935194, DT934492" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12322.1" /db_xref="WormBase:CRE29534" /db_xref="WormBase:WBGene00060032" /translation="MSESTVSFSLLTDENGKIKVDFNGADKKHVSCFDSDSQRLSPCP SLASLVSTTVESEVLEAGKRRRVVSISTASLNTTDTFFDNEDIVQRTSTPLPHDNDDT DSISEVSFTSCVSKMSELSVAKSCSQETVTSAYMRDKEFQNDNISVSNENKHEDGIAD GDWRTVKRNSGSSNRADNFNVSNSFDTFRKVGELPPRNLISYEKKNKERYGGWEKVGD WRQDMKKPKEAKLATSSTYSTPMSSSFSQNSPYQGSANSSHSKSRIPSLMNPPVYYSP NSSRLIPSNRVSASTGSYASAASSKTHIPPLMTPKIAPIVHKVPPTIKKQPVKLTITT DSAGNMKINFSNECSQESWSVTGAIGRSQKIEVHKMLN" gene complement(<768971..>771211) /locus_tag="CRE_29740" /db_xref="WormBase:WBGene00060031" mRNA complement(join(<768971..769243,769298..769491, 769542..769715,769762..770210,770277..770386, 770438..770656,770702..771012,771059..771115, 771169..>771211)) /locus_tag="CRE_29740" /product="hypothetical protein" /db_xref="WormBase:CRE29740" /db_xref="WormBase:WBGene00060031" CDS complement(join(768971..769243,769298..769491, 769542..769715,769762..770210,770277..770386, 770438..770656,770702..771012,771059..771115, 771169..771211)) /locus_tag="CRE_29740" /note="contains similarity to Pfam domains PF03143 (Elongation factor Tu C-terminal domain), PF03144 (Elongation factor Tu domain 2), PF00009 (Elongation factor Tu GTP binding domain); contains similarity to Interpro domains IPR000795 (Protein synthesis factor, GTP-binding), IPR004160 (Translation elongation factor EFTu/EF1A, C-terminal), IPR004161 (Translation elongation factor EFTu/EF1A, domain 2); coded for by the following C. remanei cDNAs: DT934496, DT936164" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12509.1" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004160" /db_xref="InterPro:IPR004161" /db_xref="PFAM:PF00009" /db_xref="PFAM:PF03143" /db_xref="PFAM:PF03144" /db_xref="WormBase:CRE29740" /db_xref="WormBase:WBGene00060031" /translation="MSRHRNIRNINIEDEMDDDYDDYDDYEDEEESEKPYTYDRNSLS ANYYTYLTDSGRDSPTPTAPPPAANVPTSSYYPPVSTASPTVAPAFSASIVRNMTAPL LQQHQKPPKNVNNRPSTPQGASNVNTPKRTQQVKNLQAESATPNVSRPSSEVDLTAYR RNQLQNIAKAPSVPRKTPKPRVAEKDLINLIVVGHVDAGKSTLMGHLLHDLEVIDTRT IDKFRHEAARSGKASFAFAWVLDETEEERERGVTMDIGRTSFETSNRRIVLLDAPGHK DFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLVVAVNK LDTVEWSFERFEEIRNNLSVFLTRQAGFSKPIFVPVSGFTGENLVKRMDLDWYDGPCL LELIDNFVAPQPPSDGPLRIGISDVHKVSANQVVVSGKIESGEVDKDDKVYIMPSVIP ATIKDCASNNGSKHYFAGDYIMFTLQGTFEPESVQVGSVVVKSGPDTLIPSRKFQVRL VVFEIATPIIKGAKSELYAHSLCIPCTFTKLIHTINKSNGEVLKQKPRFIAKGMSAVV EIETDHDVAIEAFTSCRALGRVTFRSGGNTIAAGIVEKSITPQ" gene complement(<771473..>772861) /locus_tag="CRE_29741" /db_xref="WormBase:WBGene00060030" mRNA complement(join(<771473..771625,771734..771883, 771935..772099,772146..772216,772267..772486, 772535..772623,772669..772732,772781..>772861)) /locus_tag="CRE_29741" /product="hypothetical protein" /db_xref="WormBase:CRE29741" /db_xref="WormBase:WBGene00060030" CDS complement(join(771473..771625,771734..771883, 771935..772099,772146..772216,772267..772486, 772535..772623,772669..772732,772781..772861)) /locus_tag="CRE_29741" /note="contains similarity to Pfam domain PF00312 Ribosomal protein S15; contains similarity to Interpro domain IPR009068 (S15/NS1, RNA-binding); coded for by the following C. remanei cDNAs: DY525599" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12439.1" /db_xref="InterPro:IPR009068" /db_xref="PFAM:PF00312" /db_xref="WormBase:CRE29741" /db_xref="WormBase:WBGene00060030" /translation="MINLRRLVHTSCRLERGRTAFYNVHQKVTDPAKQDPDYFEKKAR ELPLDQNYIDALSKLYYEKIGSERDLGLKAADNLILEKTEFGLPRIEKSKIRVKYEDL DVLSNAPESVKKVFSVEMATRRELSQEWKESLIKSVRQHSLDGSSLEMKIAWLTALIR HWSLLVNDIGQETKKKPTWLTHRIWLVINERRKALRILRERNEAAFENTIAALKISYH VPKQPAHVKTRKAWAEAQLKLRVENEKEKRLEELHERYDKQVEDHKRETEEKRKALNN ELDKLAEDMRRIDVIEGKAFETVGKYEPSLISSLTETVIHSNLFYHPPPTMSEK" gene <773497..>773938 /gene="Cre-asg-1" /locus_tag="CRE_29535" /db_xref="WormBase:WBGene00060029" mRNA join(<773497..773721,773768..>773938) /gene="Cre-asg-1" /locus_tag="CRE_29535" /product="CRE-ASG-1 protein" /db_xref="WormBase:WBGene00060029" CDS join(773497..773721,773768..773938) /gene="Cre-asg-1" /locus_tag="CRE_29535" /note="contains similarity to Pfam domain PF04718 Mitochondrial ATP synthase g subunit; contains similarity to Interpro domains IPR016702 (Mitochondrial ATP synthase subunit g, animal), IPR006808 (ATPase, F0 complex, subunit G, mitochondrial); coded for by the following C. remanei cDNAs: DR775852, DT934062" /codon_start=1 /product="CRE-ASG-1 protein" /protein_id="EFP12745.1" /db_xref="InterPro:IPR006808" /db_xref="InterPro:IPR016702" /db_xref="PFAM:PF04718" /db_xref="WormBase:CRE29535" /db_xref="WormBase:WBGene00060029" /translation="MATHKLSFFEKIANTAGALYRHQAQQFPRRLAILKAVGKHELAP PRSADLPAIKADWAKVQKFIQTKQYTNLTVKEGLVYTAVALEVIFWFFVGEMIGRRYV YGYIVPSDYVSKDTKAKVAEQKRIAALEA" gene complement(<774058..>775219) /locus_tag="CRE_29742" /db_xref="WormBase:WBGene00060028" mRNA complement(join(<774058..774217,774260..774553, 774603..774717,774764..774882,774928..775046, 775094..>775219)) /locus_tag="CRE_29742" /product="hypothetical protein" /db_xref="WormBase:CRE29742" /db_xref="WormBase:WBGene00060028" CDS complement(join(774058..774217,774260..774553, 774603..774717,774764..774882,774928..775046, 775094..775219)) /locus_tag="CRE_29742" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12552.1" /db_xref="WormBase:CRE29742" /db_xref="WormBase:WBGene00060028" /translation="MARENIVMNSRGQKIEVEFGRLREYYLYTFAPNKEFVSVRDHVA HDKALDNLREKQRINIAQRKDKQATKIQLLKEYEQSKSVMEDPMTPRIAGTTQRERKE DTVVEAKATTPVPLHVEKFVLNTTDDKRKTFHESWFRQPMSRCQRKKTDDIFWISGNE DDQSVDDDPEGKYTVTAETMIETLTAGGNVKDSGVVEPTSSKTIMTDPLKTVYTRYKN SCGKEIVFLNTLKGTIDFIKKQPPEKTNKSNTISVEEPTDVLNQITFGPTIITHVFKG RRLKRQNKGRKGVETFEENRKEYTRESGEETSGV" gene complement(<775821..>776726) /gene="Cre-pbs-7" /locus_tag="CRE_29743" /db_xref="WormBase:WBGene00060027" mRNA complement(join(<775821..776102,776156..776267, 776313..776491,776537..776642,776695..>776726)) /gene="Cre-pbs-7" /locus_tag="CRE_29743" /product="CRE-PBS-7 protein" /db_xref="WormBase:WBGene00060027" CDS complement(join(775821..776102,776156..776267, 776313..776491,776537..776642,776695..776726)) /gene="Cre-pbs-7" /locus_tag="CRE_29743" /note="contains similarity to Pfam domain PF00227 Proteasome A-type and B-type; contains similarity to Interpro domains IPR001353 (20S proteasome, A and B subunits), IPR016295 (Proteasome endopeptidase complex, beta subunit); coded for by the following C. remanei cDNAs: DY527176, DR779504, DY526249, DR780115" /codon_start=1 /product="CRE-PBS-7 protein" /protein_id="EFP12727.1" /db_xref="InterPro:IPR001353" /db_xref="InterPro:IPR016295" /db_xref="PFAM:PF00227" /db_xref="WormBase:CRE29743" /db_xref="WormBase:WBGene00060027" /translation="MNAHDELQRTLNPTCTGTSVIALQYKTGVVVLTDRVVSYGKMAR YKNVSRQYKVNDNVLIAFGGDHADFHWLQNVIERQVLLWKRFDQDIGPKALHGYLTSL LYGRRCKMNPIWNTLVVAGVEEEEKNNKETSTPFIGVITQKGCAYQVKHIATGLGAFL LNQAVEDEWRKKGEDLSREDAEAVLRKSLELTIYHDCVADNEFEIGRVDATEGVVLGK EEKVIGDWSIAETNCQYE" gene <777032..>777862 /locus_tag="CRE_29536" /db_xref="WormBase:WBGene00060026" mRNA join(<777032..777474,777519..777681,777731..>777862) /locus_tag="CRE_29536" /product="hypothetical protein" /db_xref="WormBase:CRE29536" /db_xref="WormBase:WBGene00060026" CDS join(777032..777474,777519..777681,777731..777862) /locus_tag="CRE_29536" /note="contains similarity to Pfam domain PF07572 Bucentaur or craniofacial development; contains similarity to Interpro domain IPR011421 (Bucentaur or craniofacial development)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12613.1" /db_xref="InterPro:IPR011421" /db_xref="PFAM:PF07572" /db_xref="WormBase:CRE29536" /db_xref="WormBase:WBGene00060026" /translation="MASQHEKDEEEYNSSSDEDYDPSKDTEHNQQDEVRVPRYRAFIA YSPPQIDDAEDGEEVADEDVEYLQKDSKSQKKEENSEESSTTNGDDVDVDAIFAALTG QAPPVSTASSSSSSNSKTEIKVPHATEPSSSSSSEVKESPKVYPRTTEISEKGDVGTS SAGKKRVGLLDAAKALTKRSKMSVLEKSDQDWKDFTRQNNLKEDLESHNRGKGGYLNK MEFLNRTDNRQFEKERAFRASARKDTN" gene complement(<778620..>781064) /gene="Cre-tlf-1" /locus_tag="CRE_29744" /db_xref="WormBase:WBGene00060025" mRNA complement(join(<778620..778676,778759..778825, 778878..779521,779568..779663,779714..779998, 780046..780161,780417..780489,780537..780641, 780822..780939,781027..>781064)) /gene="Cre-tlf-1" /locus_tag="CRE_29744" /product="CRE-TLF-1 protein" /db_xref="WormBase:WBGene00060025" CDS complement(join(778620..778676,778759..778825, 778878..779521,779568..779663,779714..779998, 780046..780161,780417..780489,780537..780641, 780822..780939,781027..781064)) /gene="Cre-tlf-1" /locus_tag="CRE_29744" /note="contains similarity to Pfam domain PF00352 Transcription factor TFIID (or TATA-binding protein, TBP); contains similarity to Interpro domains IPR012295 (Beta2-adaptin/TATA-box binding, C-terminal), IPR000814 (TATA-box binding); coded for by the following C. remanei cDNAs: DY528902" /codon_start=1 /product="CRE-TLF-1 protein" /protein_id="EFP12415.1" /db_xref="InterPro:IPR000814" /db_xref="InterPro:IPR012295" /db_xref="PFAM:PF00352" /db_xref="WormBase:CRE29744" /db_xref="WormBase:WBGene00060025" /translation="MQMGDHQMMGNQRTFVQKVIPAQAGGTVPQNVAYVQNQGVRMVQ QDLNGQQRIMQPMVRPVPQNGTGPHFVRQVPAGQGFQANYGQGGTIAGRSVAGGAPIR NGMQQQVYQRPAGAIPVVTPIPQQQQPRTVYIQQGHQVMQGHHRPPQQRIFQNQQQHQ QQHQQNFNQQPHNNQMMIQQQIRQQQAQHHQMGQPQMARHQMVQQHQQQIQQRRIQQP QQPQQQQVFPPRGMNLAVPLREPSPEPVIIKREEPENPPPSSSMKQEEPMPDDSDIDI QIRNVVCNYTLPLHIDLRKLAMNTHNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIV GCRSEEDCKRAARSIARHVQRVMGKTKEKVQIRNYRVSRSKSHLNMKFMFQVNNVLAT CRLPFGIKIEEVAAKYPSESTYEPELSVGLVWRSITPKATLRIHTTGSITVTGASSEA DVLEVLSKIYPIVLEFRCHERAKGNVAAQKKRKRKAPTNTRAPAVKRERFDDANYGNS GVINNQVYFSDEDEDLYDDLDLDD" gene <781754..>784114 /gene="Cre-cdk-8" /locus_tag="CRE_29537" /db_xref="WormBase:WBGene00060024" mRNA join(<781754..781989,782040..782324,782372..782888, 782936..783019,783079..783363,783413..783508, 783812..>784114) /gene="Cre-cdk-8" /locus_tag="CRE_29537" /product="CRE-CDK-8 protein" /db_xref="WormBase:WBGene00060024" CDS join(781754..781989,782040..782324,782372..782888, 782936..783019,783079..783363,783413..783508, 783812..784114) /gene="Cre-cdk-8" /locus_tag="CRE_29537" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="CRE-CDK-8 protein" /protein_id="EFP12580.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE29537" /db_xref="WormBase:WBGene00060024" /translation="MIDENFKKRLAVSRERVEDLFYFENSKEIGRGTYGLVYKAVPKH PNGRFPNKEYALKMIEGQGFSMSACREIALFRELRHPNLICLQRVFLTNEKKVWLLLD YAEHDLWHVIKHHRTAKTKKVPIMVPRNMVKNILFQILSGMHYLHSNWVLHRDLKPAN ILLMGDGPPDMRGRVKIADLGFSRIYANPLKPMAELDPVVVTFWYRAPELLLGAKHYT KAIDVWAIGCIFAELLTAEPLFFCKEEDIKAQNPYHYDQVKRIFHLLGYPSDTDWPDM KKMPDHARLLNDARNEGTPIQTFPNSLQRYFDKWKINSQSSPYRLLVKLLTVDPTKRV SCEEAMNDIYFRKMKRPPRETDDVFNKYPIPYAKKEQQMTVPIDHVQQQQQQQQQQQQ QQQQQQQQQQVQMQQPQMGPPQMMGQPQMVQPQMVQNQMGPPQMGQPQMGQPPMGGPH PGVVPQDPHAHQMMQQQHHMQYQQMHDPMQGGMDEGPQAKMMRMGNVPVPRYGPMPPP YGGPQDYHNQQGPPMMQMMQQPGPSGYYGQRPGQPQVPGPGPQGYMNPQMGMQMGMRP PGVPPQAYMQQGRGMPPQMGQPGPSQQQQWQQYHR" gene complement(<784474..>803797) /gene="Cre-cle-1" /locus_tag="CRE_29745" /db_xref="WormBase:WBGene00060023" mRNA complement(join(<784474..784542,784595..784698, 784751..784833,785010..785314,785370..785489, 786008..786195,786905..787516,787858..787990, 788509..788826,793675..793761,793972..794129, 794176..794249,794295..794392,795107..795216, 800878..801162,801528..801776,801809..801990, 802036..802294,803161..803355,803719..>803797)) /gene="Cre-cle-1" /locus_tag="CRE_29745" /product="CRE-CLE-1 protein" /db_xref="WormBase:WBGene00060023" CDS complement(join(784474..784542,784595..784698, 784751..784833,785010..785314,785370..785489, 786008..786195,786905..787516,787858..787990, 788509..788826,793675..793761,793972..794129, 794176..794249,794295..794392,795107..795216, 800878..801162,801528..801776,801809..801990, 802036..802294,803161..803355,803719..803797)) /gene="Cre-cle-1" /locus_tag="CRE_29745" /note="contains similarity to Pfam domains PF06482 (Collagenase NC10 and Endostatin), PF00041 (Fibronectin type III domain) (2), PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR008957 (Fibronectin, type III-like fold), IPR003961 (Fibronectin, type III), IPR010515 (Collagenase NC10 and endostatin), IPR016186 (C-type lectin-like), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CRE-CLE-1 protein" /protein_id="EFP12375.1" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR010515" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00041" /db_xref="PFAM:PF01391" /db_xref="PFAM:PF06482" /db_xref="WormBase:CRE29745" /db_xref="WormBase:WBGene00060023" /translation="MIGSTHFFFFLLIFGLLYSTGALFQHEDRVPNAPQNVRVKTQST SATLWWDAPPDPTVLIRGYTVEYGEGSISQRILIEGPDSTSFTVTRLAPSTNYVFAVS AYNEAEGEDGTKVMVAAKTRQAEGSQTEKLWPPTSVRARVDEKAIPGSAIVSWDDPNP ENAADNSIDSTQRQYVINYGIYESDAQQKVRSNAKAVRLTGLLPGKEYEVAVKVVAGD GSESPWSIRDLFLVPESEFPTKTTSRFDWFCRLNDTEMCAIDSSPHWKLCTEKHDTYT QRDAGACPRVQYPSSPAHLTTPAINLPDAQRLCFYFRFALLNFHPGLMKVEIYSDGDH SNRQIVWKTRMANVRTHAVQNVYIPFGQQVRPFKVREISVKSHFRKISFQVSVSLKWD GQPMPRVIVHEMDVLSGGCSERSTDSETEVDLLAPVKASLNADARVFRAKGIESLPAI GLQRGVEIAVPYRLYLPRNFFKQFSLLATIKPMDKRGGYLFAAVNAYDSAVDIGLLIE PAGTKQTNISLIVRSVAIVSFLVEDFSQQWTQFALEVIDQTVTFYFKCRRFASRQVTT LPDFSFDEAEKLYIASAGPIIDNGFEMRRLVALFVVHLLFVSVLGGAEELENEDFPLL SSEQVQPEVREFSTSPEDSSLPGTVFQVVPFEDARVRQARASSEEKEITSNSVMIPVE MVEVIDDGNLFEDDGKGVEGSGTPDEFKKSPESNEIQQIAELPPTPAPPPPYPTPQMA VQDLRSYEQHAATTPFQGVSESGGHCTKVCQGAPGPQGPAGKDGIPGSHGHQGERGAD GQPGMHGSRGEQGPPGPPGMPGLAGPPGPPGSGSGGVGSGATGPQGPPGLPGAPGRDG ADGAEGQRGPQGPPGPKGDEGPGAGGRMSDEDIDRCAQRLKETMQLDIEPMRGDLPEY NPKVHSHTTKGEKGERGPPGAPGAPASAGGFGGVNLGTNVHATTVELFASARATSIGQ MAFATSSQQLFIRVNNGWKEVLLGGHIHPSLETKQSTQNSRQNDAAQPERQVAAPWRP RVNLEEPQRDSGSNNKDRVIHMIALSQPFSGNIHGLRGADLQCYREARAAGYSTTFRA MLSSNVQDLVRIVHSVDFDTPVVNVAGHHLFASWRSFVNGAQMSQYAKLFSFDRHDVL NDSRWPDKRVWHGSKDGGIRADQYCDGWRRSDASLTSLAGHISSNTSIFQSSGTTKCE NKLVVLCVENMSKYHGDRILRLNRITSDFKI" gene complement(<806262..>807828) /gene="Cre-pas-4" /locus_tag="CRE_29746" /db_xref="WormBase:WBGene00060022" mRNA complement(join(<806262..806375,806464..806760, 807384..807635,807730..>807828)) /gene="Cre-pas-4" /locus_tag="CRE_29746" /product="CRE-PAS-4 protein" /db_xref="WormBase:WBGene00060022" CDS complement(join(806262..806375,806464..806760, 807384..807635,807730..807828)) /gene="Cre-pas-4" /locus_tag="CRE_29746" /note="contains similarity to Pfam domain PF00227 Proteasome A-type and B-type; contains similarity to Interpro domains IPR001353 (20S proteasome, A and B subunits), IPR000426 (Proteasome alpha-subunit, conserved site); coded for by the following C. remanei cDNAs: DT933791, DR778878, DY525738, DT934703" /codon_start=1 /product="CRE-PAS-4 protein" /protein_id="EFP12479.1" /db_xref="InterPro:IPR000426" /db_xref="InterPro:IPR001353" /db_xref="PFAM:PF00227" /db_xref="WormBase:CRE29746" /db_xref="WormBase:WBGene00060022" /translation="MNRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVI GVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDP VTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVAN STGRGEKPVREYLEEHYSEENTADEATTLKLVVKSLAQVVPPGSQNIEIAVMKKVNDE LQQRVLTIDEIEALLKVVEAERVAAEAEEAASKKK" gap 806858..807312 /estimated_length=455 gene <808112..>809198 /gene="Cre-rpb-3" /locus_tag="CRE_29538" /db_xref="WormBase:WBGene00060021" mRNA join(<808112..808234,808279..808413,808463..808881, 808934..809022,809071..>809198) /gene="Cre-rpb-3" /locus_tag="CRE_29538" /product="CRE-RPB-3 protein" /db_xref="WormBase:WBGene00060021" CDS join(808112..808234,808279..808413,808463..808881, 808934..809022,809071..809198) /gene="Cre-rpb-3" /locus_tag="CRE_29538" /note="contains similarity to Pfam domains PF01000 (RNA polymerase Rpb3/RpoA insert domain), PF01193 (RNA polymerase Rpb3/Rpb11 dimerisation domain); contains similarity to Interpro domains IPR011263 (DNA-directed RNA polymerase, RpoA/D/Rpb3-type), IPR011262 (DNA-directed RNA polymerase, insert), IPR011261 (DNA-directed RNA polymerase, dimerisation)" /codon_start=1 /product="CRE-RPB-3 protein" /protein_id="EFP12449.1" /db_xref="InterPro:IPR011261" /db_xref="InterPro:IPR011262" /db_xref="InterPro:IPR011263" /db_xref="PFAM:PF01000" /db_xref="PFAM:PF01193" /db_xref="WormBase:CRE29538" /db_xref="WormBase:WBGene00060021" /translation="MPYANQPNIEVTELSNDLMKFVLWDTDLSVANSLRRVFMAEVPT IAIDWVQIETNTSVLHDEFIAHRMGLIPFLSDYHVEKMQYTRECECAEFCDECSIPFI LQMKCKDEATLAVTTADLRCMNNDTVIVCSKKVVTILACFQTVRPACGKALRERGTGR EDFHNREEILIVKLRKGQELNLKAYAKKGFGKEHAKWNPTCGVAFEYDPDNALRHTIY PNVEEWPRSDHSALPEDSTEKEAPFDQDGKPNKFFFSIEGTGALPVQRIVTMGIGILK KKLEELNMALSLELQAHAQQQ" gene <809405..>809799 /locus_tag="CRE_29539" /db_xref="WormBase:WBGene00086121" mRNA join(<809405..809547,809598..809649,809695..>809799) /locus_tag="CRE_29539" /product="hypothetical protein" /db_xref="WormBase:CRE29539" /db_xref="WormBase:WBGene00086121" CDS join(809405..809547,809598..809649,809695..809799) /locus_tag="CRE_29539" /note="contains similarity to Brugia malayi CRIPT protein, putative.; TR:A8Q386; coded for by the following C. remanei cDNAs: DR775708" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12497.1" /db_xref="WormBase:CRE29539" /db_xref="WormBase:WBGene00086121" /translation="MVCGDCEKKLTKIVGVDPYRNKKVNRNADGTGPKTMTTKNRLIG VQKKATIVGAKCKLCKMLIHQAGSHYCSTCAYQKGICAMCGKKIQNTKGLRQSIT" gene complement(<809989..>810767) /locus_tag="CRE_29747" /db_xref="WormBase:WBGene00060020" mRNA complement(join(<809989..810193,810427..>810767)) /locus_tag="CRE_29747" /product="hypothetical protein" /db_xref="WormBase:CRE29747" /db_xref="WormBase:WBGene00060020" CDS complement(join(809989..810193,810427..810767)) /locus_tag="CRE_29747" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12645.1" /db_xref="WormBase:CRE29747" /db_xref="WormBase:WBGene00060020" /translation="MEERRRFPEAFIAMTCVLLAIPLYLLIVGIIKLDSCSADSRIPI WMICTSAIMIIERMMESMNQAMDLKFVNNNPRPEITERRKLKEWENERYKNRSTMLFA MISLSRVAIFVTTIVGSAFVFSAYSNRSQCDGLLYWSAFVFCIVSLVIFLLGGVVIGG MFCIMLIVGKRNNKVVRSERR" gene complement(<811297..>811804) /locus_tag="CRE_29748" /db_xref="WormBase:WBGene00086100" mRNA complement(join(<811297..811480,811527..>811804)) /locus_tag="CRE_29748" /product="hypothetical protein" /db_xref="WormBase:CRE29748" /db_xref="WormBase:WBGene00086100" CDS complement(join(811297..811480,811527..811804)) /locus_tag="CRE_29748" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12336.1" /db_xref="WormBase:CRE29748" /db_xref="WormBase:WBGene00086100" /translation="MLPELCTKRDDCQADPRIPKWMIVVAVLMLIERFIGSVNTVKDR RFIRENPKPVFEEDGDNHVLIDWAQRRKHNKSSVFAVLGAFVRLVQFITFILGCVYVF GIYSISDQCNPLVFWTSYIYCLLSIIFYIIGACVLGCVCCCVALMNDSFAQ" gene complement(<812401..>813093) /locus_tag="CRE_29749" /db_xref="WormBase:WBGene00060019" mRNA complement(join(<812401..812581,812696..>813093)) /locus_tag="CRE_29749" /product="hypothetical protein" /db_xref="WormBase:CRE29749" /db_xref="WormBase:WBGene00060019" CDS complement(join(812401..812581,812696..813093)) /locus_tag="CRE_29749" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12478.1" /db_xref="WormBase:CRE29749" /db_xref="WormBase:WBGene00060019" /translation="MDWPQCVLVAFFVSFNQFETNIVKSPEIPAFYLSIMIVFLVVPV LFIVVGIIKFNDCQADSRIPIWMISIAAVILLERILETVKNIGDRKFIRENPKPEGED AVDEWEKQKKENQSTCLMVLLFFVRTAVFCGTIVGSVFVFSIFEKRDKCDGLVFWSSF VYCVLSISIYALVILLVACLCCLLALNITISS" gene <813546..>815583 /gene="Cre-klp-15" /locus_tag="CRE_29540" /db_xref="WormBase:WBGene00060018" mRNA join(<813546..813769,813826..814693,814735..815173, 815225..>815583) /gene="Cre-klp-15" /locus_tag="CRE_29540" /product="CRE-KLP-15 protein" /db_xref="WormBase:WBGene00060018" CDS join(813546..813769,813826..814693,814735..815173, 815225..815583) /gene="Cre-klp-15" /locus_tag="CRE_29540" /note="contains similarity to Pfam domain PF00225 Kinesin motor domain; contains similarity to Interpro domain IPR001752 (Kinesin, motor region)" /codon_start=1 /product="CRE-KLP-15 protein" /protein_id="EFP12488.1" /db_xref="InterPro:IPR001752" /db_xref="PFAM:PF00225" /db_xref="WormBase:CRE29540" /db_xref="WormBase:WBGene00060018" /translation="MASRLKAHVITREVAPGPDLLFSAKTCHSLICRKFSRKVIELVD NFLKEIFVFRHVRKATKRSASDSDCIAEKYSSHCLSRSAIPILTARRTTMRASAIPRP TEPLPNTLTTGRHSTLGHTGCPTLKKPIGSLPRVATAAKPLATTSRAGSTSSARSTTL RSSTVANKTIAAPTARTSNMARAVPVSSRPPSEVASLKSEITKLKEELKTREEQLKLT SEVLEMQKTNLTHSNAQLENAKIKLDLVESFKITLEEQLKVLKENMQQKTAHNEEMCQ QLNEKEAILRKLHNDVVDMRGQIRVAVRVRPMLKTEEESSNDGIEYPAVNAIAINQGT RKGTTLMFEKVFTPLFSQKDVFVNIEDFILSALHGYNVGLIAFGQTGSGKTHTMRGGD AEEEEGIIPRAATFLFRESKKLEATGWKFEFSLSFLEIYNNEAYDLLNNHAAVKLRLV NQTVTLDGLSDHPLAKQSEIGSLLRTADKNRKTAATKCNEYSSRSHAIYMWKIKAHQQ ATGISTSSMLKLVDLAGSERAKESGVIGQQFKEMTNINQSLSVLQKCISLQKSKSQHV PYRDSKLTQVLMDCLGAGNSKTMVVVNINPCNDQATESKRSIEFASKMRDTHIGSAVQ QRDLY" gene <815839..>817132 /locus_tag="CRE_29541" /db_xref="WormBase:WBGene00086110" mRNA join(<815839..815912,815958..816515,816561..816920, 816964..>817132) /locus_tag="CRE_29541" /product="hypothetical protein" /db_xref="WormBase:CRE29541" /db_xref="WormBase:WBGene00086110" CDS join(815839..815912,815958..816515,816561..816920, 816964..817132) /locus_tag="CRE_29541" /note="contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger); contains similarity to Interpro domain IPR001841 (Zinc finger, RING-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12394.1" /db_xref="InterPro:IPR001841" /db_xref="PFAM:PF00097" /db_xref="WormBase:CRE29541" /db_xref="WormBase:WBGene00086110" /translation="MTSVRKSTRRSSRFSLSAENMEEQLRELRRYEQAMLDRMIAQNI QIEDNQEIQSAPPQAPGIAPQHAAAIPMLLPDDESDSDDDVAVVIRAQQEARAVSPPR SRVVSARSSSDDGSIVDSGRRTYHDRPIAVTGPGVQSRSPAPNRIRSGYSITANFDQH PAAGPIRRSSRQAAARRNNATHAPVPREVVRTLFDHVSATRGVLHPSTLTRDADINVQ PIVHIVVPSDSSSDEDTFNSRLRVVPIGGVRVSTNPIQHRNVIPEVRVPRAGMYASND PNRPYRRLARSPVRFGTPFRVGTPVTTWGNCTMCFDSPIDPQGCNRCQQILGCKTCVI SWFESSESPSCPLCRRKWARKPDVARMTTIDKRKTAKAARRVPRRSRRSQVV" gene complement(<817804..>818811) /locus_tag="CRE_29750" /db_xref="WormBase:WBGene00060017" mRNA complement(<817804..>818811) /locus_tag="CRE_29750" /product="hypothetical protein" /db_xref="WormBase:CRE29750" /db_xref="WormBase:WBGene00060017" CDS complement(817804..818811) /locus_tag="CRE_29750" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12549.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29750" /db_xref="WormBase:WBGene00060017" /translation="MSSTPFSLMELPLLPLSILLKSMPLDSLIPLSETNQRFKQFIQL LHIKSGGYHVDIDERRFKISMLKQNFRCSFQEESKSFLLRNLSETLHKLRELFPGPID QLSICPSFSNYFYDINMECTVLSVGLDPYFMLEYQNAFTEEYLNALLNSVNFKKGLSL KGPILLRTEHEKIFDIDWLKIKCSELITTAILQKMKNKVIFLADISFSDKEINEFLHD LKNGNGNNQLQVLTFEKEGGFNEMEIIRGLNAVEMKEERVYKISEFDPSIQNDRFLPF NSGGEISIFDSFDFIRNDGIRCTIEFDYEVIQLFVWNQEKNKKRPRNDDFKIPAVKRF C" gene <821063..>822070 /locus_tag="CRE_29542" /db_xref="WormBase:WBGene00060016" mRNA <821063..>822070 /locus_tag="CRE_29542" /product="hypothetical protein" /db_xref="WormBase:CRE29542" /db_xref="WormBase:WBGene00060016" CDS 821063..822070 /locus_tag="CRE_29542" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12581.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29542" /db_xref="WormBase:WBGene00060016" /translation="MSSTPFSLMELPLLPLSILLKSMPLDSLIPLSETNQRFKQFIQL LHIKSGGYHVDIDERRFKISMLKQNFRCSFQEESKSFLLRNLSETLHKLRELFPGPID QLSICPSFSNYFYDINMECTVLSVGLDPYFMLEYQNAFTEEYLNALLNSVNFKKGLSL KGPILLRTEHEKIFDIDWLKIKCSEWITTAILQKMKNKVIFLADISFSDKEINEFLHD LKNGNGNNQLQVLTFEKEGGFNEMEIIRGLNAVEMKEERVYKISEFDPSIQNDRFLPF NSGGEISIFDSFDFIRNDGIRCTIEFDYEVIQLFVWNQEKNKKRPRNDDFEIPAVKRF C" gene <822535..>824416 /gene="Cre-kin-24" /locus_tag="CRE_29543" /db_xref="WormBase:WBGene00060015" mRNA join(<822535..822662,822786..823326,823371..823505, 823550..823725,823776..824136,824186..>824416) /gene="Cre-kin-24" /locus_tag="CRE_29543" /product="CRE-KIN-24 protein" /db_xref="WormBase:WBGene00060015" CDS join(822535..822662,822786..823326,823371..823505, 823550..823725,823776..824136,824186..824416) /gene="Cre-kin-24" /locus_tag="CRE_29543" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00017 (SH2 domain); contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="CRE-KIN-24 protein" /protein_id="EFP12557.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE29543" /db_xref="WormBase:WBGene00060015" /translation="MREGCEKSQDKQEKTVTGDTKEVKGKLRYARYYHGVQKKTEAEK LMKDSCPGTFLVRSSLLKEGFNVTLFLSVKVLNGEDGSCFHHYIIEFREKQYYLMQHY CDNKGNGKTEESKPFPEIADLIAHYQHHRLACKIRLGRPFKYPRWQLKNFQVNTTGKL GAGNFCTVYKGFVTHRRDLKGVDVAVKVSNEQKRDATLSMETRNLLFAEAKIMINYKH PNVISFYGIAADLPPYMVCMEFCSGGSLEDALKKYGKDMEEFERQILLIDAARGMRYL HFQKCIHRDLASRNCLISSEGLVKIADFGLSKTLEKNQTAFKEALKEAPLAWLAPECI QRESEFSIKTDVWAFGVVIFEVYNNGGKLFDGEDDTVIIKRIRKANMPTIEEKTKLPS MQQVLSSIWTRKPDDRPDFQKVLEQLVSALLPIKQEDLKRMQINNLKGVCRTQMPNTS LDKDIMITNEDQEQDVSSEKNKNKSRTGETKRKTGNRKDRNSGKRTPREETPKSKKPV PVRNTIRKGPGVTTE" gene complement(<824583..>826364) /gene="Cre-prp-4" /locus_tag="CRE_29751" /db_xref="WormBase:WBGene00060014" mRNA complement(join(<824583..824898,824948..825178, 825226..825675,825723..825838,825884..826021, 826076..826228,826278..>826364)) /gene="Cre-prp-4" /locus_tag="CRE_29751" /product="CRE-PRP-4 protein" /db_xref="WormBase:WBGene00060014" CDS complement(join(824583..824898,824948..825178, 825226..825675,825723..825838,825884..826021, 826076..826228,826278..826364)) /gene="Cre-prp-4" /locus_tag="CRE_29751" /note="contains similarity to Pfam domains PF00400 (WD domain, G-beta repeat) (7), PF08799 (pre-mRNA processing factor 4 (PRP4) like); contains similarity to Interpro domains IPR014906 (Pre-mRNA processing factor 4 (PRP4) like), IPR003648 (Splicing factor motif), IPR001680 (WD40 repeat), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DR781008, DR781837" /codon_start=1 /product="CRE-PRP-4 protein" /protein_id="EFP12342.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR003648" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR014906" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="PFAM:PF08799" /db_xref="WormBase:CRE29751" /db_xref="WormBase:WBGene00060014" /translation="MGEDEKFAVPAPPKQFGSLANAESVNAILNAAQKSQGSTVSLER MEVSNQADSRHDAEMLAEFDRRRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDR RERLRALLSTMSEDEIAAVLHTDEHNADKNDEETVTWYHRGPVELRKARVAIADFSLR KAKLRLEKAREDAAQPSHEKALARQEAHKWVQQINLHASQVADTRPVAYCEFSADSKH IVTAGWSGSVAVWKRDQCEKEIKFTGHSAQAGCARFHPGAFVQNDNASLNLVSCSYDG TVLLWSLAQETPIGELEKHPQRVSKVAFHPNGLHLATACFDSTWRMYDLTTRKELLFQ EGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNG YEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRASSAGQYLVSASFDCTLKMWS TTGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQSDY" gene <826895..>827594 /gene="Cre-dhfr-1" /locus_tag="CRE_29544" /db_xref="WormBase:WBGene00060013" mRNA join(<826895..827029,827071..827201,827251..827403, 827453..>827594) /gene="Cre-dhfr-1" /locus_tag="CRE_29544" /product="CRE-DHFR-1 protein" /db_xref="WormBase:WBGene00060013" CDS join(826895..827029,827071..827201,827251..827403, 827453..827594) /gene="Cre-dhfr-1" /locus_tag="CRE_29544" /note="contains similarity to Pfam domain PF00186 Dihydrofolate reductase; contains similarity to Interpro domain IPR001796 (Dihydrofolate reductase region)" /codon_start=1 /product="CRE-DHFR-1 protein" /protein_id="EFP12718.1" /db_xref="InterPro:IPR001796" /db_xref="PFAM:PF00186" /db_xref="WormBase:CRE29544" /db_xref="WormBase:WBGene00060013" /translation="MRRMNLIVAMDSEGGIGKNGTLPWRIKKDMQYFASVTKQVTDPS KRNAVLMGRKCWESIPESRRPLAGRLNIVLSRQLPEQKTDNLIFVNSLEAALKLLAEP PFVETIETIWNIGGAEIYDLALREKLVDEIYLTRVFKNFEADVHLKSLDINKMEKIIS GEVSSENSEIFEENGLQFEFGKWKIA" gene <827842..>832528 /gene="Cre-gls-1" /locus_tag="CRE_29545" /db_xref="WormBase:WBGene00060012" mRNA join(<827842..827856,827909..828068,828888..829036, 829161..829267,829323..829443,829514..829831, 829883..830190,830237..830427,830475..830701, 830751..830859,830907..831143,831191..831303, 831354..831543,831593..831759,831817..832078, 832130..832342,832398..>832528) /gene="Cre-gls-1" /locus_tag="CRE_29545" /product="CRE-GLS-1 protein" /db_xref="WormBase:WBGene00060012" CDS join(827842..827856,827909..828068,828888..829036, 829161..829267,829323..829443,829514..829831, 829883..830190,830237..830427,830475..830701, 830751..830859,830907..831143,831191..831303, 831354..831543,831593..831759,831817..832078, 832130..832342,832398..832528) /gene="Cre-gls-1" /locus_tag="CRE_29545" /note="contains similarity to Anopheles gambiae str PEST AGAP004367-PA (Fragment).; TR:Q7PQ78" /codon_start=1 /product="CRE-GLS-1 protein" /protein_id="EFP12403.1" /db_xref="WormBase:CRE29545" /db_xref="WormBase:WBGene00060012" /translation="MANKKNNQNKKNTDGPTMNGNNTTVTASLIHNASQNPQHSTSPS PNAMHQNNNSAAVTNGTTTPTPSSTTTTTGSQHHQSQNQHSHQKPLTTSTSSQQANNS KQPVKKINSNVGSQSSHGGVGARGGGGVVKQDPKPKEKEKEKSFQASGRQSNQANHHH HHVHHNTGGGGCGNQQNHRKKENKNRDQSNQSHRGGGSFGNSHSHQHQSSHSAEIAKS TGFPSNSSLSSSGQTTNSAVQTIPPPSVTLEDKKVQTDEIVEKKVKVVIKEEPPHFKS TNPKDMDTVMAFKEHDDWNKVELLLELLSFLSPTDLRLLGNCIEGSVRCYTNQMRPVE NTSNSPDPTACLPAFLCSLTPQQPSSFPDATSESSLVNQRSMVNNLFAHQHPPGLPPL IPAMIYPVETNYQQSTSSMAPSSTLPANTKDICNGTTPTSSTTSASNTPSEQQQHDSL QNVAKNINGSITTSNPPSSKPLSEAEALSPTSARTSSATTPQPEPPVPQEPEKFLRSV RDLTSYLYMLMAVCASTNRKSAAKISDYVKNVVIREKGQILERIPDELDKIDVLQDIG KIVAAMTHHPAVSVDDKMKYADMRDGLRAEIECLFRLYYSPEKELERKRAEVTSTQGV GDVADEGESDEEDVEEYEIERRYEYTNSRFGNNSQSSSGAFFITRFIGRQVEKSDNLF SLEIHWSDGDRTFAQRTSNQLKALQHRLLDEFGQQRSEKSHHGMASSISSFDEDHKKL STSTSTMETSFAPPGDRIVPRLARDATPVQYIQYINELSDLPARMMLSTVICEEFNGT RLRTEDLLQETNETSDGLIFSRWKNPRAKSPVRYFQRNAAGKIEAIELPINLQPFIYS NIPQTQMQTLFPSCSNCGGPHMVKDCNKPTLLDKKVEHKMRLDPEGPVTMPPQIPGVT TPAVAYPPMHAQMPHPMYLDNNQLLGVGHFAHHQQQQQQMMQNAMFHNGQFRTNGQFE NPGQLIFYQQVVPNSNNTNSNNGNGGASQNSNF" gene complement(<834132..>837156) /locus_tag="CRE_29752" /db_xref="WormBase:WBGene00060010" mRNA complement(join(<834132..834729,835060..835886, 836281..836543,836590..836727,836775..>837156)) /locus_tag="CRE_29752" /product="hypothetical protein" /db_xref="WormBase:CRE29752" /db_xref="WormBase:WBGene00060010" CDS complement(join(834132..834729,835060..835886, 836281..836543,836590..836727,836775..837156)) /locus_tag="CRE_29752" /note="contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000568 (ATPase, F0 complex, subunit A)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12655.1" /db_xref="InterPro:IPR000568" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="PFAM:PF00097" /db_xref="WormBase:CRE29752" /db_xref="WormBase:WBGene00060010" /translation="MSESAEVITDADARSDVGVKAVSEAVVEHPSVDSLALVPREEVK SVLDLIRDKADNTHGCHVCYDDYETPKNQPRVLACGHTYCTRCVISCSAPSEQHNSSI GIKCPECRKISIQAPATVPVNFQLMQLLTALSLIKESDPDECDPPEYENFERLGAHVP VNELMSLSLSDLCEHMKAVFNAIRLLSLNDKKIKRMSVFRKFQTESQKIDDIERNMYK IIQNMTKLQNGQTMEDENSTNLSWNNLHPIRNERRFNDADWMREMVVFRPNNPNAPVI PLPTFPVAQPPSDDLRTVSERDQDERGQSRNMAVFREAHLRRERESAQEREVATRNEA IMRRLFDDHYVSNDSEIDQFTWFRSLYRNNGPANGGQIGMVRALNETRRRRQAEEAAN AAALEENNDEDEEEDDEDEEDEEDEEDEEEEEDGADEEEEEQDEEEEEQDQEEEEPRD PQEVRVVDISDVPDFDFQMREELRELARQQAPEVEFPEEEEEVDDAASDDSSFIDVPI PRPPPPEVTIGEALTAYRLIEAFRPSSHRHLIESYNFSVFTPNFDALHQQILQPNASV TDVLANEHLLDLRRVCFMGGVCMNSLLRSIRQHSAQAPPAPQTPPLTERVRRQRPAAA DDYNARLTVLRKRAKEALRGNRPDQPTTDEEANLTVRLIVNLANSMGVRDKLEEMLSP QPRVDQNEGLFVMRTNASTRQEMLFCTVCRCDVPMGSKQVHSQGRRHITNLAK" gene <841076..>843948 /gene="Cre-imp-1" /locus_tag="CRE_29546" /db_xref="WormBase:WBGene00060009" mRNA join(<841076..841132,841182..841401,841502..841761, 841808..841897,841944..842098,842215..842573, 842621..842979,843030..843144,843193..843482, 843835..>843948) /gene="Cre-imp-1" /locus_tag="CRE_29546" /product="CRE-IMP-1 protein" /db_xref="WormBase:WBGene00060009" CDS join(841076..841132,841182..841401,841502..841761, 841808..841897,841944..842098,842215..842573, 842621..842979,843030..843144,843193..843482, 843835..843948) /gene="Cre-imp-1" /locus_tag="CRE_29546" /note="contains similarity to Pfam domain PF04258 Signal peptide peptidase; contains similarity to Interpro domains IPR006639 (Peptidase A22, presenilin signal peptide), IPR007369 (Peptidase A22B, signal peptide peptidase)" /codon_start=1 /product="CRE-IMP-1 protein" /protein_id="EFP12523.1" /db_xref="InterPro:IPR006639" /db_xref="InterPro:IPR007369" /db_xref="PFAM:PF04258" /db_xref="WormBase:CRE29546" /db_xref="WormBase:WBGene00060009" /translation="MTIPIHYKLLTLLLVCISVISTTPSTTQSIEYSSNRGPFRSSFV FMTVENKRTGARSKSCVNYQQYLKSDTSSSLIGYDFESAHPFLFKFWEGLFNRTTICP LPTPRRGDIMYNDEVVPLDYRIDDDGTPCTRTFTNGVTSFRNASQFTVDQLKRHQASA ALLILDHGREFVKGWRDYLFSDFYDPYINNSAAIPTFYIYRSDLNNKIMSLLKENDIS DDQIEVRFHRPAGPLFDPSFVVIWIISMICVAGGGFWAFNRHRAGKDVSLASQRMDDD VSTTNESGTKGFFEKYAGMITIVLMMITLCGVLLLGYFFRPVLGSSRNSIKLLQQIIP VVFFNIFLVIFGTCSLHGCIRGLLSNFSFSEHRWYKAKVTWFPACCARANKYQYSELF ICLLCFSFCATWFIIRRQPYAFILLDIINMALCMHVLKCLRLPSLKWISILMMCMFVY DAAMVFGTPYITPNGCSVMLEVATGLSCASREKTKGYPIPPVEQESVPEKFPMLMQVA HFNPMNECMDMDIELGFQFTILGLGDIVMPGYLVAHCFTMNGFSERVRLIYGVVSVAG YGIGLIVTFLALALMKTAQPALIYLVPSTLIPIMLLAFFRREFSKIWNGVPADSTPLV SDRADIEGKKWINSDSPNETMEESPESIQIKMSSTSSSSTQENQPTNV" gene complement(<844531..>850868) /locus_tag="CRE_29753" /db_xref="WormBase:WBGene00060008" mRNA complement(join(<844531..844783,844833..845383, 845426..845671,845717..845938,845984..846205, 846222..848835,848881..849431,849493..849573, 850258..850323,850370..850546,850593..>850868)) /locus_tag="CRE_29753" /product="hypothetical protein" /db_xref="WormBase:CRE29753" /db_xref="WormBase:WBGene00060008" CDS complement(join(844531..844783,844833..845383, 845426..845671,845717..845938,845984..846205, 846222..848835,848881..849431,849493..849573, 850258..850323,850370..850546,850593..850868)) /locus_tag="CRE_29753" /note="contains similarity to Caenorhabditis remanei Holocentric chromosome binding protein protein 1 (Fragment).; TR:Q45U86; coded for by the following C. remanei cDNAs: DR408338" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12617.1" /db_xref="WormBase:CRE29753" /db_xref="WormBase:WBGene00060008" /translation="MASLINILGLMFSVYFYTWLHPDLNANVRIGLHRFKVDWIIYIG SIFCLFLGVCVIAPKYTRRTNALAGNIGMAVCSVLVVLNHYLLEIKWAWSGLLYMTNI VFYILFMGMAMMGQTGTYYYDRNRIISISIPVVSNIFVTGMLISVIQDTGFADTVPCI SFGIHTCMAILAQVNRFIHSRNQIMDTSESFNDENKPQGKKRQQIESPFSAATPKSRI GKEPKRLFGNAFHNLADSNLEETRIETDSRPNSAASEDITLDATDASTIYRGSEVDPN LEETELYSAGTSANSTKDLSMVDESDETNADITLASNFQEKVFLHETLTTPTAPRVPS PIVMGDDSTPTAPTALHLGSEMGLETIDTHSVESIQSPLGNAKPHIDYSLYEFEILEQ KVEHEVTVKELQEKIENLKEMHRKEMQEINQSRIFEEQLLMQQMDAANKKAKSDREAA KEREKSLQQIADELKTKLEEPDEEKQQLEKQLAELSSRIEELTQKAVNVDAMQQNSAE HQDRVHEFENFKLENSAQLTNARQEIEELQRKTTEMEKKVQEANEEVERVRQELCSST KLDDLKAEHEVVRTMLMNEITLLESQLSENSQSNLLTQEIETLQKKIQELEAEAIQAV ENKDILHADFSAKQEAAAIEAQEKIVELNEAKEKVAELMEEVINDLIILDLNIIFQIA KLREEAANNARVTELEQELEENRKLMISEMASLEQQLESARDNSGVNKELEGKYETAE ARIQELESALEVNKQNFDGIQIELEQKASMVIELTDSMNALQQVLAENSQKVSELESS KAKVDELNIALEAAHMQLDEVKLSSEETSTLKEQLVASEARVHELVASLDSLTEQMDA LRQKNENSDKEILCLQTEIEAARQEFDIEEEGSCAKIRHLELTVQEHEAARKSLEEVV EECKKDLQEAKNKLEETQKESVLREETSSEYQDKLKQAEEENQGLWANIKALEEEKEN AAQKEQSSQVKIQELEASLDALRQSSNISEALRSEVDGSVAMIEDLQAQLEIAHQTSA SVNDLEKQLETSTVTIQELRSSEESLRVQLEAATKLIDEFRGEKETVEAQHVAARESL SSELNIISQKKEELDHDKLTLETRIQELESSLASLKQDLSNQKDEKDRINAELESTRH KVERREAAIHELREQHECKVSELNVKINESQQKATDTLDLQSKIVELTGELENVRAEL TGAEIINQETIQELRAEVESSHIMISQQKEQLAKMEKQEADVSEKSIMSLKFIAQVKL NQEQLEQLQSTIQEFEASFNLFKGAEENTKQTIQQLTSEVENSQKTISEQKEQLDEAV ARVEKYETELSIQSAQHQEQLEKLQSTIQEIEASNSLTRGAEESNQQMIEKLKEEVES YQKTILDQKVQIEESVARIEKQEAELTNQAEQYQDQISHLQSTIQAFDDSKHSAELKS QELMSRIDELEASVIVAQKAAEEMKTEKDNLLEQAREQLEQMKQNVESEKSVLQQDLQ QSNEKLEAAEQALSSKENTVVTLESRIETMSRQFEERLNEANEWKAQAMNIGTMTASL TQMQQQMKEMAEKLEESKRRVEEVEENAHHDITIMQDEKNEQSAALEEAKSQIAALDA KLKKAEKEIERLEKVCDEFDDEESGYKEQISKLEAEIKQLKGVKSPPKVLGLIQQARL NVKPLSRESSHMEPPISEDGFEDAQDSFQPNSTQAHQKSFNQTARQDKTMNVASATML HPDDHAHEKSAIETPSKKNRSNCQQQ" gene complement(<851201..>851686) /gene="Cre-tin-13" /locus_tag="CRE_29754" /db_xref="WormBase:WBGene00060007" mRNA complement(join(<851201..851410,851570..>851686)) /gene="Cre-tin-13" /locus_tag="CRE_29754" /product="CRE-TIN-13 protein" /db_xref="WormBase:WBGene00060007" CDS complement(join(851201..851410,851570..851686)) /gene="Cre-tin-13" /locus_tag="CRE_29754" /note="contains similarity to Pfam domain PF02953 Tim10/DDP family zinc finger; contains similarity to Interpro domain IPR004217 (Zinc finger, Tim10/DDP-type)" /codon_start=1 /product="CRE-TIN-13 protein" /protein_id="EFP12461.1" /db_xref="InterPro:IPR004217" /db_xref="PFAM:PF02953" /db_xref="WormBase:CRE29754" /db_xref="WormBase:WBGene00060007" /translation="MDQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEK CTNKCITAPGSSLASGEKQCLQRCMDRFMESWNLVSQTLQKRLQEEMASSGGMGGGFG QGPSFS" gene <854089..>856329 /gene="Cre-lmn-1" /locus_tag="CRE_29547" /db_xref="WormBase:WBGene00060006" mRNA join(<854089..854294,854400..854484,854534..854647, 854806..855039,855092..856135,856201..>856329) /gene="Cre-lmn-1" /locus_tag="CRE_29547" /product="CRE-LMN-1 protein" /db_xref="WormBase:WBGene00060006" CDS join(854089..854294,854400..854484,854534..854647, 854806..855039,855092..856135,856201..856329) /gene="Cre-lmn-1" /locus_tag="CRE_29547" /note="contains similarity to Pfam domains PF00932 (Intermediate filament tail domain), PF00038 (Intermediate filament protein); contains similarity to Interpro domains IPR001664 (Intermediate filament protein), IPR016044 (Filament), IPR001322 (Intermediate filament, C-terminal); coded for by the following C. remanei cDNAs: DY526830, DR775906, DT936718, DR777899, DY529303, DY526049, DR777416, DR776753, DY525667, DY525852, DT936937, DR781234" /codon_start=1 /product="CRE-LMN-1 protein" /protein_id="EFP12660.1" /db_xref="InterPro:IPR001322" /db_xref="InterPro:IPR001664" /db_xref="InterPro:IPR016044" /db_xref="PFAM:PF00038" /db_xref="PFAM:PF00932" /db_xref="WormBase:CRE29547" /db_xref="WormBase:WBGene00060006" /translation="MLTHLSMAPMTFSSDLRFLADTFSTAFFFREKTITMSTTRKSTR SSRIVSLERSANSSLSNGGAGDDSFGSTTLETSRLQEKDHLTSLNSRLAQYIDKVRQL EQENNRLQVQIRDIEVVEKTEKSNLADRFEAEKARLRRALDLAQDELAKYKIEYDAAK VEVKKLKPQVEKLERELAGAEEQALHAQSIADQSQAKQKTLQARNDKLVVENDDLKKQ NITLRDTVEGLKRAVEDETLLRTAANNKIKALEEDLAFALQQHKGEMEEIRHKRQVDM TTYAKQINDEYQSKLQDQIAEMRAQFQNNLAQNKAAFEDAYKNKLNDARERQEAAVSE ALHLRARVRDLETSSSGNASLIERLRSELETLKRSFQEKLDDKDARISELNQEIERMM SEFHDLLDVKIQLDSELKTYQALLEGEEERLNLTQDNSKNASVHHVSFSTGGGASAQR GVKRRRVVEVNGEDQDIDYLNRRSKLNKETIGPVGIDEVDEEGKWVRVANNSDEEQSI GGFKLVVKAGNKEASFQFSSRMKLQAHASATVWSAESGAVHSPPDTYVMKKQQWPIGE NPSARLEDSEGDTVSSITVELSESSDPSDPADRCSIM" gene complement(<857961..>858627) /gene="Cre-hlh-16" /locus_tag="CRE_29755" /db_xref="WormBase:WBGene00060005" mRNA complement(join(<857961..858068,858241..858465, 858517..>858627)) /gene="Cre-hlh-16" /locus_tag="CRE_29755" /product="CRE-HLH-16 protein" /db_xref="WormBase:WBGene00060005" CDS complement(join(857961..858068,858241..858465, 858517..858627)) /gene="Cre-hlh-16" /locus_tag="CRE_29755" /note="contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain; contains similarity to Interpro domains IPR001092 (Basic helix-loop-helix dimerisation region bHLH), IPR011598 (Helix-loop-helix DNA-binding)" /codon_start=1 /product="CRE-HLH-16 protein" /protein_id="EFP12353.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR011598" /db_xref="PFAM:PF00010" /db_xref="WormBase:CRE29755" /db_xref="WormBase:WBGene00060005" /translation="MSSSASPPGESEEFEPYVRRKRAEGGSRKKMQGLNEQEQNLLRN SINSRERRRMHELNDEFESLRECLPYPNEANSRRMSKANTLLLASNWIKQLVNANHKL QIELNAANAKVESLMARIQKLEKPVSKCLKCKQNVCFSVDCITSS" gene <859033..>861188 /gene="Cre-trt-1" /locus_tag="CRE_29548" /db_xref="WormBase:WBGene00060004" mRNA join(<859033..859182,859231..859415,859470..859642, 859695..859951,860002..860194,860239..860395, 860444..860600,860648..860905,860952..861017, 861063..>861188) /gene="Cre-trt-1" /locus_tag="CRE_29548" /product="CRE-TRT-1 protein" /db_xref="WormBase:WBGene00060004" CDS join(859033..859182,859231..859415,859470..859642, 859695..859951,860002..860194,860239..860395, 860444..860600,860648..860905,860952..861017, 861063..861188) /gene="Cre-trt-1" /locus_tag="CRE_29548" /note="contains similarity to Interpro domains IPR003545 (Telomere reverse transcriptase), IPR000477 (RNA-directed DNA polymerase (reverse transcriptase))" /codon_start=1 /product="CRE-TRT-1 protein" /protein_id="EFP12366.1" /db_xref="InterPro:IPR000477" /db_xref="InterPro:IPR003545" /db_xref="WormBase:CRE29548" /db_xref="WormBase:WBGene00060004" /translation="MSPEYRLLFKFQKKYVISLAKLHKNLGENHWSTILRENANLAIL RNIFKRKMKGKLNYRHMSAFLVSSENVLKVRNTVVMDEVDKLSKSIVSTRHNFELRKL APKRKLKSLKDCYMFEHETMNIIRRVFTIFRLRQHIGSTNCDSMLVWIMNIMKQEKLQ YVPDFVFKEAPLARAFRAKQVLKDVDPLSKRYSQFSIINHLRGALIWWIFAALRQIMI PIDVKRKKVYLWRGGYLKLLRREMKDFKERYKVKRVIRKPAFVLNPSPNSVVGRLKFD IVENKFRPIIRRNPIDKVKDKMHWKKVNSMLTWCLEKGGETRQSINSSCKILLKFLRR NDTFPKLFGYTADVSKCFSAVKHSTLTSIIERLLLENLCDIWTACGKGRDKKGFHKLI FCSNDSEEGAYQSLKKKMESKHVEDHTVIYCNQTSRKWLLDQLRSTISSYCYKRGKTT FKITKGVPQGHPLSPNFAFMYLNDFEKENWRKVEHDARIIYCRYVDDYVFMMTDKDLF KNISQPLFTGKNQHGVKANYEKCKESDDKLIWCGVKMDLKNAKFYRRKRCLDGTIRDH LINFDKN" gene complement(<861458..>865660) /gene="Cre-pqn-26" /locus_tag="CRE_29756" /db_xref="WormBase:WBGene00060003" mRNA complement(join(<861458..861567,861625..861913, 861959..862912,862931..863107,863574..864007, 864624..864710,865594..>865660)) /gene="Cre-pqn-26" /locus_tag="CRE_29756" /product="CRE-PQN-26 protein" /db_xref="WormBase:WBGene00060003" CDS complement(join(861458..861567,861625..861913, 861959..862912,862931..863107,863574..864007, 864624..864710,865594..865660)) /gene="Cre-pqn-26" /locus_tag="CRE_29756" /note="contains similarity to Dictyostelium discoideum Similar to Dictyostelium discoideum (Slime mold). Adenylyl cyclase.; TR:Q869L1" /codon_start=1 /product="CRE-PQN-26 protein" /protein_id="EFP12462.1" /db_xref="WormBase:CRE29756" /db_xref="WormBase:WBGene00060003" /translation="MAPRQRRLLLVTSILLHVASTSANIYGAAAVQQQQQYQQQQQQQ PQYSQGYGEVPSTFQTSFTFTQPETQSYQPAQQATPQQSSSSNLQFHSYNSQPGVQYG SQDSFFPNQAALTAAATSFATSAAQQYAQTYAQQQQVQAPAQIDQANLAKYSQYLDIL QKAYGIQLPGELTMQPNTAAVATNTAAGYQTQQPQQVVNQVPQTYGQQPQQPQPAAQS YSGYPQTVAQPQPQVNAQTQAEITYQQQLAAYNHQQQLKIETRSFQQLAQQQQQQQQQ QQQQLQQQQQLQQQQLAAQQQQQQLQQQQEAERIAAQQRQAQEQARQQQLAQQQAQQL QQQIQQQQQQQQQQQQQQTQYGGMQPNPYVQPPVQQPAPVQQPAPQQPMNFLPAPQAP MPQAPPPQQPQQPASQQYITQPPTYKNNYQTAALGQVNTYNGQSKPQVYTYPGPSQVQ KPNHSTSYGNHENSVIEEEPHGSVISQQQIVPPRPVQPAQPISVATVTRGPPPPTHPV PVVQPSSVVPKSQPRPPPTTRPPTRATIRPTPQTTQTKSATARPSPASATSSAVTPSP SQSLTQQIRKLPAVLYIDSKNESTKKTETLLRETYGLPLVTFYVDKVIMKRKEEKLVQ KDIETTSINKKFLQTDKPAAIERQLQQLTAHKGLPYLFICGTFIGSESHIDNYHTNGQ IPQLVEYVCGDEKKKKKTKKTST" gene complement(<869223..>872132) /gene="Cre-mfb-1" /locus_tag="CRE_29757" /db_xref="WormBase:WBGene00060002" mRNA complement(join(<869223..869588,869753..869920, 869971..870114,870479..870630,871419..871617, 871899..>872132)) /gene="Cre-mfb-1" /locus_tag="CRE_29757" /product="CRE-MFB-1 protein" /db_xref="WormBase:WBGene00060002" CDS complement(join(869223..869588,869753..869920, 869971..870114,870479..870630,871419..871617, 871899..872132)) /gene="Cre-mfb-1" /locus_tag="CRE_29757" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domains IPR001969 (Peptidase aspartic, active site), IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="CRE-MFB-1 protein" /protein_id="EFP12436.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR001969" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29757" /db_xref="WormBase:WBGene00060002" /translation="MFSLFSIFTSIPFHKLFPSTINSPTFSESIFSNFFKNMPFIGRD WRAPGETWVRTPHTNGWEQTKLRPVQVKTESYFVISSEPIFIPQVSSSPTLMSSSSPK FILDSGSSASSIPKFSLYDSEQNSSCGSLPRCNSSSSSAEDSDSANDKDWIPHCFVKS TSKEFIGCTSMSEAFHRLDLARAVNDVRRFNFICKVVQILVEEKLPNLSATARKSLLG ILTAICFRSSNEDVNVSTAKDLVKNFGNGLDNVNVCGSPQLVSRHHQTASSLLDLISE KNIRTAADADDEAALTFFDLPREVVLMVLRRLPDHQSILETAQVHEALQDLIDGEDKI WKSLCTFHFQEYQIIKQKTSGKSWRQAFFDLKKYHGCRELYADLIHICCHCKALFWKS LGHPCVRETTAPSVRVTPRQFVDMLIYL" gene <878594..>881973 /gene="Cre-sup-17" /locus_tag="CRE_29549" /db_xref="WormBase:WBGene00060001" mRNA join(<878594..878725,878778..878860,878909..879095, 879139..879269,879514..879889,879939..880007, 880052..881096,881144..881538,881584..>881973) /gene="Cre-sup-17" /locus_tag="CRE_29549" /product="CRE-SUP-17 protein" /db_xref="WormBase:WBGene00060001" CDS join(878594..878725,878778..878860,878909..879095, 879139..879269,879514..879889,879939..880007, 880052..881096,881144..881538,881584..881973) /gene="Cre-sup-17" /locus_tag="CRE_29549" /note="contains similarity to Pfam domain PF00200 Disintegrin; contains similarity to Interpro domains IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR001762 (Blood coagulation inhibitor, Disintegrin), IPR001590 (Peptidase M12B, ADAM/reprolysin)" /codon_start=1 /product="CRE-SUP-17 protein" /protein_id="EFP12682.1" /db_xref="InterPro:IPR001590" /db_xref="InterPro:IPR001762" /db_xref="InterPro:IPR006025" /db_xref="PFAM:PF00200" /db_xref="WormBase:CRE29549" /db_xref="WormBase:WBGene00060001" /translation="MRKLRLHFVVTLIFCLLYEDVYGLNNFIDNFETLNYRATHVANQ VSRRKRSIDTASSHYQEPIGFRFNAYNRTFHVQLHPIDDSLFHEDHVADVDGGFADIK PSHFLYEGYLRDDPNSHVHGSVFDGVFEGHIQTGEGRRFSIDKSAKYFERDDRPTQYH SIIYRDDEINHRKWRVKRDAENLAEQMQGCGLSSRVRREMSNIQNSGENSDFFTNYMT MSGRSKRATRDSEGLFSVRTCSLYMQADHKLYEHIRMKEGNNDPIRTREEIVSLFYNH IKAVNEIYEGTNFNGIKGLHFVIQRTSIYTPDSCDRGRAKTDSDNPFCEENVDVSNFL NLNSQRNHSAFCLAYALTFRDFVGGTLGLAWVASPQFSKILLLFRHQRKIIFPDTAGG ICQVHQRYNEGSRGWVYRSLNTGIVTLVNYGNRVPARVSQLTLAHEIGHNFGSPHDFP AECQPGLPDGNFIMFASATSGDKPNNGKFSPCSVKNISAVLAVVLKSMPVDPTRNANP VGIGKRNCFQERTSAFCGNQIFEPGEECDCGFSQADCDQMGDKCCVPHEARGLSGPGP CKRKPGAQCSPSQGYCCNPDNCSLHGKHEEKICRQESECSNLQTCDGRSAQCPVSPPK HDGIPCQDSTKVCSAGQCNGSVCAMFGLEDCFLTEGKPDELCFLACIKDGKCTSSVNL PEFASNRTNFLQNMRKGKPGLILHPGSPCNNYKGYCDIFRKCRSVDANGPLARLKNLL FDKRTIETLTQWAQDNWWAVGVGGLIFLVMMALFVKCCAVHTPSTNPNKPPALNIYQT LTRPGTLIRQHRQRHRAAAGSAPTAPAGQSRSAGAPTSRTTPSARPSAPPLVAPQVPV AVPPPPGVAGPPIPLIAAMPPGASSSSPAVIVLEPPPPYTAADPGSAMGGPRRGHRKN KRQAASDAAPSSGNGGKKKGK" gene <883477..>886186 /locus_tag="CRE_29550" /db_xref="WormBase:WBGene00060000" mRNA join(<883477..883539,883739..884116,884169..884321, 884369..884519,884569..884675,885873..886079, 886127..>886186) /locus_tag="CRE_29550" /product="hypothetical protein" /db_xref="WormBase:CRE29550" /db_xref="WormBase:WBGene00060000" CDS join(883477..883539,883739..884116,884169..884321, 884369..884519,884569..884675,885873..886079, 886127..886186) /locus_tag="CRE_29550" /note="contains similarity to Pfam domain PF02615 Malate/L-lactate dehydrogenase; contains similarity to Interpro domain IPR003767 (Malate/L-lactate dehydrogenase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12600.1" /db_xref="InterPro:IPR003767" /db_xref="PFAM:PF02615" /db_xref="WormBase:CRE29550" /db_xref="WormBase:WBGene00060000" /translation="MTIKDKREFNETDEIVISKEKLDSFVLECLSKAGCIGDHAQQLA ETLLCSDYRGHYSHGINRLHIYVHDLMMKSTAVTGTPQIIKTKGSTAWVDGNNLLGPV VGNFCMQLAVEKAKEFGIGWVVCRNSNHFGIAGWYAEYACRQGLVGMAFTNTSPCVFP TGSREKSLGSNPICMAAPGMDGDSFFLDMASTTVAYGKIEVADRKGETWIPGSWGADK NGDETHQPKEVLDGGGLQPLGGSEITGGYKGTGLCMMVEVLCGIMGGSAFGKNIRQWQ TTSKTADLGQCFVAIDPECFAPGFPIRLQEFCDETRNLTPTNPARPPQVPGDPERAHM NMCDDLGGIVYKKKQLDHLKNLADRLGVIMRLVDEKAQ" gene complement(<886354..>888308) /locus_tag="CRE_29758" /db_xref="WormBase:WBGene00086136" mRNA complement(join(<886354..886412,886459..886634, 886682..886861,886906..887183,887229..887451, 887503..887777,887824..887971,888015..888187, 888231..>888308)) /locus_tag="CRE_29758" /product="hypothetical protein" /db_xref="WormBase:CRE29758" /db_xref="WormBase:WBGene00086136" CDS complement(join(886354..886412,886459..886634, 886682..886861,886906..887183,887229..887451, 887503..887777,887824..887971,888015..888187, 888231..888308)) /locus_tag="CRE_29758" /note="contains similarity to Pfam domain PF01207 Dihydrouridine synthase (Dus); contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR001269 (Dihydrouridine synthase, DuS); coded for by the following C. remanei cDNAs: DR409015, DY528945" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12586.1" /db_xref="InterPro:IPR001269" /db_xref="InterPro:IPR013785" /db_xref="PFAM:PF01207" /db_xref="WormBase:CRE29758" /db_xref="WormBase:WBGene00086136" /translation="MNGETAPEGYEVEKCGECEAVDEEQTTSLDVDDPLNVFRMPKKM TLAEKVKNTDEVIAKNLRFWRETFEKQKITKVLAPMVDQSELAFRLFTRKYGAQLTFT PMIHAHLFVNDGTYRRNSLALVKADRPLVVQFCANKVETFLAACRLVEDVCDGVDLNL GCPQMVAKRGRYGSWLQDEVDLICEMVSAVRDYCKLPVSCKIRVRDDRQQTVEYAKRL VDAGATMLTVHGRTRDMKGAETGLADWSRIRDVVEAVGSRVPVMANGNIQFPGDVERC MEATGAVAVMSAEGLLYNPLIFDDSNSHIDTWKIAAEYLQYAKKFHAGTSAIRAHVFR ICHHSLLEYEDFRMRVSLEHRVEDFENIVEELGKRATADAEAGKEREEEARKLFELIR NGELMDAIEVSKQPHWISKPYFRLKEVAKESIVGEGEKTFREKQKEKLAQTAKEMGVS MKQARKRERRQLAGARITEAKRTKFPPCARCKQPAGQGCTMSKCKKCCRYQCKNEKLD CKSHRYLFASQPSENIQEIST" gene complement(<888753..>891353) /gene="Cre-cids-2" /locus_tag="CRE_29759" /db_xref="WormBase:WBGene00059999" mRNA complement(join(<888753..888822,888874..889045, 889092..889235,889279..889509,889558..889623, 889677..889812,889861..890153,890208..890433, 890486..890632,890677..890756,890810..890913, 890964..891096,891145..891259,891309..>891353)) /gene="Cre-cids-2" /locus_tag="CRE_29759" /product="CRE-CIDS-2 protein" /db_xref="WormBase:WBGene00059999" CDS complement(join(888753..888822,888874..889045, 889092..889235,889279..889509,889558..889623, 889677..889812,889861..890153,890208..890433, 890486..890632,890677..890756,890810..890913, 890964..891096,891145..891259,891309..891353)) /gene="Cre-cids-2" /locus_tag="CRE_29759" /note="contains similarity to Pfam domain PF04818 Protein of unknown function, DUF618; contains similarity to Interpro domains IPR006569 (Regulation of nuclear pre-mRNA protein), IPR006903 (Protein of unknown function DUF618); coded for by the following C. remanei cDNAs: DR409638" /codon_start=1 /product="CRE-CIDS-2 protein" /protein_id="EFP12313.1" /db_xref="InterPro:IPR006569" /db_xref="InterPro:IPR006903" /db_xref="PFAM:PF04818" /db_xref="WormBase:CRE29759" /db_xref="WormBase:WBGene00059999" /translation="MVVLTSDVVYNRLQDIKNPTQEAIETMSLWIMHYKDKASIDLIV DGWLNCFKTAGTDSKRIALFYVMNDVVQKAKMKHADTIIPAFQPAVLTAVGIGRKQEK VKGVMKRCIQIFKSRNVFSTASTTAMENLLDEGYDAEDQALEVDADDLYKKITNFVGA RNVIADMMKYVTEGDFDYKEKCRSGMKDREEGAHILQEVHEAIDTMVQVRHSMEDQKK RMMALSETLELAKRVFLHQKREVLVVEEAYVNFRDGIKAVHTDLVEMEKKGVYPGIFS PNDEDIYNSRGMSQGWGDNRNQVDMEIDEDERPQAPMMKPALQALVGISSQPSLQSRI MQLGLKKIADGDEDMFQQNAGNAEVAAAIPSTFQGRPPALGANQFSIPPPAIPPPSVV DPRIRKDSEGGPSQYALALQQHGLPPPTQHKPMPVATPAAVQPAIYQSQFESRDPRFA AMQQQQPPPPRPAQLAQAPTAYQAQFEQRDPRIMHQATTAPVQQNYQNSYEAQKPSII SPQPHAGSYQGRFEPPPISPQVMAQQPQYHQPTGGFNRPPPSQQPPQQQQQPHQSHGF SDYNNGGDRRDDRYDRRDDRGRGSYHDNSRYDDRRKSAPYGNPRGGGGGERWRNGGGG GGAYNDRNRHDNRDNWRGGNSRGGGYNRY" gene complement(<892041..>894548) /gene="Cre-twk-30" /locus_tag="CRE_29760" /db_xref="WormBase:WBGene00059998" mRNA complement(join(<892041..892147,892204..892292, 892349..892392,892442..892620,892675..892829, 892878..893031,893091..893224,893276..893504, 893555..893902,893932..894061,894107..894217, 894266..894364,894414..>894548)) /gene="Cre-twk-30" /locus_tag="CRE_29760" /product="CRE-TWK-30 protein" /db_xref="WormBase:WBGene00059998" CDS complement(join(892041..892147,892204..892292, 892349..892392,892442..892620,892675..892829, 892878..893031,893091..893224,893276..893504, 893555..893902,893932..894061,894107..894217, 894266..894364,894414..894548)) /gene="Cre-twk-30" /locus_tag="CRE_29760" /note="contains similarity to Pfam domains PF00041 (Fibronectin type III domain) (2), PF07885 (Ion channel) (2)contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR008957 (Fibronectin, type III-like fold), IPR003961 (Fibronectin, type III), IPR013099 (Ion transport 2)" /codon_start=1 /product="CRE-TWK-30 protein" /protein_id="EFP12340.1" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR013099" /db_xref="PFAM:PF00041" /db_xref="PFAM:PF07885" /db_xref="WormBase:CRE29760" /db_xref="WormBase:WBGene00059998" /translation="MSCFQVESDKMARFLSLHVLLIGSVVLYIILGAIVFQMLEGEHL DTLKKEHMDRIDQNAKDYVDRLWDLTKKEKDTFDNVDDLIKSVKAKTSDDFFDYVDTV FYAHRAVRHGYDEDSPTWDFANSVFFTTTMLTSIGYGYVAPSTFGGRLFGVIYCLIDK PNSGIPLTLVTVANVAKFLSETIFFLHYELWNKCLEWKRKRKGEVEADPAQPMFGDDE NEEEILDRVRLVRFPPLTVFMFVFVYGCIAAWVVRYWETWTYVESLYFIFISILTVGF GDIRPSPGNIWVTLAFVVGKSTLKNYSEEIIPVGVILTTMCMDVVGRMYLKEIHYLGR KLKSNNPFYLLREAKARRRRAAMASLLAQLAKGMIFAHKDYNELARKKSKRKKEKRRG SHVLPNEKFMFARLPPDPPSDCQVVSTSAYSVRLAWAPPFSPDPDLTYNIRYRLKHNE DAKVRELRGIKGNTVEIMSVDSCSLYEFRITAHNKFGESKAVYLVQYTEPQLSPQHIL ATRLNANTIELTWEPPYKKSHEVKNYVVYFTENPNASLSEWEKIPVNGRRVVFPDLRF DWFYMFSATAVFKDGQRSPLSRALFIKTDKIEFHKHCVGHSKTIDVMDSICEKEENET TALLKRDYVSFAV" gene <894778..>895560 /locus_tag="CRE_29551" /db_xref="WormBase:WBGene00086161" mRNA join(<894778..894804,895229..895318,895369..>895560) /locus_tag="CRE_29551" /product="hypothetical protein" /db_xref="WormBase:CRE29551" /db_xref="WormBase:WBGene00086161" CDS join(894778..894804,895229..895318,895369..895560) /locus_tag="CRE_29551" /note="contains similarity to Pfam domain PF05005 Janus/Ocnus family (Ocnus); contains similarity to Interpro domain IPR007702 (Janus/Ocnus)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12722.1" /db_xref="InterPro:IPR007702" /db_xref="PFAM:PF05005" /db_xref="WormBase:CRE29551" /db_xref="WormBase:WBGene00086161" /translation="MRWDLEIRRVTDTETKEKKFVVRGYYRCTFHDDILQETKSSAPS GLKLKCVGGGRIKHDDAGKDLLVYGYSQGYGRADHQVAVDILKHKYPDYHIHFSNDGY " gene <895761..>897844 /locus_tag="CRE_29552" /db_xref="WormBase:WBGene00059997" mRNA join(<895761..895853,895896..897468,897630..>897844) /locus_tag="CRE_29552" /product="hypothetical protein" /db_xref="WormBase:CRE29552" /db_xref="WormBase:WBGene00059997" CDS join(895761..895853,895896..897468,897630..897844) /locus_tag="CRE_29552" /note="contains similarity to Pfam domain PF03941 Inner centromere protein, ARK binding region; contains similarity to Interpro domain IPR005635 (Inner centromere protein, ARK binding region)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12607.1" /db_xref="InterPro:IPR005635" /db_xref="PFAM:PF03941" /db_xref="WormBase:CRE29552" /db_xref="WormBase:WBGene00059997" /translation="MAPQTRNGRKKVVKVIPGTTVELKKNCGFKWIFKNKRNRYGRIG NDIIKDTILKIDRMTTGNKDSDRILNYYRNALSDCIKVGLEGLSPENRGNLFQIFPES HETPAAKTRKIKKELVVKEEVEAEKEEETMTISETSYTSEALAVRSETLTSSDDECDE TAISQQLEEMSITEEMELNIPLHTSTPLRENSVISVIKQEEIQVFGVVEKAETTQIDG SEVRILKSSIKKTVISQREDWISKREVKPTLGLERVENQSESTINLETPTHSGYRRNL FATKSESVVSTLPKPEPSILRNPKPENIEKKNHLSFLRSKVLNTKLEKGREIMKQKAA VIERKSVQIEKKSSSYKSPARNIPILKRTEMMSSHHRPLKKTRVQTFPEKEKMAPLLK TPVPVLSVMPLLTEFKNNAFLFQIPDTTLQTNTLKKTDTSYQNKTLLDYGLDYLSNEE DTDDECNPKNKIPSWAANFDVIADNVRTQFENPPFDVVEFFGEIEKVLRLSIGDSNTT ITFFPAQPVGNLWHQNSWQKAWIINMLVINTTRNLNFISNVQQRLPRKEILIKQFAIS SFLTEIRNAFSTFRQFLCERVHPKEKRRCMQNEKRIVRRKVYWSVLGCEGEPSIEQGF LN" gene <898052..>898956 /locus_tag="CRE_29553" /db_xref="WormBase:WBGene00059995" mRNA join(<898052..898147,898327..898439,898614..898744, 898793..>898956) /locus_tag="CRE_29553" /product="hypothetical protein" /db_xref="WormBase:CRE29553" /db_xref="WormBase:WBGene00059995" CDS join(898052..898147,898327..898439,898614..898744, 898793..898956) /locus_tag="CRE_29553" /note="contains similarity to Haemonchus contortus Defective mitochondrial respiration family member protein 1.; TR:A8QK95; coded for by the following C. remanei cDNAs: DY525295, DY525860, DR406827, DY526001" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12528.1" /db_xref="WormBase:CRE29553" /db_xref="WormBase:WBGene00059995" /translation="MSLSLLTPRLVTKCTVARILVVRNSSSRLTLSHEQSIKINDQQG FFKYQRDVSRDARYSNPAKPGDTASRFMFRKLGHAYEIYPLFGLLAIWCVLFGYTVYY SFEKAEIWLDRSHTTAPWDWERIRNNYWKKPTLVFDPTGVTHQRLEIMETLQDEMVAA AKERGTR" gene complement(<899626..>900181) /gene="Cre-rps-15" /locus_tag="CRE_29761" /db_xref="WormBase:WBGene00059994" mRNA complement(join(<899626..899751,899802..900024, 900075..>900181)) /gene="Cre-rps-15" /locus_tag="CRE_29761" /product="CRE-RPS-15 protein" /db_xref="WormBase:WBGene00059994" CDS complement(join(899626..899751,899802..900024, 900075..900181)) /gene="Cre-rps-15" /locus_tag="CRE_29761" /note="contains similarity to Pfam domain PF00203 Ribosomal protein S19; contains similarity to Interpro domains IPR005713 (Ribosomal protein S15, eukaryotic/archaeal), IPR002222 (Ribosomal protein S19/S15); coded for by the following C. remanei cDNAs: DR780187, DT935804, DT936271, DR406671, DR776907, DY528550, DR777707, DT936111, DY524789, DY527109, DR406641, DR406569, DR777697" /codon_start=1 /product="CRE-RPS-15 protein" /protein_id="EFP12495.1" /db_xref="InterPro:IPR002222" /db_xref="InterPro:IPR005713" /db_xref="PFAM:PF00203" /db_xref="WormBase:CRE29761" /db_xref="WormBase:WBGene00059994" /translation="MATQDDAHLAELKKKRTFRKFTYRGVDLDQLLDMSREQFTKLLP SRMRRRLDRGLKRKHLALIAKVQKAKKAAGVLEKPATVKTHLRDMIILPELVGGVIGI YNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPGIGATHSSRFIPLK" gene <900955..>903481 /locus_tag="CRE_29554" /db_xref="WormBase:WBGene00059993" mRNA join(<900955..901226,901594..901698,901754..901965, 902014..902425,902468..902582,902631..902837, 902887..902997,903071..903178,903269..>903481) /locus_tag="CRE_29554" /product="hypothetical protein" /db_xref="WormBase:CRE29554" /db_xref="WormBase:WBGene00059993" CDS join(900955..901226,901594..901698,901754..901965, 902014..902425,902468..902582,902631..902837, 902887..902997,903071..903178,903269..903481) /locus_tag="CRE_29554" /note="contains similarity to Pfam domain PF00657 GDSL-like Lipase/Acylhydrolase; contains similarity to Interpro domain IPR001087 (Lipase, GDSL); coded for by the following C. remanei cDNAs: DT935422" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12723.1" /db_xref="InterPro:IPR001087" /db_xref="PFAM:PF00657" /db_xref="WormBase:CRE29554" /db_xref="WormBase:WBGene00059993" /translation="MRLQLLLCFLYYAVAGSINPEVDQKELRGEFHDETRHLVDYEDF STNLTDYASRRTSDDDKLSPEEQKRREKEGPNSDEVDDDSSDISEERERDSVDHQHLK SLTAIKPEKLQPVAGVINSAFNDRKTFSCPRTKLELMTGRSVADISPEDITIIAAMGD ALATGIGLWPNADIEFRGASFPIGGDSTIDGLITIPNILREFSPKIVGVSHGMGADLP DHQLNVAQTGASTKDLYKQAVELTRRIKKLTEVNYLEEWIMIIITIGTEEVFSIFDLL IHYSNINFQICTRCDGPSYEHIKRAIEHLQIEIPKALVVLLGPVHVSSFHEQKSNLLK SRCQCSRNQTEGFMYDVSRKWSKVWRDIQKYVETGVTSRPTFGMISYPMVTITSRYPS GLFIRDKPLLNRRGHNYATKWLWNRLIGGDLYNLSSATLSQDNYFCPSVGCPYFRTYA NHKKCTTLTHDEAKDQELVSHNGKTIKTSRRSIRFLYNLAMVVVGAAFCTVCILGTFF YQKSKMGDHGRFEIVEEPQKKLEEAQKEEQKALLTRQNTRAQSELAQTSSGIQLAPIS VGRHKSFLGTITEGTPDV" gene <904481..>906346 /locus_tag="CRE_29555" /db_xref="WormBase:WBGene00059992" mRNA join(<904481..904636,904700..905215,905282..905531, 905580..905683,905864..906025,906069..906143, 906191..>906346) /locus_tag="CRE_29555" /product="hypothetical protein" /db_xref="WormBase:CRE29555" /db_xref="WormBase:WBGene00059992" CDS join(904481..904636,904700..905215,905282..905531, 905580..905683,905864..906025,906069..906143, 906191..906346) /locus_tag="CRE_29555" /note="contains similarity to Pfam domain PF07914 Protein of unknown function (DUF1679); contains similarity to Interpro domains IPR012877 (Protein of unknown function DUF1679, Caenorhabditis species), IPR015897 (CHK kinase-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12554.1" /db_xref="InterPro:IPR012877" /db_xref="InterPro:IPR015897" /db_xref="PFAM:PF07914" /db_xref="WormBase:CRE29555" /db_xref="WormBase:WBGene00059992" /translation="MTVKPKTILENGDGLFNTHVTVEDLEEVIQDQMKTNSKLGKNTK YTVIGEGNIVSRSQKLSQSQSSQFPKSNCSSSNSFLRHFQGIMSRIILVEPQWTISDD HLPSKFVLKIPYCVHIQGLIGQMIAMNPMSEEQEAGLWAMWESEIQSIHNREVNINKI VEKWNKREDLLNPRVYFSKKYDSENRNKGFIGMEYAEDSIVRHLYVNVKPRELYPVSV KLFLLFVLKFVAHFQASGLHLTDEEKQSISGFDIEKIAGPLMSEDGIKGILQQVRMMN PEKFDEKVKKIEAFGMEIVNFELASNLNKYVGIDQPVLVHGDLWATNVLWKEKKEEWI VSKIIDYQGIHMGNPAEDLVRLFVSTLSGPDRQKYWEKLLEKFYKFFLEALQSQNAPY SLEQLKESYRCYFVFGGVGLVQLMGPVTQRKLTMCSPDENVEEYQKVVLGKMEHLLDD VEKFHLHSRNVTKSYKKPVTRI" gene complement(<906692..>910719) /gene="Cre-hum-1" /locus_tag="CRE_29762" /db_xref="WormBase:WBGene00059991" mRNA complement(join(<906692..906765,906812..907261, 907318..907529,907575..907819,907866..908042, 908091..908198,908249..908420,908464..908642, 908691..908772,908825..909226,909277..909507, 909554..909635,909683..910541,910588..>910719)) /gene="Cre-hum-1" /locus_tag="CRE_29762" /product="CRE-HUM-1 protein" /db_xref="WormBase:WBGene00059991" CDS complement(join(906692..906765,906812..907261, 907318..907529,907575..907819,907866..908042, 908091..908198,908249..908420,908464..908642, 908691..908772,908825..909226,909277..909507, 909554..909635,909683..910541,910588..910719)) /gene="Cre-hum-1" /locus_tag="CRE_29762" /note="contains similarity to Pfam domains PF06017 (Myosin tail), PF00018 (SH3 domain), PF00063 (Myosin head (motor domain)) (2)contains similarity to Interpro domains IPR010926 (Myosin tail 2), IPR001452 (Src homology-3), IPR000169 (Peptidase, cysteine peptidase active site), IPR001609 (Myosin head, motor region); coded for by the following C. remanei cDNAs: DR776211" /codon_start=1 /product="CRE-HUM-1 protein" /protein_id="EFP12602.1" /db_xref="InterPro:IPR000169" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR001609" /db_xref="InterPro:IPR010926" /db_xref="PFAM:PF00018" /db_xref="PFAM:PF00063" /db_xref="PFAM:PF06017" /db_xref="WormBase:CRE29762" /db_xref="WormBase:WBGene00059991" /translation="MAFHWQSKVNVQHAGVDDMVLLPKLTEQSIVENLKKRLQANSIF TYIGPVLISVNPFKQMPYFTEKEMLLYQGAAQYENAPHIYALADNMYRNMLIDNESQC VIISGESGAGKTVNAKFIMNYISRISGGGQKVQVEPYFCVLAGNSSFQHVKDVILQSN PLLEAFGNSATVRNWNSSRFGKYVEIVFSRGGEPIGGKLSNFLLEKSRVVHQNEGDRN FHIFYQLCAGADKNLRSTLGIGELQYYNYLNMSGVFKADDTDDGKELENTLVGIIQKS RLSTSVLYLQHAMKVVGVNDQEQLEVLRIVSAVLHIGNIAFTEENNFAAVSGKDYLEF PAFLLGLTNADIEAKLTGRKMESKWGTQKEEIDMKLNVDQANYTRDAWVKAIYARLFD YLVKKVNDALNITSQSSSDNFSIGILDIYGFEIFNNNGFEQFCINFVNEKLQQIFIEL TLKAEQEEYVREGIKWTEIDYFDNKIVCDLIEIKRPPGIMSLLDDTCAQNHGQREGVD RQLLTTLSKSFAGHPHFAPGSDSFLIKHYAGDVTYNVDGFCDRNRDVLYPDLILLMQK SSNAFIRSLFPENVAASAGKRPTTFSTKIRTQANTLVESLMKCSPHYVRCIKPNETKR PNDWEESRVKHQVEYLGLRENIRVRRAGFAYRRAFDKFAQRYAIVSPQTWPSFQGDQQ RACEIICDSVHMEKGQYQMGRTKIFVKNPESLFLLEETRERKFDGFARVIQKAWRQFA ARKQHIKQKEQAADLMYGKKERRRYSLNRNFVGDYIGLEHHPTLQSLVGKRQRVLFAC TANKYDRKFRVSKLDVLLTANHLTLIGKEKVKSGPEKGKIVEVIKRQLDLPQIKSIGL SPYQDDFVIVYVSGEDYSSLLETPFKTEFCTALSKAYKERTNGTLHLDFRNSHIVSYK KMKFDFSDGKRTVQFGCDGSSSAQKTLKPNGKVLNVNIGTGMPNTTRPSTERPQGGYT PRRDQLRTSTRRTNKNSNGPQPMRAPVPAHGINNNYNQPSPHSSAPAPVSTNHQYNQE PARIPVMGNVISQLNNMNMAASGNNNPAAGRGPPPARGPKPPPPAKPKLNPVVIAVYP YEAQDVDELSFEAGAEIELMNKDASGWWQGKYNNRVGLFPGNYVKE" gap 912744..912753 /estimated_length=10 gene complement(<914248..>915524) /locus_tag="CRE_29763" /db_xref="WormBase:WBGene00086102" mRNA complement(join(<914248..914495,914663..914821, 914866..915000,915170..>915524)) /locus_tag="CRE_29763" /product="hypothetical protein" /db_xref="WormBase:CRE29763" /db_xref="WormBase:WBGene00086102" CDS complement(join(914248..914495,914663..914821, 914866..915000,915170..915524)) /locus_tag="CRE_29763" /note="contains similarity to Pfam domain PF02892 BED zinc finger; contains similarity to Interpro domains IPR003656 (Zinc finger, BED-type predicted), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12356.1" /db_xref="InterPro:IPR003656" /db_xref="InterPro:IPR007087" /db_xref="PFAM:PF02892" /db_xref="WormBase:CRE29763" /db_xref="WormBase:WBGene00086102" /translation="MSHITLFARQTETKNMVQCCFCEKMYKIDNGSSGFIRHLRCKHP EFLHKMGGVSERSKERKMKSSDTLLLGKGETENNNIDDKVKVEPSDGMILDTEEFSSN QILANFVNQMELGQSDVRIAEKRPRISPSPLEILTAPDKSFEEPDFKIFAGDNPLQKF LSDINRKFGVQNGEITSQDSNQSGEASTSMTALEMPISQKASRDPSPNSSLISDINGG TETVDSSPRLRFNPMIPFGCVFCPCSFPLINDLHIHVTHVHRTSYRCNCCLAEFVAPE HLEHHFTMVHVTRGVVETTNSQ" gene complement(<919185..>919948) /locus_tag="CRE_29764" /db_xref="WormBase:WBGene00059990" mRNA complement(join(<919185..919198,919312..919467, 919509..919583,919798..>919948)) /locus_tag="CRE_29764" /product="hypothetical protein" /db_xref="WormBase:CRE29764" /db_xref="WormBase:WBGene00059990" CDS complement(join(919185..919198,919312..919467, 919509..919583,919798..919948)) /locus_tag="CRE_29764" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12511.1" /db_xref="WormBase:CRE29764" /db_xref="WormBase:WBGene00059990" /translation="MSVEDEEYFESITPEFIAHLNSESGRPFIRSGSLPVGEVQKDSK KNYLKRPREDVTSRSRVEIINWVLSSDELAKACVCPYCLKIHSRRDNARVHMKNYHKG LPIREFYQGIDASLEEVRRANETGKYMER" gene <921269..>921901 /locus_tag="CRE_29556" /db_xref="WormBase:WBGene00086116" mRNA join(<921269..921300,921345..921515,921790..>921901) /locus_tag="CRE_29556" /product="hypothetical protein" /db_xref="WormBase:CRE29556" /db_xref="WormBase:WBGene00086116" CDS join(921269..921300,921345..921515,921790..921901) /locus_tag="CRE_29556" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12450.1" /db_xref="WormBase:CRE29556" /db_xref="WormBase:WBGene00086116" /translation="MAGADVEKLLKEEHIKVDDLLTDGPNNRLNLQIHTDDTTVGNTK GGKKSKYRKASRRVHRTMVITKHEDVLPVFLPIVSFCGALLLFIQSLIAIAILFTPFP SN" gene <922579..>923615 /gene="Cre-fog-3" /locus_tag="CRE_29557" /db_xref="WormBase:WBGene00059989" mRNA join(<922579..922650,922703..922901,922947..923049, 923097..923221,923272..923360,923409..>923615) /gene="Cre-fog-3" /locus_tag="CRE_29557" /product="CRE-FOG-3 protein" /db_xref="WormBase:WBGene00059989" CDS join(922579..922650,922703..922901,922947..923049, 923097..923221,923272..923360,923409..923615) /gene="Cre-fog-3" /locus_tag="CRE_29557" /note="contains similarity to Pfam domain PF07742 BTG family; contains similarity to Interpro domains IPR015676 (Transducer of ErbB-2), IPR002087 (Anti-proliferative protein); coded for by the following C. remanei cDNAs: AF354170" /codon_start=1 /product="CRE-FOG-3 protein" /protein_id="EFP12310.1" /db_xref="InterPro:IPR002087" /db_xref="InterPro:IPR015676" /db_xref="PFAM:PF07742" /db_xref="WormBase:CRE29557" /db_xref="WormBase:WBGene00059989" /translation="MYTEVREVVNFVCRYLFGRIPRRPTGIFASELANSLVCQFSSSW DINNPDNGQMERVVYINCRNEGSSKCFGSCAQEAGLRREEVLGHLPINVCVYASPGKV FFRGSLDGIEVPIWNGEVNADDTYQPVAEYIVRSASGRAESVSNLGAAQKPVLIGMKP LPTNDPAIHELVNNMYIPLGLEKCDEDFSNLSHMQERYPYLFAFKPSSAQTYTGLEFA QTRFGSSKSRPDLQTMLNIKQLSSQHATSSTNFSAPMKEQMIYSHY" gene <927781..>927963 /locus_tag="CRE_29558" /db_xref="WormBase:WBGene00086153" mRNA <927781..>927963 /locus_tag="CRE_29558" /product="hypothetical protein" /db_xref="WormBase:CRE29558" /db_xref="WormBase:WBGene00086153" CDS 927781..927963 /locus_tag="CRE_29558" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12685.1" /db_xref="WormBase:CRE29558" /db_xref="WormBase:WBGene00086153" /translation="MSGKLEIISLEEFDEPFEEILKSEAEEAEKYADKWSGNSIDTWE TVSSVGVNVSYSNYQF" gene <931146..>935722 /locus_tag="CRE_29559" /db_xref="WormBase:WBGene00059988" mRNA join(<931146..931263,931312..931396,931489..931723, 931933..932361,932970..933156,933204..933721, 933904..934141,934188..934711,934744..934873, 934966..935070,935121..935300,935353..935434, 935476..>935722) /locus_tag="CRE_29559" /product="hypothetical protein" /db_xref="WormBase:CRE29559" /db_xref="WormBase:WBGene00059988" CDS join(931146..931263,931312..931396,931489..931723, 931933..932361,932970..933156,933204..933721, 933904..934141,934188..934711,934744..934873, 934966..935070,935121..935300,935353..935434, 935476..935722) /locus_tag="CRE_29559" /note="contains similarity to Pfam domains PF07645 (Calcium binding EGF domain), PF00057 (Low-density lipoprotein receptor domain class A), PF00084 (Sushi domain (SCR repeat)); contains similarity to Interpro domains IPR000742 (EGF-like, type 3), IPR000436 (Sushi/SCR/CCP), IPR000152 (Aspartic acid and asparagine hydroxylation site), IPR002172 (Low density lipoprotein-receptor, class A, cysteine-rich), IPR001881 (EGF-like calcium-binding), IPR016060 (Complement control module), IPR016186 (C-type lectin-like), IPR013032 (EGF-like region, conserved site), IPR001304 (C-type lectin), IPR013091 (EGF calcium-binding), IPR001981 (Colipase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12662.1" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000436" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR001981" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013091" /db_xref="InterPro:IPR016060" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00057" /db_xref="PFAM:PF00084" /db_xref="PFAM:PF07645" /db_xref="WormBase:CRE29559" /db_xref="WormBase:WBGene00059988" /translation="MTNLRWFLQVLSCLIVLGYCTDPRYNDSDMYDDCFQGAPGWYHL TATCIFPLTQFERNYSTAAQMCGAVNHSIGYRETNWLIAQQLLEMFTNEKSRDLMKLY WTGLSVRNGSIVVESEDATNDTVANVAVFTSMYNPLWAEGQPSQSLSSNELDGSCIAL DLRNSSNFGWRSLPCSSQLPILCQNYACLPGTFRCADNSKCIPSSFQHDGFNDCLDGS DEMPVTQSIPLSSSTPNSLLSNVLRENPVYEWPMIVSSGGILSPTTVRYGRGECTHRW TVLSPNDQHFIIWIKWMSPTTSTAIYVEGKDQNGRIYLNSRNATSSFTLLSSSFVLTA SDTDTRKIEFQVHYQEADKTICRITENNQLFFNSESIPMSCNYRFTTKIPSSYVAILI RKCEGPSPIVSTIQFNNSTVSLTRRQSKKLLIIPSNSLNIHVNSTWPGSETQLDFQFF ELRPGEESVDVFMIDSDFEIEWIPKSSEICMEGQFRTLTVNMILTSSDESENSSQSST WNVERFLKSCSEDNVQIVSKNQSAYVSNLGSVTGFGPTTVVIHQSAEPFEFYSIYALQ GIARDGSGWAFDEGVSTTTISTTLSTTDIISTTTSSPSSGTKCKLPTINNGYIKAVSD HAYSVGTIVSVNCDEGYMLDSLPYNIQCSDNGTWIDGENRAYPPVHPIVKCLHINCPS ETGYEIDNSMTPDTYETSYGTVRRYQNRSTYGYQPFCICGDDKKWLADWMCYNTEHLT KYEIPNGCIIPEVHDAIFVTQLPNDQYVAPSGYTVSFSIEMDCMVCPTVKKTYRCLDG LWRASNGSVQAYDSFECRCQDEPGWIDPCLPHGTYVQYQGYYSCQCENGWKYGDGTCV DIDECNETSSFCDPFAKCVNTNGSYYCECPINYHLFNASNFNPSQWGSIQRYLIDGYS CVETTCIYDIEWSQWNIQVIKPPTLSPYYKSGNSMGYLYATNMCDSDYKCLLQFKETC LNGDWLPRPNPLVACKALDQSVYSFQPVAPYFHVFQTIDLACNQESKIMIGSF" gene <938992..>940410 /locus_tag="CRE_29560" /db_xref="WormBase:WBGene00086135" mRNA join(<938992..939018,940001..940159,940300..>940410) /locus_tag="CRE_29560" /product="hypothetical protein" /db_xref="WormBase:CRE29560" /db_xref="WormBase:WBGene00086135" CDS join(938992..939018,940001..940159,940300..940410) /locus_tag="CRE_29560" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12584.1" /db_xref="WormBase:CRE29560" /db_xref="WormBase:WBGene00086135" /translation="MPRPRKQNLNVLYTTTSHHRATRQGRLRTEEEEKENKGESIPQG DNPEGKKERAVPLWPMVQKKSVNFSSASTQLWTHKAGVVVVSSSSCVVVAGVVV" gene <942704..>953301 /locus_tag="CRE_29561" /db_xref="WormBase:WBGene00059987" mRNA join(<942704..943211,943959..944135,944185..944549, 944624..945036,945078..945163,945215..945331, 945381..945515,946277..946356,946407..946596, 946645..946813,946860..946971,947016..947127, 947198..947312,947360..947684,947755..947862, 948074..948187,948391..948453,948548..948683, 948735..949072,949120..949212,949259..949408, 949501..949609,949659..949733,949783..949951, 950607..950850,950901..951029,951078..951241, 951293..951429,951519..951689,951736..951861, 951910..952139,952184..952261,952304..952480, 952526..952629,952805..953240,953287..>953301) /locus_tag="CRE_29561" /product="hypothetical protein" /db_xref="WormBase:CRE29561" /db_xref="WormBase:WBGene00059987" CDS join(942704..943211,943959..944135,944185..944549, 944624..945036,945078..945163,945215..945331, 945381..945515,946277..946356,946407..946596, 946645..946813,946860..946971,947016..947127, 947198..947312,947360..947684,947755..947862, 948074..948187,948391..948453,948548..948683, 948735..949072,949120..949212,949259..949408, 949501..949609,949659..949733,949783..949951, 950607..950850,950901..951029,951078..951241, 951293..951429,951519..951689,951736..951861, 951910..952139,952184..952261,952304..952480, 952526..952629,952805..953240,953287..953301) /locus_tag="CRE_29561" /note="contains similarity to Pfam domains PF00008 (EGF-like domain), PF07699 (GCC2 and GCC3) (3), PF07974 (EGF-like domain), PF02494 (HYR domain), PF00084 (Sushi domain (SCR repeat)); contains similarity to Interpro domains IPR000742 (EGF-like, type 3), IPR003410 (Hyalin), IPR000436 (Sushi/SCR/CCP), IPR006209 (EGF-like), IPR011641 (GCC2 and GCC3), IPR016060 (Complement control module), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12446.1" /db_xref="InterPro:IPR000436" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR003410" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR011641" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013111" /db_xref="InterPro:IPR016060" /db_xref="PFAM:PF00008" /db_xref="PFAM:PF00084" /db_xref="PFAM:PF02494" /db_xref="PFAM:PF07699" /db_xref="PFAM:PF07974" /db_xref="WormBase:CRE29561" /db_xref="WormBase:WBGene00059987" /translation="MTEKSTGIPQNTATTGTSLGRTVTGPAKRNIDNTVYAANKHATT CKRFLTNLNSSNITPSTDQLKKLDSMLMETHKQVANLKALPTYVAGKKAHQLVSESAN KEKFHKELDNYLNISNYLTAIATGEELIKLLENVLSEHGQTSTTPVNGFFPFSCPYLS LNKRVIEKLYQSCSDLTQFIPPHMTFGVVNPLGNGFEAGTVVYFSCDHGYILSPFVTA TKCVEGPSGYIWSEDIPTCIPPTSTAGSTLATTTYTTGSSPFTFPFIGTTLSATPSTS VAGSTLSATSSSVGSTLPATPSTSVAGSTLSANSFSTVSGEPFVAFDDVVIEGSMTFE EKNMLDQPQIWTQTGDWIWTPSGCIVHQWTFPISFFVTSIPIRLNSNQIELLIDISQC NSSVQVSVTSSSDGFIPPISDFRPVMNTTSSGSFVVKLSNLKQYLAVAITANGYVQVC GVTIRENICDEVDYNGLHLASSRPFSMRRYLPATCGSRVTPISGYCDGRRGWVIQNKP CICQPTPQCATIAPIRQLDTFSECSLNSCQNGVCQQHDGYFICLCNQYFISAVTDGGE PYCKPDHCSFTSDSRNSGYDCETGNINNSKTCNESYFGNFCQYKGTLANNSYIYLLEY ESDEAIATNVCESVDTEYAMPQVCSNEPTTTLLPNNQDPCTLTCHAGSCQRSPPPFNG GVICMCDTDQYGRQCTVSKFCYNESASNHYTCLNGGTCSVRPDKKCFCLSNFGGDYCE TPLVEDNCYEGEKDCVHGSCRRENDRPYCNCDSGFIRDSDGNCTVLWDMCYHNNPCQQ YGSCMFNVTSGVQNCNCTSSGWQGDYCELPPVQTDCSVCQHVNKCFDNFTSNARCQCS PGFSGDFCSDPVEDCLFEPCFNSGTCNYFNVDIDGDLIETYNCTCPTGIDMILSRSFE NIYPGYNGTNCETRVVPDCNTFTCENGGTCEMTSHGTARCQCTTQFYGPNCQNSCSDQ CAHSYGCIQNTNESIICDCYDGFLPPLCDKVDDVCKANVLFCQNSGTCNSTTESCDCP NYYDGTYCEKNTHSCRDINCFNGGTCLDYNATCQPCIIYNPDGSTQPYCKNNGNCTNL ENGASCDCNGTEFTGRRCEIRANFNFNLVFNGMNYAPDIVTRPFYDVSIAQFTICSFV QYNHPVVESTGTPESTIPTLLPWLVVKGYSKSQMMVFDNKGFFICNPDDAECTREEIS KNSNFRQTPITANTWHHYCIVSPEDQTSPSYTVYLDGLPFPQLAPLFNPGTSGYLQLA PPDLTKRTDDRFVGMISMTQLYIIRLSETQINQLAFDCYTTISETNTEIANNTLISWN GGFTRVSSSNPGVFIDPSGICSSVKCMFGRQAKSNNYNSTGSCAKDRISPTVLKCPAN KNATTTEDFIKVTWSDDEISFFDNIGVVRVEVNYHNGQQFGVGITAVRYIAYDAAGNS AECTFDVIVVQKSCPSNDQIVVDNGRISFGPTRMAPFTSKVVLVECDDNLYPIDNRPG FYVCDIMGNFNYGGWVDDTQKKYYLPACGKTVPAVQEINGTVVGNGTCKQVFEKLRET IWSAANCNQQSSCSIMILPPCNETNSVGNTRETENDDFALQYTFSTSNATETISTSVL KDLQDNFRLVRQDSTVDCDPSFPIHDTSGNVTVCVSCADGTFANMTANECTDCPIDTY RNSASHDQFACTSCPDKMITGDVTGAVDESQCYQNCIAGQYESKGVCLPCPEGTFAPR EGLRRCICCGFDLSTFGNGSTSFDECQKTCDPGQEMIRTETEFAPYCQDCAVGFYKED TRGPCIQCPRGLITASHGSKSINDCNVLHCIDQNTRRNGNIKVGPNTVYSEMCITCEQ GTFQNKPNSDSCIQCSDLSDDITDVPVTCQSTCSAEIPTEGCNCQLQKNKTNSMTIRN CVPEVQPDHKNSNAIKIILPIVFGVLLIIIVVVLFCFRKQIIAWVRKSDTSDNQHVAV SHWNPQRISEEYSPHYTSDSQSSIRVRNKPPAPTIPRPNLRIVTSREEMDQLPPLPSS STPSFHVDSAYNNSKHVGFSSGIPSSSRNLRSNISTIQPLNSSNIFFEANGSPKIIRE RTDTLSDDSSLGSFF" gene complement(<953803..>955902) /locus_tag="CRE_29765" /db_xref="WormBase:WBGene00059986" mRNA complement(join(<953803..954041,954088..954202, 954285..954385,954427..954482,954525..954644, 954687..954905,954949..955423,955494..955584, 955630..>955902)) /locus_tag="CRE_29765" /product="hypothetical protein" /db_xref="WormBase:CRE29765" /db_xref="WormBase:WBGene00059986" CDS complement(join(953803..954041,954088..954202, 954285..954385,954427..954482,954525..954644, 954687..954905,954949..955423,955494..955584, 955630..955902)) /locus_tag="CRE_29765" /note="contains similarity to Interpro domain IPR016186 (C-type lectin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12628.1" /db_xref="InterPro:IPR016186" /db_xref="WormBase:CRE29765" /db_xref="WormBase:WBGene00059986" /translation="MVSFELEAFRAVLVLFLQNFVLLSALFLVPLARSDNGNKFNDFQ LQYDKKADRSSMLYCFVFNGKIANVDPNNEEKGYKCEVNMQTWTKDDNHAKDYCESRF PYYIIGAKPTAEATTTCTFQINLKCADDYWQIHGKCYKVTNEKYTWEDAKNKCSAETQ GKDALMKPKVAHYYSITMNNYLQDMIGILDAWVYVSDLRDYFVNGKGNAAVYVQDGAY KFDTRKGDILMDDHHSTHQVICEYTPGMTMAEMFYLADIYSEIYPIHVYTDGAIIPSA SFMTVHQTGLRPINDQANYGGKAEKFTTDNIGDICTSIGNILNVNSYPMTAIEEEFND VKSYLRDQRFFLTNAFKNDGCSLKDFKQKNGNDADYQLYQGKQQGKDNYCHSHSLSFN KDGRFPTMAGMRAPALCTLHTFNWVFADCPPAPPGNNYEVVRFDRKNRVFCHYIENNN PTDYPTAVRKCEDFGAALSGFDSYDEYKKVLDKLKPDPSASSRLNIDYHYFLGGRSPC KVDCDNGIERYKASWDSNVAVNTTFLNSYNFKELTKSDVSRISLRQDDNAFHLQ" gene <956906..>959511 /locus_tag="CRE_29562" /db_xref="WormBase:WBGene00059985" mRNA join(<956906..957097,957143..957395,957556..958100, 958920..959286,959330..>959511) /locus_tag="CRE_29562" /product="hypothetical protein" /db_xref="WormBase:CRE29562" /db_xref="WormBase:WBGene00059985" CDS join(956906..957097,957143..957395,957556..958100, 958920..959286,959330..959511) /locus_tag="CRE_29562" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain; contains similarity to Interpro domains IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12540.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00059" /db_xref="WormBase:CRE29562" /db_xref="WormBase:WBGene00059985" /translation="MLMKILITFGLFVLTNPQVDRDWSFQSMCAFWNGDSSYRPRTNG LQSMEGDKCTFDFPVSTDTQESAKRYCEEHVPYHINEATSGFPTKCAAEATLVCQSGW IQLFGRCYKMTKELKTKQDAVVHCKAQKDDATIAFIHRETLPFRINDYFTRVSRIWVD ASEAITKDLIDNNLNGNLILALDGFEYNLPNIALTRVDSSETAMVLCEYTPSITIAES HYLLRRYGEIYYPTIFTSEKAYVRSTSSIQRNNENRMADNDYCSKLLKPFLGNVKAQS AVPTEEMLRGITVKRDATIIRTSVYSGDAKRDSRISSDCTPSKARNYGIDYAGNNGNP FFKSLKDDPIWRSGEPKETCDGGSWSTGISLSRDHDKKLEAMSDARYAPIYCQTNFET MGYGDCPDGFQTFYRKEIGQKWCHIFVSKKNTFDGAELECQKMGGHVSGFTNQEELDL MDKMWGDSGADPNETAWIGAKRREECITMGIASKIGGFHPDDNNPCSRLSIRMDQRGC SESS" gap 962964..964375 /estimated_length=1412 gene complement(<965928..>966725) /locus_tag="CRE_29766" /db_xref="WormBase:WBGene00086141" mRNA complement(join(<965928..966060,966131..966164, 966644..>966725)) /locus_tag="CRE_29766" /product="hypothetical protein" /db_xref="WormBase:CRE29766" /db_xref="WormBase:WBGene00086141" CDS complement(join(965928..966060,966131..966164, 966644..966725)) /locus_tag="CRE_29766" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12636.1" /db_xref="WormBase:CRE29766" /db_xref="WormBase:WBGene00086141" /translation="MSTEVNLSPLCIAFLQVSWVTYAVTTQSFLGYLCGYDTEPRRFK LMSTEVNLSPRFIAFLQVSWVTYAVTTQSKIGGKKSDE" gene complement(<967464..>968223) /locus_tag="CRE_29767" /db_xref="WormBase:WBGene00059984" mRNA complement(join(<967464..967738,967788..967885, 967970..>968223)) /locus_tag="CRE_29767" /product="hypothetical protein" /db_xref="WormBase:CRE29767" /db_xref="WormBase:WBGene00059984" CDS complement(join(967464..967738,967788..967885, 967970..968223)) /locus_tag="CRE_29767" /note="contains similarity to Brugia malayi 24 kDa secreted protein.; TR:O76497" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12691.1" /db_xref="WormBase:CRE29767" /db_xref="WormBase:WBGene00059984" /translation="MHFSLLLFLSIVSLATSQMIRQCGCGEIEQCLGSATGGFMKCAD QCQNHVAAMGANYPALRQCMLQKEPAITRAANCQKSNLQNACSRSGGGMVRKRYPETL KLAAFTEVNSILQRSGIQAEAKAFLSVGKKFATCVMKCMDRGSTGNCYKKLGCGLDLP PDSILVQSTKQCAINSGFDTAGVRQLCNCVAGTGVRNLAPLCNRITIS" gene complement(<971334..>974933) /gene="Cre-unc-29" /locus_tag="CRE_29768" /db_xref="WormBase:WBGene00059982" mRNA complement(join(<971334..971401,971449..971569, 971638..971919,972109..972344,972401..972644, 972697..972755,973091..973197,973244..973353, 973407..973451,973507..973578,973624..973691, 974870..>974933)) /gene="Cre-unc-29" /locus_tag="CRE_29768" /product="CRE-UNC-29 protein" /db_xref="WormBase:WBGene00059982" CDS complement(join(971334..971401,971449..971569, 971638..971919,972109..972344,972401..972644, 972697..972755,973091..973197,973244..973353, 973407..973451,973507..973578,973624..973691, 974870..974933)) /gene="Cre-unc-29" /locus_tag="CRE_29768" /note="contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region); contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor, N-terminal), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region)" /codon_start=1 /product="CRE-UNC-29 protein" /protein_id="EFP12463.1" /db_xref="InterPro:IPR002394" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="PFAM:PF02931" /db_xref="PFAM:PF02932" /db_xref="WormBase:CRE29768" /db_xref="WormBase:WBGene00059982" /translation="MRPSKWLLLTVGTAFLLNTSNVSASDDEERLMVDVFRGYNSLIQ PVRNSSELPLIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQ IRVSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFF PFDEQVCTLVFGSWTYNENEIKLEFVQAELVDVSEYSASSIWDVIDVPASLVNKRSRI EFQVRIRRKTLFYTVVLIIPTVLMAFLSMAVFFLPTDSGEKITLTISVLLSIVVFLLL VSKILPPTSSTIPLMAKYLLLTFVLNVITILVTVIIINVYFRGPRTHRMPHWVRVVFL QYLPKLVCMKRPKSASERSAVRSGMAQLPGVGQFTLSPSAHHPLCPSADDRTATIRNT ALNETSAYYPLSTDALRAIDAIEYITEHLKRDEQHKSFRDDWKYVAMIIDRLLLYVFF GITVGGTCGILFSAPHVFQRIDQQEMLDRLKEKYDTASNIP" gene complement(<976837..>979042) /locus_tag="CRE_29769" /db_xref="WormBase:WBGene00059981" mRNA complement(join(<976837..976977,977023..977345, 977394..977782,977831..977976,978023..978196, 978249..978529,978587..978702,978897..>979042)) /locus_tag="CRE_29769" /product="hypothetical protein" /db_xref="WormBase:CRE29769" /db_xref="WormBase:WBGene00059981" CDS complement(join(976837..976977,977023..977345, 977394..977782,977831..977976,978023..978196, 978249..978529,978587..978702,978897..979042)) /locus_tag="CRE_29769" /note="contains similarity to Pfam domain PF09445 RNA cap guanine-N2 methyltransferase; coded for by the following C. remanei cDNAs: DR408623" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12654.1" /db_xref="PFAM:PF09445" /db_xref="WormBase:CRE29769" /db_xref="WormBase:WBGene00059981" /translation="MDSSSESVGDDQGDYQYPWFPMGHFGINFIQTDGSKAYVEGELS RAYIKDYELLKASKRKKEEKQPAEQLQVDMDEMSLQDSVPEDNGEATDKLLEDKDMAY EVLPKWSSDKKKGKKRKAKGRYNYHSFEEYWDVSSFWVIQRTWLNDFGCQMTEENQKE LLKKCDEMKPIYPIDQHENLLENPDYQNITKSLTETKEGVTFEEIYAEHCDLIKKQTE NDYHIYQTKEVTRRCKDMINRVKRLGYAPGFEESQLPSFYDLNDKDIKIDKPLIKEVR YQIDESYAKKFVGDKFEESTASTSESSSSAESKIESTAQLNPKEIRFNFDPETEQHLI ASNAEKLYANDPEISKYYYQRYRLFSRLDEGIIMDREGWFSVTPEAIAEHIADRVVRH NVSVVVDAFTGVGGNAIQFALRGAHVIAIDMDPVRLKCARENARVYGVADYIDFICAD FFDVAATWAADKKLAPKVDAVFLSPPWGGPSYLKSKEFDLATGCCPNGIDIFDVSLKI SPNIAYFLPRNTKVSQVLTELAIKAKTRMEIEQSSLNTKIKTITVYYGKLAYREKSPK SSGDN" gene complement(<979458..>990320) /locus_tag="CRE_29770" /db_xref="WormBase:WBGene00059979" mRNA complement(join(<979458..979577,979627..980820, 980877..981052,981104..981173,981248..982051, 982104..982226,982273..982419,982466..982573, 982620..982703,983112..983213,983259..983679, 983725..984431,984481..984675,984725..987780, 987830..988545,988594..989633,989684..989782, 989827..990173,990221..>990320)) /locus_tag="CRE_29770" /product="hypothetical protein" /db_xref="WormBase:CRE29770" /db_xref="WormBase:WBGene00059979" CDS complement(join(979458..979577,979627..980820, 980877..981052,981104..981173,981248..982051, 982104..982226,982273..982419,982466..982573, 982620..982703,983112..983213,983259..983679, 983725..984431,984481..984675,984725..987780, 987830..988545,988594..989633,989684..989782, 989827..990173,990221..990320)) /locus_tag="CRE_29770" /note="contains similarity to Pfam domain PF06650 Protein of unknown function (DUF1162); contains similarity to Interpro domain IPR009543 (Vacuolar protein sorting-associated protein); coded for by the following C. remanei cDNAs: DT933516" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12519.1" /db_xref="InterPro:IPR009543" /db_xref="PFAM:PF06650" /db_xref="WormBase:CRE29770" /db_xref="WormBase:WBGene00059979" /translation="MVFESLVADLLNRFLGDFVDNLDSSQLNIGIWGGDVKLDNLQVK ETALDDFDLPIKLKYGYLSSLVLKIPWKNLYNEPVIATVDGLNLIVVPNKGVVYNEEK AAKNIQEIKQKTLARLEEARKERRKPKDPQADTFTEKMITQIIKNLQISVSNIHVRFE DRYTNRHRPFAMGVTLEKLNFKTTDENWKETIHKETVKIIYKLVSLQNLAVYWNSSAE FISDLDDKEAIRKRLQETIHNGKSPPEGFKYILEPIQMEAKLKLNQKPETDGSHWTIP KIDLAVDMHALALAIGKFQYQDILLFLEAQERFNAASQYLKYRPNLNEFKGHYKQWWR FAYTSILEEKVRRRRHNWSWDRMQKHRNLVRKYQKAWVRRQTEASPGAEVEATIKDAE KKLDVFNVNVARQQAELEIDRQGLTRQEDKPQGWVAWGKSWFGSGGGGPAPDKNKKGG KDIGSQFQEAMTPEEKAKLFEAIDYQENIPPTNYPKEFVENRFEFKLGQVAIVVDGAV SMQLLKLKASVEQRPSAGAMHVESSIQELRMDGCGSEVIRVRDPSVPWMYFLLDTNPL KGDYDQLVKLAIAPINVKYQAPAINNAIDVFKPPESVRLNQLTALAMSRYEEVKTRSV TGLAHAVEHRSRLVLDVQIQPARVYVSEGGIYDADKPTLLADMGLLSVVTVDTATVNT SGMDKLSALMEKAYDRFHVKLSNVVIAFAENVETAEGCVFEKESPLHVLKPTGLDIQI HKSSIDDLRLAKMRILGDLPDIVIGISDVRLIGLMKLALSIPTPKADEKTKAEKELEV VPEAKIKDRAKMRTIMEAEEMEEDVTQRDDGEDEDEKQKKKKTSEQQVQIELDLRLNQ IGVIVYRKDAVFCDVSILKMACKLQMRTFDMVVTAELGSIKVSMPEFSSLDSKREHLY LIDNDDHQGSLMTLKFVQANPESPFFATEYALTEQAVDFTFTKLVVSLHQQGVLELKA FGEALQSQLAELQKNTPEEDKVEETARKISRKLSDSVMSIASLSASSSTREKRQRKKT VGSSAAAELDTSRNIKQRIKASFGSLALNIGTQKSLETSLAIEHVSFSCYAKLYNFKH FQIHANVKITEKAMEVVATLRSISMKDRTTGAVYKKLLSVTGKEDMLRFDFVQYQRND EQRALMKSSEVDMVVKMRLAQMRFVFLNLWLARLMAWIAPFQNEAVRAAQAAQAAAAE RAATAAQNVKQIMEQSPPRIQLDVILEAPFIVVPRLSTSRDVIVLHLGRLALKNEIRG DSQYPKAIIDRMDIQMTDCSFGMGVMNEDVSAVSSSCMILKPISFKLALQRNLTFAAV KQLPEIVVDAHLHSIEAEMSDADYKTLMQTLSGNLAEGADLTVPPPPPPSSLESSNTT VAPTTPGKEKEKKDREANAGPPVVEKSHTRIVFQFVLDKISAVLYEGESVNGARNESD AFAALRLNNVKTSGKIGEDNSIIFAMSLDAFTMDDERKEKTKISKLMDKKGAKGDRFL DMSFNQDAEANKQIRLKMSAFFICLCPEFLGCLTRFFNVPQSEEQLEKEAVTSNVPTK ATSSASATSTGGVKTPAGPPQPVGTIAIDCDMHGVEVILVEDSMHPESTQALILSFNV TAASHPNEQTKDTKMNVAVENLTIFSSFYETKRRNEVTYQVLTPVKIEALVNMNTERK TTDAVLKMSAMDVKMSPSIIRLLSAVSAEFAKSSATGETGSVSQKIAKLRKWPNYFDA KAIDHRKYWFFAAPVAQEAVEVEEDATQEEKSRTDSMIGKENATVEIERISFTLEAGT GAIPVPLIFLDMLINAEAHDWSSAMRVSSGISLQMSYYNESVSVWEPIIEPVENEKGE YERWRLAMNMKSRNKQDSNDTSPQTEVKIEADKMLNVTVTKSLLSLLNKLSEAFATAA KQITPTQTRQLPGISPFVVLNETGIAVKVLDTETIRVSESGEPVDATHGDFIDVFLKN KKSKIEDRRLSIEQEEVTGDLKFELTGTVRETKIGRAEKRIIHLPKVSEGGHKWLIVA ETTIENNRRLVTLNSHVKFTNHLSYAVELYSKRDTTLDLFGTVEHGETIPLAVPLLFS PSGDIYLKPVDDKYEVSFESLCWHNFEHNKRQAVRCEADSTDGSFSGIYIDSVVHEEK IPDGVDDQTTSIFHVHLYPPLEFHNNLPFDINLELPEQKVLTAGTSTLLNVVAGSPVK AWLTYLGEKYVLEMPVPELKKDLEVVALNTETGSDELLLGLHWTSEYGDQKVYLYAPF WLVNNTDKMLRHVNDDAVPHGPNENPIILPFPAVDLSKKKKARVKIENESEWSEEFPL DTVGNAARITCKSAQNDFDLTVDIKLCQSGLTKIVTFAPFYLVSNLSKNPMEIREEGQ KKWIDIPAETCVGVWPEERKKRKLMCVRYKEEPEAESLLFPITENYETLCHMDGDSIG VEVSVSTGESSVAIHLSPFTPGMCPVQVMNNLTVPVTFGQKGHKKTSVGPNELAHFSW ASIVDAKVLEVDVGDWHFEDKLDQNRFGDLQVDKNVRRFSYYSNFLIGRQRVLLFTSD VDIAKAAYGSWETDIVDMQAEISLQGFGLSVVDNIVGREIIYMAISSSDILWEEEIKK GRFKPLAVKYMQALEEKYQAHLVTPNDEYESVEGFEVNVNRLILKKKKGKEVKIRRIF EQGLWASYGKSAQRTRLHAKINHIQVDNQLDACIFSRVLSVVPPPKSVIVDNTPKPFI ELSLLQRQPEFSSIAEIEYAHVLVQEFAVQVDQGLINALLLLISGEVARKPYGKEMFD EDLKICHVTLSETASTYRSQRPKSFYNDLHISPIMMHLSFSQGGTSGDAAASGASMPI QSEMINVLLRSVGVTLTELQDVVFKLAYFERKCVFYSPEQLNGEIISHYAKQFIKQVY VLVLGLDIIGNPFGLVRDLSAGVEDLFYQPFQGAIQGPEEFAAGVALGVQSMFGHAVG GAAGAVGRITGTVGKGVAALTFDDDYMKKRQEDLNRKPQSFGEGMARGLKGLGMGVVG GITGLVTKPIEGAKQEGGFGFVKGVGKGLIGVVTRPVSGVVDFASGTMNSVRAVAGTN REAGPLRPPRVLRADKIVRPYSSADAYGFKVFKDTDRGELAETDEFITYASISDKIVL IVTDRRLVLSKRTDMMGVWQTDWGTEYCKIKEPEFIPNGVKILLKEKKKGFLGIGSSE GKIITFQNAEKIHPKLAAAYKKATLA" gene <992563..>997225 /locus_tag="CRE_29563" /db_xref="WormBase:WBGene00059978" mRNA join(<992563..992609,992926..993048,993468..993561, 993611..993712,993760..993858,993909..994010, 994052..994153,994195..994296,994599..994700, 994742..994843,994903..995001,995049..995153, 995244..995470,996786..996883,996928..997066, 997117..>997225) /locus_tag="CRE_29563" /product="hypothetical protein" /db_xref="WormBase:CRE29563" /db_xref="WormBase:WBGene00059978" CDS join(992563..992609,992926..993048,993468..993561, 993611..993712,993760..993858,993909..994010, 994052..994153,994195..994296,994599..994700, 994742..994843,994903..995001,995049..995153, 995244..995470,996786..996883,996928..997066, 997117..997225) /locus_tag="CRE_29563" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PV98" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12631.1" /db_xref="WormBase:CRE29563" /db_xref="WormBase:WBGene00059978" /translation="MCSAVRDELWLLLLDERHKCDHVDADLGFGNGIEENQTEYGMQY PAKQAPRQAINFQERLARSRNATFLSDGDFDGTTINRQDYGVKKVARNAPFKFVDSGQ LDSGEFLADTTHKTDFQGKSVNRQNALRPTTNGLQSGEFEGYTTHKSDFDYKGDPRTG VIRGPQDAQLFSGPFNSTTTNRADFDKKQAERSGILKGPTSTNMFGGQFNGQTTNKAD YDQKQGERSGIMRGATGGQLFTGPFNGQTTNKSDYDLKQAERMGILRGPTSTEMFSGP FNGTTTNKADYDQKQGERSEILRGPTSTEMFSGPFNGTTTNKSDYDRKQADRQRPWAP TDGRLSAGPFYDTTTNRADFDRKQAGRPMPFRAADDSQLTSSSPFLVLSTNRADYVRK QGDRALPIRNTNDSSTLSIAAPFDGESTNHADFQRRQGEKSKMTRPHSSSNLLSSGTS KFDATTTTRADFIQKPHVRVINVKPRDDSFSGHVSRFDADTTYHDGFQEKSAEKLPLQ RTKDELTVGNGKFYGETTQHSDFIEKHVDICPAEKVLTRRDRSFEFKRTANGHRFYEQ RVTHGTIQPNRLVPVEA" gap 996249..996258 /estimated_length=10 gene <1001117..>1002919 /gene="Cre-tsp-15" /locus_tag="CRE_29564" /db_xref="WormBase:WBGene00059977" mRNA join(<1001117..1001200,1001611..1001802,1001867..1002052, 1002098..1002201,1002659..1002815,1002869..>1002919) /gene="Cre-tsp-15" /locus_tag="CRE_29564" /product="CRE-TSP-15 protein" /db_xref="WormBase:WBGene00059977" CDS join(1001117..1001200,1001611..1001802,1001867..1002052, 1002098..1002201,1002659..1002815,1002869..1002919) /gene="Cre-tsp-15" /locus_tag="CRE_29564" /note="contains similarity to Pfam domain PF00335 Tetraspanin family; contains similarity to Interpro domain IPR000301 (CD9/CD37/CD63 antigen)" /codon_start=1 /product="CRE-TSP-15 protein" /protein_id="EFP12326.1" /db_xref="InterPro:IPR000301" /db_xref="PFAM:PF00335" /db_xref="WormBase:CRE29564" /db_xref="WormBase:WBGene00059977" /translation="MGAFGNSAYGARGRLVKFSYIVTALISILFSISCICYGIWLLAR RSQYAELVSPSLYVDVGRILVIISILSIANYLICFYAIFKEMRCIVTSCAVASIVIAV MLIIGGLIGLNFRDQLTHYTPLNLKMLTSLRELYGTHDMKGITESWDALQSNFKCCGV NGTDDAQIWKTSKWYMHQKAPKALIPESCCIPSEIEECRTNPFGSATPPYYTKTCYEP LQNDLLHVMNVASWLCITNAIVQIIPSIASCWYSRLIRK" gene complement(<1003443..>1014012) /locus_tag="CRE_29771" /db_xref="WormBase:WBGene00059976" mRNA complement(join(<1003443..1003512,1003717..1003771, 1003912..1004136,1004183..1005242,1005420..1005889, 1006091..1006221,1006755..1006835,1011918..1012117, 1012167..1012305,1012948..1013149,1013194..1013305, 1013351..1013467,1013686..1013847,1013899..>1014012)) /locus_tag="CRE_29771" /product="hypothetical protein" /db_xref="WormBase:CRE29771" /db_xref="WormBase:WBGene00059976" CDS complement(join(1003443..1003512,1003717..1003771, 1003912..1004136,1004183..1005242,1005420..1005889, 1006091..1006221,1006755..1006835,1011918..1012117, 1012167..1012305,1012948..1013149,1013194..1013305, 1013351..1013467,1013686..1013847,1013899..1014012)) /locus_tag="CRE_29771" /note="contains similarity to Pfam domains PF00047 (Immunoglobulin domain), PF00090 (Thrombospondin type 1 domain) (4)contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR000884 (Thrombospondin, type I), IPR010909 (PLAC), IPR013783 (Immunoglobulin-like fold), IPR013273 (Peptidase M12B, ADAM-TS), IPR007110 (Immunoglobulin-like), IPR003599 (Immunoglobulin subtype), IPR013151 (Immunoglobulin); coded for by the following C. remanei cDNAs: DY524715" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12368.1" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR010909" /db_xref="InterPro:IPR013151" /db_xref="InterPro:IPR013273" /db_xref="InterPro:IPR013783" /db_xref="PFAM:PF00047" /db_xref="PFAM:PF00090" /db_xref="WormBase:CRE29771" /db_xref="WormBase:WBGene00059976" /translation="MECFHFVVFLLFHLLLASFHVDALSWAAWSPWSSCTKTCGGGVS RQLRRCLTSKCSGESVRFKVCAQKTCESKSRLARDTICGGEEIVSRQQCEVVCRSRVT RANFLWRVDDGTPCQAATSRAVCSKGACQIVGCDGLIGSSFRFDACGVCGGRGDTCDN GKFIWKVSEEYTACASNCDDIVDWSGAGRSIASTSQPIVVCVNAISGRVVPERLCADK LRPKVEARPCPMLICPSRWMAADWSECIPHCGSGARKREVYCVQTAHNVTVHVPDSFC ENGTRPIGEENCISTSCGRWEAGKWSKCTASCGQGVRRRHVACVGGSDCDEGGRPRQE TTCYAGIPCSLATNSLDWNDRAYLDGNTFGSMDNHNDWQAPRLVAGEWSTCSSTCGTG VMSRTVECVAVNPISSAPIKLPMSECQDQEQPKLFESCEVRSCPLQEDSKLTEDEAPN QWRYGDWTQCSASCLGGKQKAALKCIQVATGKSVQWSQCDARRRPPEKSRPCNQHPCP PFWLTSKYSECSVSCGSGTARRSVKCAQTVSKTDGADAHIVLRDDRCHFKKPQETETC NVIACPPTWVTAQWTECSRSCDSGERRRQVWCEIRDSRGKTQRRPDVECDANTKPQSV EVCSFGSCARPELLTNRVFEQNVEQKKLTLGIGGVATLYQGTSIKIKCPAKKFDKKKI YWKKNGKRIKNDAHIKVSANGNLRVFHARMEDAGVYECFTDRLQGNVTLNFKYRDFPA TRPDLSPKVQLPSNRNKQRPPTEASREDVIREQANVLHKMNVSLIEALLTAPNDEKAR EQLKKYGNELVARWDIGHWSECRQKTCHVAGYQARGLSCKVTFHGETRNVDNSICESL ASVRPPETRPCHREDCPRWEASQWSECSSQRCVSSMLAQKRRNVTCRFTNETTVDIQH CDITNRPATTMDCPNQNCKAEWRTSDWGSCSSECGTGGVQLRLLSCVWISSGRPAGRN CEQMRRPHSARACVADEPLPPCMPTASALYQRDASCQDQSRFCDIIKLFHSCDSMEVR QKCCSTCTFVERKKF" gene complement(<1017265..>1017547) /gene="Cre-fip-6" /locus_tag="CRE_29772" /db_xref="WormBase:WBGene00059975" mRNA complement(join(<1017265..1017437,1017493..>1017547)) /gene="Cre-fip-6" /locus_tag="CRE_29772" /product="CRE-FIP-6 protein" /db_xref="WormBase:WBGene00059975" CDS complement(join(1017265..1017437,1017493..1017547)) /gene="Cre-fip-6" /locus_tag="CRE_29772" /note="contains similarity to Mus musculus Transcription factor MafA (V-maf musculoaponeurotic fibrosarcomasoncogene homolog A) (Pancreatic beta-cell-specific transcriptionalsactivator).; SW:Q8CF90" /codon_start=1 /product="CRE-FIP-6 protein" /protein_id="EFP12592.1" /db_xref="WormBase:CRE29772" /db_xref="WormBase:WBGene00059975" /translation="MINQQRIFVLLIVLVLAVVTYAHHSHSYSHSHEHHHHHHHGGYY GGGYGGGYQPYGYGNNGYNGYYQQNYWGRRK" gene complement(<1019032..>1020326) /locus_tag="CRE_29773" /db_xref="WormBase:WBGene00059974" mRNA complement(join(<1019032..1019118,1019169..1019942, 1020102..>1020326)) /locus_tag="CRE_29773" /product="hypothetical protein" /db_xref="WormBase:CRE29773" /db_xref="WormBase:WBGene00059974" CDS complement(join(1019032..1019118,1019169..1019942, 1020102..1020326)) /locus_tag="CRE_29773" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR014030 (Beta-ketoacyl synthase, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12503.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="InterPro:IPR014030" /db_xref="PFAM:PF00635" /db_xref="WormBase:CRE29773" /db_xref="WormBase:WBGene00059974" /translation="MSVIIKVGINQQKASVRSYEGRRESCASGARTRMLVPLTAIVTT SLPMAAAIAFCAKDRKTVIQQFWKNHCKSETTHAKNKNKSTKSTRSSKSAKGSKSGKS SRSHRSKSQRSKRSSKSGKKGKSSKSSKKGKSGKSGKSSKSKKAVKGAATSSASAASG TSASEKSTRSTKSSRKSSKSSKSRKARRLDSDAQNKMEKSGKSSKIAAACAAAPKVVR NDKKCVFTIVICQQSTGGTQAAKSLVEEVNAIKHSNQLSVAPAKLQYQTLGGVSQVEL KNTSGERKAYKVKCSDNALYRVNPVFGFAEPHSSVKIDVLRLNGEQKTDKLVLLTANA KDSSDPHEAFAKQAEHHEMMVVPLVAS" gene <1020460..>1021980 /locus_tag="CRE_29565" /db_xref="WormBase:WBGene00059973" mRNA join(<1020460..1020517,1020563..1020676,1021015..1021316, 1021361..1021441,1021483..1021619,1021665..1021800, 1021855..>1021980) /locus_tag="CRE_29565" /product="hypothetical protein" /db_xref="WormBase:CRE29565" /db_xref="WormBase:WBGene00059973" CDS join(1020460..1020517,1020563..1020676,1021015..1021316, 1021361..1021441,1021483..1021619,1021665..1021800, 1021855..1021980) /locus_tag="CRE_29565" /note="contains similarity to Pfam domain PF00300 Phosphoglycerate mutase family; contains similarity to Interpro domain IPR013078 (Phosphoglycerate mutase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12537.1" /db_xref="InterPro:IPR013078" /db_xref="PFAM:PF00300" /db_xref="WormBase:CRE29565" /db_xref="WormBase:WBGene00059973" /translation="MIGAPLKPLEENGKRRDSTSSIDASTCTVQETMASGDNFLAGLS RVEQPARQLTIVTMSHAEHMGLIFPNWVRLCYRRGPMEYTPYDMNMPPKLVPRPPLHY KFDPPLTERGHIVAETYGRGLISHGVRPYEIFCSPDMKSVQTAAGVVKGLGLSFTSIN IEPALMSYRQMLPARYHEMLLSPKTFFGLGYPINTQYIPLRGGIVPSENIESYNFRIQ SFFNERIAKIEQKYVIVISDNVMVDISQNIRIDTVDDILKSTRKHTCQRNFISLQKGE AHLLQDPVMPLTKSLYCVKPFYWSEVPLKLSVPNHPELNQN" gene complement(1020697..1020770) /locus_tag="CRE_31885" /db_xref="WormBase:WBGene00186293" tRNA complement(1020697..1020770) /locus_tag="CRE_31885" /product="tRNA-Ile" /db_xref="WormBase:CRE31885" /db_xref="WormBase:WBGene00186293" gene 1020900..1020972 /locus_tag="CRE_31805" /db_xref="WormBase:WBGene00186213" tRNA 1020900..1020972 /locus_tag="CRE_31805" /product="tRNA-Lys" /db_xref="WormBase:CRE31805" /db_xref="WormBase:WBGene00186213" gene complement(<1022194..>1025085) /gene="Cre-cutl-7" /locus_tag="CRE_29774" /db_xref="WormBase:WBGene00059972" mRNA complement(join(<1022194..1022390,1022597..1023335, 1023391..1023487,1023958..1024045,1024093..1024232, 1024283..1024728,1025062..>1025085)) /gene="Cre-cutl-7" /locus_tag="CRE_29774" /product="CRE-CUTL-7 protein" /db_xref="WormBase:WBGene00059972" CDS complement(join(1022194..1022390,1022597..1023335, 1023391..1023487,1023958..1024045,1024093..1024232, 1024283..1024728,1025062..1025085)) /gene="Cre-cutl-7" /locus_tag="CRE_29774" /note="contains similarity to Pfam domain PF00100 Zona pellucida-like domain; contains similarity to Interpro domain IPR001507 (Endoglin/CD105 antigen)" /codon_start=1 /product="CRE-CUTL-7 protein" /protein_id="EFP12421.1" /db_xref="InterPro:IPR001507" /db_xref="PFAM:PF00100" /db_xref="WormBase:CRE29774" /db_xref="WormBase:WBGene00059972" /translation="MWWHFFLKFLLFLYCSTAISSFEIQNGVVGKPDVFCGIDTIRVK VNTEHPFNGKSFPRILDFKLPSLGRIYVDGESDKQHCVQHSADAHSSPQEFTIPIGAC NMRRQRTLHPRGISFSFTMITSFHPFFVTGMDRAFSIRCFFLESIKGLNTEIDVGTLA PQHVDQEYSLPVCAYHLKDGIEGHVLRFAQVGQKVTHVWRCDQDASHVYGILIHSCYA DDGHGNKFELVDDRGCSTDPFLLPQIEYESGAISAYTNAHVFKYADKVQLYFTCTVQL CYKHDGGCEGITPPQCSGHSHGIHPPRVAGGVPSGHKFVNLGNDNHADNHHSENDLSA EAQFHEHESTPRVPGYIKPDAFQPIILGPPHPTVFHKNGPGGPPPHHVPPFKGPKDIQ RISEEEDTPNPYRRDSPLNDTTEDDIVMQVVTLRTTVPTVSHLPPDLVTFKPIVTGTT GKMNMNNEDEEVEELITPRVFGGGSTLPTSSSTKVRRTAGEMETDVSVDVIVLPVEDK ERKDTNSPPQSLSFQSASEVCLSKTSTVIFSTAILLALFCCVTVTFLVTRQRNRQLLH HASKRRIDNF" gene complement(<1025732..>1027442) /locus_tag="CRE_29775" /db_xref="WormBase:WBGene00059971" mRNA complement(join(<1025732..1025930,1025977..1026101, 1026152..1026319,1026366..1026555,1026933..1027030, 1027082..1027291,1027341..>1027442)) /locus_tag="CRE_29775" /product="hypothetical protein" /db_xref="WormBase:CRE29775" /db_xref="WormBase:WBGene00059971" CDS complement(join(1025732..1025930,1025977..1026101, 1026152..1026319,1026366..1026555,1026933..1027030, 1027082..1027291,1027341..1027442)) /locus_tag="CRE_29775" /note="contains similarity to Pfam domain PF03314 Protein of unknown function, DUF273; contains similarity to Interpro domain IPR004988 (Protein of unknown function DUF273)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12338.1" /db_xref="InterPro:IPR004988" /db_xref="PFAM:PF03314" /db_xref="WormBase:CRE29775" /db_xref="WormBase:WBGene00059971" /translation="MRRTQFRIKHSALFFGLLFTVCFVSHIIFEDIHRDPKTEKFRIS RASTHRHLNISVVMVVSNIKGAEKEYTTALRSMRCYCKMHNYAFRLVEDDDFRGVCDQ KDFMFRRHCIVAELLEKSDWLVFLDADIAVVNPHVLLEEYINPLYDLTFYDRFVNWEV AAGSYIVHNTPWAKAFLRKFADFESNLPNSFHGTDNGALHIYLQQTFYPQLSDESQIC KKIWEKAENYRDLFTFEACIRTVMGDVHEFDRARILKKGTGWVRDIWLTDSKWNPERD FMLHGLKDTHEVFLSQGFLVNTIFGQFNWRSPFSSKLKLEQCGSPDFWKMNKNLIVSK KEIERDLRKEFDEVERRRWESLSAVAGYI" gene <1029686..>1030495 /locus_tag="CRE_29566" /db_xref="WormBase:WBGene00059970" mRNA <1029686..>1030495 /locus_tag="CRE_29566" /product="hypothetical protein" /db_xref="WormBase:CRE29566" /db_xref="WormBase:WBGene00059970" CDS 1029686..1030495 /locus_tag="CRE_29566" /note="contains similarity to Pfam domain PF02544 3-oxo-5-alpha-steroid 4-dehydrogenase; contains similarity to Interpro domains IPR001104 (3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal), IPR016636 (3-oxo-5-alpha-steroid 4-dehydrogenase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12407.1" /db_xref="InterPro:IPR001104" /db_xref="InterPro:IPR016636" /db_xref="PFAM:PF02544" /db_xref="WormBase:CRE29566" /db_xref="WormBase:WBGene00059970" /translation="MLFAIIIVGSWLMTTCGIFVFLTLSNTGKQAEYGRYSNPSTSGW TFPANFAWAVQEAPAFFIPFYFYWTDQHLTEFGQFLTCLMMFHYAYRSFIYPFLLNSK NRTPAKIVLMAFAFCTWNGFIQGSWNAYYQPEFDKIHPRFFVFFGVWLFVVSLSLAFS QKYHFFQIGFIIHFISDLHLISLRRNNPAGSYGIPRGHLFEYISCPNYFGECLQWIGY AIAARSFPAIAFAFFTVCNLAPRAMSHHKWYKEKFEEKYPNDRMALVPKLW" gene <1030744..>1034073 /gene="Cre-gei-11" /locus_tag="CRE_29567" /db_xref="WormBase:WBGene00059969" mRNA join(<1030744..1030806,1030886..1031488,1031538..1031764, 1031811..1032000,1032048..1032332,1032380..1032505, 1032558..1032799,1032844..1032913,1032961..1033185, 1033233..1033553,1033600..1033806,1033856..1033936, 1033984..>1034073) /gene="Cre-gei-11" /locus_tag="CRE_29567" /product="CRE-GEI-11 protein" /db_xref="WormBase:WBGene00059969" CDS join(1030744..1030806,1030886..1031488,1031538..1031764, 1031811..1032000,1032048..1032332,1032380..1032505, 1032558..1032799,1032844..1032913,1032961..1033185, 1033233..1033553,1033600..1033806,1033856..1033936, 1033984..1034073) /gene="Cre-gei-11" /locus_tag="CRE_29567" /note="contains similarity to Pfam domain PF00249 Myb-like DNA-binding domain; contains similarity to Interpro domains IPR001005 (SANT, DNA-binding), IPR012287 (Homeodomain-related), IPR014778 (Myb, DNA-binding), IPR015495 (Myb transcription factor)" /codon_start=1 /product="CRE-GEI-11 protein" /protein_id="EFP12318.1" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR014778" /db_xref="InterPro:IPR015495" /db_xref="PFAM:PF00249" /db_xref="WormBase:CRE29567" /db_xref="WormBase:WBGene00059969" /translation="MFGPFDEGAGPSSSYNPPILEEEVETPDDEIRCNSIEELLIFNE TYSEILDVSIQLIEQQLADNRQRQNQLKEEYRLYNRADITKRKVPVHLYMPPYFKDEN NMCPPMSAEAREKQELKWFDPLMREEKKWTPSEIRTLRDAVKEAMVSHQVQPLCSRRD IIVGKLRVADITTTNNERRQWTMELEDLMRKISYIKAKTDEEVLTASADYSVIPWNAI ANVDFKGTRTEWAVKSKWCNELNPKWNKDAWTSDELDKLKELRESPKFVSWQLLALSL GTRRTSYQCMEKYKTEISQHSKEWTQDEDTKLIALTKLTSINGLIQWDKVAQFMPGRT RQQVRTRFSHTLDSSVKHGRWTDQEDMLLISAVSRYGAKDWAKVAQAVQNRNDSQCRE RWTNVLNRSAHVNERFTLAEDEQLLYAVKVFGKGNWAKCQMLLPKKTPKQLRRRYLQL IAAKLRLAAGFCNAVDAMKSGRRAPEEDELDEEDRQEAEKIPNELMKEIYEKLAKDNP DVEESPEEFYKRINEMEIPAAARIRVLKNNPCYKTVENHINSIVKKHKDMEEVDKELK SSQILQSLKLCETDIRYMIEKSKTLARYYMARRYQKNVDQIGCRVRPINIKMEPGIKP TINPEDTEEEKRMLIVESLCSAIRQHDMVDWGKKFWTDHRFDASRTAKRFAEKMLCKK SDEVAEWSLRVGSNDCDSSDIHCPPKATLPPTPASFDMTKMIQRARAGLNRLSAEHFY PLDVGLDQQPKFTNFDREKLDENRRMNIGLSSDITNSTAYAKFYARMRTVLLEPMRLQ MARESSTEETKRLALCLAEERAHEEEEVAVHNRLRPQMPGTSSTVTPTSIARVLNNGM KIDTADILDKDTSEKVDMKRKIKATIDQVAKKPCRITPAPSHISINSESTDMS" gene <1034375..>1035041 /gene="Cre-mdt-31" /locus_tag="CRE_29568" /db_xref="WormBase:WBGene00059968" mRNA join(<1034375..1034465,1034548..>1035041) /gene="Cre-mdt-31" /locus_tag="CRE_29568" /product="CRE-MDT-31 protein" /db_xref="WormBase:WBGene00059968" CDS join(1034375..1034465,1034548..1035041) /gene="Cre-mdt-31" /locus_tag="CRE_29568" /note="contains similarity to Pfam domain PF05669 SOH1; contains similarity to Interpro domain IPR008831 (SOH1)" /codon_start=1 /product="CRE-MDT-31 protein" /protein_id="EFP12464.1" /db_xref="InterPro:IPR008831" /db_xref="PFAM:PF05669" /db_xref="WormBase:CRE29568" /db_xref="WormBase:WBGene00059968" /translation="MQMETTESEKTRFEVECEFVQALGNPNYLNFLAQRGYFKEEYFV NYLKYLLYWKKPEYARCLKFPQCLHMLEALQSQQFRDAMAYGNDFYQITFCSTFLSGP SAKFVEDQVVLQWQFYLRKRHRLCMMPEEEGQELVDSEEEVEQPSEEKDTEEDTDEEE EAKNTKVTEGTEEKEATEETQPDAEMADAAESTS" gene complement(<1035258..>1038159) /gene="Cre-spd-2" /locus_tag="CRE_29776" /db_xref="WormBase:WBGene00059967" mRNA complement(join(<1035258..1035582,1035635..1035937, 1035988..1036133,1036178..1036895,1036945..1037242, 1037288..1037683,1037784..1038023,1038069..>1038159)) /gene="Cre-spd-2" /locus_tag="CRE_29776" /product="CRE-SPD-2 protein" /db_xref="WormBase:WBGene00059967" CDS complement(join(1035258..1035582,1035635..1035937, 1035988..1036133,1036178..1036895,1036945..1037242, 1037288..1037683,1037784..1038023,1038069..1038159)) /gene="Cre-spd-2" /locus_tag="CRE_29776" /note="contains similarity to Saccharomyces cerevisiae Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth; SGD:YJR151C; coded for by the following C. remanei cDNAs: DT936401" /codon_start=1 /product="CRE-SPD-2 protein" /protein_id="EFP12688.1" /db_xref="WormBase:CRE29776" /db_xref="WormBase:WBGene00059967" /translation="MDEEVPMDLVDDQFDDVSIEDAPLEDVESFYNPDGYVDCEEDDV VPTNEHFRAENRYKPSLRTPRELPTIREENREDIRSNTSSRVTTRPPSVLSDKSNDLS SQFGFQSGGNAIDQYTDKFFADDNRAERLFPESELINKFASPARDKQNSWEPSVCHYE KQPTPEVQNNSPGLIFANLSSKKDPFAQRKQDVSRVGKASAEKVNNENEPTSRRISPE RNIFTTSPMNSTKFLEEKTSTPKRPGGNRIGQRGLPSLEFSTIYEYSPQRASGTPRNY QTRHPTNPITPNTATTSDTLLSYRTINDSIVAKVLSGDNTDKNLLDALEEIRKKRQNQ PSKPNFVLSTKGAKPQFSQQKTSTTQSSVSNKQSTSNSSFNGTSASQSVSNYRKSQES QRNGATTAELNNSNTTNFTSNSSRLSTAKNDRSSRQRGGFSDSSVSTVVPISNSTTTI QNSRGGRDSVSSVRTISRASSTMTVGGSYAQTSSGTMKPLKIHATRIAFGVVPQNETL TIEIEIENISERPCQVRSTIDSAKSEVQILDNKMAMIDPKKSTKLRVAFTPTLIGRYN MFLKVEVPAQNFTQSIPIWGYGGFAKITPFSETDLRPTDNASEFVMKASNMKRITFKL NNSGNRTGFALMTVYDSAMRPVPNDFVNFYPARGVVVHRQCDKRVEVRIDTSYLGHYD ELSNHRTSSAMSTASTSSMASCRKRAIPGTDFVVQVAWGEETIRERLRLLEIRTGRHQ IIDGQDFTSHQFADEKAAVHPAGCPTIIDEDADLFASSYNTFFINIFPSPSGLKAFQA ASVHLPKATNSDVTVLETSAFRQNTFVSDATMMSRQTKRM" gene <1038408..>1039070 /locus_tag="CRE_29569" /db_xref="WormBase:WBGene00059966" mRNA join(<1038408..1038484,1038537..1038750,1038804..1038912, 1038958..>1039070) /locus_tag="CRE_29569" /product="hypothetical protein" /db_xref="WormBase:CRE29569" /db_xref="WormBase:WBGene00059966" CDS join(1038408..1038484,1038537..1038750,1038804..1038912, 1038958..1039070) /locus_tag="CRE_29569" /note="coded for by the following C. remanei cDNAs: DT934951" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12337.1" /db_xref="WormBase:CRE29569" /db_xref="WormBase:WBGene00059966" /translation="MTDIDERLGRANSHPRFLPVDQQAVNDPLSKLISDYELSQAYHD RELLDLIQKVERNNPERCSKAPKFVSRLLTHKSAPIRKSAFAACITILSFPQSPRRMM LDAYRMALCNSNYQVAQYALSLLPQFVDVCPEEANNLIKCGAAAYNKLPAPSTDIEMY LSRAYTKASQ" gene <1039238..>1040412 /gene="Cre-thoc-3" /locus_tag="CRE_29570" /db_xref="WormBase:WBGene00059965" mRNA join(<1039238..1039525,1039576..1039794,1039841..1040112, 1040163..>1040412) /gene="Cre-thoc-3" /locus_tag="CRE_29570" /product="CRE-THOC-3 protein" /db_xref="WormBase:WBGene00059965" CDS join(1039238..1039525,1039576..1039794,1039841..1040112, 1040163..1040412) /gene="Cre-thoc-3" /locus_tag="CRE_29570" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat; contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR015943 (WD40/YVTN repeat-like); coded for by the following C. remanei cDNAs: DR407434" /codon_start=1 /product="CRE-THOC-3 protein" /protein_id="EFP12627.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR015943" /db_xref="PFAM:PF00400" /db_xref="WormBase:CRE29570" /db_xref="WormBase:WBGene00059965" /translation="MFFFNFYLILKMTISSRERRCARLLTQADAISYFEKYKRVRTTD MKVQQCQSVAFNCDGTKLVCGAFDKKVSVANVDGGRLRFSWVGSSHTSSVEQVACSEK QPNMFASASADRNICVWDIRQSKPTHRISNKVGNFFISWSPCDQYFIFLDKDNRVNTV DIRSYQVVNTHDMKTFSHELTFHPLSNHVFVAESGGKVEILKFTGGALEPVTTIQAHS HQVDCLALSISKDGQKLAVGASDASCSLWDLDELICEKVIPRHDYGIRTVSFSCNGQL LASGSEDHSIDIAYVPDGSRCYEIKHTGETYSVAWHPTSLLLAYTASDGMDGRESTLV KTFGHSTV" gene complement(<1040555..>1041094) /locus_tag="CRE_29777" /db_xref="WormBase:WBGene00059964" mRNA complement(<1040555..>1041094) /locus_tag="CRE_29777" /product="hypothetical protein" /db_xref="WormBase:CRE29777" /db_xref="WormBase:WBGene00059964" CDS complement(1040555..1041094) /locus_tag="CRE_29777" /note="contains similarity to Saccharomyces cerevisiae Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; appears to have distinct and also overlapping functions with Tpm1p; SGD:YIL138C" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12575.1" /db_xref="WormBase:CRE29777" /db_xref="WormBase:WBGene00059964" /translation="MSVTVTTFKCEELEPDYQSTMIDYMQETIDSLKNNNKELEDKNQ ELQNHLHSLSNRNVEEIIEENKMLLEKNKELSEKWKNVLLLRAQQKRYSQLIFKNEHL EKSVEFLNLKSKSDEKFKDECLNKIIGVEEAKKELEKKHQEEVSWLKEEIKIWKSDLS NEEKQKLIAELFGNKGSAV" gene <1043058..>1045544 /locus_tag="CRE_29571" /db_xref="WormBase:WBGene00059963" mRNA join(<1043058..1043120,1043282..1043355,1043404..1043617, 1043632..1043736,1043787..1043953,1044000..1044140, 1044187..1044286,1044335..1044451,1044499..1044623, 1044673..1044803,1044849..1044985,1045031..1045200, 1045248..1045343,1045391..>1045544) /locus_tag="CRE_29571" /product="hypothetical protein" /db_xref="WormBase:CRE29571" /db_xref="WormBase:WBGene00059963" CDS join(1043058..1043120,1043282..1043355,1043404..1043617, 1043632..1043736,1043787..1043953,1044000..1044140, 1044187..1044286,1044335..1044451,1044499..1044623, 1044673..1044803,1044849..1044985,1045031..1045200, 1045248..1045343,1045391..1045544) /locus_tag="CRE_29571" /note="contains similarity to Pfam domain PF05699 hAT family dimerisation domain; contains similarity to Interpro domain IPR008906 (HAT dimerisation)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12430.1" /db_xref="InterPro:IPR008906" /db_xref="PFAM:PF05699" /db_xref="WormBase:CRE29571" /db_xref="WormBase:WBGene00059963" /translation="MSKNELTSVAWSFFLKVDDEKKQLRVRASRGNPAVNYEEATENL IMAICTSGASFQLLKNSWFRKFCRILDPNFTLPTPDAARKVISKHATSYITNTMEQLS AVDVRSFARRCNSVNKFFISFDSWEDKYENFSIYVVFLYYTDDQYNKRKVLLGIRNIA GKVTSENIEELATGLLIEYNLDFSKIMGTITDERSNLQGFLNTNVYHQVLCAAEALSH IVNAASEIPLLVEVMNKVNGLVSHLSRSKSERTRFRESSSSLRIESRLPLPFRTDRPG RCISFARAFLTHYESIKSLTRGQEFILSEQEKENLEIFVQCATPYLEAINQVESDKTF CSEVLIHFASLSDFLNNQRHNHPVVKVLTEETVHQFQRFLENDIALLTTFVDPRLSYT DGVLLQKSWKDVEKLVESYCADNYRLINASNDQNPEPAAKRKRPSDTHFSKFIESLTQ STVPGSIETEIVNYKASVLTYRVALDSCPLQYWRMNQSRFPTLCRLAKDVLSAPQSSI QAERYFSECSEVVSSSTRNRHSALSLNETLLNSALGIIKRMDTDPKWNEDEESDGESD EEPDAADNFNAWDRSVDPTNYELSAVKEENF" gene <1045828..>1047891 /locus_tag="CRE_29572" /db_xref="WormBase:WBGene00059962" mRNA join(<1045828..1045863,1045937..1046104,1046156..1046281, 1046325..1046462,1046507..1046752,1046863..1047036, 1047086..1047176,1047225..1047298,1047342..1047575, 1047766..>1047891) /locus_tag="CRE_29572" /product="hypothetical protein" /db_xref="WormBase:CRE29572" /db_xref="WormBase:WBGene00059962" CDS join(1045828..1045863,1045937..1046104,1046156..1046281, 1046325..1046462,1046507..1046752,1046863..1047036, 1047086..1047176,1047225..1047298,1047342..1047575, 1047766..1047891) /locus_tag="CRE_29572" /note="contains similarity to Pfam domain PF00514 Armadillo/beta-catenin-like repeat; contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR000225 (Armadillo)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12323.1" /db_xref="InterPro:IPR000225" /db_xref="InterPro:IPR011989" /db_xref="PFAM:PF00514" /db_xref="WormBase:CRE29572" /db_xref="WormBase:WBGene00059962" /translation="MVKSSKKEKNETATPPESDTFNINLFVTMLESSCRIQVSTALYF FRKAFASIHDGSDILIRDQFYARIKNGVLNALRSEILDVDGEINAVWIITNMCCISKE VTHLFVNSNVLEVLTQLIRSSNPRLSNQSVWAIANISADCVSCKTMCRRPKLLKILSK MLQNSHQLEDTERRQLIWCINNILTGGRATMLAPVARSFIRTFSNLILDTEVIQRMNC APMVLWTLANLVDITHDTTRIDMLQSQTNLVEHVILLFLDENEKQSHAAALRLLGNIA VGSDTQTDHLLTKINFRYVLHRAMSTPEHHCEVAWIYSNIVAGAVRHVDFVLEDSDRF YGWLLSGINSDIPRFRKESLWIVGNLLATADEYQRSQLVEFGIINHLPDLLKYDDGRL NEKGAVTATELLREHPWQYRLYKDLDILGCIDALGPQYSTQKAELQMLLNELEPPKRM EKHPECRVVCYSKLPNDSSI" gene complement(<1048508..>1057900) /gene="Cre-fasn-1" /locus_tag="CRE_29778" /db_xref="WormBase:WBGene00059961" mRNA complement(join(<1048508..1048603,1048688..1048808, 1048858..1049120,1049177..1050215,1050266..1053662, 1053711..1053882,1053929..1055306,1055415..1056154, 1056207..1056457,1057540..1057775,1057830..>1057900)) /gene="Cre-fasn-1" /locus_tag="CRE_29778" /product="CRE-FASN-1 protein" /db_xref="WormBase:WBGene00059961" CDS complement(join(1048508..1048603,1048688..1048808, 1048858..1049120,1049177..1050215,1050266..1053662, 1053711..1053882,1053929..1055306,1055415..1056154, 1056207..1056457,1057540..1057775,1057830..1057900)) /gene="Cre-fasn-1" /locus_tag="CRE_29778" /note="contains similarity to Pfam domains PF02801 (Beta-ketoacyl synthase, C-terminal domain), PF00106 (short chain dehydrogenase), PF00109 (Beta-ketoacyl synthase, N-terminal domain), PF00975 (Thioesterase domain), PF00550 (Phosphopantetheine attachment site), PF00107 (Zinc-binding dehydrogenase), PF00698 (Acyl transferase domain); contains similarity to Interpro domains IPR006163 (Phosphopantetheine-binding), IPR013149 (Alcohol dehydrogenase, zinc-binding), IPR016038 (Thiolase-like, subgroup), IPR000794 (Beta-ketoacyl synthase), IPR014031 (Beta-ketoacyl synthase, C-terminal), IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site), IPR014043 (Acyl transferase), IPR014030 (Beta-ketoacyl synthase, N-terminal), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding), IPR009081 (Acyl carrier protein-like), IPR001227 (Acyl transferase region), IPR001031 (Thioesterase); coded for by the following C. remanei cDNAs: DT935707, DR776467, DR409697, DT936748" /codon_start=1 /product="CRE-FASN-1 protein" /protein_id="EFP12374.1" /db_xref="InterPro:IPR000794" /db_xref="InterPro:IPR001031" /db_xref="InterPro:IPR001227" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR003006" /db_xref="InterPro:IPR006163" /db_xref="InterPro:IPR009081" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR014030" /db_xref="InterPro:IPR014031" /db_xref="InterPro:IPR014043" /db_xref="InterPro:IPR016038" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF00106" /db_xref="PFAM:PF00107" /db_xref="PFAM:PF00109" /db_xref="PFAM:PF00550" /db_xref="PFAM:PF00698" /db_xref="PFAM:PF00975" /db_xref="PFAM:PF02801" /db_xref="WormBase:CRE29778" /db_xref="WormBase:WBGene00059961" /translation="MESNSWWQKQDDIVISGVSGRFPRCDNVKEFGDLLLAGEDLVTE DDLRWPPGFYDLPKRHGKLKELKKFDAGFFQVTPKQANFMDPQVRILLEASWEAMVDA GINPIDLRGSKTGVFVGCSASETSGALTQDPESVTGYTLTGCVRSMFSNRISYTFDLQ GPSFSVDTACSSSLLALQLAIDSIRQGQCDAALVAGAHLTLTPTAALQFLRLGMLTDK GSCRSFDDSGDGYCRTEGVAAIFIQRKKKAQRIYATVLHAKSNTDGYKEQGITFPSGE RQAQLLQEVYSEAGVDPNSVYYVESHGTGTKVGDPQEANAICQVFCSNRSDSLLIGSV KSNMGHAEPASGVCSLTKILLAIERQMIPPNLHYNTPNQYIPGLVDGRLKVVTEPTPL PGGVIGVNSFGFGGSNTHVILRAADHVAPAIHQHPFTKIVTYCGRTQESVEKMFAEIE ANKENLYLQALLANQANMPANLLPFRGYMLLDRENAQSPMKNITKVPITEPRPIYFIY SGMGSQWPGMAIKLMKIPMFDESLRASSKTLDEYGLDVYGMLCNPDPEQYSNNTMNCM LAITAIQIALTDTLTALGVSPDGIIGHSTGEMGCGYADGGITREQTMRLAYYRGTTIM NHTEIKGAMAAVGLTWEEVKAQAPKGVVAACHNGADSVTISGDAEGVATFCAQLKEKD IFAKVVDTSGIPFHSPAMLAVKDEMIESMRTAVPEPKPRSSKWISTSIPEEDWESDLA ATCSAEYHVHNACSPVLFYEALQKIPANAVTIEMAPHSLMQAILRRSLMKTVTNVGLM NKPKSENDDELESFLGSLGKIYQAGVNIQISELYPGGQYKGVVPKGTPMIGPMWQWDH SQDWQTIDGRHMVAGGGGSIPASATYNIDPFAADSKEAYLLDHCIDGRVLYPFTGHMV LAWKTLCKLKSLDFQKTPVVFENINVYSATIVTKPIKLDVVLSPGNGYFEIISDEQVA ASGRIYVPEDNQPFYYGKLEDIRTSEIADRIELDTEDAYKEFLLRGYEYGQAFRGIYK TCNSGERGYLYWTGNWVTFLDSLLQTALLAERSDTLRLPTRVRHLRIDPNKHLEHVVE RDGIQVVELRNDHSTNGCIAGGVECCDLNAHSVARRIQVSGQLYHEKVYFVPHFDQNC LKEQPETSTILKDYAAVIKQTLYNGFSKWQKAGLLKKLTNGPLIEKALPVLKSSLNEV VLDDTVTRFMHDGKCTILPHFTELFKIPDSDDFAEMVIGKLKSVRGIFELDRLWAGAV INDRIVKSLQDICIENSAGHHAKMAAVDLVSTDQIRHCIEANSSHPLLEVDYMCVGAN VDHLDESTLEIVGGKKQKIVLDENFTGHGEVKNMDYVLLDKVLNKKANPIAFIEACKH LIRDDGFLLVVEVTSQFEIALALESLLGNEMAGDADRKYTQFFTHEQLLEIFKATGFK ICNFQSDPALMTTTYAVRRVAPVPRDPAFIDVDDIKEFSWIEPLQKTVEERLNEPDSK TIWLVSNKCRNNGIVGLALCFVEENLKSNRFRSAFDMSATKAIRDGPPVWTIDDEETK KIIDLDLHANDYMDGQWGSMRHIVVKDEDAHVYKDCEHAFINTLTRGDVSSLTWFESP NQYFDSMAKTKSSQELCSVYYAPINFRDIMLAYGRLPPDAIPGNFADRECLLGMEFSG RLKDGTRLMGILPAQALATTVMVDRDYAWEVPSDWTLAEASTVPVVYTTAYYALVRRG MMKKGDKVLIHGGAGGVGQAAIAIALAAGCEVFTTVGSAEKRQFLKNLFPQLQEHHFA NSRSADFELHIRQHTKGRGVNIVLNSLANEMLQASLRCLARHGRFLEIGKVDLSQNSS LGMAKLLDNVSIHGILLDSIMDPTVGDLEEWKEIARLLEQGIKSGVVKPLHSHSFPAN KAEEAFRFMSAGKHIGKVIMEIRTEESTKICPPSRISVRAICRTLCHPQHVYLITGGL GGFGLELAQWLINRGARKLVLTSRTGIRTGYQARCVHFWRRTGVSVLVSTLNISKKSD AIELVKQCTQMGPLGGVFHLAMVLRDCLFENQNIQNFKDAAEAKYYGTINLDYATRDH SDKETLKWFVVFSSITSGRGNAGQTNYGWSNSTMERMIDQRRADGFPGIAIQWGAIGD VGVILENMGDNNTVVGGTLPQRMPSCLSSLDNFLSWNHPIVSSFIKADMGAKKSAGGG NLMQTIAHILGVNDISQLNPDANLGDLGLDSLMGVEIKQALERDYDIVLSMKDIRTLT LNKLQQLAEQGGTGGTALQVNELEMKKDGERDAELNTVEMLEKQMNQLFKMRVDVNDL DPQDIIVKANKVEEGPITFFVHSIEGIATPLKKVMSKCEFPVYCFQSTKNVPQTSIED VAKCYIREMKKIQPTGPYRLIGYSYGACIGFEMACMLQQSDGQDAVEKLVLLDGSHLY MQTYRNVYRMAFGVTGDTLVNNPLFESEIMCAMTLRFANVDYKKFRVELLQQSGFKAR VQKVVDTVMTTGLFKSDETVAFACMAMHSKFLMADKYKPERKFRGHITLIRAEQGAAR EEDVGRDYGISQVSDDSDVHVVEGDHDTFVQGKSSAKTVSIINSIILNK" gene <1058089..>1058545 /locus_tag="CRE_29573" /db_xref="WormBase:WBGene00086106" mRNA join(<1058089..1058197,1058508..>1058545) /locus_tag="CRE_29573" /product="hypothetical protein" /db_xref="WormBase:CRE29573" /db_xref="WormBase:WBGene00086106" CDS join(1058089..1058197,1058508..1058545) /locus_tag="CRE_29573" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12378.1" /db_xref="WormBase:CRE29573" /db_xref="WormBase:WBGene00086106" /translation="MTKEKKEEYKKKKKTLRLTGQRKLGKEEEEEDDADANDVMAEFQ VMKG" gene <1062857..>1067499 /locus_tag="CRE_29574" /db_xref="WormBase:WBGene00059960" mRNA join(<1062857..1062913,1066124..1066336,1066454..1066551, 1066597..1066673,1066743..1066849,1066896..1067242, 1067295..>1067499) /locus_tag="CRE_29574" /product="hypothetical protein" /db_xref="WormBase:CRE29574" /db_xref="WormBase:WBGene00059960" CDS join(1062857..1062913,1066124..1066336,1066454..1066551, 1066597..1066673,1066743..1066849,1066896..1067242, 1067295..1067499) /locus_tag="CRE_29574" /note="contains similarity to Pfam domain PF03314 Protein of unknown function, DUF273; contains similarity to Interpro domain IPR004988 (Protein of unknown function DUF273)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12699.1" /db_xref="InterPro:IPR004988" /db_xref="PFAM:PF03314" /db_xref="WormBase:CRE29574" /db_xref="WormBase:WBGene00059960" /translation="MFPTVPLVNYYSTKSEGLEKAELPDQFSLSRSLQSKQLDITVLI IVNDSESAEREYDIALNSVRCYCEAKKYRLEIAEDTDFRHFCQQENSMFRRHCIVAHL LRESDYVFLLEPGMAVVNNDIRLEEFIDEKYDMTMYDKFTSWEIDTNSYVVKNTVWSR DFLMKLAEFETKIPSSSNDNTALHILLQKTFYPQFTEEAGNCLKILENLEFSTGNQQI MYTFEACIRSVIGEIHEFDNLRIIKKVGRQLGPTWIPVFQGTAWTREIWLTDSKWSQN RDFMLNGLKNAHQTTFAHGVLSNILLGRQTWRSPFINPPNQGECDFSKWEYDRSLITS KAEIDEYLMEKYDEVEKMRWQSLAAVGNYMSKD" gene <1068643..>1069677 /gene="Cre-tba-6" /locus_tag="CRE_29575" /db_xref="WormBase:WBGene00059958" mRNA join(<1068643..1068663,1068715..1068937,1069111..1069232, 1069279..>1069677) /gene="Cre-tba-6" /locus_tag="CRE_29575" /product="CRE-TBA-6 protein" /db_xref="WormBase:WBGene00059958" CDS join(1068643..1068663,1068715..1068937,1069111..1069232, 1069279..1069677) /gene="Cre-tba-6" /locus_tag="CRE_29575" /note="contains similarity to Pfam domain PF00091 Tubulin/FtsZ family, GTPase domain; contains similarity to Interpro domains IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase), IPR004057 (Epsilon tubulin)" /codon_start=1 /product="CRE-TBA-6 protein" /protein_id="EFP12444.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR002453" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR004057" /db_xref="PFAM:PF00091" /db_xref="WormBase:CRE29575" /db_xref="WormBase:WBGene00059958" /translation="MPQYKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVE DDSYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGK EDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLM ERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDI CRRNLDLARYVHKTHSFIQNIFSSSFFYLFSFLFIR" gene complement(<1069770..>1071079) /locus_tag="CRE_29779" /db_xref="WormBase:WBGene00059959" mRNA complement(join(<1069770..1070531,1070576..1070720, 1070766..>1071079)) /locus_tag="CRE_29779" /product="hypothetical protein" /db_xref="WormBase:CRE29779" /db_xref="WormBase:WBGene00059959" CDS complement(join(1069770..1070531,1070576..1070720, 1070766..1071079)) /locus_tag="CRE_29779" /note="contains similarity to Homo sapiens 57 kDa protein; ENSEMBL:ENSP00000373026" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12500.1" /db_xref="WormBase:CRE29779" /db_xref="WormBase:WBGene00059959" /translation="MNPNERSKYLCDQYGQVLGGIQNVTISLKPVFSFSEQLDQRKSQ YVLAELNKNPADAKSQSVKKIDSEYILRDLQNQANKDQTYSRDAPDRPFLTGTPINAK DIRAKIESFDNAIVIPQIINGQVFFTTHGDADTHTAVDGSTSNPNLSEGNSVGATKGV DLHKVKFTFAQLVTLLGPVTCQRLEREFAKNNKLSDAEMAQLRTACESGSEMSLATGR SSETLRTAQSVEPNLLSTRTANSVEPNLLSVYSARSPGVFTKNEGVLTAQSPEPNLLS VRTANSLEPNLLSVRSARDFTTMSQLKAQSPGILTAQLPEPNLLSTRTARSATSLSDR ESKDVLTAIEIDSPTTGVNTAKSIASGSTQSVFTANEIESIRSSQDVLTAVSILSDLS RSSQDVTTALEIPE" gene <1071602..>1072629 /locus_tag="CRE_29576" /db_xref="WormBase:WBGene00086108" mRNA join(<1071602..1071630,1071716..1071830,1071878..1072263, 1072327..1072424,1072487..>1072629) /locus_tag="CRE_29576" /product="hypothetical protein" /db_xref="WormBase:CRE29576" /db_xref="WormBase:WBGene00086108" CDS join(1071602..1071630,1071716..1071830,1071878..1072263, 1072327..1072424,1072487..1072629) /locus_tag="CRE_29576" /note="contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain), PF03953 (Tubulin/FtsZ family, C-terminal domain); contains similarity to Interpro domains IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase), IPR008280 (Tubulin/FtsZ, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12384.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR002453" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR008280" /db_xref="PFAM:PF00091" /db_xref="PFAM:PF03953" /db_xref="WormBase:CRE29576" /db_xref="WormBase:WBGene00086108" /translation="MEVNSEVIYRPTYTNLNRLVAQIISSITASLRFEGALNVDLTEF QTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVADMTHACFEPGYQMVKCDPRRGKYM AVCLLYRGDVVPKDINSAIASVKTKRTVQFVEWFGEGNFHKMMCFVKVSNWFQSRNQL STTNCCSGWRFGKTNENNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE AREDMAALEKDYEEIGEDELPDDIDDQSYRGRSAASRY" gene complement(<1072877..>1074844) /locus_tag="CRE_29780" /db_xref="WormBase:WBGene00059957" mRNA complement(join(<1072877..1072948,1073825..1073906, 1073957..1074132,1074761..>1074844)) /locus_tag="CRE_29780" /product="hypothetical protein" /db_xref="WormBase:CRE29780" /db_xref="WormBase:WBGene00059957" CDS complement(join(1072877..1072948,1073825..1073906, 1073957..1074132,1074761..1074844)) /locus_tag="CRE_29780" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12624.1" /db_xref="WormBase:CRE29780" /db_xref="WormBase:WBGene00059957" /translation="MAESIIDFVLVSIILAALAVATLILLFMYSTRIRQPFHKCLGRS TTKTEDVETGIAPKRTTIRVVKSLPNSSLPPTPTAYTKPPVRRTHTNPVEESDSPSRQ FMFIYPKKSIVQCEQSTFDSRSTRSSYLPERRNSQ" gene complement(<1075410..>1076692) /locus_tag="CRE_29781" /db_xref="WormBase:WBGene00086109" mRNA complement(join(<1075410..1075535,1075879..1075974, 1076026..1076258,1076289..1076307,1076366..1076443, 1076493..1076572,1076617..>1076692)) /locus_tag="CRE_29781" /product="hypothetical protein" /db_xref="WormBase:CRE29781" /db_xref="WormBase:WBGene00086109" CDS complement(join(1075410..1075535,1075879..1075974, 1076026..1076258,1076289..1076307,1076366..1076443, 1076493..1076572,1076617..1076692)) /locus_tag="CRE_29781" /note="contains similarity to Pfam domain PF05739 SNARE domain; contains similarity to Interpro domains IPR006011 (Syntaxin, N-terminal), IPR000727 (Target SNARE coiled-coil region), IPR006012 (Syntaxin/epimorphin, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12391.1" /db_xref="InterPro:IPR000727" /db_xref="InterPro:IPR006011" /db_xref="InterPro:IPR006012" /db_xref="PFAM:PF05739" /db_xref="WormBase:CRE29781" /db_xref="WormBase:WBGene00086109" /translation="MDFNRDAGKETVSQLQLNIQNLNQQVIQLESFITNLSDSSAAGQ REREIFNKKAHDAQELSKDTNTLLKKLVVMSNSDKNLRGVLLNRLQASQRRAAQTEKA GMVAAEMDAQAARDENEMYGNQGRSGQMQMTAQQQGNLADIKERQHALQQLERDIGDV NAIFAELANIVHEQGDMMDSIEANVEHSQIYVEQGAQNVQQAVYYNQKARQKKLLLLC FFVILIFIIGLTIYLAK" gene <1078155..>1080767 /locus_tag="CRE_29577" /db_xref="WormBase:WBGene00059956" mRNA join(<1078155..1078214,1078261..1078974,1080292..1080405, 1080454..1080539,1080584..>1080767) /locus_tag="CRE_29577" /product="hypothetical protein" /db_xref="WormBase:CRE29577" /db_xref="WormBase:WBGene00059956" CDS join(1078155..1078214,1078261..1078974,1080292..1080405, 1080454..1080539,1080584..1080767) /locus_tag="CRE_29577" /note="contains similarity to Pfam domain PF04176 TIP41-like family; contains similarity to Interpro domain IPR007303 (TIP41-like protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12309.1" /db_xref="InterPro:IPR007303" /db_xref="PFAM:PF04176" /db_xref="WormBase:CRE29577" /db_xref="WormBase:WBGene00059956" /translation="MLALFAERCQSAFNFRSPIQMSMLSQLIILIIVFCPNNAGRVFY VIGAASFFMDACSITKKLGNGRNLRSCQRFFKISETAIVRRSSSLVLFGLYVVYFLSL PSRVKIYLSYEKNCVFQIPKISYTVSFALSLPLSKAVSAQMPIVVKVIIFLMATLDGA TTAYTDYLGHKAARNQKKDDTAGEEKVIGYPEVCFKNGRLSMTFNKGSIISFSYSDAV EVMMEGKGESKVTENEKEREKTMDYFSQASHYKGTTNGWEISPTDEAIRNEKRTKSDD AEFTASFKLFEEQLPKGFVKLSARARIAKGGCFYVLLRFYMRVDGVLLRVCDTRIVGD SDSHHVIREWQLREGKYEELGTTDEARLLDADQPWKEFKVFKATTEKLTIV" gene <1081224..>1082251 /locus_tag="CRE_29578" /db_xref="WormBase:WBGene00086118" mRNA join(<1081224..1081675,1081787..1081979,1082025..1082129, 1082243..>1082251) /locus_tag="CRE_29578" /product="hypothetical protein" /db_xref="WormBase:CRE29578" /db_xref="WormBase:WBGene00086118" CDS join(1081224..1081675,1081787..1081979,1082025..1082129, 1082243..1082251) /locus_tag="CRE_29578" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12470.1" /db_xref="WormBase:CRE29578" /db_xref="WormBase:WBGene00086118" /translation="MPCNPHSKYLHSSLEYTQFLLYYSTTTHKDPDRFTRIYSKLETL NRDETVTENDMNQLRFLECSVKNQWIDYERFSREREEEWKQVVRSVTIFSQIIIFQKF GSLIITFILGLKIWYVQYYIFLNHRMPWFMEYLMSCASYWLYIIAFYVWIFMYSEEAV DPPKSNKSFQSEIKYSIPNSTEFIRRQLSLINEHSEKMESFRMRCLTAVLLQMRTFII ALILFIFYFLFRQYHETEENEHAWFCILAFVLEL" gene complement(<1083272..>1084552) /gene="Cre-syn-13" /locus_tag="CRE_29782" /db_xref="WormBase:WBGene00059954" mRNA complement(join(<1083272..1083397,1083738..1083833, 1083885..1084166,1084225..1084302,1084354..1084433, 1084477..>1084552)) /gene="Cre-syn-13" /locus_tag="CRE_29782" /product="CRE-SYN-13 protein" /db_xref="WormBase:WBGene00059954" CDS complement(join(1083272..1083397,1083738..1083833, 1083885..1084166,1084225..1084302,1084354..1084433, 1084477..1084552)) /gene="Cre-syn-13" /locus_tag="CRE_29782" /note="contains similarity to Pfam domain PF05739 SNARE domain; contains similarity to Interpro domains IPR006011 (Syntaxin, N-terminal), IPR000727 (Target SNARE coiled-coil region), IPR006012 (Syntaxin/epimorphin, conserved site)" /codon_start=1 /product="CRE-SYN-13 protein" /protein_id="EFP12725.1" /db_xref="InterPro:IPR000727" /db_xref="InterPro:IPR006011" /db_xref="InterPro:IPR006012" /db_xref="PFAM:PF05739" /db_xref="WormBase:CRE29782" /db_xref="WormBase:WBGene00059954" /translation="MDFNRDAGNETVSQLQLNIQNLNQQVIQLESFITNLSDSSAAGQ RERELFNKKAHDAQELSKDTNTLLKKLVVMSNSDKNLRGVRERLQNEYIGVLNRLQAS QRRAAQTEKAGMVAAEMDAQAARDENEMYGNQGRSGQMQMTAQQQGNLADIKERQHAL QQLERDIGDVNAIFAELANIVHEQGDMVDSIEANVEHAQIYVEQGAQNVQQAVYYNQK ARQKKLLLLCFFVILIFIIGLTIYLAK" gene complement(<1085578..>1087900) /gene="Cre-fcp-1" /locus_tag="CRE_29783" /db_xref="WormBase:WBGene00059953" mRNA complement(join(<1085578..1085748,1085798..1085926, 1085975..1086446,1086493..1086968,1087012..1087254, 1087302..1087430,1087478..1087654,1087703..>1087900)) /gene="Cre-fcp-1" /locus_tag="CRE_29783" /product="CRE-FCP-1 protein" /db_xref="WormBase:WBGene00059953" CDS complement(join(1085578..1085748,1085798..1085926, 1085975..1086446,1086493..1086968,1087012..1087254, 1087302..1087430,1087478..1087654,1087703..1087900)) /gene="Cre-fcp-1" /locus_tag="CRE_29783" /note="contains similarity to Pfam domains PF03031 (NLI interacting factor-like phosphatase), PF00533 (BRCA1 C Terminus (BRCT) domain); contains similarity to Interpro domains IPR011947 (FCP1-like phosphatase, phosphatase domain), IPR004274 (NLI interacting factor), IPR001357 (BRCT); coded for by the following C. remanei cDNAs: DT934396, DR409690" /codon_start=1 /product="CRE-FCP-1 protein" /protein_id="EFP12671.1" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR004274" /db_xref="InterPro:IPR011947" /db_xref="PFAM:PF00533" /db_xref="PFAM:PF03031" /db_xref="WormBase:CRE29783" /db_xref="WormBase:WBGene00059953" /translation="MEVIFEESAADCTAGHLKAIDGTFVIKDAVLLEFKIKGEVAGKI KTPCDGVVSFGKGLKPGVALSKGQVIATMSECQHDIVIKDMCGDCGKDLREKGGRAGQ RKEQATANVSMIHHVPELIVSDSLAKKIGSADETNLITTRKLVLLVDLDQTIIHTSDK PMSADAEKHKDITKYNLHSRVYTTKLRPHTTEFLNKMAAMYEMHIVTYGQRQYAHRIA QILDPDARLFGQRILSRDELFSAQHKTRNLKALFPCGDNLVVIIDDRADVWQYSEALI QIKPYRFFKEVGDINAPKDSKEQMPVQIEDDAHEDRVLEEIERVLTNIHDKYYEKHDL KDGDQALLDVKEVIKEERHKVLDGCVIVFSGIVPTGEKLERTDIYRLCVQFGATIVPE VVEEVTHVVGARYGTTKVHQAHRLGKNVVTVQWVYACVEKWMKADEKQFELTKESTPP VGRPLGSKYVNDLSNMDTIGKAALADMNNEVDEALSDEDEDEGDNDDDEDDDGPENRE DDKVQRHKRDKIADKEKIYQEDEKEKKSGRNEEPESSDAQGKGQKRKHCPEMDDGEEG SDSKDDDDEAPMSYKALLSRSRKEGRIVPESDKDDVFDVDDEKGHVAPTNMDDDDDDE DNEDEDVAESDDDDEFEDMAALIERQISDAADEKDDNHME" gene complement(<1088461..>1093119) /gene="Cre-tag-214" /locus_tag="CRE_29784" /db_xref="WormBase:WBGene00059952" mRNA complement(join(<1088461..1088544,1088597..1088662, 1088704..1089237,1089326..1090241,1090442..1090822, 1090879..1091058,1091103..1091311,1091362..1091826, 1091896..1092042,1092378..1092480,1092546..1092625, 1092680..1092758,1092813..1092922,1092973..>1093119)) /gene="Cre-tag-214" /locus_tag="CRE_29784" /product="CRE-TAG-214 protein" /db_xref="WormBase:WBGene00059952" CDS complement(join(1088461..1088544,1088597..1088662, 1088704..1089237,1089326..1090241,1090442..1090822, 1090879..1091058,1091103..1091311,1091362..1091826, 1091896..1092042,1092378..1092480,1092546..1092625, 1092680..1092758,1092813..1092922,1092973..1093119)) /gene="Cre-tag-214" /locus_tag="CRE_29784" /note="contains similarity to Pfam domain PF08783 DWNN domain; contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR014891 (DWNN domain), IPR001878 (Zinc finger, CCHC-type); coded for by the following C. remanei cDNAs: DT934066" /codon_start=1 /product="CRE-TAG-214 protein" /protein_id="EFP12606.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR014891" /db_xref="PFAM:PF08783" /db_xref="WormBase:CRE29784" /db_xref="WormBase:WBGene00059952" /translation="MSSIHYKFRAELDYKTLQFDGLHIRGEQLVREICAKENLKLELF ELQLQNAHTKKMYTDDELIPRNSSIIVQRSPRKDAAKVQKVQAGVNSGMVNQADASSS SLDPNIHIGSAEFENMDEAERLNHIRDQSTRAYDPSNFRRRPQGIMTGPPPPTYTCNR CYQPGHWYKNCPMLNTKRTTGIPSQELMETTADDPAAMLHPSGKYVVPIMHWKARQDT LAKKLEDGSSSPAQADRKVPPELLCPLCQSLFKEAIVTSCCGNSYCAECIEQRIIDPE NRKCPGADCGRDLSITSIIPNKTLRDAAAAWLSAGAPGQPTAQGIQEPEQIRIRIGLK APASSNAISSQQLTSGISPGSALVSQQPAPSVAVSTVPPSQVSTALAVSCLPSSSTLA STGIVQDVSLPPPRLHHELPPGIPGVTGLPHFPQAVPGIPNAAVPQTQPVSLNYGFSI AAYTAGFPPAASSGPRVSTISDEWNAFLQTKDRHDKRRDKDRPRHKDGHDSRSRRRRD SSSSSSSSSATSYSDEEERQRRRRREKESSKKRRSVEKERPRRDDHRRERDRERDRDR EYRDHRDHREHRDHRDARSSARSKDSKVSASSSSHRRDRDDEKRRDRKRDDGRKKDRE EKMEEDTRERANKDVESKDEDEIDGIIAEYGNALAPETVGETRVTEEKENLNDEEIST PHEENTQSPVSKAVDEDEPAADEEPVDEENSLPSREKSLDSVNQAMETSEAEVAETKE EKMPLEEEEDDEEMEADVEMKENQEKEDEETDRKAKESQSSTMNTADEDDEGGKKSRK HKKSKKSKKHHRKEDDGDDEDEERRRKKHKKHKKEKKTKKDRRDADSDQEDDRKHRKK ERDSDKKYDDEDDSDRKERKKEKNRTESYSTTDRSERNKEKEKKEDDVDDRKEKKKES DRRQDEDDKKKERKRDREHEEYDSDAPKIKVKRDEKIKDDRKESDREKDRKKEDEKEK RKERDERDKKREKEKEKEREKERAKEKEKEKEREREKEKERLKEKEKEAEKERQKEKE REKNKEKERKEKAKELVPEKPRRSVHERLQRADTVKVSSSSSSKTVPTLARKPVSFTV TSSKAASNIRVRQYSSSSSTKEQEEEDVSRSKQDRRKKDETDVESIGDKDKKQKSSRQ LSASGPTVSMHKNTKIKFDL" gene <1095176..>1095579 /locus_tag="CRE_29579" /db_xref="WormBase:WBGene00086114" mRNA join(<1095176..1095190,1095241..>1095579) /locus_tag="CRE_29579" /product="hypothetical protein" /db_xref="WormBase:CRE29579" /db_xref="WormBase:WBGene00086114" CDS join(1095176..1095190,1095241..1095579) /locus_tag="CRE_29579" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12416.1" /db_xref="WormBase:CRE29579" /db_xref="WormBase:WBGene00086114" /translation="MSKLLVLLLSVFVLGTLCLIPDVDDIVDQALDDTEPMGGSMPIA DCPDQVCPKGFYCRKGVCTYWQPIKKFADQDNVTARRKRKSKRFIKKNMRPGMNCKER YECPHGMTCTNGLCL" gene complement(<1096136..>1096575) /locus_tag="CRE_29785" /db_xref="WormBase:WBGene00059951" mRNA complement(join(<1096136..1096408,1096564..>1096575)) /locus_tag="CRE_29785" /product="hypothetical protein" /db_xref="WormBase:CRE29785" /db_xref="WormBase:WBGene00059951" CDS complement(join(1096136..1096408,1096564..1096575)) /locus_tag="CRE_29785" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12591.1" /db_xref="WormBase:CRE29785" /db_xref="WormBase:WBGene00059951" /translation="MNLQILLTLPFITPAHRTCRRSTQCPQNEVCHHGYCQSFEDSRC ITSAFCPRNYKCINGKCEKHNGVRHFLLGMYCMTNFQCPLRMYCSRGHCV" gene <1098231..>1099949 /locus_tag="CRE_29580" /db_xref="WormBase:WBGene00059950" mRNA join(<1098231..1098303,1098987..1099067,1099111..1099707, 1099762..>1099949) /locus_tag="CRE_29580" /product="hypothetical protein" /db_xref="WormBase:CRE29580" /db_xref="WormBase:WBGene00059950" CDS join(1098231..1098303,1098987..1099067,1099111..1099707, 1099762..1099949) /locus_tag="CRE_29580" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12731.1" /db_xref="WormBase:CRE29580" /db_xref="WormBase:WBGene00059950" /translation="MGVCRRIFKNYEPTELTICVTICCEPRAPPRFDHWNISKPGYPP KIISCSRGSTNHDENREKRSKRKMVKRRKKSDISEKSGKSEKEFDNVEVQILSDQPLL HSDSATLISDDVETMMSSPEIVERRDIADEITVTDFDGKQLEAQDHHVSMTSLDSIAG LGGMMSMPEDSDDVGMAKGVRNSEDNDEKLKPEEEKREEEIIKQMESKKKFDLLLNGD VEIPTVPPVMNDVENPKKKVIVRRKKKSTTPETAPRYREFTETSINMYIEMNKQNIGE FIWDQQCTRIDALVAPIIELDRTTTPEIPVEIEIFD" gene <1101407..>1102114 /locus_tag="CRE_29581" /db_xref="WormBase:WBGene00059949" mRNA join(<1101407..1101479,1101529..1101636,1101759..1101892, 1101950..>1102114) /locus_tag="CRE_29581" /product="hypothetical protein" /db_xref="WormBase:CRE29581" /db_xref="WormBase:WBGene00059949" CDS join(1101407..1101479,1101529..1101636,1101759..1101892, 1101950..1102114) /locus_tag="CRE_29581" /note="contains similarity to Tetraodon nigroviridis Chromosome 11 SCAF9261, whole genome shotgun sequence. (Fragment).; TR:Q4T5H3; coded for by the following C. remanei cDNAs: DR777358" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12433.1" /db_xref="WormBase:CRE29581" /db_xref="WormBase:WBGene00059949" /translation="MSIPDKSLFNKFKEMEQNQAIRSKDNVYSKDFEPKKLDKDSSEY GRPKPGTLTEQRAKKAAAHVHREMLTLCEVLEDYGKKDKEGEPTRITFGRLFTIYVNI SDKVVGTLLRARKHKMVDFEGEMLFQKRDDHVVITLLLEGTELKEAIRAHAAANPKD" gene <1103383..>1105402 /locus_tag="CRE_29582" /db_xref="WormBase:WBGene00086104" mRNA join(<1103383..1103463,1104589..1104659,1104913..>1105402) /locus_tag="CRE_29582" /product="hypothetical protein" /db_xref="WormBase:CRE29582" /db_xref="WormBase:WBGene00086104" CDS join(1103383..1103463,1104589..1104659,1104913..1105402) /locus_tag="CRE_29582" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12365.1" /db_xref="WormBase:CRE29582" /db_xref="WormBase:WBGene00086104" /translation="MYKVPKKSNTNLARSIRKREFSYVDRQKASKPTPLSEDDWKSPR SEDSFDLLDPSNSSKEPTTSSRPLPIPTIRPPEVVIQIDEVDSPILGLIDESDDLHPD VFDESRRGRLEPSSSIDANSLSATRSSSVIEDDVRSQISFVMRERLHSIAKEVHRRTS AVREDLIRETPEDTVSVASNIPKQSEHRPSLMSLIGLQVRFIFEISKFFIFKE" gene complement(<1105420..>1107234) /locus_tag="CRE_29786" /db_xref="WormBase:WBGene00059948" mRNA complement(join(<1105420..1105650,1105734..1105904, 1105949..1106292,1106350..1107025,1107070..>1107234)) /locus_tag="CRE_29786" /product="hypothetical protein" /db_xref="WormBase:CRE29786" /db_xref="WormBase:WBGene00059948" CDS complement(join(1105420..1105650,1105734..1105904, 1105949..1106292,1106350..1107025,1107070..1107234)) /locus_tag="CRE_29786" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12376.1" /db_xref="WormBase:CRE29786" /db_xref="WormBase:WBGene00059948" /translation="MGIDMSTRATRTLNLEFQMKTRDGREMIQCEVQSTFTVCFCEIA EGNCWDFSEIMESVYTISRDISTFPKIAFVKAGNNRKAVENIQLILNSLHKNAPELST QLLNFSMPTSTSNKIFDKKHCKKAKDPSEEDIEKLKNRREVGLLIRPGKHYCFKFFSR IHQDFSHEKSTIFLMMREKLLDQINSNDALYLCDKNETCEFEKIKKILPQKLDELLEF TNSITDILMEHPVIFKEAKKKFKFDPEDVYYNQRFRGIVISWIFGVALLVLVSMIGRS VCSYEIPDERTTLQGRHFKLKDIEKELKRKLLKSRGEESEKSWRTVEAEREMRRAIKL DKKREKKRKLEKINVKEFPTLPDNSPPGGNERNIKIRKNDSEFELQNTQEDIAEFIGT AVEVSPPLQPAIPVRRRHEKSLPSRTDQGTFVTNIISDNAAAQRSLMKTQTVSDPDVL ATPPTPSTPLLGGHQPSTPLLGGHQPKVRRISRPKTPLPHGQKQSRTPSSQSRCDPSD GIPKAISRTPKEKSWLRFWT" gene <1108119..>1110002 /gene="Cre-tax-2" /locus_tag="CRE_29583" /db_xref="WormBase:WBGene00059947" mRNA join(<1108119..1108216,1108262..1108410,1108459..1108543, 1108634..1108785,1108835..1108906,1108956..1109137, 1109183..1109687,1109737..>1110002) /gene="Cre-tax-2" /locus_tag="CRE_29583" /product="CRE-TAX-2 protein" /db_xref="WormBase:WBGene00059947" CDS join(1108119..1108216,1108262..1108410,1108459..1108543, 1108634..1108785,1108835..1108906,1108956..1109137, 1109183..1109687,1109737..1110002) /gene="Cre-tax-2" /locus_tag="CRE_29583" /note="contains similarity to Pfam domains PF00027 (Cyclic nucleotide-binding domain), PF00520 (Ion transport protein); contains similarity to Interpro domains IPR005821 (Ion transport), IPR000595 (Cyclic nucleotide-binding), IPR014710 (RmlC-like jelly roll fold)" /codon_start=1 /product="CRE-TAX-2 protein" /protein_id="EFP12601.1" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR014710" /db_xref="PFAM:PF00027" /db_xref="PFAM:PF00520" /db_xref="WormBase:CRE29583" /db_xref="WormBase:WBGene00059947" /translation="MIDFEFLINFQINSFWLLFDMLDNSFANPYAIRIARTLSYMIYI IHCNSCVYYKLSAMQAFGQIAYLENGKWYLNKWVYNNQGNAYIRCFYFTAAVATSTGN NPAPTNVIEYIYMTCSWMMGVFVFALLLGQIRDIVSNANRNREEFQRKMDLALGECQK LGLKQETTNRVRDWFIYTWQQQKTLDEKKLIEKLPLKLQTDLALSVHYTTLSKVQLFQ DCDRALLRDLVLKLRPVIFLPGDMICLKGDVGKEMYIINQGILQVVGGDHNEKVFAEL MQGAVFGEISLLAIGGNNRRTASIRAKGYCTLFVLAKEDLNDVIRYYPQAQAILRRKA AAMLKNDKKSDEKTEKIKQQAELEDRCKINPRQVPKLITVREIRLLENGLYETFQLIA NMEEMNENKGVRDLKKAIEEETDKSRRQSIYYPWSTLQRDDEDEEEWNEEDLSSVGED SDIEPMENHEGPMDDDVDPMEDIDLAAEVSHSDEDDDWEKPGSSGTQKLHSD" gene complement(<1110082..>1111411) /locus_tag="CRE_29787" /db_xref="WormBase:WBGene00059946" mRNA complement(join(<1110082..1110171,1110226..1110555, 1110606..1110824,1111005..1111139,1111187..>1111411)) /locus_tag="CRE_29787" /product="hypothetical protein" /db_xref="WormBase:CRE29787" /db_xref="WormBase:WBGene00059946" CDS complement(join(1110082..1110171,1110226..1110555, 1110606..1110824,1111005..1111139,1111187..1111411)) /locus_tag="CRE_29787" /note="contains similarity to Pfam domain PF00069 Protein kinase domain; contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12471.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="WormBase:CRE29787" /db_xref="WormBase:WBGene00059946" /translation="MDKTLDVSNLSPGTQVSYLFKNNFIRFPFQVYKWTIDKKIAQGD FSYIYACNTPNNMPNNKQFALKCESAQSPLQMLKVEAFVLQKISKKNSRHFCDIEDIG KFQNIHYIVMHMVGRALVDYIKTSSTGTISVNCALSVGIQIVEALEDLHMCGYIHRDL KPSNICFGRKDRGEVGKMFLLSFGIARKYVDSKNQIRKPREHVEFRGTVRYASLNCHQ FQELSRKDDLESTLYVLVEMITGYLPWKGLPDVLNVVRVKQQSRQQPGIYQFLKGACP VDELREMMMLIDSYTYFSNPDYTSIYNILRRAMRRNPQPEHPYDWEQGGTNSLCDL" gene <1111953..>1113503 /locus_tag="CRE_29584" /db_xref="WormBase:WBGene00059945" mRNA join(<1111953..1112087,1112129..1112482,1112528..1112607, 1112713..1112798,1112844..1112971,1113180..1113272, 1113318..>1113503) /locus_tag="CRE_29584" /product="hypothetical protein" /db_xref="WormBase:CRE29584" /db_xref="WormBase:WBGene00059945" CDS join(1111953..1112087,1112129..1112482,1112528..1112607, 1112713..1112798,1112844..1112971,1113180..1113272, 1113318..1113503) /locus_tag="CRE_29584" /note="contains similarity to Pfam domain PF06342 Alpha/beta hydrolase of unknown function (DUF1057); contains similarity to Interpro domains IPR008262 (Lipase, active site), IPR010463 (Protein of unknown function DUF1057, lipase putative)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12498.1" /db_xref="InterPro:IPR008262" /db_xref="InterPro:IPR010463" /db_xref="PFAM:PF06342" /db_xref="WormBase:CRE29584" /db_xref="WormBase:WBGene00059945" /translation="MATAVEIALAKQPYFDLNSLCKTVFVTYKAGPKLDKLVTVQSQY VDICNKPGVRGTVVSLAGSPGSHNDIKYMRDSFEKHNIRLVCTNWPGSEFVTGETHDD TCKCIVQLDSGGLRDSYTNEERNSYVKALMEKLGMKNVEKLIVMGHSRGGESALQMAC ILSEDRSWPLIGAVMINSPGFVMHRGISVRMGTINTLAYLIKLRWKMIDCVLFPVLDW FYNDFIGLRVADGKVSAAAILPMQTFAFEKQKASMDEMKKKPWVRMFYAYGSKDFLVA ESDSEELAMYFKGDHYVIKDKKESEEAIPKIWNSYANGQPYVTANFTEEGHYLQKTYP EFLIQVLGGMFDVETKSSK" gene complement(<1113637..>1115865) /gene="Cre-acr-19" /locus_tag="CRE_29788" /db_xref="WormBase:WBGene00059944" mRNA complement(join(<1113637..1113939,1114002..1114245, 1114297..1114403,1114453..1114565,1114617..1114703, 1114750..1115141,1115317..1115707,1115796..>1115865)) /gene="Cre-acr-19" /locus_tag="CRE_29788" /product="CRE-ACR-19 protein" /db_xref="WormBase:WBGene00059944" CDS complement(join(1113637..1113939,1114002..1114245, 1114297..1114403,1114453..1114565,1114617..1114703, 1114750..1115141,1115317..1115707,1115796..1115865)) /gene="Cre-acr-19" /locus_tag="CRE_29788" /note="contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region); contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor, N-terminal), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region)" /codon_start=1 /product="CRE-ACR-19 protein" /protein_id="EFP12573.1" /db_xref="InterPro:IPR002394" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="PFAM:PF02931" /db_xref="PFAM:PF02932" /db_xref="WormBase:CRE29788" /db_xref="WormBase:WBGene00059944" /translation="MINNICQLIVSITIFINGLESAKVIWTGDHERRLYAKLAENYNK LARPVRNESEAVVVHLGMDYQQILDIVGLSIGKLLENDKFQDEKHQIMNSNVWLRMSW TDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTW IPPAIIRSSCAIDIAYFPFDTQHCTMKFGSWTYSGFFTDLINTTISPATYKPNGEWEL LGLTSRRSIFFYECCPEPYYDVTFTVSIRRRTLYYGFNLLLPCMLISSLALLSFTLPA DCGEKLNLGVTIFMSLCVFMIMVAEAMPQTSDALPLIQIYFSCIMFEVGASVVATVIA LNFHHRSPEQYKPMNKFLKTLLLNWLPALLGMERPDVLEMSVHGAHYASDNKQKQKQY LIEVERHILTRPNGNGHSAVDKAVHLDLSTGNPDNKKSPSPKRTNPAIVGMKGLPTTH MNGGLESSINKYTCTKVTRPMENGSINYKSPQLNPSNNNNIYKPNTPKSPFEDRHFHH ILNELRVISARVRKEEAMHALQADWMFASRVVDRVCFLAFSAFLFMCTAIISYNAPHL FA" gene complement(<1122916..>1123098) /locus_tag="CRE_29789" /db_xref="WormBase:WBGene00059943" mRNA complement(<1122916..>1123098) /locus_tag="CRE_29789" /product="hypothetical protein" /db_xref="WormBase:CRE29789" /db_xref="WormBase:WBGene00059943" CDS complement(1122916..1123098) /locus_tag="CRE_29789" /note="coded for by the following C. remanei cDNAs: DR780307" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12614.1" /db_xref="WormBase:CRE29789" /db_xref="WormBase:WBGene00059943" /translation="MLYTIAAVGACAYFAVSDSIVKKVVVDTVKAVVWPTSDEQVAAQ LKEKKTDKEDEDWALY" gene complement(<1123985..>1126589) /locus_tag="CRE_29790" /db_xref="WormBase:WBGene00059942" mRNA complement(join(<1123985..1124245,1124340..1124426, 1124470..1124614,1124660..1125199,1125242..1125347, 1126334..1126440,1126486..>1126589)) /locus_tag="CRE_29790" /product="hypothetical protein" /db_xref="WormBase:CRE29790" /db_xref="WormBase:WBGene00059942" CDS complement(join(1123985..1124245,1124340..1124426, 1124470..1124614,1124660..1125199,1125242..1125347, 1126334..1126440,1126486..1126589)) /locus_tag="CRE_29790" /note="contains similarity to Pfam domains PF08840 (BAAT / Acyl-CoA thioester hydrolase C terminal), PF04775 (Acyl-CoA thioester hydrolase / Bile acid-CoA amino acid N-acetyltransferase); contains similarity to Interpro domains IPR006862 (Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase), IPR014940 (BAAT/Acyl-CoA thioester hydrolase C-terminal), IPR016662 (Acyl-CoA thioesterase, long chain)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12612.1" /db_xref="InterPro:IPR006862" /db_xref="InterPro:IPR014940" /db_xref="InterPro:IPR016662" /db_xref="PFAM:PF04775" /db_xref="PFAM:PF08840" /db_xref="WormBase:CRE29790" /db_xref="WormBase:WBGene00059942" /translation="MKHLKIDRADTLQPEHVHITASGLEPGRAYRFDMKLRHNYGSHA SYCILKADKDGNIDMRTEKPLRGTYFEADGMGLFLSMTPCEDFAYGGYLRCTPPIPFF YLLRLSDETGNQLDEMYIKKHWMHPLLTRTEIEHDGFCGTLFKPPGDGPFPCVMDISG TGGGLHEHKGAMLASEGFVVICVAFFQFKDLPYKLEDVEVEYFLKPIEFVLGLPYTTN MLGIQGVSFGATIVDLLATRYPQVTRNKDYQKQVLKLQIKAVVSINGPHAQSSYVMLK EHGKSMIVPELDDSKLFFVNTILATAPCFKTLTPLLTEENSIPWHWIPKETAFRLIVS GSVDDLCAPSIHANLHIQKKLQETGHYVELELVNGGHIMEPPYFPHHDIVYAKFQGFY CGYGGEITQHAKSQERTWANTINFFKRKLGSPPPMPDWVRLQKVDGPLKQIENRSRL" gap 1127533..1127542 /estimated_length=10 gene complement(<1129743..>1130496) /locus_tag="CRE_29791" /db_xref="WormBase:WBGene00059940" mRNA complement(join(<1129743..1129942,1130085..1130212, 1130261..>1130496)) /locus_tag="CRE_29791" /product="hypothetical protein" /db_xref="WormBase:CRE29791" /db_xref="WormBase:WBGene00059940" CDS complement(join(1129743..1129942,1130085..1130212, 1130261..1130496)) /locus_tag="CRE_29791" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12538.1" /db_xref="WormBase:CRE29791" /db_xref="WormBase:WBGene00059940" /translation="MSILSNLCPFMCVFFLSNPHSLTVSHLLQMNVPSTSTRGYAKYQ IRSSGMPRVLANESDVFTLDDVDVDEETDELKPNRIPITKEEEKSRLVECNLDSDEED DKTPPQEDDKGQNIRQSSKNSSTVESKERCRLRDSFDLDNDDSLSDDLDLLPPIPGAP NANTSWCSKLHRFNCCNPRIPSKCTIM" gene complement(<1130592..>1136378) /gene="Cre-hgo-1" /locus_tag="CRE_29792" /db_xref="WormBase:WBGene00059939" mRNA complement(join(<1130592..1130714,1130839..1131020, 1131122..1131353,1131400..1131698,1131748..1132117, 1132274..1132363,1136361..>1136378)) /gene="Cre-hgo-1" /locus_tag="CRE_29792" /product="CRE-HGO-1 protein" /db_xref="WormBase:WBGene00059939" CDS complement(join(1130592..1130714,1130839..1131020, 1131122..1131353,1131400..1131698,1131748..1132117, 1132274..1132363,1136361..1136378)) /gene="Cre-hgo-1" /locus_tag="CRE_29792" /note="contains similarity to Pfam domain PF04209 homogentisate 1,2-dioxygenase; contains similarity to Interpro domain IPR005708 (Homogentisate 1,2-dioxygenase); coded for by the following C. remanei cDNAs: DR408079" /codon_start=1 /product="CRE-HGO-1 protein" /protein_id="EFP12652.1" /db_xref="InterPro:IPR005708" /db_xref="PFAM:PF04209" /db_xref="WormBase:CRE29792" /db_xref="WormBase:WBGene00059939" /translation="MSEFDELKYLTGFGNEHASADPRVPDALPVGQNSPQKCAHGLYA EQLSGTAFTAPRSQNQRSWLYRIRPSVIHRPFEAISENGSNWTNNFSSIPPNPNQYRW NPFPLPTKEGVTFVDNLYTVCGGGDVISRTGLAIHQFSCNASMEHTAMYNSDGDFLIV PQQGALEITTEFGRLLVNPQEIIVIPQGIRFSVAVRGPSRGYILEVYGTHFQLPDLGP IGANGLANARDFEAPVAWFEDLDVEYTIINKYQGAWFQAKQGHSPFDVVGWHGNYNPY KYDLRKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVIFPPRWGCADNTFRPPY YHRNCMSEYMGLITGCYEAKEGGFKPGGGSLHSMMTPHGPDFNCFEMASNVDLKPQRV AEGTMSFMFESSLNMAITNWAINQNVDKDYYKDWQPLKKHFTLPK" gene complement(1132164..1132236) /locus_tag="CRE_31907" /db_xref="WormBase:WBGene00186315" tRNA complement(1132164..1132236) /locus_tag="CRE_31907" /product="tRNA-Asn" /db_xref="WormBase:CRE31907" /db_xref="WormBase:WBGene00186315" gene <1137314..>1138660 /locus_tag="CRE_29585" /db_xref="WormBase:WBGene00059938" mRNA join(<1137314..1137413,1137604..1137767,1137815..1138205, 1138338..1138420,1138472..1138555,1138601..>1138660) /locus_tag="CRE_29585" /product="hypothetical protein" /db_xref="WormBase:CRE29585" /db_xref="WormBase:WBGene00059938" CDS join(1137314..1137413,1137604..1137767,1137815..1138205, 1138338..1138420,1138472..1138555,1138601..1138660) /locus_tag="CRE_29585" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PDZ4; coded for by the following C. remanei cDNAs: DY527117" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12426.1" /db_xref="WormBase:CRE29585" /db_xref="WormBase:WBGene00059938" /translation="MAEISERYVEQFVTTFETMRRRAIAYYDGVFYLGRKLEKAAERL KEVAEPASYDARDYVNQSLAANSALDTIETETKNSLVEMYLGISVILIGLAGGQLSGA YALAPIIQYFFDSYVVVMILIALPIFVYYNVRKNSSLDDTERRSVLFSSTLVFGIFTG YLTGPRILSLAPSTLFLPPFLFALMFDNGIVPTPLLSLNRQSFFISFASVSVFLATSL ASIVLGSFSTAVSLLNIVHATGLYLHFQIILQLIKDKVFLVGESQSVYIGVTIILQSI FTLLFGYNPENSQNLQK" gene complement(1138226..1138298) /locus_tag="CRE_32622" /db_xref="WormBase:WBGene00187030" tRNA complement(1138226..1138298) /locus_tag="CRE_32622" /product="tRNA-Asn" /db_xref="WormBase:CRE32622" /db_xref="WormBase:WBGene00187030" gene <1139214..>1139707 /gene="Cre-htas-1" /locus_tag="CRE_29586" /db_xref="WormBase:WBGene00086097" mRNA join(<1139214..1139300,1139345..>1139707) /gene="Cre-htas-1" /locus_tag="CRE_29586" /product="CRE-HTAS-1 protein" /db_xref="WormBase:WBGene00086097" CDS join(1139214..1139300,1139345..1139707) /gene="Cre-htas-1" /locus_tag="CRE_29586" /note="contains similarity to Pfam domain PF00125 Core histone H2A/H2B/H3/H4; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A)" /codon_start=1 /product="CRE-HTAS-1 protein" /protein_id="EFP12315.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CRE29586" /db_xref="WormBase:WBGene00086097" /translation="MARTKNATPLPSPPGTPQHTTKAKAQSKKRTTRSKRAGLTFPVG RIHRKLQVATNGHRVSPGASVYLAAVLEYMTAEILEISGMVAEQSKRKTVTPRMMQLA VQQDNEFAEMFKDITISQGGVLPKPIHESLLPKKNASGQGTSAGGAP" gene complement(<1139845..>1142199) /gene="Cre-prmt-2" /locus_tag="CRE_29793" /db_xref="WormBase:WBGene00059937" mRNA complement(join(<1139845..1140070,1140119..1140381, 1140425..1140742,1140790..1140901,1140947..1141074, 1141122..1141299,1141344..1141455,1141501..1141884, 1141935..1142059,1142111..>1142199)) /gene="Cre-prmt-2" /locus_tag="CRE_29793" /product="CRE-PRMT-2 protein" /db_xref="WormBase:WBGene00059937" CDS complement(join(1139845..1140070,1140119..1140381, 1140425..1140742,1140790..1140901,1140947..1141074, 1141122..1141299,1141344..1141455,1141501..1141884, 1141935..1142059,1142111..1142199)) /gene="Cre-prmt-2" /locus_tag="CRE_29793" /note="contains similarity to Interpro domain IPR014644 (Protein arginine N-methyltransferase)" /codon_start=1 /product="CRE-PRMT-2 protein" /protein_id="EFP12429.1" /db_xref="InterPro:IPR014644" /db_xref="WormBase:CRE29793" /db_xref="WormBase:WBGene00059937" /translation="MFLEKINQKTGEREWVVAEEDYDMAQELARSRFGDMILDFDRND KFLEGLKTTIPEKKRENEDGKVHVLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDC ARHITGHSEWADKITVISERSTDVSQIGGSPADIIVAEVFDTELIGEGALRTFKEALQ RLAKPGCRVVPSSGNVYIAPVESHLLEMFNTIPRLNGAEDEHPLGNCSGTAAVFDVQL SEVKTHEFRELSDPIVAFKFDFEHEEKIIFDESFVRKATAHSSGTIDAILMWWDIDMD GTGKTFIDMAPKWKNPDNYAWRDHWMQAVYYLPQKKKVEMGQTFEIVCNHDEFSIWFS EVGKDTTRTYCVCGLHSMLSRQTVYHINEMFENHSFRAEVNRLSNNLHVTTVGEGSFL GLLAAKTAKKVTIIEGNERFRDIFYRYIQYYNLKNVEIIEKATNLTETPDIILAEPFY VSAMNPWSHLRFLYDVEVLRMLHGDELKVEPHVGTLKALPECFENLHKIAADVGTVNG FDLSFFDGISTKARAATDAIVDEQSLWEYAGTVKGETVELLNFPVDGKILSRKCAVRM EKMNSSNGIPIWMEWQFGNVTLSTGLLSVTDSGEPEWNKGYKQGVYFPISDLQNEQSL NLRALFDNSSGDITFQFSKV" gene complement(<1142594..>1143208) /gene="Cre-snx-3" /locus_tag="CRE_29794" /db_xref="WormBase:WBGene00059936" mRNA complement(join(<1142594..1142699,1142781..>1143208)) /gene="Cre-snx-3" /locus_tag="CRE_29794" /product="CRE-SNX-3 protein" /db_xref="WormBase:WBGene00059936" CDS complement(join(1142594..1142699,1142781..1143208)) /gene="Cre-snx-3" /locus_tag="CRE_29794" /note="contains similarity to Pfam domain PF00787 PX domain; contains similarity to Interpro domain IPR001683 (Phox-like); coded for by the following C. remanei cDNAs: DY525314" /codon_start=1 /product="CRE-SNX-3 protein" /protein_id="EFP12567.1" /db_xref="InterPro:IPR001683" /db_xref="PFAM:PF00787" /db_xref="WormBase:CRE29794" /db_xref="WormBase:WBGene00059936" /translation="MATGASATQRIPSKRQTLDEAYAPPANFLEIEVINPITHGVGKM RYTDYEIRMRVSTIIRNFVLQMSFQSNLPVFKQKESSVRRRYSDFEWVRAELERDSKI VVPTLPGKSFKRQLPFRSDDGIFEEEFIENRRKALELFINKVAGHPLAQNERSLHIFL QETTIDKNYVPGKIRTA" gene <1144062..>1148076 /gene="Cre-rad-54" /locus_tag="CRE_29587" /db_xref="WormBase:WBGene00059935" mRNA join(<1144062..1144987,1145033..1145114,1145161..1145404, 1145451..1145590,1145636..1145981,1146025..1146149, 1146190..1146308,1146353..1146430,1146477..1146603, 1146650..1146757,1146805..1146913,1146958..1147124, 1147168..1147556,1147592..1147654,1147708..1147819, 1147866..1147940,1147996..>1148076) /gene="Cre-rad-54" /locus_tag="CRE_29587" /product="CRE-RAD-54 protein" /db_xref="WormBase:WBGene00059935" CDS join(1144062..1144987,1145033..1145114,1145161..1145404, 1145451..1145590,1145636..1145981,1146025..1146149, 1146190..1146308,1146353..1146430,1146477..1146603, 1146650..1146757,1146805..1146913,1146958..1147124, 1147168..1147556,1147592..1147654,1147708..1147819, 1147866..1147940,1147996..1148076) /gene="Cre-rad-54" /locus_tag="CRE_29587" /note="contains similarity to Pfam domains PF00271 (Helicase conserved C-terminal domain), PF00176 (SNF2 family N-terminal domain), PF00855 (PWWP domain); contains similarity to Interpro domains IPR000330 (SNF2-related), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal), IPR000313 (PWWP)" /codon_start=1 /product="CRE-RAD-54 protein" /protein_id="EFP12469.1" /db_xref="InterPro:IPR000313" /db_xref="InterPro:IPR000330" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00176" /db_xref="PFAM:PF00271" /db_xref="PFAM:PF00855" /db_xref="WormBase:CRE29587" /db_xref="WormBase:WBGene00059935" /translation="MSSKTFHPGDFVWAKFPGFPPWPARVCSSSIYILLKTIYVQVMH CEQKRGKAHYTVEYFGSKEIGNVKYDEVDDYYEKRERFAKSKRVKGFNEAVDEIESLI DKTVLKIDTQAEHNHEYQEEDVQKGTTSAPQESPPVAQIQNEIKHEKPILSSDESDCS FDIQQIPVKSSPVETEKTSSQETKEDNIDVRKIPHLDSPVVVERARIAIDDDDDDFLE MLDENDGTILTEGTATVVVKKKTEMKTEKKVKKELVKIDLKPEVKTAEKEVTEMIPEV VEEPDIIEIPDVTPDIPSTSSSKRKRETSPENLPSTSSSSVPAQKRRSLGYSGKTTEP KNIHKSFVSPFGTSVSPTKQGLRRRKKAPPAIEPPVSVEEANPLRFVNIDVFSRRMAS ESSDHDAMIAKLLSRKFSIPMEGYMLSGRSLGLGGNRRKCALFDPYHEGALILYAPEL ISEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGVNIPEYHGCIMADE MGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMP VDSGKRELIIASLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHR LKNSDNLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFE NAILKGRDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEHIICCKN STLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVYEEFQKPDNR FRNKCLPVFPEAFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFM ALCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPSSTIFCFLLSSKAGGCGLNLIGANRL VMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVV SFKRYNNENSIYHFRNEQLRELFKLESTVASDTHEKLKCKRCIQGLESVDPPVNADCA SDLSNWFHSEKTARKVADNVLRAVFECGSISFVFHQKSHNVEAKKVEEKVEELDDDYV PSEAEEDD" gene complement(<1149702..>1152108) /gene="Cre-rsbp-1" /locus_tag="CRE_29795" /db_xref="WormBase:WBGene00059934" mRNA complement(join(<1149702..1149785,1150043..1150391, 1150881..1150969,1152067..>1152108)) /gene="Cre-rsbp-1" /locus_tag="CRE_29795" /product="CRE-RSBP-1 protein" /db_xref="WormBase:WBGene00059934" CDS complement(join(1149702..1149785,1150043..1150391, 1150881..1150969,1152067..1152108)) /gene="Cre-rsbp-1" /locus_tag="CRE_29795" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8QBQ3" /codon_start=1 /product="CRE-RSBP-1 protein" /protein_id="EFP12321.1" /db_xref="WormBase:CRE29795" /db_xref="WormBase:WBGene00059934" /translation="MRQHSMANPKKIQELVHECNVQLALFRVATQGIGTAQDGASLRR EVETAGRACQKAVEAANNVVLPQLRADGKYPFNHFQNSKISFSEAEIARHGSLFIGCV GAYLIEMKRCVKLEKTFPAPTEPSVTRQQVERVELILDTLENLITVHYSTNEQPCLDK LQVTPRRRRATSCRPQCVCSKLKTSYA" gene complement(<1154439..>1156375) /locus_tag="CRE_29796" /db_xref="WormBase:WBGene00059933" mRNA complement(join(<1154439..1154786,1154917..1154985, 1155061..1155190,1155239..1155300,1155348..1155548, 1155633..1155858,1155904..1156151,1156195..1156275, 1156322..>1156375)) /locus_tag="CRE_29796" /product="hypothetical protein" /db_xref="WormBase:CRE29796" /db_xref="WormBase:WBGene00059933" CDS complement(join(1154439..1154786,1154917..1154985, 1155061..1155190,1155239..1155300,1155348..1155548, 1155633..1155858,1155904..1156151,1156195..1156275, 1156322..1156375)) /locus_tag="CRE_29796" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8QBQ1; coded for by the following C. remanei cDNAs: DR777244" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12648.1" /db_xref="WormBase:CRE29796" /db_xref="WormBase:WBGene00059933" /translation="MEESHSAGIEIEEVETNENCGDPNQKGVKKRVAQTPPENDAKKP KLSREPSVEVITDSPLKNDTLSPKTPITPRTPKVTKDERERLKKEKLEEKEKQRLERE RILEEKRLEKEKLAEEKRLEKEKKEKERLEKKLEEERKKEEKRKELEEKKKEAEEKKR KDEEERMKKEEEKNRKKKEEEEKREAKRKEEEEKKEAKRREEEAIEEKKRRQSAKFFQ FFNKVEKKAPEPQKKFSSWYMPFQRKDGMTLAPILTRDPLPEDFDLFKQNKEITSLAN FLSTATKLVPVGPASKTKAKLFQFYDNRRPPYYGTWRKKAKSVKGSCPLAEETGIDYE ADSDDDWEDEPSDCEELNSDDEGEKDDEEDGEEDDGFFVPPCYLSDGEGEEETTSDGE NGENKKDKKPKRVEIDSDNDDDDSNDAERKARLAQRAEEWAKRTEKKKEMVLKPRAVG PVFHTGADQLPEFKNMYAAHFY" gene <1158107..>1158841 /locus_tag="CRE_29588" /db_xref="WormBase:WBGene00086157" mRNA <1158107..>1158841 /locus_tag="CRE_29588" /product="hypothetical protein" /db_xref="WormBase:CRE29588" /db_xref="WormBase:WBGene00086157" CDS 1158107..1158841 /locus_tag="CRE_29588" /note="contains similarity to Homo sapiens Similar to Suppressor protein SRP40; VG:OTTHUMP00000170311" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12706.1" /db_xref="WormBase:CRE29588" /db_xref="WormBase:WBGene00086157" /translation="MLIRCSKIGTSVYNRLLINSWENALEKVQWAWSCVAQIPDGTTV IRSVQSSSHSILYLRMSSFFFYLRNRSLTPFEQNCLDDHSRQMAQIMISTEEKFHVYE RLAKVHCSSGPSSSSSSIVPPFIANRAASISRSVSSGSSTTASSRSTPRSTSPYRVSL VANPFYDPSYKRYSPKATTASTPSSGSTPTSPLAAKLIANPFYDPSYVLSSSKPTSSD PTPSFIRLIPNPFYNPNYVINSQSPQ" gene complement(<1166277..>1167883) /locus_tag="CRE_29797" /db_xref="WormBase:WBGene00086129" mRNA complement(join(<1166277..1166461,1166634..1166774, 1167859..>1167883)) /locus_tag="CRE_29797" /product="hypothetical protein" /db_xref="WormBase:CRE29797" /db_xref="WormBase:WBGene00086129" CDS complement(join(1166277..1166461,1166634..1166774, 1167859..1167883)) /locus_tag="CRE_29797" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12551.1" /db_xref="WormBase:CRE29797" /db_xref="WormBase:WBGene00086129" /translation="MQNNKLYAEVPNDTNALLRYMTFYEKPELYSWICTIQKTDTCLD DFEKYRDLMIVSCIAFEISAFEEDSLKLSVGDCREARVSDCSFFNLSSLSLKAIISEN IRDIKKLQAMENIT" gene <1172457..>1176258 /gene="Cre-mef-2" /locus_tag="CRE_29589" /db_xref="WormBase:WBGene00059932" mRNA join(<1172457..1172510,1174213..1174325,1174845..1175270, 1175316..1175539,1176044..>1176258) /gene="Cre-mef-2" /locus_tag="CRE_29589" /product="CRE-MEF-2 protein" /db_xref="WormBase:WBGene00059932" CDS join(1172457..1172510,1174213..1174325,1174845..1175270, 1175316..1175539,1176044..1176258) /gene="Cre-mef-2" /locus_tag="CRE_29589" /note="contains similarity to Pfam domain PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain); contains similarity to Interpro domains IPR002100 (Transcription factor, MADS-box), IPR000104 (Antifreeze protein, type I)" /codon_start=1 /product="CRE-MEF-2 protein" /protein_id="EFP12560.1" /db_xref="InterPro:IPR000104" /db_xref="InterPro:IPR002100" /db_xref="PFAM:PF00319" /db_xref="WormBase:CRE29589" /db_xref="WormBase:WBGene00059932" /translation="MGRKKIQITRIQDERNRQVTFTKRKFGLMKKAYELSVLCDCEIA LIVFNSTNKLFQYASTDMDKVLLKYTEYNEPHESRTNNDIMEALNRKEGNQGGGGSDD ESPGPSTSPAIQIPIPTINGHTSNQSNSVASAASASAAAVAAAAAAVAAVEQQGTSSG AAAAAAALQASNAQRHHNLNLYQNLIFNPNYARHLPPRNEPLPSSSAAPSSSSSSSKH LDFPPSTSFAYDTSRLHPIAAADADCDLVPSSRAAENIWSTALQQRPVSQPAPSISNS SSNGLSNGTSSLLSPNISSLNGHSVLDLGGPIPPYKLDPNAYVKLEPHSPPQKRPRIT TEWRPQQLT" gene complement(<1177632..>1182852) /gene="Cre-gei-17" /locus_tag="CRE_29798" /db_xref="WormBase:WBGene00059931" mRNA complement(join(<1177632..1177777,1178058..1178196, 1178242..1178385,1178430..1178677,1178785..1179098, 1179617..1180092,1180173..1180266,1180317..1180411, 1180456..1180578,1181181..1181333,1182820..>1182852)) /gene="Cre-gei-17" /locus_tag="CRE_29798" /product="CRE-GEI-17 protein" /db_xref="WormBase:WBGene00059931" CDS complement(join(1177632..1177777,1178058..1178196, 1178242..1178385,1178430..1178677,1178785..1179098, 1179617..1180092,1180173..1180266,1180317..1180411, 1180456..1180578,1181181..1181333,1182820..1182852)) /gene="Cre-gei-17" /locus_tag="CRE_29798" /note="contains similarity to Pfam domain PF02891 MIZ/SP-RING zinc finger; contains similarity to Interpro domain IPR004181 (Zinc finger, MIZ-type)" /codon_start=1 /product="CRE-GEI-17 protein" /protein_id="EFP12411.1" /db_xref="InterPro:IPR004181" /db_xref="PFAM:PF02891" /db_xref="WormBase:CRE29798" /db_xref="WormBase:WBGene00059931" /translation="MQLLQYGSNGEMRRNQPAQRQHPYSRIGASNQMVNHHFQQQQQH QNMMHHMNHQHMLPNPMTIGKVFADRFETVSLPFYDVINTLLEPVELHATNSNSKQSK SLHFTFSMNADETAKIAYRSEATPVPRYEVQLRFFNITEPGTPQKDDFPLNCHARVDE SVASLPNIIPTNKPNVEPKRPSRPVNITSCLSRFKQRDHTLHVDWLSDRRVYAAGIYF VYRINSEMLFNRLVANVSRHRSAEVTRKEVINKLSGGEDDIAMDQLKISLLDPLSKIR VRTPVRCEDCTHSQCFDLLSYLMMNEKKPTWQCPVCSGYCPYERLIIDDYFLEVLAKV GSNIVEVELKPDGSYDVIKEEVDVCLSDDDDDEEDIKPNVNGSSMNGNGVSENGGKKK KVPADDEIITLSDDEEDEALKRGIQNSLNDNFTAERTGPSESSKKTPTKTGNNSDIEI ITLDDTPPRPSAASAPVRQLSQQHVNNMASSSSSRLDSVQSPNNGPVPQNLQTALSQI GSQSMPHSSQPSPMMQQQQIPTSHQMNYGPPPFMNMGQASGSQTPTSQYAYSPMMQPQ YQMQAGMIGRNNQMAPMQQHHQGPQGMMSPTFYAQQQMQNGNNIAPPRHLNRSEVSNG SQFAPPSRFGDTGPPGVTVRNHRRPPQSRQ" gene complement(<1183964..>1185672) /gene="Cre-nduf-7" /locus_tag="CRE_29799" /db_xref="WormBase:WBGene00059930" mRNA complement(join(<1183964..1184041,1184379..1184594, 1184933..1185132,1185567..>1185672)) /gene="Cre-nduf-7" /locus_tag="CRE_29799" /product="CRE-NDUF-7 protein" /db_xref="WormBase:WBGene00059930" CDS complement(join(1183964..1184041,1184379..1184594, 1184933..1185132,1185567..1185672)) /gene="Cre-nduf-7" /locus_tag="CRE_29799" /note="contains similarity to Pfam domain PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit; contains similarity to Interpro domains IPR006137 (NADH ubiquinone oxidoreductase, 20 kDa subunit), IPR014406 ([NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB), IPR006138 (NADH dehydrogenase (ubiquinone), 20 kDa subunit); coded for by the following C. remanei cDNAs: DY524607, DY525686" /codon_start=1 /product="CRE-NDUF-7 protein" /protein_id="EFP12651.1" /db_xref="InterPro:IPR006137" /db_xref="InterPro:IPR006138" /db_xref="InterPro:IPR014406" /db_xref="PFAM:PF01058" /db_xref="WormBase:CRE29799" /db_xref="WormBase:WBGene00059930" /translation="MLSALRTAGAFGTRRLASTQAIASNSEAPKGIATTGTPFLNPSS KAEYALARLDDVMNLAQRGSIWPLTFGLACCAVEMMHFAAPRYDMDRYGVVFRASPRQ ADLIFVAGTVTNKMAPALRRIYDQMPEAKWVISMGSCANGGGYYHYAYSVLRGCDRVI PVDIYVPGCPPTAEALLYGVLQLQKKIKRKREAQLWYRR" gene <1192919..>1196191 /gene="Cre-gld-4" /locus_tag="CRE_29590" /db_xref="WormBase:WBGene00059929" mRNA join(<1192919..1193086,1193329..1193496,1193543..1193686, 1193732..1193782,1193802..1195191,1195265..1195807, 1195881..1196119,1196171..>1196191) /gene="Cre-gld-4" /locus_tag="CRE_29590" /product="CRE-GLD-4 protein" /db_xref="WormBase:WBGene00059929" CDS join(1192919..1193086,1193329..1193496,1193543..1193686, 1193732..1193782,1193802..1195191,1195265..1195807, 1195881..1196119,1196171..1196191) /gene="Cre-gld-4" /locus_tag="CRE_29590" /note="contains similarity to Pfam domains PF03828 (Poly(A) polymerase), PF01909 (Nucleotidyltransferase domain); contains similarity to Interpro domains IPR002934 (Nucleotidyltransferase), IPR002058 (PAP/25A-associated)" /codon_start=1 /product="CRE-GLD-4 protein" /protein_id="EFP12343.1" /db_xref="InterPro:IPR002058" /db_xref="InterPro:IPR002934" /db_xref="PFAM:PF01909" /db_xref="PFAM:PF03828" /db_xref="WormBase:CRE29590" /db_xref="WormBase:WBGene00059929" /translation="MDEESRLSSSQPSTSSSGVPSDRSVVDSDTQKTSKAINKRQQAQ QQERPSTSKACKSENCEFGYTDALPFAPWRRKRYGLTVQGLHEEIVDMYHWIKPNEIE SRLRTKVYEKVRDSVLQRWKHKAIKISMFGSLRTNLFLPTSDIDVLVECEDWVGSSSD WLAETARGLEMDNIAESRTCPLSKWWIEIHGLALIFRSTLSKEFEQRHTLRRFVSEDF IHENFIRTWFFQVKEEFPLIEPLVLLLKQFLHYRNLNQTFTGGLSSYGLVLLLVNFFQ LYALNMRHRTIYDRGVNLGHLLLRFLELYSLEFNYEEMGISPGQCCYIPKSAAGARYG HKRAQPGNLALEDPLLTANDVGRSTYNFTSIANAFGQALQILMVAVTLRERKGRNQLA TKVYRGSLLHMIMPFTSKELTYRNWLMSGVLSVPCQDTPVTYDLNQLHNTLVSPMVDL SRYAWLRKTPSGAEKRDAKPLKITNPADDVKNQVLLQLKERMQKEKESQEAAAKKLKE EENSASLGAEVEDEDARPDALREQRDDNDNGLILTGPPLPTSTASVNTSATVSTAASI SEREDTDSPGLSSSLGAPSSEEDDDDSSMSNIRKTSDAGVVSIQFKKQFSEVVKTQKE FSKRTQTNFDDRKMEVGANGTQFGNINHFYPQQQPPSNRNFIDYAAAVASTCGTHKHR QTYAQRNRQSRNHSQGSDISDGYDVDRKNMNNNNQRGRRNVRAPSSSSNHSRQSSGSR SSGLNNHSYFPMPSSNDFQPRRSQHADATSTDESGNGSAMTSTSDEPRSPRMYADAVK KKSSVSTNTSADMNFANGNVPKNGVVSQSSASVASNTPNNERSYRNAVVVPTVSLSAP IPPVASCLPSQIHHNLRKDNECGLDTQSLTCHPNELSRQPQLISLANRSPR" gene complement(<1197478..>1198413) /locus_tag="CRE_29800" /db_xref="WormBase:WBGene00059928" mRNA complement(join(<1197478..1197585,1197639..1197912, 1197954..1198112,1198157..1198228,1198271..>1198413)) /locus_tag="CRE_29800" /product="hypothetical protein" /db_xref="WormBase:CRE29800" /db_xref="WormBase:WBGene00059928" CDS complement(join(1197478..1197585,1197639..1197912, 1197954..1198112,1198157..1198228,1198271..1198413)) /locus_tag="CRE_29800" /note="coded for by the following C. remanei cDNAs: DR406461" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12508.1" /db_xref="WormBase:CRE29800" /db_xref="WormBase:WBGene00059928" /translation="MADNSSSQNSSFSDDSFSSISSPPVTIRRPVDMTSPALLSSHSS PYPRDPNSSPFQIATPVIITPVETRSTRDLVRVNRLRRIRRNRESRAVLSSIRRRLSM VSLGENRTEIQLNTPRTLPRSRRIDKTSTAIELETSDTFEKILSLDEFPRNPSDVETA NVPSDSSNCAKMREINRLESINFAVMSLETDNEEEISEALNMLEWSIQLMNSETEMIN KILENFEEEKSKRIRKWEQIELILSIIHEEDNK" gene <1198655..>1199519 /locus_tag="CRE_29591" /db_xref="WormBase:WBGene00059927" mRNA join(<1198655..1199081,1199128..1199363,1199409..>1199519) /locus_tag="CRE_29591" /product="hypothetical protein" /db_xref="WormBase:CRE29591" /db_xref="WormBase:WBGene00059927" CDS join(1198655..1199081,1199128..1199363,1199409..1199519) /locus_tag="CRE_29591" /note="coded for by the following C. remanei cDNAs: DY525841" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12431.1" /db_xref="WormBase:CRE29591" /db_xref="WormBase:WBGene00059927" /translation="MNPGDRWNPGWQQFMMNQQRAQAGGNRHPQPQQLNQFGQQPRQN IELVSQFLHKIKLDMFRRNVQQRRNNAPPFVQNQNRRVHNRPNNNHNNAARREHRNPT REVLTRDDLERIETVSRKNYHTRTALEYNDREDQCWLNILNEIDEKSRQFTTAQNHNG GDILLPSEENICSNLRIENQNEVIMATRELLRNYGATEQELNGALKNLEIHLRTNALE YSFIEGISAELISNARKLTSEINELDDILRRIDKIRLQK" gene complement(<1199673..>1200429) /gene="Cre-clec-91" /locus_tag="CRE_29801" /db_xref="WormBase:WBGene00059926" mRNA complement(join(<1199673..1199856,1199903..1200272, 1200315..>1200429)) /gene="Cre-clec-91" /locus_tag="CRE_29801" /product="CRE-CLEC-91 protein" /db_xref="WormBase:WBGene00059926" CDS complement(join(1199673..1199856,1199903..1200272, 1200315..1200429)) /gene="Cre-clec-91" /locus_tag="CRE_29801" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain; contains similarity to Interpro domains IPR016186 (C-type lectin-like), IPR001304 (C-type lectin); coded for by the following C. remanei cDNAs: DR407192, DR781532, DR775599, DR781707" /codon_start=1 /product="CRE-CLEC-91 protein" /protein_id="EFP12373.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00059" /db_xref="WormBase:CRE29801" /db_xref="WormBase:WBGene00059926" /translation="MTTLRFIIFTLFVYGVTSDNTTDGPYILALSDEQPHQRLQFYNW DHKDLGTNAFEDLPPLAEQPTPLPINQTEKCPDGWVRFSDSCYFYETELLGFAKAERK CYDKQATLFVANSFEEWDLVRTRTEKSHFSWIGLVRFSHFERSEQLPRWQTTGSINPS KLNWIIKPFNPIANGWSSIANCAATYQSPSPVESTSYTYFYPCTLLLNSICERNSTIV NARN" gene <1205236..>1206674 /gene="Cre-mel-26" /locus_tag="CRE_29592" /db_xref="WormBase:WBGene00059925" mRNA join(<1205236..1205808,1205859..1206047,1206100..1206357, 1206409..1206516,1206573..>1206674) /gene="Cre-mel-26" /locus_tag="CRE_29592" /product="CRE-MEL-26 protein" /db_xref="WormBase:WBGene00059925" CDS join(1205236..1205808,1205859..1206047,1206100..1206357, 1206409..1206516,1206573..1206674) /gene="Cre-mel-26" /locus_tag="CRE_29592" /note="contains similarity to Pfam domains PF00651 (BTB/POZ domain), PF00917 (MATH domain); contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ), IPR013089 (Kelch related); coded for by the following C. remanei cDNAs: DT936025, DT933799" /codon_start=1 /product="CRE-MEL-26 protein" /protein_id="EFP12412.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="InterPro:IPR013089" /db_xref="PFAM:PF00651" /db_xref="PFAM:PF00917" /db_xref="WormBase:CRE29592" /db_xref="WormBase:WBGene00059925" /translation="MEPQADAVFIGGVGNAGNEMSTVGVPALGVSSQTEIKVEKVQHT WTVKNFSHCYQEYLENFVYLQRGDEQLTWSIKIYPKGNGENNKDFVFLCLNRVINNNV KAGKIGFKSQFKLRTAENKDIEVILIPLENNHCSYFQMRIHPNPSHSDYVSYIKRDVL FPQIMPRDMIIVNVEIDVAVETITTTNEPIQFEPVNTELQLVEDYQRLFSQELLTDFE ININGKIIRAHKAVLAARSPVFNAMLTHQDTDESRSSTLYIKDMDYDVIYEMVYYIYC GRCQKDITDMATALLIAADKYRLEELKSHCEKYLVENINIENACSLLIIGDLYTAPKL RRRSVQFILARPKMVTGTQGWDDILKCHPNLITDIFSQIDRQSSTGATSSVSTLPGIP MEIPGLPGNLGPPPSGL" gene complement(<1207293..>1208937) /locus_tag="CRE_29802" /db_xref="WormBase:WBGene00059924" mRNA complement(join(<1207293..1207442,1207487..1207603, 1207651..1207813,1207863..1207954,1208000..1208074, 1208124..1208243,1208287..1208702,1208749..1208852, 1208897..>1208937)) /locus_tag="CRE_29802" /product="hypothetical protein" /db_xref="WormBase:CRE29802" /db_xref="WormBase:WBGene00059924" CDS complement(join(1207293..1207442,1207487..1207603, 1207651..1207813,1207863..1207954,1208000..1208074, 1208124..1208243,1208287..1208702,1208749..1208852, 1208897..1208937)) /locus_tag="CRE_29802" /note="contains similarity to Pfam domain PF05154 TM2 domain; contains similarity to Interpro domain IPR007829 (TM2)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12674.1" /db_xref="InterPro:IPR007829" /db_xref="PFAM:PF05154" /db_xref="WormBase:CRE29802" /db_xref="WormBase:WBGene00059924" /translation="MGNETVEVKPWIVRLILIVGGLFGAHRLYLKQVPEAFVFFSTLG VVLIGWLYDSFMFKYEVNAYNQLIKQSDDNKEKEKWKSVVSEKSPKPILPVFRNGKLQ LAQSRFVEFSFTRFLYSVLYGSYIGLATWLACTVTFGWTDINLIPFICVVALGITAGI YIIGQCGEQSRELSYIWLASFSSMFIMVRLAQTTVFRAIFLTAIVSTVIGNRSAKIKR RRHTWKHFLFWSSLFMMLVCVILLGCSRKVADKQVTATRPGTFRETTSVGSLLRDRVF DPKKVHSFFEGNPIIEYHSKSDSKSKPPTKNHKNVSFWQQVWSGELFDELTGAAHLTK IDWIELTTTFIVDVLRAEARVIDKSSTVEPFKWALWRNYLIHRFSLDPLTSDDRLRAE CKKWQKEQKSKRGNEEKDYKILAAKQGCSTFQS" gene complement(<1209424..>1211711) /locus_tag="CRE_29803" /db_xref="WormBase:WBGene00086128" mRNA complement(join(<1209424..1209526,1209574..1209655, 1209710..1209884,1209938..1210419,1210466..1210669, 1210722..1211197,1211243..1211502,1211589..>1211711)) /locus_tag="CRE_29803" /product="hypothetical protein" /db_xref="WormBase:CRE29803" /db_xref="WormBase:WBGene00086128" CDS complement(join(1209424..1209526,1209574..1209655, 1209710..1209884,1209938..1210419,1210466..1210669, 1210722..1211197,1211243..1211502,1211589..1211711)) /locus_tag="CRE_29803" /note="contains similarity to Pfam domain PF02990 Endomembrane protein 70; contains similarity to Interpro domain IPR004240 (Nonaspanin (TM9SF)); coded for by the following C. remanei cDNAs: DY528893, DR779341, DR408291, DY527196, DY528375, DT933999" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12546.1" /db_xref="InterPro:IPR004240" /db_xref="PFAM:PF02990" /db_xref="WormBase:CRE29803" /db_xref="WormBase:WBGene00086128" /translation="MTLLRFGTLLVLATILPLEQGFYVPGVAPVDFRAGDAIDVKAIK LTSSSNIMPFEYYSVPFCKPTDGDIQYKSENLGEVMRGDRIVNTPYRFQMKKNEQCLT LCSNKLSKEDVLLFKERIRQEYSAHMIVDNLPVATVISPGKSGDIYYDLGYRLGWIDE NAKVFLNNHLQFVVKYHQHTPGLYRFVLSFICYTCKKFFRVVGFEVRPRSITATKNSD STCSLPEDGGRHVELGDAEQTIEFSYSVTFEESDVPWASRWDVYLTTKAVDIHWFSIL NSIVVVLSLSGFLSVTIVRTVRRDIAQYNRDDEEDDTLEETGWKLVHGDVFRPPPHQM ILVNMVGTGIQLLGMSAIVVVCAMLGMLSPASRGSLMSAAVFLFCFMGLISGYHAGRL YKTMKGRNPIRCAVQTATLFPSLILGAGFLLNFFLIGKHSSGAVPFGTMIALLVMWFC IDMPLIFLGFYFGYRKQPYTHPVRTNQIPRQVPEQPWYLRLIPSSLIAGVLPFGAMFI ELFFIFNAIWENQFYYLFGFLFIVSIILAISTAQISVVATYFSLCAENYRWWWRSFVI SGGSSFYVMAYAVFYYNTKLTIEGFVPTVLYFGYSSLIALTFFFMTGTIGFYASHFFL TKIYAAVKID" gene complement(<1212474..>1214344) /locus_tag="CRE_29804" /db_xref="WormBase:WBGene00059922" mRNA complement(join(<1212474..1212644,1212692..1212889, 1212937..1213128,1213174..1213399,1213445..1213822, 1214149..1214231,1214276..>1214344)) /locus_tag="CRE_29804" /product="hypothetical protein" /db_xref="WormBase:CRE29804" /db_xref="WormBase:WBGene00059922" CDS complement(join(1212474..1212644,1212692..1212889, 1212937..1213128,1213174..1213399,1213445..1213822, 1214149..1214231,1214276..1214344)) /locus_tag="CRE_29804" /note="contains similarity to Pfam domain PF04189 Gcd10p family; contains similarity to Interpro domains IPR007316 (Eukaryotic initiation factor 3, gamma subunit), IPR017423 (tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit); coded for by the following C. remanei cDNAs: DR409434" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12521.1" /db_xref="InterPro:IPR007316" /db_xref="InterPro:IPR017423" /db_xref="PFAM:PF04189" /db_xref="WormBase:CRE29804" /db_xref="WormBase:WBGene00059922" /translation="MEAETPPQTSSCINSGEYLIVQKIDGEQSRIVRFTPKQKILIEK LKFTADSAFGKPHGLFEVSNNQCFPMSVDRLIEELQLQEAPVATSVIDTEVITFETVE VSDPRVVIAPSALKLEPEQKRQKLEMDAVLEMKKQGVSGQDLVAKLVEGSASFQTRTV FSQSKYIKRKAKKHSDRVLILRPTIRLLAKAYYLKDPDRLAMLRADQLALILQMAGVH HGKNVIVFEQTLGLITSAVIERLGGKGGCVHIHRGAVAQSIPCVHSMNYDEKTLSTFL PVRIKCILAEKQLPYETNRRPFDDEAENGGVEHKAAEKIEDQDLEVLARRNERLDKEK RGLEMISEQKAHSLIIGSRTVDPISVLELVYPKLAPSASIVIYSPHQNILVSAYDWLA KRQTINLVLTDQMCRVMQVLPDRTHPLMAQHVAGGHVLSGIKVVDQ" gene <1216986..>1219375 /locus_tag="CRE_29593" /db_xref="WormBase:WBGene00059921" mRNA join(<1216986..1217188,1217609..1217699,1217750..1217838, 1217886..1217978,1218028..1218112,1218157..1218327, 1218372..1218661,1218848..1219026,1219073..1219214, 1219261..>1219375) /locus_tag="CRE_29593" /product="hypothetical protein" /db_xref="WormBase:CRE29593" /db_xref="WormBase:WBGene00059921" CDS join(1216986..1217188,1217609..1217699,1217750..1217838, 1217886..1217978,1218028..1218112,1218157..1218327, 1218372..1218661,1218848..1219026,1219073..1219214, 1219261..1219375) /locus_tag="CRE_29593" /note="contains similarity to Pfam domain PF01490 Transmembrane amino acid transporter protein; contains similarity to Interpro domain IPR013057 (Amino acid transporter, transmembrane)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12669.1" /db_xref="InterPro:IPR013057" /db_xref="PFAM:PF01490" /db_xref="WormBase:CRE29593" /db_xref="WormBase:WBGene00059921" /translation="MSTTEEQKILIELETMPFIVGPTENGQERKQQQFDDLRMKDVGG RVQNGHSDTKSVMSTVISRKNGISATSGLINFICGMIGPGCFSLAVSFKQAGLWGGLA LVFIVGFLSLYSMHKIVSCSQFLAKSNGDQSLDYGEMAEAAMLNSYRWARRHAKLAKI VVNACLLAFQLGVITVFMVFAVEHVIEIWEFIADSPPPFSKSVIILMYFVPQMLLNFI GHMKLITILCLCGNVIIFAAIVLITKELMMHKWYPTWELNSVTGIEGISLAAGALIYS FEGQAMVLPLENSLKRPKDMTGMTGVLSTAMNLVTVLYAFLGFFGYVTFGPTVQGSLT LNLPNSVLTVSIKGLLVLKIFFGSAIQLFVIVQMLLPSLRSKISEDRKMIHRFLPYAL RLGLMLVSLCLALVVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVYKKQGEIFK YYQKMIINLFLFVLGWLFLGSGLYSSIDDIINNDV" gene complement(<1220529..>1220790) /locus_tag="CRE_29805" /db_xref="WormBase:WBGene00059920" mRNA complement(join(<1220529..1220626,1220676..>1220790)) /locus_tag="CRE_29805" /product="hypothetical protein" /db_xref="WormBase:CRE29805" /db_xref="WormBase:WBGene00059920" CDS complement(join(1220529..1220626,1220676..1220790)) /locus_tag="CRE_29805" /note="coded for by the following C. remanei cDNAs: DR777506" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12361.1" /db_xref="WormBase:CRE29805" /db_xref="WormBase:WBGene00059920" /translation="MPNYSILCIMAIVFLLSATVNSQLFGGWSQPAWGYSAQGVGVDQ YGNTFEGTPQNGIYLFCNGHGCPGRG" gene <1221436..>1222887 /gene="Cre-eif-3.E" /locus_tag="CRE_29594" /db_xref="WormBase:WBGene00059919" mRNA join(<1221436..1221525,1221576..1221851,1221908..1222384, 1222432..>1222887) /gene="Cre-eif-3.E" /locus_tag="CRE_29594" /product="CRE-EIF-3.E protein" /db_xref="WormBase:WBGene00059919" CDS join(1221436..1221525,1221576..1221851,1221908..1222384, 1222432..1222887) /gene="Cre-eif-3.E" /locus_tag="CRE_29594" /note="contains similarity to Pfam domains PF09440 (eIF3 subunit 6 N terminal domain), PF01399 (PCI domain); contains similarity to Interpro domains IPR016650 (Translation initiation factor 3, subunit 6, eukaryotic), IPR000717 (Proteasome component region PCI); coded for by the following C. remanei cDNAs: DT936915" /codon_start=1 /product="CRE-EIF-3.E protein" /protein_id="EFP12561.1" /db_xref="InterPro:IPR000717" /db_xref="InterPro:IPR016650" /db_xref="PFAM:PF01399" /db_xref="PFAM:PF09440" /db_xref="WormBase:CRE29594" /db_xref="WormBase:WBGene00059919" /translation="MSTFDLTQRMAPFLDMHLIIPLLEFIEPRGIYDEKSLTEMHRQL LSKTNMIDSVIETYNGKPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIPEVKEMMD NNRERDGNVRILEHLTQNHNFTVDMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQ ADPNYLNALYGKLASEILLQEWEHARDDLLKLRAYIDANPFDTEWELVTQRAWLMHWA LFVYYNYPKGRDEIIEMFLNQQPYLNAIQVLAPHLLRYLAVAVVTSKSRQKNSLKDLV KVIDIERHSYKDPVTDFLTCLYIKYDFDEAQEMLQKCEEVLSNDFFLTAVLGDFRESA RLLIFEMFCRIHQCITIEMLARRLNMSQEEAERWIVDLIRTYRIEGAKIDSKLGQVVM GVKSVSIHEQVMENTKRLTLRAQQIALQLEKGRQDKVKAN" gene <1223790..>1226035 /gene="Cre-tag-264" /locus_tag="CRE_29595" /db_xref="WormBase:WBGene00059918" mRNA join(<1223790..1224860,1224911..1225523,1225587..>1226035) /gene="Cre-tag-264" /locus_tag="CRE_29595" /product="CRE-TAG-264 protein" /db_xref="WormBase:WBGene00059918" CDS join(1223790..1224860,1224911..1225523,1225587..1226035) /gene="Cre-tag-264" /locus_tag="CRE_29595" /note="contains similarity to Pfam domain PF07147 Mitochondrial 28S ribosomal protein S30 (PDCD9); contains similarity to Interpro domain IPR010793 (Ribosomal protein S30, mitochondrial)" /codon_start=1 /product="CRE-TAG-264 protein" /protein_id="EFP12578.1" /db_xref="InterPro:IPR010793" /db_xref="PFAM:PF07147" /db_xref="WormBase:CRE29595" /db_xref="WormBase:WBGene00059918" /translation="MLVHRVQCTHYHHQLDFHARVVAHVLHVSLTTIYHCCSMRMIHH NKQLEVIMALQLHPTLLNLQMLIFIVRFELEIFKIHHHVLQPLRAIKLPVLEDHHRIL DLTDTNVQIPCFQFISPYVYAASRTINCTVSHIFRFAFMDSHTVESRFYLFSVLSRTI LIISDSFSSRIFAMHGLKRTFLIRTVCRGKASTAADLPQSSQDLEQTNQEDTPVKTAN ASTVYRPPYYRKPHKHHEPKHMLQEEFTNAGDASGAGVRLFDYFKTAEMVNSMPTIKE KIDLVSPYERPWTRAEKTWRRDWHPTLMATRKAWGIPPTPAHFDTLDYYKYLTKTRVE NKLLDDFYQGLRPPTADLQNSFQNTMKSMNFGDGLNFSDEDTQKLFGSLIDDAMGGIA HNVSRLSDHRVAYDVESEAFWIRSGFMFLYDELDISTKKDTRRLNNFPKYIGDDRRKL GELAFVHRDKLAAQVRSKEPSAPLFSLDSEDAKLPVFDADNNIQETLFSPKVYNLWPD QEPLWQCPGYHADSGETHTYGVLSVKSLRPLRKRISHWMGWENENELDDCEEAKQMLD DGARSQAVISMFSTLCAQAHTHGFTQYTDITRPFTSQMILSDGLNFYFAVGQLNTLAI NVECDGFVNPRTNFIQIEGPHRLFDHYDPKEGDYQSVREDLDVENKVQVIIFYFSCVM SHLFLQRRAASGLNEKVLERVTQMLMKQ" gene <1226258..>1227545 /locus_tag="CRE_29596" /db_xref="WormBase:WBGene00059916" mRNA join(<1226258..1226379,1226427..1226723,1226768..1226986, 1227042..1227324,1227369..>1227545) /locus_tag="CRE_29596" /product="hypothetical protein" /db_xref="WormBase:CRE29596" /db_xref="WormBase:WBGene00059916" CDS join(1226258..1226379,1226427..1226723,1226768..1226986, 1227042..1227324,1227369..1227545) /locus_tag="CRE_29596" /note="contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase; contains similarity to Interpro domain IPR004843 (Metallophosphoesterase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12458.1" /db_xref="InterPro:IPR004843" /db_xref="PFAM:PF00149" /db_xref="WormBase:CRE29596" /db_xref="WormBase:WBGene00059916" /translation="MLWFKVLGPPIFLTAALIFYNEYFIFYNAFSNCEWPCKHGKCAE SSLKSFMISDTHLLGRINGHWLDKLKREWQMYQSFWISSWVHNPDVVFFLGDLMDEGK WAGSPLFSTYADRFRQLFGDGKTVITLAGNHDIGFHYAVMPDTLDLFRKEFRRGLIDD IEIKGHRFILINSMALHGDGCRLCHEAEVELEKIKRKKSKKRPIVLQHFPLYRKSDAD CEKVDDLHEIDLKEQYREQWDTLSKDSSAKLIKTLNPLAVFGGHTHKMCKRKWPKPDN SGYFSEYTVNSFSWRNGDIPSLLLAVIDGDDVLVNSCRLPSEMTQISVYVVGGVAILI VTIVLAVKRRVIFKRRCSYSLLMYRSQEKCD" gene <1228783..>1229790 /locus_tag="CRE_29597" /db_xref="WormBase:WBGene00059915" mRNA <1228783..>1229790 /locus_tag="CRE_29597" /product="hypothetical protein" /db_xref="WormBase:CRE29597" /db_xref="WormBase:WBGene00059915" CDS 1228783..1229790 /locus_tag="CRE_29597" /note="contains similarity to Pfam domain PF00646 F-box domain; contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12354.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CRE29597" /db_xref="WormBase:WBGene00059915" /translation="MSSTSFPLMELPLLPLSILLKSMPLESLIPLSETNQRFKQFIQL LHIKSGGYHVDIDECRFKISMLKQNFRCSFQEENKSFLLRNLSETLHKMRELFPGPID QLSICPSFSNYFYDINMECTVLSVGLDPHFMIEYRNTFTEEYLNALLNSVNFKKGLSL RGPILLRTQHEKIFDIDWLKIKCSEWITTAILQKMKNTVIYLADVSFSDKEINEFLHD LKNGNGNNQLQVLTFEKEGGLNEMEIIRGLNAIEMKEERVYKISEFDPSIQNDRFLPF NSGGEISIFNSFDFIRNDGIRCTIEFDYEVIQLFVWNQEKDKKTTRNEAFSIPPAKRI L" gene complement(<1230212..>1231282) /locus_tag="CRE_29806" /db_xref="WormBase:WBGene00059914" mRNA complement(join(<1230212..1230380,1230426..1230767, 1230816..>1231282)) /locus_tag="CRE_29806" /product="hypothetical protein" /db_xref="WormBase:CRE29806" /db_xref="WormBase:WBGene00059914" CDS complement(join(1230212..1230380,1230426..1230767, 1230816..1231282)) /locus_tag="CRE_29806" /note="contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger); contains similarity to Interpro domain IPR001841 (Zinc finger, RING-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12697.1" /db_xref="InterPro:IPR001841" /db_xref="PFAM:PF00097" /db_xref="WormBase:CRE29806" /db_xref="WormBase:WBGene00059914" /translation="MIDRVIAQNIHNGDNQETQLATPQAPGIAPQHAAPIQMLFPDDE SDSDDDVAVVIRPQPEARAVSPPRSRVVPASSSSDDGSIVDTGRRTYHDRPIAVTGPR VQSRSGPIRRRSSRQAAARRNNATHAPVPRGRVRTFSDHISASRGVLHPSTMGRDAGI NVHPIVHIVVPSDGSSDEDTFYNRLRVVPIGGVRVSTNPIPEVRIPRAGMYASNDPNR PYRRLARSPVRFGTPFRVGTPVTTWGNCTMCFDSPIDPQGCNRCQQILGCKTCVNSWF ESSESPSCPLCRRKWARKPDVARMTTIDKRKTAKATRRVPRRSRRSQVV" gene complement(<1231697..>1233572) /locus_tag="CRE_29807" /db_xref="WormBase:WBGene00059913" mRNA complement(join(<1231697..1232055,1232107..1232545, 1232589..1233415,1233512..>1233572)) /locus_tag="CRE_29807" /product="hypothetical protein" /db_xref="WormBase:CRE29807" /db_xref="WormBase:WBGene00059913" CDS complement(join(1231697..1232055,1232107..1232545, 1232589..1233415,1233512..1233572)) /locus_tag="CRE_29807" /note="contains similarity to Pfam domain PF00225 Kinesin motor domain; contains similarity to Interpro domain IPR001752 (Kinesin, motor region); coded for by the following C. remanei cDNAs: DR406272, DT937424" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12563.1" /db_xref="InterPro:IPR001752" /db_xref="PFAM:PF00225" /db_xref="WormBase:CRE29807" /db_xref="WormBase:WBGene00059913" /translation="MFARRRSGVHRTAIVSPKNIARRTTMRASALPRPTEPLPNTLTT GRHSTLGHTGCPTLRAPIGSHPRVSTAAKPTPTTSRAGSTSSARSTTLRSSSVANKTI AAPTARTSNMARAVPVSSRLPSEVASLKSEITKLKEELKTRVEQIKLTNEVLEMQKTN LTHSNAQLENAKIKLDLVENCKITLEEQLKVLKVNMQQKTAHNEEMCQQLNEKEATLR KLHNDVVDMRGQIRVAVRVRPMLKAEEESSNDGIEYPAVNAIAINQGTKKGTTLMFEK VFTPLFSQKDVFVNIEDFILSALHGYNVGLIAFGQTGSGKTHTMRGGDAEEEEGIIPR AATFLFRESKKLEATGWKFEFSLSFLEIYNNEAYDLLNNHAAVKLRLVNQTVTLDGLS DHPLAKQSEIGSLLRTADKNRKTAATKCNEYSSRSHAIYMWKIKAHQQATGISTSSML KLVDLAGSERAKESGVIGQQFKEMTNINQSLSVLQKCISLQKSKSQHVPYRDSKLTQV LMDCLGAGNSKTMVVVNINPCNDQATESKRSIEFASKMRETHIGSAVQQRDLY" gene <1234394..>1235085 /locus_tag="CRE_29598" /db_xref="WormBase:WBGene00059912" mRNA join(<1234394..1234544,1234600..1234920,1234967..>1235085) /locus_tag="CRE_29598" /product="hypothetical protein" /db_xref="WormBase:CRE29598" /db_xref="WormBase:WBGene00059912" CDS join(1234394..1234544,1234600..1234920,1234967..1235085) /locus_tag="CRE_29598" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12572.1" /db_xref="WormBase:CRE29598" /db_xref="WormBase:WBGene00059912" /translation="MRTLHKISTDEISVKQGGFFLKVTNLSKNTNNVCFRIGKDISLS FMFIAFENPRMTDGLVPPPTLKWNLETIATCVAIILVMVVNIIGLVFTIFWCLRSKED GIELGINGAPVNQFVEPNIRMKLKLPKVRGDAVLDSTQDVFELRVPSNGNQFNACHEQ TVIVARNKRRRTYSVPLESRPRTQSTGSHQLTATEV" gene <1235443..>1236529 /locus_tag="CRE_29599" /db_xref="WormBase:WBGene00059911" mRNA join(<1235443..1235547,1235594..1235647,1235694..1235793, 1235839..1236011,1236053..>1236529) /locus_tag="CRE_29599" /product="hypothetical protein" /db_xref="WormBase:CRE29599" /db_xref="WormBase:WBGene00059911" CDS join(1235443..1235547,1235594..1235647,1235694..1235793, 1235839..1236011,1236053..1236529) /locus_tag="CRE_29599" /note="contains similarity to Pfam domain PF00498 FHA domain; contains similarity to Interpro domain IPR000253 (Forkhead-associated); coded for by the following C. remanei cDNAs: DT934845, DR408982" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12333.1" /db_xref="InterPro:IPR000253" /db_xref="PFAM:PF00498" /db_xref="WormBase:CRE29599" /db_xref="WormBase:WBGene00059911" /translation="MEEADEKSKFQVPSWAVKPPDGAHLDVYKGDALIQKLLIDDKKA YYFGRNNKQVDFAVEHASCSRVHALLLYHGLLQRFALIDMDSSHGTFLGNVRLRPLEV VFMDPGAQFHLGASTRKYAVRLKTEHHIEDDPTVAASEEQLDHQTSYNTAQNRRIPQL PISVEEARRKKRPRGNVAFLEEEEVINPEDVDPTVGRFRNLVTTAIISTNPNKRPGDP KRLEPPRKIVRPGREMITAPLSSTFGPMALNAAPDLELYGKTMPESRHHQYVTATAAE EDLEDHHKKRYAKEAWPGRKPGTGIF" gene complement(<1236764..>1238077) /gene="Cre-cutl-14" /locus_tag="CRE_29808" /db_xref="WormBase:WBGene00059910" mRNA complement(join(<1236764..1237017,1237071..1237212, 1237261..1237332,1237379..1237575,1237622..1237690, 1237999..>1238077)) /gene="Cre-cutl-14" /locus_tag="CRE_29808" /product="CRE-CUTL-14 protein" /db_xref="WormBase:WBGene00059910" CDS complement(join(1236764..1237017,1237071..1237212, 1237261..1237332,1237379..1237575,1237622..1237690, 1237999..1238077)) /gene="Cre-cutl-14" /locus_tag="CRE_29808" /note="contains similarity to Pfam domain PF00100 Zona pellucida-like domain; contains similarity to Interpro domain IPR001507 (Endoglin/CD105 antigen)" /codon_start=1 /product="CRE-CUTL-14 protein" /protein_id="EFP12423.1" /db_xref="InterPro:IPR001507" /db_xref="PFAM:PF00100" /db_xref="WormBase:CRE29808" /db_xref="WormBase:WBGene00059910" /translation="MIFFYLPALFLFCHQISAIPIPNGLLGNVEVECTDTTIEAVFLT ESNFLGRVFVLGHSQDKECVSREIGRRTTSITVPRDKCGVETVQHGKGAGYTSSVNIV ISFHDKFLTKVDRAYNITCLFAPTGDVVSYALTVQPSLLKDIQVLADQPNCEYEVFDV RTRRPAEVVHVNAPLEHVWTCDGANLDLFCMRVHDCVINEGKSKRRSRIIDSEGCSLD TSRLPQLRYDNNKLSARVMSKAFRFGDDVAVEFECNVRLDLRNGTSCPRPRC" gene complement(<1238679..>1240871) /locus_tag="CRE_29809" /db_xref="WormBase:WBGene00059909" mRNA complement(join(<1238679..1238756,1238806..1238907, 1239066..1239182,1239384..1239722,1239771..>1240871)) /locus_tag="CRE_29809" /product="hypothetical protein" /db_xref="WormBase:CRE29809" /db_xref="WormBase:WBGene00059909" CDS complement(join(1238679..1238756,1238806..1238907, 1239066..1239182,1239384..1239722,1239771..1240871)) /locus_tag="CRE_29809" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain); contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal); coded for by the following C. remanei cDNAs: DY526183, DY527256, DR781700" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12393.1" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="PFAM:PF00270" /db_xref="PFAM:PF00271" /db_xref="WormBase:CRE29809" /db_xref="WormBase:WBGene00059909" /translation="MGIDVKKKVLKRKLKQMKDGHEKKKAKEVVEEQPMEEDEEDDVE EQKAESEETSGTKVSEFLTKTTFASLEGKVNATLLKAVQGLGFTTMTEIQAKSIDPLL EVSHFPSLSINFICFSSSFDNFFQGKDVLASAKTGSGKTLAFLIPAIELLHKLNWKQH NGTGIIIVSPTRELSMQTYGVLAELLEGSNLTYGLVMGGSNRSAEKDKLGKGVSILVA TPGRLLDHLQNTDNFLVRNLKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSA THSPKVDELVKLALHSNPVRVSVNEKAEEATVEGLQQGYIVAPSDKRLLLLFTFLKKN KTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQAESGILLC TDVAARGLDIPAVDWIVQYDPPDEPREYIHRVGRTARGTNGSGKALLVLRPEELGFLR YLKAAKVTLNEFEFSWNKVIFKLAKTDPYFVANIQSQLENLISKNYYLNKSAKEAYKC YLRAYDSHSLKDIFDVTNMDLTAVSKSFGFSVPPFVDLPISNKPKVEVRSKLSGAGYR KKKPSFTFKTKK" gene complement(<1241024..>1241586) /locus_tag="CRE_29810" /db_xref="WormBase:WBGene00059908" mRNA complement(join(<1241024..1241164,1241208..1241357, 1241410..>1241586)) /locus_tag="CRE_29810" /product="hypothetical protein" /db_xref="WormBase:CRE29810" /db_xref="WormBase:WBGene00059908" CDS complement(join(1241024..1241164,1241208..1241357, 1241410..1241586)) /locus_tag="CRE_29810" /note="contains similarity to Pfam domain PF01951 Protein of unknown function DUF101; contains similarity to Interpro domain IPR002804 (Protein of unknown function DUF101)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12420.1" /db_xref="InterPro:IPR002804" /db_xref="PFAM:PF01951" /db_xref="WormBase:CRE29810" /db_xref="WormBase:WBGene00059908" /translation="MPSTSMTEDRSEIERRRFEYLDHPADIQLHSWGSKIEEAFEACL VSMFGYMTDLAKVEEQYEFYWKASGDSMDGLLFQFLDEALNSFHAEPCFVAKRVEILR FDKEKFEIEFRGWGESFDTSKHETEADIKSPTYSNMQIIEKLDRCDVYVIVDI" gene complement(<1242023..>1242905) /locus_tag="CRE_29811" /db_xref="WormBase:WBGene00059907" mRNA complement(join(<1242023..1242385,1242433..1242772, 1242823..>1242905)) /locus_tag="CRE_29811" /product="hypothetical protein" /db_xref="WormBase:CRE29811" /db_xref="WormBase:WBGene00059907" CDS complement(join(1242023..1242385,1242433..1242772, 1242823..1242905)) /locus_tag="CRE_29811" /note="contains similarity to Pfam domain PF09174 Maf1 regulator; contains similarity to Interpro domains IPR017152 (RNA polymerase III transcriptional repressor, MAF1), IPR015257 (Maf1 regulator)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12558.1" /db_xref="InterPro:IPR015257" /db_xref="InterPro:IPR017152" /db_xref="PFAM:PF09174" /db_xref="WormBase:CRE29811" /db_xref="WormBase:WBGene00059907" /translation="MKFLESSEMDVFSQTLVTGAIDCVIDFKLETYSSKMVTSEKKQW KSNDKSVIWDERQPLGSYEETVMSASPSVGHNHRLRHLSERSCSGGSDNDFDNNDYLI KDSISRKRLYDLTQVLNCSFPDHDFTNANSEAFALVNYTDLSRLVDMKLETIVRDYHI RREELWGLIDDAIVPGDCQIYRFTSEFYKYCVISNLCSFKSQFEDDPFTEDGCIWALA FIFYNKALKRFVILTIRCLSKQADTSIEIFPDFSEDEAEPHEK" gene <1243782..>1247188 /locus_tag="CRE_29600" /db_xref="WormBase:WBGene00059906" mRNA join(<1243782..1243801,1243853..1244042,1244086..1244958, 1245003..1245208,1245596..1245754,1245813..1246228, 1246272..1246419,1246466..1246607,1246715..>1247188) /locus_tag="CRE_29600" /product="hypothetical protein" /db_xref="WormBase:CRE29600" /db_xref="WormBase:WBGene00059906" CDS join(1243782..1243801,1243853..1244042,1244086..1244958, 1245003..1245208,1245596..1245754,1245813..1246228, 1246272..1246419,1246466..1246607,1246715..1247188) /locus_tag="CRE_29600" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00017 (SH2 domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12649.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE29600" /db_xref="WormBase:WBGene00059906" /translation="MSTSQGSSHLVPIEKSTYYHGFLPREDVKMVLKTNGEFLIRISE PRKGEPRSHILSVFHNQPPNIDEETWIKHFVIKCNDNKVFIEKNAFPSIQELVDHHLK TKDSVKDDVFLIKALPRQSWELDHENIEIIKKLGEGAFGEVSMGKLKFRKGGKTVNVA IKQAKLSNLTKDQIKEFMGEARIMRQFGHPHVVRFYGVAATTEPLYMVMELATNGALD SYLKKNPDLSIEKKNEMILQAAWGLEYLHSKPVMHRDIAARNCLYGDGRVKISDFGLT RHGIAYQADPHKKAPIRWLAVEVIRQRLFSLKSDVWAYAIMSWEIYNNGIEPYPGMMV AEVAQKVLTGYRMELPAELNQEIKNLIARAWAENENERPSMAEIAMELQRITGTVRPD FVAMEAQIKKELIMANNLTHKSHARKNKGAKAKMPKGINSIPNSNDTLFYVPRVRISF KDLERCLVVIYTSVERFLRLEFLSKFGEVIVHRLESSYDLDDITAEKVTDTSPIVLAS CVLDSVLIDQHALVGTLEIEFSNSDKRIQTKILKEMSKTFQLDDGQMKNVLQTRKIMY NCLADVDIVSSFHEHIIDMKVLKEIAIEGIFFRLESVSIRKVFDSTEFLPKNKIQSCT KLEMSGYQTGDMKLCLRNLPQNGISTCRLLENSEFHRWDTLNAPVTRLNNTVQMKRVV LEPKKRFVVRWNKSKCGVWFHMVHVNDENDYLEFFENETCGLRYYCKKCSDPFDHWFY RNIPRRVYYEPQWTDIGYRPSSKQDMSLFLRTVRSLREMIREEVKKELADSSHGVEEL TEDDFDDDDDDDDENDEDDENDEGGVDDKEDDDDKDDAVDDEDEKFDFSLNLQEKGLI VFVIVLPIVLGILILYVYF" gene <1247492..>1248930 /locus_tag="CRE_29601" /db_xref="WormBase:WBGene00086122" mRNA join(<1247492..1247556,1247614..1247766,1247816..1248228, 1248276..1248426,1248471..1248606,1248649..>1248930) /locus_tag="CRE_29601" /product="hypothetical protein" /db_xref="WormBase:CRE29601" /db_xref="WormBase:WBGene00086122" CDS join(1247492..1247556,1247614..1247766,1247816..1248228, 1248276..1248426,1248471..1248606,1248649..1248930) /locus_tag="CRE_29601" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12501.1" /db_xref="WormBase:CRE29601" /db_xref="WormBase:WBGene00086122" /translation="MYADISAKSQLDVIRNVASIVRNSALSTPYCFVPRLRVSFKNVD RCLFVIYSDVEKFLRVEFRKESDGIVIKRMMNSYDENDSVAEKIDGTTPISLATSILA TAVMDRPLGVLEIEFFDPNPQEQRKIFNEMLKTLQSKIEGFRYYFRPQKFVANCLTDG EIFTSFHEEMLDLIRLKESAMETISMENHSLEPRSLIDTTSFMDDIQVALSGTELFST KPDERYLSNLMVQALNTDGFATLRFARKSDAGWWNKQKGKVFILNDSVLMKRVTLSDN LVAHWNLSECGLWVDISTLKNERKYWSCFEKEKCGLRSFCQKCAHRFDYWFYRDLPRR IINEPEWVIVREEKKDEKEKSGEEEATDTWEEMEFVDEFDQMEAFGCSAKMEKPIWSE RLLKKLI" gene complement(<1249292..>1259898) /gene="Cre-lam-3" /locus_tag="CRE_29812" /db_xref="WormBase:WBGene00059905" mRNA complement(join(<1249292..1249414,1249461..1249845, 1249896..1250079,1250133..1250488,1250544..1252853, 1253073..1254781,1254837..1255370,1255542..1258059, 1258151..1258461,1258543..1258633,1258681..1259392, 1259763..>1259898)) /gene="Cre-lam-3" /locus_tag="CRE_29812" /product="CRE-LAM-3 protein" /db_xref="WormBase:WBGene00059905" CDS complement(join(1249292..1249414,1249461..1249845, 1249896..1250079,1250133..1250488,1250544..1252853, 1253073..1254781,1254837..1255370,1255542..1258059, 1258151..1258461,1258543..1258633,1258681..1259392, 1259763..1259898)) /gene="Cre-lam-3" /locus_tag="CRE_29812" /note="contains similarity to Pfam domains PF00055 (Laminin N-terminal (Domain VI)), PF02210 (Laminin G domain) (3), PF00053 (Laminin EGF-like (Domains III and V)) (17), PF06009 (Laminin Domain II), PF00052 (Laminin B (Domain IV)) (2), PF06008 (Laminin Domain I); contains similarity to Interpro domains IPR000034 (Laminin B), IPR008211 (Laminin, N-terminal), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR001791 (Laminin G), IPR009254 (Laminin I), IPR002049 (EGF-like, laminin), IPR013032 (EGF-like region, conserved site), IPR012680 (Laminin G, subdomain 2), IPR010307 (Laminin II); coded for by the following C. remanei cDNAs: DY525097" /codon_start=1 /product="CRE-LAM-3 protein" /protein_id="EFP12687.1" /db_xref="InterPro:IPR000034" /db_xref="InterPro:IPR001791" /db_xref="InterPro:IPR002049" /db_xref="InterPro:IPR008211" /db_xref="InterPro:IPR009254" /db_xref="InterPro:IPR010307" /db_xref="InterPro:IPR012680" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013320" /db_xref="PFAM:PF00052" /db_xref="PFAM:PF00053" /db_xref="PFAM:PF00055" /db_xref="PFAM:PF02210" /db_xref="PFAM:PF06008" /db_xref="PFAM:PF06009" /db_xref="WormBase:CRE29812" /db_xref="WormBase:WBGene00059905" /translation="MRRLWLGLLAVSSVVLAAWNASDDASIWENYVEDSNYHEFMSTE SERGLFPNIFNLATNSLIMSTATCGQYSTEEYCKLVEHVLLRKTTNTQSPQCDICDAN NVHKRHPIEYAIDGTRRWWQSPSLANGLDYEKVNITIDLRQEYQVAYVIIKMGNAPRP GTWVLEKSLDGENYEPWQYFAMQDAECMRQFGIPATTGVPRFQRDDEVHCTSEYSKIT PLENGEIHTSLVNGRPGAEKPSLELQKFTRARFVRLRLVSPRTLNADLMIINKKSHSL DKSVTMRYFYSISDISIGGQCICYGHAESCPSDPVTGQFKCECRHNTCGESCNRCCPL FNQLPWKPGTNSHPNVCQQCQCFNHAHTCVYDEELDRNKWSITPEGVYEGGGRCLECT HNTEGFNCERCKDGYYRPSGMSHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPG DCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYC DRCKAGTIHLSASNQLGCQACFCFGLTNNCTQTEWNTAQITNNVGWNLTDLTGGKDVK PEVENGEVLMFNANQNQDRSLYYWKAPESFKGNMLNSYGGYLHYYVYYVPTEQGAQVP VPDVSIEGNGIKVEYYSRIEFLPRENMTVTIPIREGNGWYNAATRNAVDKADLMRALA HVDKFMVRAMYQQLQLQSSIFGLSLDTAVPAPDEIIEDDNSLSALSYHNQDTLMRGVE VCQCPENFGGNSCESCKKGYRRVNDQLYGGRCEKCNCEGHSDECDPFTGECINCQHNT TGSRCERCQPGFYGNPSLGGELGACWPCECPSLDNNRSPECMMTELIVSGAAAANEDD YVCTACERGYEGNKCEHCSDGFFGDPMNGTCEECTCNGNIDPMGIGNCDTETGKCLKC IGHTTGDSCEVCKENHWGNAQLHTCKPCGCHTQGAVNPQCNEENGECECKENYIGTQC DRCKENHGDVDNGCPACDCNETGSIGTDCDQVSGQCNCKQGVFGKQCDQCRPSYFNFT DAGCQFCHCNIYGSIEDGKCDQVSGKCECRENVEGTMCEKCADGYFNITSGDGCEDCN CDPTGSEDVSCNLVTGQCVCKPGVTGTKCDKCLPNFYGLTNEGCSECEPCPAPGQVCD PLDGSCVCPPNTVGEMCENCTTNAWDYHPLKGCKLCDCSDIGSDGGMCNTLTGQCKCK QAYVGLKCDLCTHGFFNFPTCEPCGCNAAGTDPLQCKDGQCLCNELGECPCKKNVRGQ KCDECAEGTISLDASDLKGCTECFCFNRTATCEQSSLVWQQMYAEDRRAVFQEPWEFY SKKHNINLLRVSFNLPFFQCNFIFQSSPSHFNSYPTDATPLYWPLPTTMLGDRSTSYN GFLRFKIWNEDNRRGLHGIRPDQQYFRYFPQVIIVGNNRIELEHIPTEINEDGIYKIR IHESEWRARHSPELSLTRKQLMVALQNVQGIYVRGSYNYPARGDVINIQEISLDVAVP ESKIVAGLSTSKAIGVEKCSGCPQGYSGLSCQNPDEGYCRKKHRDYLNQADDLALIGW SEPCSCHGHSQTCNPDTCVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKCACPL VENSFSDSCVAVDHGRGYVCNACKPGYTGQYCETCVAGYYGDPQHIGGTCTPCDCHPD GSLHGACNPLTGQCECKPGVTGRTCSMCQERHAFINRVCTSCDQGCYLPLMMTMDDME EHLGRQNFTGLKPIPWKRVWRIGNESQDLAAFVGGIDKDGEIVKDSKWAKDAFGLLDE VNFQTGRSNKSAVSIKQFTDIAEKLILDAQIYYANAFNTTNFLKMFAEHGATTVGGAA LDGMLMEAEAHLNATVERGEYIEKRHNRAQQEHQKAEELLKLVTAQKLNETIFEDLKN RIDVLEQWMNDYRETIYDIAKKDTADAERMSNVVGKRIDRYKEVSNEIEKIRVEAEDQ IAFSRNAIEKARSEELMNMVEDKEKINMTLTELPELVEKCQNITLLYSQLIDEYDEEY VQASNKHASELEIQAQKIVDRFTETRTETENPLKASHAYENIVEALKNATEAVDSAAA ASEAVSKMLAYDSGDGNEESLASQLARLRNGSSVDDVDTKSAAEQVEQLRKERKELMD RLGYVNEMKIDIVKRLGVIKNEASSWDDKHDRMHSVLKNGAKTAHERSANVKKESEAI KNEITAVKAEVEKLMNSTSSGVQEDMEKIRSSRTGMEYGAQRLSKVGKLSTANQGRAD KMARNIALLKDKIEQAREKAYQIRLSLNSGERGLCKRSYISPASPSPINSFHISYRPL QRVSDAVVLVSKTKGRRTQASEYVAVEIRDQRVVVHWDIGSGKKMITNSHPINYVPSN DRVTWYHIDILRIGNALNLTVALKESYDGGFKPRGAPVSVFVGNSNDDNSIFNTIPGE TTVDVGTDEPTASDIGLITHKFSGIVGGLRIDEVPLPLWSFESTTGECEGATAPPKTS QRGYLFRDGFAEVSMMVSERTMSAITVIFNAFSPNGLLYFRGSENSGDFVAIYLNDGK VIFKINLGGGSTAELASQNVYNDGKEHTVKAIRTGSEMYLQVDSDADRFNTVITGENT ALNIDNEQHYVAGVPMTLNKEKFSDYSINWNGFIGCILTVKPSQVGELDLDHPEHSQG KSDGCSFETSTDKTIGFPKPGFLITNGVSIDNNSTFGFSFRTREENGTLIYQSSKLQK VTKRDTESDGQGYMAFYLFRGYLVLHFGKDASSRKEVVTFRSTHAYNDGQVHAVFMSR SGKTISVKVDDKEIGESQTLPDESPVGTSSGRLILGGFSDDLKPPNNEIPITSFFIGC ISDVFLNMKRVSLTPEKHNAQIGMCTLDESNGMVPIDDPIDGDGHNGHRKASKLSFEA TNRNYYEVSTQASHLVMNPNGNEESQPTTGEKTCETSIGSLRGAVRYGLSKSSHSRIN FEAPYPNITDFTVKLSLQTESSNGMIWAWANYKNYTRYIFLDLIDGFATLEVKGHKQA KILKHLGRRLNDGQWHDVVVEKRNRSLKLRIDSLESVEMTDCPTPKVMKKRVYVGGVI SRHRRQFGLTTPGFDGCIRDFEMNNKIYDNLDEPSISKNVMPCAKACKLKRSSKSKRK RDSQ" gene complement(<1261932..>1264912) /gene="Cre-pash-1" /locus_tag="CRE_29813" /db_xref="WormBase:WBGene00059904" mRNA complement(join(<1261932..1262408,1262457..1262995, 1263040..1263280,1263326..1263568,1263645..1263725, 1263974..1264048,1264099..1264218,1264270..1264369, 1264424..1264541,1264589..1264783,1264828..>1264912)) /gene="Cre-pash-1" /locus_tag="CRE_29813" /product="CRE-PASH-1 protein" /db_xref="WormBase:WBGene00059904" CDS complement(join(1261932..1262408,1262457..1262995, 1263040..1263280,1263326..1263568,1263645..1263725, 1263974..1264048,1264099..1264218,1264270..1264369, 1264424..1264541,1264589..1264783,1264828..1264912)) /gene="Cre-pash-1" /locus_tag="CRE_29813" /note="contains similarity to Interpro domains IPR001159 (Double-stranded RNA binding), IPR001202 (WW/Rsp5/WWP)" /codon_start=1 /product="CRE-PASH-1 protein" /protein_id="EFP12335.1" /db_xref="InterPro:IPR001159" /db_xref="InterPro:IPR001202" /db_xref="WormBase:CRE29813" /db_xref="WormBase:WBGene00059904" /translation="MEPESGGVNQQLLAEREAILKQLALLGSGSEDEGDGDEEEEAKK VKFEVKEVKVEVKEEDNIKVEIVETEVGYSEPVLFNSSPDSIQSSTALEEEEEIISDR KTPIDCDEREKREADSSNTSSENSRTPPVAVEKTVLDRVDFDKSYPLPDGWTRIAHYS GMPVYYHKFTQVVTHSRPYQVDGMVRDHEIPVSAIPCLYREVMDKKYEDLKNHRTENS ENCDEKEKRCPIEIPPNESKMNPEQYRDYCARRFKFKKVTVHRYIDKEGKQSAAQKRR VNSMLKNKGFELDYDQLKQKNQPGEVLLTSASGACLIDLTPIQPNLSLKKGSGPKKPY LLNPMGKTSVAVLNEFVQRLAKGTLVYEVENTRNVSAPYKATALLTMKMSTIRDLAGQ CKESLIVLSEIATASENVPAPGIADDFKRFEIGSGNGSNKKTARLVAAKDALSKLIPK LRMSEEYVCDGVLEQELQKDFETSSKVLLKQVKIDSSGLVEMCNRFGIPKPFALLKEV VARSMRWSGVEFKKEREMVGSGSQLSRVILSLGEMKSSAEAIGMKQANEIAAQRLFKQ MHPDMESYGNLLKVYGHLVDKTPLENSKRQHDEVVRLQDTGNLLQPNLTVIAKLTEEM EKVTLIHPPRNFLYGLSPNATGVRTNKASMDTQTEILNYNFIPHMNPNPIMIPPPYFH VPPQMQPPMQPLLHMPMVHSPQFSAAPPPVQDYGIYQSPQYQSPQYQQRNARKRSRPD ETLSPCSYSMHQKPPYN" gene complement(<1265203..>1267914) /locus_tag="CRE_29814" /db_xref="WormBase:WBGene00059903" mRNA complement(join(<1265203..1265358,1265407..1265548, 1265597..1265965,1266030..1266815,1267320..1267714, 1267765..1267865,1267911..>1267914)) /locus_tag="CRE_29814" /product="hypothetical protein" /db_xref="WormBase:CRE29814" /db_xref="WormBase:WBGene00059903" CDS complement(join(1265203..1265358,1265407..1265548, 1265597..1265965,1266030..1266815,1267320..1267714, 1267765..1267865,1267911..1267914)) /locus_tag="CRE_29814" /note="contains similarity to Pfam domain PF00051 Kringle domain; contains similarity to Interpro domain IPR000001 ()" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12587.1" /db_xref="InterPro:IPR000001" /db_xref="PFAM:PF00051" /db_xref="WormBase:CRE29814" /db_xref="WormBase:WBGene00059903" /translation="MTTKDFERIDSLLKLCEEHQKNLRASLQKTTQRVMEVKTQMNIR CTQIWGKLEHIRERFDKIHRSNQSVRNELKDEKQHFSELKFQFLDKIKEKLDEINAQE MEANRENDEFRRKAVFIRRQRRKHGLIRSIGSSIYNYGISILTFIGWYKPVKKAPKET KKQQGLPVTTLESFPGKFTKVSVSDDCETNPESEKIFGQRVNFYEDDTGNVFCFRKKE GGIRMSSTSRSFEDPRFMCSKGPMSWYRGRRNMDFKDRPCLFWSNFPNSTFDISDSSS SSYSMKRILPDEYENFCRNPDKNPLGPWCHVAGGLKVPCFEPCRPSTETSSDFVCLNR DGFPYTEYEMSDVLDLPQLIGVFENVQLMYESRFVLPVEVDRLSTKRFEILEITINMN IKFCSCINKGNIATRFGPWIAVLNEIAKDFLKTIGRRVLRDLCAPINSVELSTRYQGI LYDAIIEDEFTVSGCSFWRRCFSSCQDDISTCWLKNQTSYFGSKTTSTSGKGCLPWTQ VSSEILKMTKGNVTSSDNYRLYNDLLFEDSNKFFVESRLFMNTESSCMLLNRRNSTEM DKSYIENPYFSKEKWNDEFKKMFQQGPGCFVKKNKTIEFELCYSGCEKHPKVQLTKPL CLEKNKYSICKPKRGEDWLKRGRKVE" gene complement(<1268079..>1270524) /gene="Cre-set-18" /locus_tag="CRE_29815" /db_xref="WormBase:WBGene00059902" mRNA complement(join(<1268079..1268222,1268271..1268615, 1269214..1269354,1269412..1269862,1269913..1270058, 1270110..1270194,1270269..1270378,1270423..>1270524)) /gene="Cre-set-18" /locus_tag="CRE_29815" /product="CRE-SET-18 protein" /db_xref="WormBase:WBGene00059902" CDS complement(join(1268079..1268222,1268271..1268615, 1269214..1269354,1269412..1269862,1269913..1270058, 1270110..1270194,1270269..1270378,1270423..1270524)) /gene="Cre-set-18" /locus_tag="CRE_29815" /note="contains similarity to Pfam domain PF01753 MYND finger; contains similarity to Interpro domain IPR002893 (Zinc finger, MYND-type); coded for by the following C. remanei cDNAs: DR777320" /codon_start=1 /product="CRE-SET-18 protein" /protein_id="EFP12451.1" /db_xref="InterPro:IPR002893" /db_xref="PFAM:PF01753" /db_xref="WormBase:CRE29815" /db_xref="WormBase:WBGene00059902" /translation="MAVKKNKNVPKSVPKEEDPLVQKDDISSIHARIKIFETPFATQV SNPKVNEFCANCMRGPAPGEKLLRCGGCNFSMYCSKECQATAWLVHKPECRRLKASFP NLPLTEVLFLSKIIDRIQFLEKNGDKLGVESARKFSSLVDHKVDIREDEEKMKHFEKV FTKMGLFRGDEMIEKGQFFDVFCKASINSHSIHTNAGNEVGMALDLGVSMYNHSCRPT CSMVFDGYRVCLRPLVPGVDAESTEQAFISYIDVGRSKYVRRKDLKSRWYFDCECTRC MDPEDDALTAIRCANPACDAPVLTSETEEPMNIACDKCKTIIEENDVKKAQEFMKSLP ASFDPQCPADILQDLLSKAEVVLHPSNVYVARLRTALFHVTGQLTMDNLSTMHTQIYN NYKLCFPKADRHVGFQLLHIVKALIEKDERDEAMPYAFDAMNIFEVCFGLDHPYYLQT LALWTYLEKKLPKTKEELVQLTNFSDNRPIDIVSLLKRANMLPPPPYAAASSVQPVQ" gene complement(1268716..1268786) /locus_tag="CRE_32225" /db_xref="WormBase:WBGene00186633" tRNA complement(1268716..1268786) /locus_tag="CRE_32225" /product="tRNA-Gly" /db_xref="WormBase:CRE32225" /db_xref="WormBase:WBGene00186633" gene complement(<1271269..>1272804) /gene="Cre-lst-1" /locus_tag="CRE_29816" /db_xref="WormBase:WBGene00059901" mRNA complement(join(<1271269..1271356,1271411..1271673, 1271726..1272265,1272540..1272608,1272769..>1272804)) /gene="Cre-lst-1" /locus_tag="CRE_29816" /product="CRE-LST-1 protein" /db_xref="WormBase:WBGene00059901" CDS complement(join(1271269..1271356,1271411..1271673, 1271726..1272265,1272540..1272608,1272769..1272804)) /gene="Cre-lst-1" /locus_tag="CRE_29816" /note="coded for by the following C. remanei cDNAs: DR408586, DR776112" /codon_start=1 /product="CRE-LST-1 protein" /protein_id="EFP12677.1" /db_xref="WormBase:CRE29816" /db_xref="WormBase:WBGene00059901" /translation="MSSTFFPLQHHQELQCSCNNDSKSYFKPQREVPKQLLQLRSQVK PLIPRDRQSNLWNHRSGRVAINRSPSPQPRTNHTQKLHLAYIEKDKRVIPMIPQHHQY TAFDRPVQYQSRKMTFSGPPLMRTPSSGFSSASSSENMLSGLSLCDNEHQKVQEIMDP SVEVDLDMFLLPDARYKQPVQPSASTSRGNLSQISGQSQIGGSMRHIAPSKSAMPSSF ADYSYANVKRSNGYTDYMPTTYSANTVSQPSTSSVPISPRSCVRCQFCWESYVKLCQR VTSLEPLVSCDGPWHWHNLYDAQGRVSCPRLWFTQLDRAGSDMLQQMANSRKAAF" gene <1277026..>1277416 /gene="Cre-hsp-12.1" /locus_tag="CRE_29602" /db_xref="WormBase:WBGene00059900" mRNA join(<1277026..1277217,1277279..>1277416) /gene="Cre-hsp-12.1" /locus_tag="CRE_29602" /product="CRE-HSP-12.1 protein" /db_xref="WormBase:WBGene00059900" CDS join(1277026..1277217,1277279..1277416) /gene="Cre-hsp-12.1" /locus_tag="CRE_29602" /note="contains similarity to Pfam domain PF00011 Hsp20/alpha crystallin family; contains similarity to Interpro domains IPR002068 (Heat shock protein Hsp20), IPR001436 (Alpha crystallin/Heat shock protein)" /codon_start=1 /product="CRE-HSP-12.1 protein" /protein_id="EFP12389.1" /db_xref="InterPro:IPR001436" /db_xref="InterPro:IPR002068" /db_xref="PFAM:PF00011" /db_xref="WormBase:CRE29602" /db_xref="WormBase:WBGene00059900" /translation="MHTIPITTDSAASWDWPLQHHDGVVKVTNTSEKFEVGLDAGFFG PSDIDVKVNGLEIIIHLRHEDRQTEYGVVNREIHRTYKLPDDVDPSTVKSHLNSAGVL TITAKKI" gene complement(<1278246..>1279355) /locus_tag="CRE_29817" /db_xref="WormBase:WBGene00059899" mRNA complement(join(<1278246..1278559,1278609..1278789, 1279182..>1279355)) /locus_tag="CRE_29817" /product="hypothetical protein" /db_xref="WormBase:CRE29817" /db_xref="WormBase:WBGene00059899" CDS complement(join(1278246..1278559,1278609..1278789, 1279182..1279355)) /locus_tag="CRE_29817" /note="contains similarity to Interpro domain IPR011323 (Mss4/translationally controlled tumour-associated TCTP)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12386.1" /db_xref="InterPro:IPR011323" /db_xref="WormBase:CRE29817" /db_xref="WormBase:WBGene00059899" /translation="MVTFKDHITGDLLMESDNGKFELVEELFFKFPGNYIEVETASEG RKTVIDVIWKYKLKKFDMWRVEKDIFDFGEKLGELVETKMYGDNADFTYMIDYIFNLR AWFRANRETKDIKVFMGPSSTYMNHAYAKNYTPVFVKEENGIPFIYIFKETVHADGLI EDRISRMTLKETEDFPGQPSQNTENVSDDEDDEKEEKEKKQSENIEKKEENIPAMKSE TAAQ" gene complement(<1281062..>1282939) /gene="Cre-rtel-1" /locus_tag="CRE_29818" /db_xref="WormBase:WBGene00059897" mRNA complement(join(<1281062..1281135,1281182..1281311, 1281357..1281431,1281477..1281650,1281697..1282398, 1282440..1282800,1282848..>1282939)) /gene="Cre-rtel-1" /locus_tag="CRE_29818" /product="CRE-RTEL-1 protein" /db_xref="WormBase:WBGene00059897" CDS complement(join(1281062..1281135,1281182..1281311, 1281357..1281431,1281477..1281650,1281697..1282398, 1282440..1282800,1282848..1282939)) /gene="Cre-rtel-1" /locus_tag="CRE_29818" /note="contains similarity to Interpro domain IPR006555 (Helicase, ATP-dependent, c2 type)" /codon_start=1 /product="CRE-RTEL-1 protein" /protein_id="EFP12481.1" /db_xref="InterPro:IPR006555" /db_xref="WormBase:CRE29818" /db_xref="WormBase:WBGene00059897" /translation="MRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGAILENEHALK QVPVLTSIVTRGKHGGLTGSFQNRKNVNYVSDVAEALIRVMEATPQGILVFFSSYSQM DELVATWKTMKSAANSTDTFWARMEKSKRVVVEPRAKEELAAVRLKYTQGVSEPHGAA LLAVCRGKVSEGIDFCDAESRAVIIVGIPYPPIHDERVVLKKKYLDDLMGRKDVTHEK QSSTDWYQMEAFRAVNQAIGRVLRHKNDFGTVVLLDTRYATAKPEMFPKWLRSTISRM DSDNCALKTARFFKERCHLIEVSSFLKILFNFEYFQNSKVDYIKKQAKQCKSFSQAKK SFPSNPRDDITEITLEDMFSPANMMLEKKESNKLMSPSVKPSLSSVFSLPTNEDELKI KKWEQENDSQSTTSSVSDSNKRKFKTEIPVSSSQVSNQRSEPPKKKKLILLTRETLPE KYQKALDIPTSELTKGVSMSYENQKQFVATLKGYKATSIEWEEVFQRLRPIFVPEKPE LFISCSNILRSEDKMKYLRKALSSKIY" gene <1283406..>1284866 /locus_tag="CRE_29603" /db_xref="WormBase:WBGene00059898" mRNA join(<1283406..1283588,1283635..1283991,1284039..1284190, 1284237..1284358,1284406..1284707,1284753..>1284866) /locus_tag="CRE_29603" /product="hypothetical protein" /db_xref="WormBase:CRE29603" /db_xref="WormBase:WBGene00059898" CDS join(1283406..1283588,1283635..1283991,1284039..1284190, 1284237..1284358,1284406..1284707,1284753..1284866) /locus_tag="CRE_29603" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12719.1" /db_xref="WormBase:CRE29603" /db_xref="WormBase:WBGene00059898" /translation="MQQSSEQRSFDVIDANEEEDINRVSMYSPDPSPINSPNISSMPS SHFVPVTVCFELENVTQFLNSINTNRNMVITSVKRELMSCFMPGDQISSFNGISIWNR FQLDKELLNVQKLDFQKTKVTFVVIRAWNISCLTRSQLDRLSPPPDDRLHYFSVKVYC NNRAAGLYLRSEKKRLLVNHIRSKTAISFGLLVGDQLLGINDEMLVGNQTKALYKQAK NLMLKSRKMEFIEMIACRPVLVRSSPAPSVDGELAMKATLKNAADLVNKIEKKANEDL ASLPLEADALEIALRELTLLQQWIKIDKPLPYCEKGGSLLRFPSFSADQSTCPTERSE CGTSSTTASSTMAPPTPDVPKKRGMIFRRRQQQTIGFTELAETSKVTSDISEEAELKK CDPRSGIVSYIKNAFNN" gene complement(<1285087..>1286386) /locus_tag="CRE_29819" /db_xref="WormBase:WBGene00086139" mRNA complement(join(<1285087..1285186,1285230..1285664, 1285715..1286205,1286255..>1286386)) /locus_tag="CRE_29819" /product="hypothetical protein" /db_xref="WormBase:CRE29819" /db_xref="WormBase:WBGene00086139" CDS complement(join(1285087..1285186,1285230..1285664, 1285715..1286205,1286255..1286386)) /locus_tag="CRE_29819" /note="contains similarity to Pfam domain PF06733 DEAD_2; contains similarity to Interpro domains IPR014013 (Helicase, superfamily 1 and 2, ATP-binding, DinG/Rad3-type), IPR010614 (DEAD2), IPR002464 (DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site), IPR006554 (Helicase-like, DEXD box c2 type); coded for by the following C. remanei cDNAs: DR778710" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12608.1" /db_xref="InterPro:IPR002464" /db_xref="InterPro:IPR006554" /db_xref="InterPro:IPR010614" /db_xref="InterPro:IPR014013" /db_xref="PFAM:PF06733" /db_xref="WormBase:CRE29819" /db_xref="WormBase:WBGene00086139" /translation="MSSKPTSSATTEVWVNTKVCVKFPFEPYECQRIFMKNVVDVLDR KLDAALESPTGTGKTLSLLCSTLAWVQKQKEIKPLDFSTWQSSGAGGAEKTEEKLKNS FIPTIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSREHFCINQKVKKIKESNRQSH VCRGLVSKRACHYYNKFDAMTTDKMNEVLDKGDAMDIEDFVKLGTQNSLCPYFMSRQR SETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASAELSSTNIA LCIEELKKVLALLVDEEETARAEADMDTEAFGNQKIDLTKKLIENLRTEDLMAVLEKA FLLEEELDKLYESNLLKVSPFHHWMEKPVTEKFFWKLSQSQDSMEIQLNDW" gene complement(<1286504..>1288407) /locus_tag="CRE_29820" /db_xref="WormBase:WBGene00059896" mRNA complement(join(<1286504..1286731,1286799..1286891, 1286939..1287034,1287085..1287213,1287260..1287568, 1287613..1287719,1287764..1287899,1287942..1288121, 1288165..>1288407)) /locus_tag="CRE_29820" /product="hypothetical protein" /db_xref="WormBase:CRE29820" /db_xref="WormBase:WBGene00059896" CDS complement(join(1286504..1286731,1286799..1286891, 1286939..1287034,1287085..1287213,1287260..1287568, 1287613..1287719,1287764..1287899,1287942..1288121, 1288165..1288407)) /locus_tag="CRE_29820" /note="contains similarity to Xenopus tropicalis Novel protein.; TR:Q28C31; coded for by the following C. remanei cDNAs: DT936133, DR407093" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12414.1" /db_xref="WormBase:CRE29820" /db_xref="WormBase:WBGene00059896" /translation="MIPSLYHIDCNKNINYCLPRIWCRFSNLTQNNNFQMINVTEFCR LVTDHEQILLCKGVDFFATRVWDKLITEWKMSLNSSTAEELISFANSTHKELECRFPD SLKELKSNLKRLEYSRKFVQSPDKLWEKWTSRKPAASLQTEFRTITSNELLRKKIKLK KQHEIDRIIELISQIQTFMDHESGSQNTIDSVIDIGAGVGHLSRMISLVNKLAVMAVE GNHQFTLSAHNLDEKLLQDSNINLTTTPMRFTSFVTEEMATKVDDFAQNSAIIVGLHC CGDFSSTILKVFLKSRKARALVLFGCCYHKEFQCFHFLNPDNKDAQTLNDTKLQTSTV FPLSRKWKGCDLSYNHREIACHNNENMASRFGKTSADSSRYARAHLEKWIWEVSDSPS DRNIGMCSVKCVENKTTFEEYIRKALAKRGNHLLDKVLRIIPKSELSSFVSSFKSSQF DSFDVLRLMFAPAIESAIIDDRISFLQENGVNAQCIPLFDPTISPRNLAIIAYKHC" gene complement(<1288452..>1289256) /gene="Cre-tct-1" /locus_tag="CRE_29821" /db_xref="WormBase:WBGene00086124" mRNA complement(join(<1288452..1288969,1289229..>1289256)) /gene="Cre-tct-1" /locus_tag="CRE_29821" /product="CRE-TCT-1 protein" /db_xref="WormBase:WBGene00086124" CDS complement(join(1288452..1288969,1289229..1289256)) /gene="Cre-tct-1" /locus_tag="CRE_29821" /note="contains similarity to Pfam domain PF00838 Translationally controlled tumour protein; contains similarity to Interpro domains IPR011323 (Mss4/translationally controlled tumour-associated TCTP), IPR001983 (Translationally controlled tumour-associated TCTP); coded for by the following C. remanei cDNAs: DY525877, DR779729, DR777420, DY528636, DY528650, DR779932, DT934147, DT937023, DR781961, DY529658, DY529540, DR779567, DT935332" /codon_start=1 /product="CRE-TCT-1 protein" /protein_id="EFP12520.1" /db_xref="InterPro:IPR001983" /db_xref="InterPro:IPR011323" /db_xref="PFAM:PF00838" /db_xref="WormBase:CRE29821" /db_xref="WormBase:WBGene00086124" /translation="MLIYKDIFTDDELSSDSFPMKLVDDLIYEFKGRHVVRKEGEIVL AGSNPSAEEGGDDEGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNIIDH MEKNNRDKADVDAFKKKIQAWVVSLLSKDRFKTLQFFIGEKAAEGAENGQVAIIEYRD VDGTEVPTLLLVKEAIVEEKC" gene complement(<1289424..>1290450) /gene="Cre-rpa-0" /locus_tag="CRE_29822" /db_xref="WormBase:WBGene00059895" mRNA complement(join(<1289424..1289891,1289936..1290261, 1290306..>1290450)) /gene="Cre-rpa-0" /locus_tag="CRE_29822" /product="CRE-RPA-0 protein" /db_xref="WormBase:WBGene00059895" CDS complement(join(1289424..1289891,1289936..1290261, 1290306..1290450)) /gene="Cre-rpa-0" /locus_tag="CRE_29822" /note="contains similarity to Pfam domains PF00466 (Ribosomal protein L10), PF00428 (60s Acidic ribosomal protein); contains similarity to Interpro domains IPR001813 (Ribosomal protein 60S), IPR001790 (Ribosomal protein L10); coded for by the following C. remanei cDNAs: DR781035, DR775680, DT935717, DY528048, DT936280, DT934142, DR777681, DR406308, DR409174, DR780310, DR407123, DT935945, DT933459, DT937474, DT934778, DR778751, DR778231, DY529314, DY527933, DY527698, DR779562, DY527314, DY525630, DY526959, DR777626, DT934015, DT936425, DT934273, DR780026, DT933308, DR782294, DY528910, DR781770, DY529376, DR407278, DR406966, DR779804, DR779368, DR779040, DR408889, DY525127, DR780698, DY526163, DR776968, DY527009, DR780189, DR409080, DR777990, DT933391, DR409486, DR779840, DY527738, DT936384, DT934493, DR407366, DR408752, DY528370, DY529523, DY527475, DR775846, DR780204, DT935464" /codon_start=1 /product="CRE-RPA-0 protein" /protein_id="EFP12466.1" /db_xref="InterPro:IPR001790" /db_xref="InterPro:IPR001813" /db_xref="PFAM:PF00428" /db_xref="PFAM:PF00466" /db_xref="WormBase:CRE29822" /db_xref="WormBase:WBGene00059895" /translation="MVREDRSTWKANYFVKLIELFEEYPKCLLVGVDNVGSKQMQEIR QAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKL LENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNEVHL IKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSG VRNVASVSLAIKYPTLASVAHSLASGLQNMLGVAAVTDVSFKEAETIKAYIADPSKFA SAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD" gene complement(<1291767..>1292654) /gene="Cre-pas-5" /locus_tag="CRE_29823" /db_xref="WormBase:WBGene00059894" mRNA complement(join(<1291767..1291955,1292000..1292334, 1292402..>1292654)) /gene="Cre-pas-5" /locus_tag="CRE_29823" /product="CRE-PAS-5 protein" /db_xref="WormBase:WBGene00059894" CDS complement(join(1291767..1291955,1292000..1292334, 1292402..1292654)) /gene="Cre-pas-5" /locus_tag="CRE_29823" /note="contains similarity to Pfam domain PF00227 Proteasome A-type and B-type; contains similarity to Interpro domains IPR001353 (20S proteasome, A and B subunits), IPR000426 (Proteasome alpha-subunit, conserved site)" /codon_start=1 /product="CRE-PAS-5 protein" /protein_id="EFP12571.1" /db_xref="InterPro:IPR000426" /db_xref="InterPro:IPR001353" /db_xref="PFAM:PF00227" /db_xref="WormBase:CRE29823" /db_xref="WormBase:WBGene00059894" /translation="MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSE GVLLAAEKRSTSKLMVNDAIEKISKVDQHIGEFRRYKFENCVTFAGLIADSRTLVERA QIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGA KLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEALKMALAILKQVMEEK LNSANVEVVVIKPAVDGKGRPIGEFTRVSNEELDTVITSL" gene complement(<1294861..>1296534) /gene="Cre-ubc-25" /locus_tag="CRE_29824" /db_xref="WormBase:WBGene00059893" mRNA complement(join(<1294861..1294965,1295276..1295428, 1295478..1295975,1296071..1296412,1296457..>1296534)) /gene="Cre-ubc-25" /locus_tag="CRE_29824" /product="CRE-UBC-25 protein" /db_xref="WormBase:WBGene00059893" CDS complement(join(1294861..1294965,1295276..1295428, 1295478..1295975,1296071..1296412,1296457..1296534)) /gene="Cre-ubc-25" /locus_tag="CRE_29824" /note="contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR000608 (Ubiquitin-conjugating enzyme, E2), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like); coded for by the following C. remanei cDNAs: DR779290, DY527859" /codon_start=1 /product="CRE-UBC-25 protein" /protein_id="EFP12518.1" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR016135" /db_xref="WormBase:CRE29824" /db_xref="WormBase:WBGene00059893" /translation="MACLRKLKEDIQVLEKLFPKKHNRFQILSASVDELSMKFITADN KGIIVTANIQENYPRQPPIWFSESDDVPVIGASLQRLTETEESTNILHQVHRLVSDLC SFYGVQVPCELPQIAPPARDDIDEGRGSDMSDSASEVIAIDDDMAGDVEEDDVEEEEE EEDDEDAEGDIEIVEMADEDPTSQQDIGVSKAGLDMLDKVSRVNRQQHLDGRVTGSIT ATDRLMKEIRDIHRSEHYKNGVYTFELEKEENLYQWWVKLHKVDEDSPLFEDMKKLKA EQNQDHLLFSFTFNETFPCEPPFVRVVAPHITNGFVLGGGAICMELLTKQGWSSAYSI ESCILQIAATLVKGRARISFDPKHTTTYSMARAQQSFKSLQQIHAKSGWYTPPKTEG" gene complement(<1300430..>1301812) /locus_tag="CRE_29825" /db_xref="WormBase:WBGene00059892" mRNA complement(join(<1300430..1300661,1300710..1300795, 1300840..1301007,1301052..1301213,1301262..1301399, 1301444..1301616,1301662..>1301812)) /locus_tag="CRE_29825" /product="hypothetical protein" /db_xref="WormBase:CRE29825" /db_xref="WormBase:WBGene00059892" CDS complement(join(1300430..1300661,1300710..1300795, 1300840..1301007,1301052..1301213,1301262..1301399, 1301444..1301616,1301662..1301812)) /locus_tag="CRE_29825" /note="contains similarity to Pfam domain PF03314 Protein of unknown function, DUF273; contains similarity to Interpro domain IPR004988 (Protein of unknown function DUF273); coded for by the following C. remanei cDNAs: DR409250" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12308.1" /db_xref="InterPro:IPR004988" /db_xref="PFAM:PF03314" /db_xref="WormBase:CRE29825" /db_xref="WormBase:WBGene00059892" /translation="MRTFQRYSIGLLIFVVFIIIFEELNTGKGRIKLSNLYNHEVIRN ITVSRQGRKENIGIVIVLNEVEDEKEYQMALDTVRCYGRYFEYDVHVIHAEKEDVIKE KCQQKDFMFRRHCILSLKMLSISNTWLLFLDGDMGVINPNHLIEDYLSVDRNTQIVFY NRIMNHEVMAGSYLVRNSHWSRRFLMFWANFEKKLPRSFHGSDNGAIHSVILNQALPS IKPKLDICENEFWIKSTDYESLSTYEVCAQELIKNVSIPEIKILPKGRFAWARDGWLT DSIWSDTDFIFHGWQIKRKDKLIFGRWHSPLVYVDPWNLTTCSDKEAWKNWKYRDTSM ARIVDVDRKIFEKIQEERKNYEEHLQIISDHLQFE" gene complement(<1302221..>1304861) /locus_tag="CRE_29826" /db_xref="WormBase:WBGene00059891" mRNA complement(join(<1302221..1302348,1302394..1302526, 1302571..1302973,1303022..1303119,1303167..1303337, 1303385..1303591,1303638..1303952,1304439..1304558, 1304605..1304770,1304848..>1304861)) /locus_tag="CRE_29826" /product="hypothetical protein" /db_xref="WormBase:CRE29826" /db_xref="WormBase:WBGene00059891" CDS complement(join(1302221..1302348,1302394..1302526, 1302571..1302973,1303022..1303119,1303167..1303337, 1303385..1303591,1303638..1303952,1304439..1304558, 1304605..1304770,1304848..1304861)) /locus_tag="CRE_29826" /note="contains similarity to Pfam domains PF00169 (PH domain), PF01852 (START domain); contains similarity to Interpro domains IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type), IPR002913 (Lipid-binding START); coded for by the following C. remanei cDNAs: DT935646" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12742.1" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR002913" /db_xref="InterPro:IPR011993" /db_xref="PFAM:PF00169" /db_xref="PFAM:PF01852" /db_xref="WormBase:CRE29826" /db_xref="WormBase:WBGene00059891" /translation="MENEVVLPTNGVLKKWTNYVNGWQERYFEITEGNLVYYKSKAEK THGCRGSIFLKNAIIAAHEFDENEFSISMGENVVWYLKAENSQSKLLWMRSVVRETVQ NDSDYSSTSTKSHSRNPSVSSALVSINQKADDNESTKLFSTKLSELEAYRTMCKDQMT SIERLLEQGGASCIVPQATILSVKATHLALIVNINHIVDLVKTSKIVIPETTSSTSAT PPSSSTPPPQREPLCATRSVSSSGLRRESTVDQEYMSDDNSTMTASTILARPDIDVTS DCDEFFDADEFDVDSKNGDASEKKTEETVDTTFEDKENGNTVVEDRIPKKPSFRIEGN PPTGHYDDLLVSQEHTLFSTIDKLAVEQLKYALAGVEDNVWSLFAEDGKMRMYTRQIE DEGGLPVDPLKATHSVDGVTALEFMHYFYDARYKMLWDHTLEAMSVVEHISPDSVVLH QKHKTVWPAAPRESLFVSHIRRVDEHKRDGAHDLYIVCNTDVKREDVPLSSSSAVRVG LTVSMICETIVKDPHVDRKLSRDDIKCNIIYVSQVHPGGWVPVAALRHVYKKEYPKFL RTFTEFVKKNVNGKPISI" gene <1305567..>1306252 /locus_tag="CRE_29604" /db_xref="WormBase:WBGene00059890" mRNA join(<1305567..1305706,1305790..1305883,1305938..>1306252) /locus_tag="CRE_29604" /product="hypothetical protein" /db_xref="WormBase:CRE29604" /db_xref="WormBase:WBGene00059890" CDS join(1305567..1305706,1305790..1305883,1305938..1306252) /locus_tag="CRE_29604" /note="contains similarity to Pfam domain PF00334 Nucleoside diphosphate kinase; contains similarity to Interpro domain IPR001564 (Nucleoside diphosphate kinase, core); coded for by the following C. remanei cDNAs: DR406876, DR406791, DT933694, DR779837, DR778947, DY526312, DY529357, DY529622, DR776751, DT937407, DY525157, DT933797, DY527410, DY529725, DY527920, DR407099, DR406781, DR776276, DT935518, DT936568" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12438.1" /db_xref="InterPro:IPR001564" /db_xref="PFAM:PF00334" /db_xref="WormBase:CRE29604" /db_xref="WormBase:WBGene00059890" /translation="MGAGWLLASLAFVAVAFAVDTCSKSDCPKMSNTERTFIAVKPDG VHRGLVGKIIARFEERGFKLVALKQLTASKAHLEVHYQDLKDKPFFPSLIEYMSSGPI VAMVWQGLDVVKQGRVMLGATNPLASAPGTIRGDFAIQTGRNICHGSDAVDSANREIA HWFKQEEINDYASPFINSWVYE" gene complement(<1306523..>1307321) /locus_tag="CRE_29827" /db_xref="WormBase:WBGene00059889" mRNA complement(join(<1306523..1306691,1306795..1307093, 1307199..>1307321)) /locus_tag="CRE_29827" /product="hypothetical protein" /db_xref="WormBase:CRE29827" /db_xref="WormBase:WBGene00059889" CDS complement(join(1306523..1306691,1306795..1307093, 1307199..1307321)) /locus_tag="CRE_29827" /note="contains similarity to Pfam domain PF03665 Uncharacterised protein family (UPF0172); contains similarity to Interpro domain IPR005366 (Protein of unknown function UPF0172); coded for by the following C. remanei cDNAs: DR777477, DY527748, DR779457" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12625.1" /db_xref="InterPro:IPR005366" /db_xref="PFAM:(UPF0172)" /db_xref="PFAM:PF03665" /db_xref="PFAM:UPF0172)" /db_xref="WormBase:CRE29827" /db_xref="WormBase:WBGene00059889" /translation="MKYQVETQALPYSTIILHCLKYPSKGVFGLLIGNKKGDKVTVTG CVPLSHESTPLAPPLELATALVHGKFGVSLVGVYFSNSNPSDASLNMYATRLADRITS VTSSPAILVQVMNERLVSDCDQDRLVAYEKDGDSWKETKTIFQGSNFLRGLQAVIQKK LYRELADFENHLDNPEFDFYNTNLSNKLVQVAEFRT" gene <1307951..>1310931 /gene="Cre-hcp-4" /locus_tag="CRE_29605" /db_xref="WormBase:WBGene00059888" mRNA join(<1307951..1307995,1308039..1308245,1308418..1308630, 1308682..1308804,1308855..1309735,1309803..1310338, 1310388..1310558,1310603..>1310931) /gene="Cre-hcp-4" /locus_tag="CRE_29605" /product="CRE-HCP-4 protein" /db_xref="WormBase:WBGene00059888" CDS join(1307951..1307995,1308039..1308245,1308418..1308630, 1308682..1308804,1308855..1309735,1309803..1310338, 1310388..1310558,1310603..1310931) /gene="Cre-hcp-4" /locus_tag="CRE_29605" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8P558; coded for by the following C. remanei cDNAs: DR778966, DR776086, DR775875" /codon_start=1 /product="CRE-HCP-4 protein" /protein_id="EFP12743.1" /db_xref="WormBase:CRE29605" /db_xref="WormBase:WBGene00059888" /translation="MERKHGWRSTIVPGRKAITQIAALHDAGVTEDMSYLNEKSVLDE SSNLNDTHDDDEERALRKKGFSEREINKRLQGQRVEKLAKAHGRLEEQMLGAKTFKEL MEKHEYSERESDDENDTAENITITNKPVFAIPALPKHLSEKSMMGSPVAGTKGSGKAG LSCSTPKSGKDVSMRSLRVLDISHVVNTDQLDYDKVAVHNKNVLIPIVENTEQSSAKM GETFTVRDDQDDNQKHGHVSANEASLQKTFTVDPRTEGDKSESALQKTFTLHPRAEGD KSESSLQKTFTVPGGDQDSTRHSSLQNTFVKSGSNDSLLSNNGKRAQDYTKKIDESVN ADQSGSVIDSSKLAGNCISNELIDRTITENTVEGGEQRRRSNKVGVQERERRHADLNS SLMKSMIEEVPSPGANYFKNPRKKLRPTVEVPPKIISRLSVESDKEKTIEMLSMVEEV SMEAESNGPSFVDPLSVNGSRISPIPEVDKLTNPTNVTPKSNRRNLPIRGNSMETVRV AQANDVSSVITPKLNYLKPTISSLRKHVNEPECDDTLFGTRRDRCTPGKSATTAKTVV QDAPIIEKTPVTGEGVTVKNDQRNDASNRDLSTGLPEETNRPSFNLELEVGDMSIRPS PKRLSANLDSVEPADFDLDLPTVRIENQAGPSNQRSSRNRAALLSDSIATVNTPGYNR TARCRVMNNTNVEESWQSDEDDVIISRRNPGKNVGLQLKKREIIQPDTNNGNRRSTRN RVKPLRSWLGEKAVYKNSPSGGKRLTGVTDVVIKDKRLCKYRTADLKLATEREQRAKA HKKELAARKREQLLRDQQAGRRMDESHYDIHTDDEE" gene complement(<1311270..>1312328) /locus_tag="CRE_29828" /db_xref="WormBase:WBGene00059887" mRNA complement(join(<1311270..1311395,1311445..1311702, 1311811..1311986,1312033..1312219,1312266..>1312328)) /locus_tag="CRE_29828" /product="hypothetical protein" /db_xref="WormBase:CRE29828" /db_xref="WormBase:WBGene00059887" CDS complement(join(1311270..1311395,1311445..1311702, 1311811..1311986,1312033..1312219,1312266..1312328)) /locus_tag="CRE_29828" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8QE89" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12565.1" /db_xref="WormBase:CRE29828" /db_xref="WormBase:WBGene00059887" /translation="MDKVAAPNNDEARVEIPPPIAVPQEKSSAMEKVSIPVEREKNIG ERKTGYEYSIIVINYKPGLKFGLGIKNVYKNVFVIKAEENSLVTGLFNVADRIIDVDG EPVHENQKCKVLLVKALKEKKIASLLIERGITEKALKDATDEMNEEHNQSVMAPPDVR SIMRKLEAHRHLRKSPSLESAAVPGSAVPSALTKNKDGKVERKACILEDGHKSVIIRM DNEENRDKLKKVEPKEPRKVEPKVESKTPPKQEKQEVKPEPKPEATPETKP" gene complement(<1312829..>1315141) /locus_tag="CRE_29829" /db_xref="WormBase:WBGene00059886" mRNA complement(join(<1312829..1312957,1313076..1313149, 1313270..1313416,1313470..1314151,1314203..1314253, 1314311..1314373,1314419..1314668,1314784..1314880, 1314927..1315035,1315079..>1315141)) /locus_tag="CRE_29829" /product="hypothetical protein" /db_xref="WormBase:CRE29829" /db_xref="WormBase:WBGene00059886" CDS complement(join(1312829..1312957,1313076..1313149, 1313270..1313416,1313470..1314151,1314203..1314253, 1314311..1314373,1314419..1314668,1314784..1314880, 1314927..1315035,1315079..1315141)) /locus_tag="CRE_29829" /note="contains similarity to Pfam domain PF00023 Ankyrin repeat; contains similarity to Interpro domain IPR002110 (Ankyrin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12440.1" /db_xref="InterPro:IPR002110" /db_xref="PFAM:PF00023" /db_xref="WormBase:CRE29829" /db_xref="WormBase:WBGene00059886" /translation="MRFTRSQTRRLAGQQKRELTANPIGIDVEDRNNVGESALMRSCM KNNNLEEFNELIKKGADLNSLDLTGNTILSVAVLNRQYDKLEALLEKGANPELESGRE KNRMIHDILHMAFENPRLDSVVHQRFREGTLAMFKMALDWGVDMRARNKKGESGISLL NKLDKLKDENRDMVDEMKKCYEEKLKEANKRIREELNDDKDEGPSPKVAKQNEVEVEE DGIDVRGGVMDELFVTFEVEVENRIANGEKEEEEDEISDEEKKRLEEEGMNKMVEEAL AEKKDKKEMEEDEEEDYEKEENFGDRIEGKQEEEKKLEQGIEEVEEENEEIDEDEQEQ EEKQNNKNEEEENIFEENQEEHLEEGPIEVEQRGEELEQEQGDGPEDRVVQVDQMEYP NCPIEIPLEIPQAEPHADYSGGVQHLLHHPNLLIGAAGVEQIVPEQNLCGLNIQALHA LLSNNCNQFLLQPIALPPVPVAPPSVQYIFPPMEMNLFNLPVAPLIPPTPQPLNPQYN FIPTMAFANNGPMVNLQREPIVEVPPDYSNLFNMDEFNRIYYNYRN" gene complement(<1317633..>1319223) /locus_tag="CRE_29830" /db_xref="WormBase:WBGene00086137" mRNA complement(join(<1317633..1317986,1319044..1319168, 1319217..>1319223)) /locus_tag="CRE_29830" /product="hypothetical protein" /db_xref="WormBase:CRE29830" /db_xref="WormBase:WBGene00086137" CDS complement(join(1317633..1317986,1319044..1319168, 1319217..1319223)) /locus_tag="CRE_29830" /note="coded for by the following C. remanei cDNAs: DR776671" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12593.1" /db_xref="WormBase:CRE29830" /db_xref="WormBase:WBGene00086137" /translation="MEKFKTLLKSVVDSALVNVYERLDNVESRLQRLENQQKMKKRMN ILFSNDDASWDTLINDSFDKFVQGLEKEFRENAEFRKEVLRHERWRVAKKREQIKRNV SEQKQEWAEKQAYAKLQRMRELKKLKKRRKDQRKKVMKIRRQTWIAFRIFVMIFLSEI K" gene complement(<1319405..>1320848) /locus_tag="CRE_29831" /db_xref="WormBase:WBGene00059885" mRNA complement(join(<1319405..1319605,1319656..1319802, 1319848..1320247,1320290..1320590,1320650..>1320848)) /locus_tag="CRE_29831" /product="hypothetical protein" /db_xref="WormBase:CRE29831" /db_xref="WormBase:WBGene00059885" CDS complement(join(1319405..1319605,1319656..1319802, 1319848..1320247,1320290..1320590,1320650..1320848)) /locus_tag="CRE_29831" /note="contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12694.1" /db_xref="InterPro:IPR000215" /db_xref="WormBase:CRE29831" /db_xref="WormBase:WBGene00059885" /translation="MMENEDVLSSLVSKYYESDMFKIMLKSTIKECMKPLNEKVKALE SRLRDLEDKLKVQKELEKAEQTPTPKSQLELNLATHLLNTIDISESFIISPVSIILAI HPFFKSASPQLRLKWAKLFLEGGTPDDMTEYFVDLLSVVRASVLWYEIKRIDGKENDP TIQHLYRNEGYHGLEENVFKDFLSTKLKFIEFESDEMIVNSINYNPIFDEIIHKFFTS KRTFYSTESSPQTMGFMEWRAHQHHFSEDDTFQMIEIQMRQHISLHIFLPKIRFGLRN ALKNLKNGEKLYQLISTAEKKLVNIALPRFNINMETDLASFMRSIGIEKELYDTISEK VYGSIPSFVHKSQFELTFKKHSLEELLYNDDYVDDTDYTGLVHDSAPYCVYFPTKLEF LADHPFLFMLVKDSHVVYFGCYQ" gene complement(<1321295..>1324418) /locus_tag="CRE_29832" /db_xref="WormBase:WBGene00086148" mRNA complement(join(<1321295..1321555,1321729..1322943, 1324254..>1324418)) /locus_tag="CRE_29832" /product="hypothetical protein" /db_xref="WormBase:CRE29832" /db_xref="WormBase:WBGene00086148" CDS complement(join(1321295..1321555,1321729..1322943, 1324254..1324418)) /locus_tag="CRE_29832" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12668.1" /db_xref="WormBase:CRE29832" /db_xref="WormBase:WBGene00086148" /translation="MSDSVKPFAPSPTTTPALSERQPSASSPPQQPSETEEEVRGIVG DEEHYDVERKKVKKPLDCVNRQVTDNNLQENRLEDMKRQIIVFGEEYDNVYQDHFTIE QLNGLCALLKPIVNKMESNQELRNLFFCQKVSSDLYHYCLKQYCLQSSMFLVFTMVGE TREILDEKSDIFELCEKIMGNWKIHNDTEAMKRNSQDMMRRPRSEYHVQRVLNLLDQA DNNTLIGILLDLLDFLTSSQSGIKSLMRHGMFKIVKNYIKKAKKTKTSQRQLFYSSLP EMLLKIEDSDAFEDGLIERLIYSSLEKKPANGTFTYHRSSCFLTSVLELCLAHNQISD AVRGFRLSPQKGSEFALLVFSCAFHVAAQYPDRRINSSILFEMLDGKQYGQKTIMEEM GGMTEYLLIHIINNIGSLRNMFSFRFNRHKKDVLETVDTFVLVLTNRNISNKVLKVED VELVTIPKHLFVHFDTEEKPTIQMLPLELTSIKGGIVFYKLRMFTTKSIENKIAHAIG YVKEDGTWKKYNSGRKEDIHFDGNEVNNFSIGIFELDD" gene <1326024..>1326681 /locus_tag="CRE_29606" /db_xref="WormBase:WBGene00086144" mRNA join(<1326024..1326217,1326267..>1326681) /locus_tag="CRE_29606" /product="hypothetical protein" /db_xref="WormBase:CRE29606" /db_xref="WormBase:WBGene00086144" CDS join(1326024..1326217,1326267..1326681) /locus_tag="CRE_29606" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12643.1" /db_xref="WormBase:CRE29606" /db_xref="WormBase:WBGene00086144" /translation="MAFNRSAPKRKQTFSEDDLPLQFVPYKAYKELYDNFVVLISLVN QLRGAIIDSGQNKLALVVGESTFFSASAYHAFIDTSSKIPRVPAPIAPVATINSLDIA REAAKLLDKATRVVIERMDNPNQESQYLDFFQKLAFTNRLPPPKKAHRHQCSSKFCPL KLQFDSSTDRDNFLLGYHKIHSTDKSLLDIVTKPRVRRDLLL" gene <1329919..>1331924 /locus_tag="CRE_29607" /db_xref="WormBase:WBGene00059884" mRNA join(<1329919..1330044,1330092..1330178,1330230..1330511, 1330676..1331326,1331370..1331618,1331672..1331857, 1331910..>1331924) /locus_tag="CRE_29607" /product="hypothetical protein" /db_xref="WormBase:CRE29607" /db_xref="WormBase:WBGene00059884" CDS join(1329919..1330044,1330092..1330178,1330230..1330511, 1330676..1331326,1331370..1331618,1331672..1331857, 1331910..1331924) /locus_tag="CRE_29607" /note="contains similarity to Pfam domain PF07714 Protein tyrosine kinase; contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12437.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE29607" /db_xref="WormBase:WBGene00059884" /translation="MNSAVSEDKWLVDQKFYHGFLPREDLPYVLKRKGDYIFRVTERK VGKETKRDIVLSVAWPTTPAPLLSAKDIKNFLIERNANSVWLESTVRLASLESLHNHY KNTDIVAQNKEKFKIIRPICLFSWEFKHSQIVLVKKVGQGAYGEVFHGKVKRGAKTFD AAIKAMRSDLEAADEKMKEVMAEARLMRSLNHPNIVRCRGIAVLEQPVYIVIDFITGG GLDSFLKKNGKTLSMDEKNKMAISAAWGIEYMHSNDIIHRDIAARNCLYDKKNLVKLS DFGLSRKGSVYKMKKAMKMPTKWLAPESLTTFTFSRASDTYTYGVLLYEIYTCQEPYF GVNAAEARRLVLSGAFPNFSKHSPPELTDIVRKCIYQLDPLKRASMKEVVKKLEAWLE VELVLDEDQKPEIEHPESNRNNVNSKSPAIEHPAPAGQMAPLPQPIPPPTSAPPPPIK REEEAVKKSMKRKEAKRDSSIETSNSKSKEVKPDGPLPVEPMSVANKMMSSAKRGSDE LLLTPPDEETKPSSKETESDDQK" gap 1333015..1333024 /estimated_length=10 gap 1334425..1334434 /estimated_length=10 gene complement(<1335862..>1338313) /locus_tag="CRE_29833" /db_xref="WormBase:WBGene00059883" mRNA complement(join(<1335862..1336071,1336160..1336330, 1336378..1336769,1336951..1337146,1337194..1337427, 1337482..1337963,1338241..>1338313)) /locus_tag="CRE_29833" /product="hypothetical protein" /db_xref="WormBase:CRE29833" /db_xref="WormBase:WBGene00059883" CDS complement(join(1335862..1336071,1336160..1336330, 1336378..1336769,1336951..1337146,1337194..1337427, 1337482..1337963,1338241..1338313)) /locus_tag="CRE_29833" /note="contains similarity to Pfam domains PF00595 (PDZ domain (Also known as DHR or GLGF)), PF00787 (PX domain); contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR001683 (Phox-like), IPR001478 (PDZ/DHR/GLGF)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12579.1" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001683" /db_xref="InterPro:IPR002048" /db_xref="PFAM:PF00595" /db_xref="PFAM:PF00787" /db_xref="WormBase:CRE29833" /db_xref="WormBase:WBGene00059883" /translation="MMQAYDYDSDESQTTSDEHINSRNSSHSDTASSSSSPPILFNPR PHVVKIVKSDTGFGFNVKGQVSEGGQLRSLNGELYAPLQHVSAVLHRGAADTAGLRKG DRILEVNGLHVEGAAHRNVVDMIKNGGNELTMIVVSVEDPDMDRFDYGEESSMAYGHD YTENRSLPVTIPSYNKVNDALERYTVFNIHMAGRQLGSRRYSEFVELHSALKRHFYDY SFPRLPGKRIFRLNEQELDQRRRGLEQYLEKICTIRVIAESDLVQKFLMECDPMCEVE IRLMLPNATAMSIRTRRSISASLFYTSAHRRLQMSREAAAACAIFELLDNSFERKVNE SESVHELYTHNYSSASSSCLLFRKFLFDIDRERTLCKRDMMFKQFCFFQAIADLHSGK VITTRKNYQLKAIQNEENMDEFLEMARELEGYNQVTFPPSVCILRKRRQTVIMVIRFA NLLLKCPEDGNEMEIEWDRIQDFRVCDEGTAFSFEYLRDSDESNGGENGEETRRKKSK YVKLETGFAEYMADCFAQIHTERQSGSDGKKDQTRIPVPRESAPEPPAPPETNETPPP THKIQFEKRILEQHRDYID" gene <1343467..>1344939 /gene="Cre-tli-1" /locus_tag="CRE_29608" /db_xref="WormBase:WBGene00059882" mRNA join(<1343467..1343502,1343587..1343658,1343895..1344016, 1344062..1344411,1344458..1344553,1344872..>1344939) /gene="Cre-tli-1" /locus_tag="CRE_29608" /product="CRE-TLI-1 protein" /db_xref="WormBase:WBGene00059882" CDS join(1343467..1343502,1343587..1343658,1343895..1344016, 1344062..1344411,1344458..1344553,1344872..1344939) /gene="Cre-tli-1" /locus_tag="CRE_29608" /note="contains similarity to Pfam domains PF00168 (C2 domain), PF02845 (CUE domain); contains similarity to Interpro domains IPR003892 (Ubiquitin system component Cue), IPR000008 (C2 calcium-dependent membrane targeting); coded for by the following C. remanei cDNAs: DT935105, DR779303" /codon_start=1 /product="CRE-TLI-1 protein" /protein_id="EFP12347.1" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR003892" /db_xref="PFAM:PF00168" /db_xref="PFAM:PF02845" /db_xref="WormBase:CRE29608" /db_xref="WormBase:WBGene00059882" /translation="MNTETVAERRRKVLVGELPPHFLRLAVPVQQVAEPEVVQPRLVS FVPPNTRGRLSVTILEANLVKNYGLVRMDPYCRVRVGNVAFDTNVAANAGRSPTWNRT LNAYLPMNVESIYIQIFDEKAFGPDEVIAWAHVMLPLPIFNGDNLDEYFQLSGQQGEG KEGMIHLHFSFAPIDLPLQPEVQPEPEAAPVPLPVEITEEDTKEIQEMFPTVDKEVIK CILEERRGDKEAAVSAILEMTAAADTPTA" gene complement(<1345203..>1346794) /locus_tag="CRE_29834" /db_xref="WormBase:WBGene00059881" mRNA complement(join(<1345203..1345298,1345349..1345493, 1345579..1345670,1345719..1345816,1346701..>1346794)) /locus_tag="CRE_29834" /product="hypothetical protein" /db_xref="WormBase:CRE29834" /db_xref="WormBase:WBGene00059881" CDS complement(join(1345203..1345298,1345349..1345493, 1345579..1345670,1345719..1345816,1346701..1346794)) /locus_tag="CRE_29834" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12456.1" /db_xref="WormBase:CRE29834" /db_xref="WormBase:WBGene00059881" /translation="MFLDDLKTARKVSLAILLATIQLTVIAAFGARWTSGDTYVFVIG THTFLPGVSPPYSTIIPYPNGADWWFGLTAIVMYLVLVLCFLYVAWTIVQIAMPDAIP FDLKMIVFVDVAFSGLLTIMLLIAYCFFAGGFGGKSGLVGIGYGYCFWLAIVSSISSF AVTIISGMSWYRNN" gene complement(<1347377..>1348422) /gene="Cre-him-3" /locus_tag="CRE_29835" /db_xref="WormBase:WBGene00086107" mRNA complement(join(<1347377..1347708,1347752..1347924, 1347973..1348186,1348230..>1348422)) /gene="Cre-him-3" /locus_tag="CRE_29835" /product="CRE-HIM-3 protein" /db_xref="WormBase:WBGene00086107" CDS complement(join(1347377..1347708,1347752..1347924, 1347973..1348186,1348230..1348422)) /gene="Cre-him-3" /locus_tag="CRE_29835" /note="contains similarity to Pfam domain PF02301 HORMA domain; contains similarity to Interpro domain IPR003511 (DNA-binding HORMA)" /codon_start=1 /product="CRE-HIM-3 protein" /protein_id="EFP12379.1" /db_xref="InterPro:IPR003511" /db_xref="PFAM:PF02301" /db_xref="WormBase:CRE29835" /db_xref="WormBase:WBGene00086107" /translation="MSPQPATKQNSQSGNSKWESTFPVEIELEKESYVFVHRFIKCAS AFILYKRGLLGEKCFRTRNIERLLIPTFDRAEPKAERLNKIMDSLKEAIEKKYLRQFA LVFYRKPNEEDIVEVFAFRLMYGKEDEIVLSVDSGAGFEDFNQNLLSATFTSLKETQM YFIDTFKKLCKCFRLLGSLPDASDASFRISFTEAAPNDYMPDGFNESPKFYNIGSDFK STQMGIVCGGFHKLQIAAASTLMKSETDFDETINSMNLSVIAKEPPSSVKSRKGAQKK IARKDQRAPYGKTETLNKRNSVAQEPV" gene complement(<1348684..>1349494) /locus_tag="CRE_29836" /db_xref="WormBase:WBGene00086127" mRNA complement(join(<1348684..1348798,1348841..1349145, 1349191..1349239,1349289..>1349494)) /locus_tag="CRE_29836" /product="hypothetical protein" /db_xref="WormBase:CRE29836" /db_xref="WormBase:WBGene00086127" CDS complement(join(1348684..1348798,1348841..1349145, 1349191..1349239,1349289..1349494)) /locus_tag="CRE_29836" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12545.1" /db_xref="WormBase:CRE29836" /db_xref="WormBase:WBGene00086127" /translation="MSTTKSMKSDSNSSSENEKKTMTPSESTEEQLSFRSPEADRVSI VPECAYSAWNIFIGIFLLFTTIFLTPGEIPSIVTQCFGVLFIFVGLLAFVLIFKSARS IFIVLTVFSAITIVLTMLTIIGFVYTIDGSFPVPELMLKSKNETCSKCFNNAFSDTFL EIVLAGLLLFHIVFNLFSFFIFLKRSCKSQNTLNDEHNQRSFRSSAQAQEKQEKGSAE IIVMDY" gene complement(<1349605..>1350858) /locus_tag="CRE_29837" /db_xref="WormBase:WBGene00059880" mRNA complement(join(<1349605..1349772,1349819..1349940, 1349988..1350081,1350125..1350355,1350400..1350517, 1350559..1350638,1350687..1350775,1350828..>1350858)) /locus_tag="CRE_29837" /product="hypothetical protein" /db_xref="WormBase:CRE29837" /db_xref="WormBase:WBGene00059880" CDS complement(join(1349605..1349772,1349819..1349940, 1349988..1350081,1350125..1350355,1350400..1350517, 1350559..1350638,1350687..1350775,1350828..1350858)) /locus_tag="CRE_29837" /note="contains similarity to Pfam domain PF01529 DHHC zinc finger domain; contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12406.1" /db_xref="InterPro:IPR001594" /db_xref="PFAM:PF01529" /db_xref="WormBase:CRE29837" /db_xref="WormBase:WBGene00059880" /translation="MDACKLFNRFVYFLVEKSLGDVKKFDPFVLLKIVALWGGRICLF IFIASLYAVTYVIFYRIIPTEWSVCESVPYFVFRIILFLYVYYSLVFHYYKARSLEPV KNPGMPSDKFCINCNNWKGPSTSHCKACDRCIYRMDHHCPHIGQCVGAHNQSHFFLFL FYLLIGTGLFFLLAPTFWWEWIQTRKELMEIPKEMCWPPYCFNRFYYLIYRSYGKEDT LIKFCCFLFIMLHWIMWGFVGVYTWIISSGLTMAMRMFQKTDAESRKPFNWITVKARW RKYMNCQEQPLWKVFFIPISRRLVSYQDYKEMIM" gene complement(<1351219..>1352503) /locus_tag="CRE_29838" /db_xref="WormBase:WBGene00059879" mRNA complement(join(<1351219..1351365,1351409..1351798, 1351844..1352041,1352218..1352306,1352428..>1352503)) /locus_tag="CRE_29838" /product="hypothetical protein" /db_xref="WormBase:CRE29838" /db_xref="WormBase:WBGene00059879" CDS complement(join(1351219..1351365,1351409..1351798, 1351844..1352041,1352218..1352306,1352428..1352503)) /locus_tag="CRE_29838" /note="contains similarity to Pfam domain PF01529 DHHC zinc finger domain; contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12513.1" /db_xref="InterPro:IPR001594" /db_xref="PFAM:PF01529" /db_xref="WormBase:CRE29838" /db_xref="WormBase:WBGene00059879" /translation="MRKGEYIQRDRKEKIRERNVETRGKVLGILRFGSKIVGNDDSII NESSLMKVLDKLCITLAVAKTTWIVFFFFTVQLPFDYERLDFFPFTLLRVLCGLWLTY SVPYHYLKARTAEPIQLPKRTPTGPNCSFCTSSKPRLTSHCRTCDTCVYRRDHHCPWM GQCIGIHNQANFFLFLFSVFLSTIFVLYVEYEFWMENVKIWIDKSASSTQWNSKVAGF SLSIIISLHLIMLSFVITYVFLVSGGFALLDMLFQKEGAQKLTLSKIHLRWRQYLAVR RDDSILRALFIPSDRVVRDFDFI" gene <1363130..>1366365 /gene="Cre-tag-68" /locus_tag="CRE_29609" /db_xref="WormBase:WBGene00059878" mRNA join(<1363130..1363236,1363281..1363429,1363772..1363924, 1364078..1364236,1364373..1364555,1364863..1364961, 1365008..1365128,1365174..1365333,1366249..>1366365) /gene="Cre-tag-68" /locus_tag="CRE_29609" /product="CRE-TAG-68 protein" /db_xref="WormBase:WBGene00059878" CDS join(1363130..1363236,1363281..1363429,1363772..1363924, 1364078..1364236,1364373..1364555,1364863..1364961, 1365008..1365128,1365174..1365333,1366249..1366365) /gene="Cre-tag-68" /locus_tag="CRE_29609" /note="contains similarity to Pfam domains PF03166 (MH2 domain), PF03165 (MH1 domain); contains similarity to Interpro domains IPR013019 (MAD homology, MH1), IPR001132 (SMAD domain, Dwarfin-type), IPR017855 (SMAD domain-like), IPR013790 (Dwarfin), IPR003619 (MAD homology 1, Dwarfin-type)" /codon_start=1 /product="CRE-TAG-68 protein" /protein_id="EFP12635.1" /db_xref="InterPro:IPR001132" /db_xref="InterPro:IPR003619" /db_xref="InterPro:IPR013019" /db_xref="InterPro:IPR013790" /db_xref="InterPro:IPR017855" /db_xref="PFAM:PF03165" /db_xref="PFAM:PF03166" /db_xref="WormBase:CRE29609" /db_xref="WormBase:WBGene00059878" /translation="MDCGMWCVFSERRRHVERLWRRRLLVTSDERRARRRFLRLMRGF DAEDVEVIRKAVESDGIDSKACAPGPPMDERVEEDPPDEDSGLIPQIDRPMSMPYLCC KLWRWKDLQVDAALHRLEALPWCRFGRVTINNATVSCCNPYHYALWIRPETNGGDDDG SEDKNSSVHQNNHRSSLIGNGHITYRHRDHTHDAEISKLPKILAGELPDRPPPSVPTA TPPIPDDSPPCTSRSSQDPDDLIHYHHHESNRSWAKMTRYERKEQIGDTVWLHGAFAA VGVLSKSVHDAQLECSPWDLKNEVSFALIRQADPIGSTNPEDVWLYNSGTRPLFLSMT PNVSSTKDTLRRLSPGYCIRVHRGEVSASAPASERTKVRRPSKDPALAQQNLVISVGK GWGPNYSRLYLTDIPCRYEVSFA" gene complement(<1367559..>1368911) /gene="Cre-che-13" /locus_tag="CRE_29839" /db_xref="WormBase:WBGene00059876" mRNA complement(join(<1367559..1367823,1367871..1368004, 1368052..1368249,1368297..1368462,1368508..1368626, 1368867..>1368911)) /gene="Cre-che-13" /locus_tag="CRE_29839" /product="CRE-CHE-13 protein" /db_xref="WormBase:WBGene00059876" CDS complement(join(1367559..1367823,1367871..1368004, 1368052..1368249,1368297..1368462,1368508..1368626, 1368867..1368911)) /gene="Cre-che-13" /locus_tag="CRE_29839" /note="contains similarity to Brugia malayi Huntingtin-interacting protein-1 protein interactor, putative.; TR:A8QCI5" /codon_start=1 /product="CRE-CHE-13 protein" /protein_id="EFP12622.1" /db_xref="WormBase:CRE29839" /db_xref="WormBase:WBGene00059876" /translation="MRRASDSAEGKVTEPGVPIDFTAAKLKSGAGENVIYILSALADA ALVHVGFQWQKMIPPKEEDEDTAVDEQEDDDENEDISEEPTNFLDDDDDDNVIEIDLK AQGLVTESKNPLQSVLQSNTDSIAWKQEVERVAPQLKITLRQDAKDWRLHLEQMNSMH KTVEQKVGNISPFLETLTKDIGKTLERVSTREKSLNTQLSSMMSKFKRATDTRAEMRE KYKAASVGVSSRTETLDRISDDIEQLKQQIEEQGAKSSDGAPLVKIKQAVSKLEEELQ TMNVQIGVLEQSILNTYLRDHFNFSANLLNIL" gene <1369259..>1372072 /locus_tag="CRE_29610" /db_xref="WormBase:WBGene00059877" mRNA join(<1369259..1369292,1369602..1369676,1369720..1370066, 1370384..1370485,1370531..1370617,1370665..1370883, 1371162..1371228,1371276..1371331,1371375..1371552, 1371597..1371727,1371776..>1372072) /locus_tag="CRE_29610" /product="hypothetical protein" /db_xref="WormBase:CRE29610" /db_xref="WormBase:WBGene00059877" CDS join(1369259..1369292,1369602..1369676,1369720..1370066, 1370384..1370485,1370531..1370617,1370665..1370883, 1371162..1371228,1371276..1371331,1371375..1371552, 1371597..1371727,1371776..1372072) /locus_tag="CRE_29610" /note="contains similarity to Pfam domain PF01697 Domain of unknown function; contains similarity to Interpro domains IPR008167 (Protein of unknown function DUF23, C-terminal), IPR008166 (Protein of unknown function DUF23)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12357.1" /db_xref="InterPro:IPR008166" /db_xref="InterPro:IPR008167" /db_xref="PFAM:PF01697" /db_xref="WormBase:CRE29610" /db_xref="WormBase:WBGene00059877" /translation="MILESCGLIFKGKRFVRLFIFIVVCLGFLIAVTILAGLTIFDRQ HNHILHDYVARNDDIVVLSTTYYENSKSFPSNTAVILFNSVQVFHLKYSTLNVVAETM QGNVEVQFKIQPVINTIPFFCKWVPYLAVGQVPEDHVLLKLSTNKKDGMELSLRTPFQ TPRKVVACFSPLFLNERWQLLLATVEIYSHYGAFMHFYVRSMISDLFKLIKENKNSRI APWPAIRIGESRAASPMFDPNTELEFRNQASAMTDCLLQYKESAEFVVFPDPDDILVP TLGKNYHEEFTQAFNMFPTAGAIVYNMTQTSIESSTTPALYSPISLLASIKFKGEQRW GKLVVRPERVDSTWIHRSYSIREGYEQKVMPVDVNAFYHLRIWKFPDFPTINRTKVSN PPYFDPYHLNATKRTIYKVSDGLKIQRKFKNRVSEGNMKAIYSRLPKVSLYYPLIEVC YNRIFYSMKDIGTCRGYSTVELSNQNETFSGPEYCNIPAFPGLRCTNVASEFVTYKSY RNIYIHQLISTDFEEGENGCTL" gene complement(<1372758..>1373571) /locus_tag="CRE_29840" /db_xref="WormBase:WBGene00086147" mRNA complement(join(<1372758..1372814,1373073..1373126, 1373174..1373285,1373335..1373420,1373464..>1373571)) /locus_tag="CRE_29840" /product="hypothetical protein" /db_xref="WormBase:CRE29840" /db_xref="WormBase:WBGene00086147" CDS complement(join(1372758..1372814,1373073..1373126, 1373174..1373285,1373335..1373420,1373464..1373571)) /locus_tag="CRE_29840" /note="contains similarity to Brugia malayi Huntingtin-interacting protein-1 protein interactor, putative.; TR:A8QCI5" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12664.1" /db_xref="WormBase:CRE29840" /db_xref="WormBase:WBGene00086147" /translation="MEEIHEQEESNNHQPDSITAETTEDGPGKEYEIYTRNEELVDKL KLLNYEEGFLKLGVAYKPILKHYFVKSRNVGEQFFLFTSLAAWLIRKSGDDSYNMPQE FDDPNSTIANIMAGAKSKHVHQSGDDEQKQHMRMRK" gene complement(<1374434..>1374958) /gene="Cre-nlp-4" /locus_tag="CRE_29841" /db_xref="WormBase:WBGene00059875" mRNA complement(join(<1374434..1374723,1374766..1374907, 1374953..>1374958)) /gene="Cre-nlp-4" /locus_tag="CRE_29841" /product="CRE-NLP-4 protein" /db_xref="WormBase:WBGene00059875" CDS complement(join(1374434..1374723,1374766..1374907, 1374953..1374958)) /gene="Cre-nlp-4" /locus_tag="CRE_29841" /note="contains similarity to Pfam domain PF01060 Transthyretin-like family; contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /codon_start=1 /product="CRE-NLP-4 protein" /protein_id="EFP12395.1" /db_xref="InterPro:IPR001534" /db_xref="PFAM:PF01060" /db_xref="WormBase:CRE29841" /db_xref="WormBase:WBGene00059875" /translation="MKIILILLAMTAAQAAPLTDFSVYIKGTLLCHEEPYKNRNLEIF SEGERLRYEDDMDRFTKDNGEFSIKAWITTDAYMITPYVMIYHNCWEMKEVPHRCQRK ILQPLMPPNVTVDSKTPNENKLYNFGVIDLQFKHPAEVEVHCG" gene <1375480..>1376344 /gene="Cre-exos-3" /locus_tag="CRE_29611" /db_xref="WormBase:WBGene00059874" mRNA join(<1375480..1375736,1375786..>1376344) /gene="Cre-exos-3" /locus_tag="CRE_29611" /product="CRE-EXOS-3 protein" /db_xref="WormBase:WBGene00059874" CDS join(1375480..1375736,1375786..1376344) /gene="Cre-exos-3" /locus_tag="CRE_29611" /note="contains similarity to Interpro domain IPR003029 (S1, RNA binding); coded for by the following C. remanei cDNAs: DR778545" /codon_start=1 /product="CRE-EXOS-3 protein" /protein_id="EFP12693.1" /db_xref="InterPro:IPR003029" /db_xref="WormBase:CRE29611" /db_xref="WormBase:WBGene00059874" /translation="MFLKCITHLYLNQLILHYLLFHGNNHVNVSDMSIYLPGDVINEP SSSDSSIIGYGINLRGDKRLVTQPGALRSEEGKVWLSVHSKRYIPQEGDRVIGIVTSK TGDFFRLDIGTAEYAMINFTNFEGATKRNRPNLKTGDIIYATVFDSTPRTEAELTCVD DEKRARGMGQLNGGYMFKVSILKLDMDCYLYFVQVSLNHCRRLISPSCKILLTLGNFF KFEITVGMNGRIWINASTTDDIIKIHDILVKSELVTDEDELIAMVQNNYTRSV" gene <1376543..>1377457 /locus_tag="CRE_29612" /db_xref="WormBase:WBGene00059873" mRNA join(<1376543..1376699,1376779..1377341,1377395..>1377457) /locus_tag="CRE_29612" /product="hypothetical protein" /db_xref="WormBase:CRE29612" /db_xref="WormBase:WBGene00059873" CDS join(1376543..1376699,1376779..1377341,1377395..1377457) /locus_tag="CRE_29612" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PQ04; coded for by the following C. remanei cDNAs: DY527863, DR779809, DY524725, DR409747, DR408486, DR408301" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12666.1" /db_xref="WormBase:CRE29612" /db_xref="WormBase:WBGene00059873" /translation="MGESLVEQRQADDKASWDAYWKVRDVDSRGSIYPRFRYYAHKAF DAPATWFREKVVQPLNNRNRLPYYHRQLNRVPEIDECGVNDKACFYEANEQYRLDKMV DGFILQTLRQRVDRCMLYNNPDHSPCAKVIEDMEENELNFFIKYGEMGGEADVRDAYM KQKHRMIWERRHPEIMEERSAKLADHKERLANGEFDYSFWKKGMFYQDKKNYEPPYEF YMSKSPLEGDKPLSKDWQYYKNVSQDPEFDKEQGKKSDFRLF" gene <1377685..>1378390 /locus_tag="CRE_29613" /db_xref="WormBase:WBGene00086155" mRNA join(<1377685..1377743,1377788..1377870,1377918..1377979, 1378026..1378175,1378208..>1378390) /locus_tag="CRE_29613" /product="hypothetical protein" /db_xref="WormBase:CRE29613" /db_xref="WormBase:WBGene00086155" CDS join(1377685..1377743,1377788..1377870,1377918..1377979, 1378026..1378175,1378208..1378390) /locus_tag="CRE_29613" /note="contains similarity to Drosophila pseudoobscura GA15575-PA (Fragment).; TR:Q28XA6" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12696.1" /db_xref="WormBase:CRE29613" /db_xref="WormBase:WBGene00086155" /translation="MNITFARSLYTQGQYNGKIREYFYYISHNGFLFLDDSRMKNFTA AYKDVPFLNFFYARIKENKTGRYEDTFPWVSLCGIERNFLRCDDTPLVYTELDPTEQS LKVGQSSIQYPFEVHQPSTLSMTSTGRVYHKSSIGGKALVADKLTDKLYHRFRFDKDG NPIGFEFENQIVRLNDVK" gene <1378787..>1383298 /gene="Cre-mus-101" /locus_tag="CRE_29614" /db_xref="WormBase:WBGene00059872" mRNA join(<1378787..1378828,1378874..1379008,1379059..1379195, 1379242..1379374,1379424..1379534,1379578..1379721, 1379789..1380021,1380136..1380646,1380673..1380916, 1380961..1381078,1381205..1381394,1381444..1381994, 1382039..1382252,1382311..1382463,1382522..1382881, 1382931..1383122,1383170..>1383298) /gene="Cre-mus-101" /locus_tag="CRE_29614" /product="CRE-MUS-101 protein" /db_xref="WormBase:WBGene00059872" CDS join(1378787..1378828,1378874..1379008,1379059..1379195, 1379242..1379374,1379424..1379534,1379578..1379721, 1379789..1380021,1380136..1380646,1380673..1380916, 1380961..1381078,1381205..1381394,1381444..1381994, 1382039..1382252,1382311..1382463,1382522..1382881, 1382931..1383122,1383170..1383298) /gene="Cre-mus-101" /locus_tag="CRE_29614" /note="contains similarity to Pfam domain PF00533 BRCA1 C Terminus (BRCT) domain; contains similarity to Interpro domain IPR001357 (BRCT)" /codon_start=1 /product="CRE-MUS-101 protein" /protein_id="EFP12468.1" /db_xref="InterPro:IPR001357" /db_xref="PFAM:PF00533" /db_xref="WormBase:CRE29614" /db_xref="WormBase:WBGene00059872" /translation="MSVPPAPKKSRRNESNMIEEDSVICDDDNDDSSCTMYFVKLPDG KPTEQEDENFLDAYNIAKDSGVMPEWMDSESLDRIQSSDDFFIVPCFRGKLFRRMLEK KFKIYGPPILRECIDEQKPLPLWNHPVFSSVFEGAKLTLTSFEPEKKLELYQKIGWMC GIASGDLYHETTHLLASRAEQTNKYKSAVSNSVKLMRKEWVEELWETSQTTMGKFSAL SRDAVNSYRLRVFEGLEMAITSIDGTDRANLMQLVEEHGGKVYGNMSKPRCTHLISDK TSGKKYTKAVEWKTIKIVQTRWIRKCIDLGHLIDETKYHPKYLTAEHMRSSTPKKNTT VNESVPDVSAISGNGGRLCTSSFNVSSAMTPVDKSSRRQSGSYVSTTSTSIVASTTIM STDITIGRTSAARKHDQLYDFSYRMFFHKYQVSSSTPLARQSSIPLARIPTTQSISTQ DPADSALDPIDELRKLIDEGHSDLFEVSCIIYNCLFYICGVDEKRMEKWRRFLNETGA TRAPKFESATNVVVIAPNQQERMALRKFMQQEDIAIVTAQWVVECVKRRTMVPADGFV WTENIMDESQWQSQNDDYAQTGMSQPNKTSSIEFIFANHTYGVHPSSFGRDDAKKLSE NIRELGGQIERTLEKAEFVVFGHSATMHELLVYDTVVTDFYIDSCRTEGYRAGPKKHP LFVPLPKPPIQIFSHCRFFLICSLSSHSHLCKYVGAIIRTNGGAVIDEMDSKAYKIMI TKGPIDEPQHRARTADYSWIIASVSRGSLLPINNYLYKENAEPLLNFQRDDDVWMKIQ ERDTTEELEQEIEDRHKVQDKPVQTREGKKTDLSTPYVNPYFPDLRKPYKMNLNLDNA NEYIDNMESPARDTQESITNSRVGSILRKAVINTGRRTEKENEPATCQVLNSRVAMTE NRRTVSSTPVLVREIDRAARYMAMDESFAEQNQEHEELNRQYAMQPRFLLSVSSMNPQ EIQELQEAIKQLGGRIEKEYNRDVTHLIASNMQRTPKVLCSIAAGKWCLTPDYVTQST ASGRWIDEKRFEWSYDKLPKVSEKENHPKDRDNRKILEKLVSVCRLWRTKIEQMPITS SVSMESRVNGAFTGWRCVIHEEDKKTLQVASILEAGGAVVYYISEYIQISSIKPNRVF AFKDFNWNIQSAAMLKRDNMPLYIIEIIYEYLVDKDNLDCSKYLHSSYKRAC" gap 1384229..1384591 /estimated_length=363 gene <1385418..>1388025 /locus_tag="CRE_29615" /db_xref="WormBase:WBGene00059871" mRNA join(<1385418..1385809,1385853..1386080,1386254..1386443, 1386500..1386621,1386668..1386866,1386912..1387051, 1387098..1387581,1387629..1387748,1387794..1387900, 1387947..>1388025) /locus_tag="CRE_29615" /product="hypothetical protein" /db_xref="WormBase:CRE29615" /db_xref="WormBase:WBGene00059871" CDS join(1385418..1385809,1385853..1386080,1386254..1386443, 1386500..1386621,1386668..1386866,1386912..1387051, 1387098..1387581,1387629..1387748,1387794..1387900, 1387947..1388025) /locus_tag="CRE_29615" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12533.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE29615" /db_xref="WormBase:WBGene00059871" /translation="MFHNVCVIVHGCSAYILNNSERALTIGKKTSRRVTQPHISLFSS TLCVSRLEKRSPSLVVQPSPAHARSTDRFFRTFNHLVLELINLNIPFTDASKYHLVVS TMAEVITLSDDDDDIIDITPKPAPVVLRTSTSLNQVDNSLGATAHISTVSKINLEQFG IRTLANVLGRNQSSSQNAGFNPLQSYALPPVIAHTSFQNSIPRALKRPSPSPAVPNVS HQSTPSLRQRNSQNTTVPAVYNGHYMFEATEGYEPSRRSSRFSTKKLEGQFVCSFNAA KCYKLCDSVVGFINHLWSHIVYDPPFIPRKKKETQTQVRIPSNFHDTAALSKWSVLAL KKIRTCEYCQAVFKTIYLMHQHRSKCHFDQDKTKTICNICEINFESTSILEAHKRKHI SGEAPYKCKKCNYRTSVRAYFYEHFIERHINETLVCPICLYQEELRPTARRSKHIFVN SFVEHMQRHSTSAQYRCHMCSLTFNDRASLDYHRGQDHTLLDPLWQVHERPKIHEKVQ VERMSNPKKISILQKKFLQTPEGHRISNEVACDEDEERQGYDLTCTGNTLFECECGFS SWNGNRAASHYHRCRKTIKCVFKDIERDKGLIRNDGDPKDELDIFAVYPQPTLQEEEA EALQEAALQKLHLKKDAPIKLRTDTIVYPEDEDFLLLKVFSTNKESDAIIARCIASIV TEDD" gene complement(<1388246..>1388770) /locus_tag="CRE_29842" /db_xref="WormBase:WBGene00059870" mRNA complement(join(<1388246..1388293,1388391..1388483, 1388536..1388640,1388693..>1388770)) /locus_tag="CRE_29842" /product="hypothetical protein" /db_xref="WormBase:CRE29842" /db_xref="WormBase:WBGene00059870" CDS complement(join(1388246..1388293,1388391..1388483, 1388536..1388640,1388693..1388770)) /locus_tag="CRE_29842" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12352.1" /db_xref="WormBase:CRE29842" /db_xref="WormBase:WBGene00059870" /translation="MEEKDDYDVFIEEAENVIEHYTAGEDVQYELNRLLERALLVDPI NAPCRDAEAINAYNLLKRAIDTESPINIPITPIIRQRQRSHSSNDHNNLNLPYIPDFL FSFVL" gene <1389054..>1389909 /locus_tag="CRE_29616" /db_xref="WormBase:WBGene00059869" mRNA join(<1389054..1389138,1389188..1389651,1389736..>1389909) /locus_tag="CRE_29616" /product="hypothetical protein" /db_xref="WormBase:CRE29616" /db_xref="WormBase:WBGene00059869" CDS join(1389054..1389138,1389188..1389651,1389736..1389909) /locus_tag="CRE_29616" /note="contains similarity to Pfam domain PF07160 Protein of unknown function (DUF1395); contains similarity to Interpro domain IPR009829 (Protein of unknown function DUF1395)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12701.1" /db_xref="InterPro:IPR009829" /db_xref="PFAM:PF07160" /db_xref="WormBase:CRE29616" /db_xref="WormBase:WBGene00059869" /translation="MESFMDSLNTENIEKFSMFRENIPNFDATLTPITKSMNNIKVLL EDITNTRKKLVDPCEETCTSCSIDELYKFLGIEVTPVTNQMESCAQSSEKSNTTDKEE VKNKDELSKNVEKEIRIVAQISEQEFKTIPKYQLGRLTLDNLNEIVGKMDEFLTKKNN ILSKTNRQLTRIDREMLDSWRELEIKAKGRLPTTLFFIENDIRPLLQERLRPSFAKAI PCLRHIRRVREERCGPLTFYYS" gene <1390161..>1391076 /locus_tag="CRE_29617" /db_xref="WormBase:WBGene00059868" mRNA join(<1390161..1390256,1390302..1390419,1390527..1390741, 1390796..1390930,1390978..>1391076) /locus_tag="CRE_29617" /product="hypothetical protein" /db_xref="WormBase:CRE29617" /db_xref="WormBase:WBGene00059868" CDS join(1390161..1390256,1390302..1390419,1390527..1390741, 1390796..1390930,1390978..1391076) /locus_tag="CRE_29617" /note="contains similarity to Pfam domains PF00018 (SH3 domain), PF00023 (Ankyrin repeat) (3)contains similarity to Interpro domains IPR001452 (Src homology-3), IPR002110 (Ankyrin); coded for by the following C. remanei cDNAs: DT937024" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12435.1" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR002110" /db_xref="PFAM:PF00018" /db_xref="PFAM:PF00023" /db_xref="WormBase:CRE29617" /db_xref="WormBase:WBGene00059868" /translation="MSTARPMAPPPPAPKPGRVKVFRALYDFQARSDQELTFSEGDLM YVSDEQPNKDWFQASIGGKKGLVPANYVISENMEELPNPLHEAARRGNMDMLCECLRE RVSVNSLDKSGATPLYWAAHGGHVTAVDTLLKDKKVAVSVQNKLGDTPLHAAAYKGHV ECVRLLLTAAASPFIRNQDQKLPIDVTKDADIAALLDKAMKENRVNEEDYSEYLSDSD AD" gene complement(<1391316..>1391784) /locus_tag="CRE_29843" /db_xref="WormBase:WBGene00059867" mRNA complement(join(<1391316..1391657,1391704..>1391784)) /locus_tag="CRE_29843" /product="hypothetical protein" /db_xref="WormBase:CRE29843" /db_xref="WormBase:WBGene00059867" CDS complement(join(1391316..1391657,1391704..1391784)) /locus_tag="CRE_29843" /note="coded for by the following C. remanei cDNAs: DT937310" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12618.1" /db_xref="WormBase:CRE29843" /db_xref="WormBase:WBGene00059867" /translation="MAHVESFYLDANLESDAATLPVTENDLMEAQFIADSPLNDDAIT RIVGAQLKFERNSQVVSDYCVEAQQSMELENPNLVAMSSSILDNHKYFAPSQNTDASQ YVWNPTDAVSSHHQYVAQSPNIYTNDYMTSEPSDYVYM" gene <1391983..>1395578 /gene="Cre-duo-3" /locus_tag="CRE_29618" /db_xref="WormBase:WBGene00059866" mRNA join(<1391983..1392212,1392285..1392379,1392424..1392514, 1392861..1393049,1393168..1393344,1393397..1393625, 1393678..1393979,1394030..1394164,1394234..1394641, 1394688..1395312,1395363..>1395578) /gene="Cre-duo-3" /locus_tag="CRE_29618" /product="CRE-DUO-3 protein" /db_xref="WormBase:WBGene00059866" CDS join(1391983..1392212,1392285..1392379,1392424..1392514, 1392861..1393049,1393168..1393344,1393397..1393625, 1393678..1393979,1394030..1394164,1394234..1394641, 1394688..1395312,1395363..1395578) /gene="Cre-duo-3" /locus_tag="CRE_29618" /note="contains similarity to Pfam domains PF00443 (Ubiquitin carboxyl-terminal hydrolase), PF02338 (OTU-like cysteine protease); contains similarity to Interpro domains IPR003323 (Ovarian tumour, otubain), IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2); coded for by the following C. remanei cDNAs: DY527715, DR776285, DR778341" /codon_start=1 /product="CRE-DUO-3 protein" /protein_id="EFP12534.1" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR003323" /db_xref="PFAM:PF00443" /db_xref="PFAM:PF02338" /db_xref="WormBase:CRE29618" /db_xref="WormBase:WBGene00059866" /translation="MTDKFVVDVTIFANTSEKMLITLKDHRIKFEGRTIKVLKASSFE TVREFDSSLLLNKPLKHPDVRERTVLSIQFASSPGLKLAFHNSNRDYAQYVVEEYNKF LEANKDKVQQVRAKTTHVPTVGPQRSITSSVPTKENQYQEYAPKIPVMKPSVSANSYS PSPKRKPLLPPVSSISPRNFNVAPGSAQKPSTSSGNPNIYKREPNTSSTKSPGQHARV SQLRSNEKLATQNGSRNGLQNSADAHREKLNMLMPETIPRKKGLKNTGNSCFFNATMQ AFASSPSIVSRCNQLSRVTSMYSRVFNVEDDSIMKFKLNVFEGFLTMIQHLTRTPDIV SIQKLKEIRRSAGFLVGRFHTPEQQDVHEYLLLVIDCINDVIKDKVKSPPDVKSNESP VFVKALAGLNPMHAIQSITEKEYQCVNCSKKSVESVSNLIVQLAIDETRNGSIELGDL LDVYFATESLDKRCSSCNTEDAFVRERFVKFSPCIILNPLRTQHSGGEDGSRKDSRQI NVPLKLDLTKFTSFAKVCKSDENLNLNGVGTPQISSSKITSTKNLMLNGGMKCSSPFK VLGGAKEPSEDDDIQFDNEIINNPFYFELISCPEELKKMARLLGIKYNKKFMEYHVSI LKEKPSTDMKKNDYPDEKSVIDGDGNCFFRAISWFLTGTEGHHKQVRKVLVEYMKNNQ SALEKHCTAPSYERHVRDMSKDATWATGCEIAAISKLLNVNIYTFLPSGWSLQQPQTG VASKKGSIYLNNLSEHYEPVTSLKKHGADSRDRRAHKRRCVRDGGEEGDAEISKNAES SSKNKTITPAKLPTKQKPTRSCNTEKKPKEADPSELCIYQLIAAICHIGNMKFGHYYA YTKNLNDDKWLKCDDHKITDVSVGEVIDAVSYRCHLLFYERQ" gap 1396719..1396728 /estimated_length=10 gene <1397543..>1400973 /gene="Cre-duo-1" /locus_tag="CRE_29619" /db_xref="WormBase:WBGene00059865" mRNA join(<1397543..1397772,1397825..1397916,1397981..1398257, 1398336..1398446,1398501..1398770,1398814..1399075, 1399120..1399400,1399455..1399577,1399628..1399993, 1400036..1400693,1400758..>1400973) /gene="Cre-duo-1" /locus_tag="CRE_29619" /product="CRE-DUO-1 protein" /db_xref="WormBase:WBGene00059865" CDS join(1397543..1397772,1397825..1397916,1397981..1398257, 1398336..1398446,1398501..1398770,1398814..1399075, 1399120..1399400,1399455..1399577,1399628..1399993, 1400036..1400693,1400758..1400973) /gene="Cre-duo-1" /locus_tag="CRE_29619" /note="contains similarity to Pfam domains PF00443 (Ubiquitin carboxyl-terminal hydrolase), PF02338 (OTU-like cysteine protease); contains similarity to Interpro domains IPR003323 (Ovarian tumour, otubain), IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2); coded for by the following C. remanei cDNAs: DT934478" /codon_start=1 /product="CRE-DUO-1 protein" /protein_id="EFP12639.1" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR003323" /db_xref="PFAM:PF00443" /db_xref="PFAM:PF02338" /db_xref="WormBase:CRE29619" /db_xref="WormBase:WBGene00059865" /translation="MTDQFVVDCYFVGKGGTNIHFQNRRLKFAPAHLEILSPKPDEAP RILPCTQFQFKILKAGKKHLNFLLVPETEKGYLSLKMTFKPEYEQFIEWVTEQFNKMI KENKDKMQSKKPKSKQVPLIVSTEVLNKDIYQIRPIYNEKNCLAELERQRSQSRAMNV SPVSQQTPPKQLPSLGYMKQLVSRSDAIDSFTNTFPAKKEEPDVTLYKAAKSNRSQNA SPMDFEPFETPVERLPKREEPVESYFTPEKSNRIEIGSPTDMSPPAKPKISKPGKLDN EVPSKSISVVSEIKCLTDSPDLDKEFKENISEKNCSTPSPSPTKDEFRNRRLENTGNS CYFNATMQALSACHPMISRCRILKLTEKDKNNFFENQKYSTTKLEQKYTLFADMLDMM STLSAREEIVENNMILRRMTRSRLTRIRQNLGRINHDFDNDNQQDAHEYLLMLLGSVD DVIEANRKKSKTMKGKSIALLNPSKVFEYEVETLYACQSCHKTERKSDYRSDLSLNVS ENCYVQKLLSSLSEWSPVEKECSYCKETRSSACERISKFPPSLIMNLRLYEMQETEGI TKKKDCSVNDAFEIDLSSLRSHTEPENFDMNQYNFVERPASSSLKFEDLKPDENGNAS QEESQNDIIIESVKKSKDLYFEPLSDIEDVKEILGKLNIAFCEKSVRSHLDSLKLPVE KMSRSDSPAETAMIKGDGNCFYRAISWCLTGSEKFHRRLRLATAEYLKNNEENLKKYC KEKNYENYVKKVEKNSEWAVSCEIFAMANMLNIEILTFLDRRWVSHIPRGGGSSSGGS IYLNNKFHHYEPTTSLSKSCSQNTDSQSSALQQNVANKTSRCGSKRKADDNESEEDTL ERRNKIHTAENGEISECKIDQENCETMTAQERDTHAPEDVKYNLVAVVCHLGDSPHRG HYVAYIKDPNKSSKWIYCSDNDIEEVKREHVEVSIRTSGYVLFYDRQ" gene complement(<1403858..>1404468) /locus_tag="CRE_29844" /db_xref="WormBase:WBGene00059864" mRNA complement(join(<1403858..1404123,1404169..1404314, 1404410..>1404468)) /locus_tag="CRE_29844" /product="hypothetical protein" /db_xref="WormBase:CRE29844" /db_xref="WormBase:WBGene00059864" CDS complement(join(1403858..1404123,1404169..1404314, 1404410..1404468)) /locus_tag="CRE_29844" /note="contains similarity to Pfam domain PF04241 Protein of unknown function (DUF423); contains similarity to Interpro domain IPR006696 (Protein of unknown function DUF423)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12492.1" /db_xref="InterPro:IPR006696" /db_xref="PFAM:PF04241" /db_xref="WormBase:CRE29844" /db_xref="WormBase:WBGene00059864" /translation="MAQIISDVVHTVSDFLPIKRFAALFPAVASSPTVESLILPPAID MSPFIRLAGLSGAAAISLGAYGSHVLRDDPSIEERRRTAFDTASRYHLIHSVALLASP SARFPLLTAGLFTTGMLLFCGTCYHYSITGIESTRKYTPIGGVTLIIAWLSFIL" gene complement(<1404696..>1408147) /gene="Cre-sec-8" /locus_tag="CRE_29845" /db_xref="WormBase:WBGene00059863" mRNA complement(join(<1404696..1404831,1404878..1405063, 1405108..1405400,1405445..1405543,1405587..1405922, 1405965..1406117,1406161..1406394,1406438..1406575, 1406627..1406749,1406796..1406888,1406930..1407169, 1407217..1407359,1407438..1407526,1407579..1407717, 1407764..1407826,1407878..1408016,1408070..>1408147)) /gene="Cre-sec-8" /locus_tag="CRE_29845" /product="CRE-SEC-8 protein" /db_xref="WormBase:WBGene00059863" CDS complement(join(1404696..1404831,1404878..1405063, 1405108..1405400,1405445..1405543,1405587..1405922, 1405965..1406117,1406161..1406394,1406438..1406575, 1406627..1406749,1406796..1406888,1406930..1407169, 1407217..1407359,1407438..1407526,1407579..1407717, 1407764..1407826,1407878..1408016,1408070..1408147)) /gene="Cre-sec-8" /locus_tag="CRE_29845" /note="contains similarity to Pfam domain PF04048 Sec8 exocyst complex component specific domain; contains similarity to Interpro domain IPR007191 (Sec8 exocyst complex component specific domain); coded for by the following C. remanei cDNAs: DR407712, DY526319, DY526384" /codon_start=1 /product="CRE-SEC-8 protein" /protein_id="EFP12380.1" /db_xref="InterPro:IPR007191" /db_xref="PFAM:PF04048" /db_xref="WormBase:CRE29845" /db_xref="WormBase:WBGene00059863" /translation="MNGNGAAPVAAARRQRPMPTERSAVTSNETGLLINVIRSLTSSV SEDQREVEKSRLEKGYKESGVLIDRLVKNHQQDVEKCLVSFRDVSSKISNCRERIHNV RNALHTVKSLLELRRDDLKKLWHENAQQKSVCEIMAKLEELREAPSKIENLISKEQYQ QAADTVTESRDLINGRLSRVEGLSHLSAEIERFTKILIDRINDSLVNMLVVEPFEKHL LHILRTIPEHRINQNSYCLSLLTKSRNNSGSGSSFNNAKAKSRIVSSVGALSTILRTS EERNWDVDRLMMLGKNMIDKMIVNTVQVMKIGANIDESNEGDTTHLKQLMQLLSAQFD SASQQHAEFGVLVEKKLGRIDVLTSFWRSAQSAIEVVVSEHLDINPLLEKQNVLGTVN RKQLFRFENTACAAPNTNSSSHQAKALICKPSAYNIKVIFPILSRMMETTEKNINDSP CELRRFMHSFVMRVFVERVKGELASRIEGALRGGEAVRISTNKKILPSCEKVLSLCKD IHDLIISIDLYADRFAALWILVLTDYFKNMTDVYEKMTPKTSDPSLPSSDTIPTRCQK ISAAWTADDDISRLLMSLPNWHTASISPMTPAAESEHDVGERNKRESEILIGNLGTQA QNSLNESNLIIDMNDIKMFASLHESLRWFSEEIRELVHSLPANVKMMLDTCMVQVQLK DGQMIDNNSVPSAIEDCVRRLESIADSCLLLLHIEIRVHCFFHLAPLAKYRNTSSHNE VDPEVVALGKDLHQFHDNLKDVLSPSKLAYVFDGLGHLCASLFIHYSQFMPRLTEAAK KRVCRNVWGVQQRLSRITNRRELDLDRARAFFDLLLDNTPDGILAIVPEKRSLFTATE LNYLLALSVRSDKALSNQPGALEKRQMILNSILNQKK" gene <1408800..>1410303 /locus_tag="CRE_29620" /db_xref="WormBase:WBGene00059862" mRNA join(<1408800..1408919,1408966..1409214,1409365..1409562, 1409611..1410108,1410166..>1410303) /locus_tag="CRE_29620" /product="hypothetical protein" /db_xref="WormBase:CRE29620" /db_xref="WormBase:WBGene00059862" CDS join(1408800..1408919,1408966..1409214,1409365..1409562, 1409611..1410108,1410166..1410303) /locus_tag="CRE_29620" /note="contains similarity to Interpro domain IPR011990 (Tetratricopeptide-like helical); coded for by the following C. remanei cDNAs: DR780827, DR781152, DR777249" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12541.1" /db_xref="InterPro:IPR011990" /db_xref="WormBase:CRE29620" /db_xref="WormBase:WBGene00059862" /translation="MESKEDKKSSATSHSHLTRPEFELIVEGDNGGAAYDSEDNLQTA ADCIRMMEGVRDEADLTEIMEKFRRKTEKGEMTGLSSTATTVSSSMASQWINHMKRSF KRHAIALSEEQQGVLKKMVNEELYPQHGSTDLAIRDILMLYSRGLEAHHDGCYREMFH RIRPCIPYFNTNVLVWIRVSEALIYEFYEEVWEFKDSYKRLFAGCDRRYVASLRRRCN ELKARHPDMNLRFAETATLMTFALAKHSSREPVHYAAATLHGFLLLKLKKYTEAIETV NFILMKYDKTGECVDSLTLLLTYKAEGMIGIGRYNRAIEYCLRVVATTTTVRAKHRAL MLITMAYMRKNNFKKAHEYVILLLSDGQLDENMLENVALLGLNLAHLMGNMELFKRFE KMLQRIVY" gene <1410561..>1414275 /locus_tag="CRE_29621" /db_xref="WormBase:WBGene00059861" mRNA join(<1410561..1410610,1410658..1410768,1410822..1410958, 1411011..1411177,1411220..1411301,1411349..1411473, 1411523..1411649,1411697..1411849,1411894..1412513, 1412559..1413002,1413047..1413469,1414099..>1414275) /locus_tag="CRE_29621" /product="hypothetical protein" /db_xref="WormBase:CRE29621" /db_xref="WormBase:WBGene00059861" CDS join(1410561..1410610,1410658..1410768,1410822..1410958, 1411011..1411177,1411220..1411301,1411349..1411473, 1411523..1411649,1411697..1411849,1411894..1412513, 1412559..1413002,1413047..1413469,1414099..1414275) /locus_tag="CRE_29621" /note="contains similarity to Pfam domains PF01266 (FAD dependent oxidoreductase), PF08669 (Glycine cleavage T-protein C-terminal barrel domain), PF01571 (Aminomethyltransferase folate-binding domain); contains similarity to Interpro domains IPR006076 (FAD dependent oxidoreductase), IPR006222 (Glycine cleavage T-protein, N-terminal), IPR016040 (NAD(P)-binding), IPR013977 (Glycine cleavage T-protein, C-terminal barrel)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12737.1" /db_xref="InterPro:IPR006076" /db_xref="InterPro:IPR006222" /db_xref="InterPro:IPR013977" /db_xref="InterPro:IPR016040" /db_xref="PFAM:PF01266" /db_xref="PFAM:PF01571" /db_xref="PFAM:PF08669" /db_xref="WormBase:CRE29621" /db_xref="WormBase:WBGene00059861" /translation="MIGHRLAKWRLSRSYTTAVANADVVVCGGGISGTSIAYHLAKRG KKVALVEKDSIGCSGATGLSAGLVSAPIFWQDTSLQAIAQASLDLYSHLAKTCKFRYV KCGRTYLASSMANEILLRRMYSRGVVHNDKVELLDCQSEMLERWPFLQTEDVQLALYS PEDVALDPVALCQHLALIAKDHGALIYESNPVLEVHIGDEKQVYGVSTKMGFIETSHF VDAAGIWAGSHLVKALPHQHVQTAAYPCTYSYIHTSKLPTGSVSDMTPIFNDLDGNIM LRTTSFKTLCAGFSEESIRPLARQTGSATPWQHPEPDWNVFDSNLEKLISRCPMLGEC NHGDLIVGMEAYTPDKLPTIGESSQAKGYWVMCGMNGQGLSLAGGLGKVLGELMCESQ SSTADVARVDVGRFIDLHANSQYLIGRTPEVAALTYSNLYHSHQCHTARNLRMAPIYH QLRDAGAVFGEIMGYERPLWFEKTAKSERNALMSGQDSLVGKPDWFERVASEYEACRE RVGLMDMSSFSKYDITGEDAVEYLQFLCSANVDEPIGTTVYTGMQHQKGGYVTDCTLS RLGDKKFFMVAPTIQQERVLVWMKKWQAILKARVHVQDVTGAYTALDMIGPSSRYLMG DITGLSMSSNDFPTFRCQEINIGMATGIRAISVTHCGELGWVIYIPNEVAQNVYEKIL EAGKEYSLQHAGYYTLRQLRIEKFYVYWGQDINATVTPVECGRLFRVDFKVRSIFSFF MRESGEFQKDFIGKKALEEQVERGVSKRFVQLLVDGHDKETDPWPQGGETILKDGRPV GLTTSAAYGFTLGCQVCIGYVENKEFGVSPEFVSSGHFEIDIAGKRFSCRLNVHSPSL PMISSEHPLHYRPTQ" gene <1415107..>1415926 /locus_tag="CRE_29622" /db_xref="WormBase:WBGene00059860" mRNA join(<1415107..1415223,1415269..1415464,1415511..>1415926) /locus_tag="CRE_29622" /product="hypothetical protein" /db_xref="WormBase:CRE29622" /db_xref="WormBase:WBGene00059860" CDS join(1415107..1415223,1415269..1415464,1415511..1415926) /locus_tag="CRE_29622" /note="contains similarity to Interpro domain IPR006578 (MADF)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12542.1" /db_xref="InterPro:IPR006578" /db_xref="WormBase:CRE29622" /db_xref="WormBase:WBGene00059860" /translation="MDQWTHQNHQSHQNHQNHQNQTTSSAPPSHAHMGHVAVQPKEEV QYMMRQVTDSVRFAMCEAISHRTPLWDSSREKCSSATRKRLFGEVVDVINSQFVLSPP LSIEEVEKHWKNLKDTYVKTRRKITYDQDGCLIRPKWKFFDSLMFLDAVNQPDFALKK RAVSMTFPAQSYDMYQGPTMKKEKLEEIPTDEYMEFCRSIYLPLKEIGYKDRVRWLKI QKTFRDIIYEAQLESAVKPPVDMQ" gene complement(<1415994..>1416563) /gene="Cre-rpl-30" /locus_tag="CRE_29846" /db_xref="WormBase:WBGene00059859" mRNA complement(join(<1415994..1416168,1416213..1416361, 1416540..>1416563)) /gene="Cre-rpl-30" /locus_tag="CRE_29846" /product="CRE-RPL-30 protein" /db_xref="WormBase:WBGene00059859" CDS complement(join(1415994..1416168,1416213..1416361, 1416540..1416563)) /gene="Cre-rpl-30" /locus_tag="CRE_29846" /note="contains similarity to Pfam domain PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; contains similarity to Interpro domains IPR004038 (Ribosomal protein L7Ae/L30e/S12e/Gadd45), IPR000231 (Ribosomal protein L30e); coded for by the following C. remanei cDNAs: DR406388, DY529285, DT934936, DT936478, DY525977" /codon_start=1 /product="CRE-RPL-30 protein" /protein_id="EFP12623.1" /db_xref="InterPro:IPR000231" /db_xref="InterPro:IPR004038" /db_xref="PFAM:PF01248" /db_xref="WormBase:CRE29846" /db_xref="WormBase:WBGene00059859" /translation="MAPAAKPQVKKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGK AKLVIIANNTPPLRKSEIEYYAMLAKTGVHHYNGNNIELGTACGRLFRVCTLAVTDAG DSDIILSVPSESA" gene <1417577..>1419732 /gene="Cre-pab-1" /locus_tag="CRE_29623" /db_xref="WormBase:WBGene00059858" mRNA join(<1417577..1418107,1418127..1419485,1419535..>1419732) /gene="Cre-pab-1" /locus_tag="CRE_29623" /product="CRE-PAB-1 protein" /db_xref="WormBase:WBGene00059858" CDS join(1417577..1418107,1418127..1419485,1419535..1419732) /gene="Cre-pab-1" /locus_tag="CRE_29623" /note="contains similarity to Pfam domains PF00658 (Poly-adenylate binding protein, unique domain), PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)) (4)contains similarity to Interpro domains IPR002004 (Polyadenylate-binding protein/Hyperplastic disc protein), IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1), IPR006515 (Polyadenylate binding protein, human types 1, 2, 3, 4); coded for by the following C. remanei cDNAs: DR782474, DR778650, DY525213, DY526688, DR406331, DR778589, DT935726" /codon_start=1 /product="CRE-PAB-1 protein" /protein_id="EFP12493.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR002004" /db_xref="InterPro:IPR006515" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="PFAM:PF00658" /db_xref="WormBase:CRE29623" /db_xref="WormBase:WBGene00059858" /translation="MEMNVATPAAPVAGAGAPQPGQNPTGSSYTMASLYVGDLHPDVN ESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADGKSFFQFMSFLTFLITA ERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG NILSCKVTFPIEHLKTVVAIDDEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVF VGKFQPRAQRNRELGETAKKFTNVYVKNFGDHYNKETLEKLFAKYGAITSCDVMTSDG KSKGFGFVAFAQPEEAEAAVQALNDSAVDGSDLKLHVCRAQKKSERHAELKKKHEQHK VERMQKYQGVNLYVKNLDESVDDEALKKQFENFGNITSAKVGLVPLEFFISLFQVMTD ENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQLASQYMQR LASMRMHSNVPGGGMYNPAQTGPGYYVANPMQQQRNFAGGPQIARPGGGRWGQQNQYP MQNQYMMAQGPGVYPNRMGRPQNQQGGPRGPPQQYSQVAQGGVRMQGPPRAQNAGVQQ QNIQRPPPQQQQQQQQQQQRPAPSGPKAPPQPYSQQYQQQRPQGIVIGGQEPLTSAML AAAAPQEQKQLLGERIYALIEKLYPGHKDAGKITGMMLEIDNSELIMMLQDSDLFRSK VDEAASVLASAQK" gene complement(<1420473..>1422437) /locus_tag="CRE_29847" /db_xref="WormBase:WBGene00059857" mRNA complement(join(<1420473..1420633,1420681..1421052, 1421100..1421397,1421536..1422093,1422381..>1422437)) /locus_tag="CRE_29847" /product="hypothetical protein" /db_xref="WormBase:CRE29847" /db_xref="WormBase:WBGene00059857" CDS complement(join(1420473..1420633,1420681..1421052, 1421100..1421397,1421536..1422093,1422381..1422437)) /locus_tag="CRE_29847" /note="contains similarity to Interpro domain IPR000886 (Endoplasmic reticulum, targeting sequence)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12502.1" /db_xref="InterPro:IPR000886" /db_xref="WormBase:CRE29847" /db_xref="WormBase:WBGene00059857" /translation="MKIVLSILATSVLFVKAGFHEECQQTLREGRLRVETIAEKLASR EIDRLVSLMSKSKDQIKSYKDESLNLSPKLQDLIKIRDGQPPCPQPNATMFTTSTTTT TPKPTTTAPATTAADTTTNGNTDGATSGAPAGSTSSAPAGSTSSAPAGSTSSAPTSSA APEVVEEKKKGKDEGKKSEKFNPSKVYVTRTNDMDPFSWYMKTLHYYMKRESEVCNNQ ITDLNSVTEDQLFGYFSTLAAAHPGPFCSLCHRFTEEIHSKVLKPNSLLIADDEYHIS HLLYNHFPSPKSICTAIAPGCDEDYALKVGNLTESVVCLECTACMSITNVLQHKIFLQ PAMLDQVYNWLRGNLFHNICAELCLAFQGLDIPLFPHGLTYDGCQNVMKKKFYQLIDV ATVITRPERFCSLEIQWCELNEQPNALHCLRELCQEYFKDTPQTRWLCSQIPDRPEQA DAFLNIHQTKVRKEKKDYHVKFQQRNLHDEL" gene <1422957..>1426776 /locus_tag="CRE_29624" /db_xref="WormBase:WBGene00059856" mRNA join(<1422957..1423041,1423482..1424141,1424175..1424283, 1424331..1424422,1424470..1424621,1424703..1424996, 1425040..1425190,1425240..1425416,1425531..1425675, 1425719..1425907,1425953..1426022,1426072..>1426776) /locus_tag="CRE_29624" /product="hypothetical protein" /db_xref="WormBase:CRE29624" /db_xref="WormBase:WBGene00059856" CDS join(1422957..1423041,1423482..1424141,1424175..1424283, 1424331..1424422,1424470..1424621,1424703..1424996, 1425040..1425190,1425240..1425416,1425531..1425675, 1425719..1425907,1425953..1426022,1426072..1426776) /locus_tag="CRE_29624" /note="contains similarity to Pfam domain PF07974 EGF-like domain; contains similarity to Interpro domains IPR000742 (EGF-like, type 3), IPR016186 (C-type lectin-like), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12382.1" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013111" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF07974" /db_xref="WormBase:CRE29624" /db_xref="WormBase:WBGene00059856" /translation="MIHDELSISEASTSVGTTTTTSLDLFDLPVNCTINGISQKVTTN CESLESILCECSLLPSKYTAYSTASYPIIDYSNATDIIFLYNDYWDDEIDNLSTTVTA PWTEHAEAADSITTTVNPSCLVQCPDGYIIGQSLCYFIVDLSNIKSYQSALSYCQTVN LRNLISLEHLRNLLDLQILKTKVNSSYSTTWYFANGGGSVQERFDKKAQVFDINMLTG MTSPIEMTVGISDATSNVSAICVLPRGFLREYCNISQCYVDSALDVLELNTILSSSKE VIDSVSTTSITCSYTKSVSTVACGSRGNMMPNPTTISCEASGDAQKLPNTTAEIVEYC SLCFERGTESCSEATDKNGKTGYQCNCKSSYSMGTCWYTSDSCLPETCNGHGKCSDTL GNVKCDCDWGYEGDSCEVNKDRVTNTTDSFFTRLGNYIIDFPTIYAVQTNSWIFLTIA AKSIGKIYRSTGEDDPQETHQAARAFFMTLGTTCVLFFNDPYLFKISLATCRMFFLII HFCFMGAMIQWMLEGYNANQVVRCVHLNEWEKDFEYRKAWGIKAAPRMVIPLIMMAVA LAVIFKSNWYYLPSTWTCLGVICNQTTSVWLSAIWIVLCLVVSTAAFAESSVLLTHRR PLYNLKIRQRIERDIGIIDGWVAEKCRRNTVLCFIGICLLSVTWLFTILASDKRSKYV FGWTLTLVSTLYGSFSFVQGVYTDPNTWSAILWFAMKRFPARFAPTYDPISMWTREEV KEIQKLPKEQREIMKDEMFPLNKRLFLHHKWDMNLNEKLEKETEITEALLEILRNEIR THHDLSGTQFQKEQLQETFAEFVKSVADRPPRMDLLGVNAKSEAVTLCAEKEDGSARV TKFMLVPDIDVFEPEEFYEDADDVDKKRMDIEEEKVDVTFLFYPSFLFQETYKIAREE AVSQNKFMNSAIKFKFVITFCSLFQINF" gene complement(<1427352..>1431660) /gene="Cre-blmp-1" /locus_tag="CRE_29848" /db_xref="WormBase:WBGene00059855" mRNA complement(join(<1427352..1427696,1427789..1427839, 1428460..1428931,1428982..1429076,1429191..1429531, 1429819..1430701,1431148..1431242,1431492..>1431660)) /gene="Cre-blmp-1" /locus_tag="CRE_29848" /product="CRE-BLMP-1 protein" /db_xref="WormBase:WBGene00059855" CDS complement(join(1427352..1427696,1427789..1427839, 1428460..1428931,1428982..1429076,1429191..1429531, 1429819..1430701,1431148..1431242,1431492..1431660)) /gene="Cre-blmp-1" /locus_tag="CRE_29848" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domains IPR001214 (SET), IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR007087 (Zinc finger, C2H2-type); coded for by the following C. remanei cDNAs: DT936325" /codon_start=1 /product="CRE-BLMP-1 protein" /protein_id="EFP12402.1" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE29848" /db_xref="WormBase:WBGene00059855" /translation="MGQGCGDDGVPPAPFSSAHSPAHSPLSVGVSSASSATSSSSTPP PSTSPTASGAAPGVQATETDWKRFSDERLAELCIFHVPDKVISLPNPKRSECTLPMNV ILKPSSKNRKKSSIWSSDQIPRGVRFGPLVGEIRLVDVESALVCPAEASMAGGTTAQE EIPFDDCPEEWKIFSPSGGRLTKKISVKDDGRSNWMKNVVAAEDENNQNIVAAQVGND IYFYAVKPIDSSTELSFWFSRDYARKLNYSTTPQVRTRLPLQASTPLIPSIPSIPSAP PVSSSTAIASLAETVVAIDYSVKKLVEPVDTLSTDASSISDNDEEMIDVEESCTRPSA PEVSRPNVIQNPVVRPVPTRITNFASPLSTLDPLAIYKDYLRKTIQLKKLTETGMFAS PVVQTAATITATGGRSGQPIDVQPVLAATAGAHFGNYAAIYGSQDFQHELKPLFTTAT PTFGGGGMGGGFGMGGSGHASSFHQLPFVNHSASSHNDSSFNGVPNYVQQQENGKTRY ACKDCNKTFGQLSNLKVHVRTHTGERPFKCEICTKEFTQLAHLQKHHLVHTGERPHRC DICDKRFSSTSNLKTHLRLHNGQKPYTCDVCDAKFTQYVHLRLHKRLHANERPFSCST CGKKYISPSGLRTHWKTTTCKEEDTKEMQMWKAGKDDLMDIKGEIDDGNGNSYMDIFE NPLNSDLKPRPLLPIETIYSKYNISNPSLLGQGPSGMQEQQAPPPTPQQQHMMYGNSM GHMGQPQHLQGPPPPQHFRMDHNGMQNGGHPHPHQLIQTQQGPQSQQHPHDSIHQPLR LPDLKSSLLPTLGLPHYQ" gene complement(<1438783..>1440505) /gene="Cre-tag-353" /locus_tag="CRE_29849" /db_xref="WormBase:WBGene00059854" mRNA complement(join(<1438783..1438950,1439046..1439604, 1439995..1440114,1440205..1440284,1440335..>1440505)) /gene="Cre-tag-353" /locus_tag="CRE_29849" /product="CRE-TAG-353 protein" /db_xref="WormBase:WBGene00059854" CDS complement(join(1438783..1438950,1439046..1439604, 1439995..1440114,1440205..1440284,1440335..1440505)) /gene="Cre-tag-353" /locus_tag="CRE_29849" /note="contains similarity to Interpro domain IPR000626 (Ubiquitin); coded for by the following C. remanei cDNAs: DY525435, DR782102, DR777975, DT935180, DR777627" /codon_start=1 /product="CRE-TAG-353 protein" /protein_id="EFP12698.1" /db_xref="InterPro:IPR000626" /db_xref="WormBase:CRE29849" /db_xref="WormBase:WBGene00059854" /translation="MTDDMDVVAETVTPSEDIELTIRQAYHTESDLKFTCPTNWTIKQ VKEHVKNTLTSHPDVPNQRLIYSGASLNNDQILSDVLRERNHIAGDQVFFHLMISQPY QQATPDSDVRRRNVNGSGTNSNATTASNLNSANYPAYAQNMIAWQQYWTAYNQLSPEQ QTSEQIRLMTHYYTYAMANPAISMNQTPANSQDQNAAAWRARVQGGNPGAAVQANGNQ AAAAPRQGRVDILEVGYRIFKLVLLFSAVLLYSSFERFALVLCSALFIYFIQLRRNHA RNRAQAQAAAAQPANNQEAHVNNNNNGENEGENADPATDGETPAAPEAPTGPPVVQPT GMQVFIATCYSFVTSFFASLVPDHPMPMDLN" gene <1441107..>1442683 /gene="Cre-cup-2" /locus_tag="CRE_29625" /db_xref="WormBase:WBGene00059853" mRNA join(<1441107..1441490,1441535..1441711,1442270..>1442683) /gene="Cre-cup-2" /locus_tag="CRE_29625" /product="CRE-CUP-2 protein" /db_xref="WormBase:WBGene00059853" CDS join(1441107..1441490,1441535..1441711,1442270..1442683) /gene="Cre-cup-2" /locus_tag="CRE_29625" /note="contains similarity to Pfam domain PF04511 Der1-like family; contains similarity to Interpro domain IPR007599 (Der1-like); coded for by the following C. remanei cDNAs: DY527233, DY528155" /codon_start=1 /product="CRE-CUP-2 protein" /protein_id="EFP12410.1" /db_xref="InterPro:IPR007599" /db_xref="PFAM:PF04511" /db_xref="WormBase:CRE29625" /db_xref="WormBase:WBGene00059853" /translation="MNQFIGLLKVLKSPTIQSFCKIAYVPIRFITIAKKSIALPLYTC SSLHDVSFSTILLTVFLFVTELFPYSKISNIFLQMDLESFLLGIPVVTRYWFLASTIV PLLGRFGFIQMQWMYLEWDLVVSKFHIWRPLTSAIYYPITPQTGFHWLMMCYFLYNYS KALERETYRGRSADYLFMLIFNWFFCVGICMAMGIYFLLEPMVMSVLYVWCQVNKDTI VSFWFGMRFPARYLPWVLWGFNAVLRGGGTNELVGIIVGHAYFFVALKYPDEYGVDLI STPEFLHRLIPDEDGGIHGQDGDIRGPRQQPRGGHHWPGGAGARLGGN" gene <1448452..>1454469 /gene="Cre-mgl-2" /locus_tag="CRE_29626" /db_xref="WormBase:WBGene00059852" mRNA join(<1448452..1448565,1448612..1448766,1448816..1448993, 1449039..1449210,1449835..1450282,1450328..1450498, 1450547..1450681,1450767..1450953,1451062..1451574, 1451752..1452008,1452056..1452358,1452422..1452525, 1452573..1452676,1452718..1452939,1453572..1454012, 1454066..1454206,1454251..>1454469) /gene="Cre-mgl-2" /locus_tag="CRE_29626" /product="CRE-MGL-2 protein" /db_xref="WormBase:WBGene00059852" CDS join(1448452..1448565,1448612..1448766,1448816..1448993, 1449039..1449210,1449835..1450282,1450328..1450498, 1450547..1450681,1450767..1450953,1451062..1451574, 1451752..1452008,1452056..1452358,1452422..1452525, 1452573..1452676,1452718..1452939,1453572..1454012, 1454066..1454206,1454251..1454469) /gene="Cre-mgl-2" /locus_tag="CRE_29626" /note="contains similarity to Pfam domains PF03131 (bZIP Maf transcription factor), PF07562 (Nine Cysteines Domain of family 3 GPCR), PF01094 (Receptor family ligand binding region), PF00003 (7 transmembrane receptor (metabotropic glutamate family)); contains similarity to Interpro domains IPR011500 (GPCR, family 3, nine cysteines region), IPR000337 (GPCR, family 3), IPR001828 (Extracellular ligand-binding receptor), IPR004826 (Maf transcription factor), IPR000162 (GPCR, family 3, metabotropic glutamate receptor)" /codon_start=1 /product="CRE-MGL-2 protein" /protein_id="EFP12707.1" /db_xref="InterPro:IPR000162" /db_xref="InterPro:IPR000337" /db_xref="InterPro:IPR001828" /db_xref="InterPro:IPR004826" /db_xref="InterPro:IPR011500" /db_xref="PFAM:PF00003" /db_xref="PFAM:PF01094" /db_xref="PFAM:PF03131" /db_xref="PFAM:PF07562" /db_xref="WormBase:CRE29626" /db_xref="WormBase:WBGene00059852" /translation="MLYSHVTLLMLRVVDVVAKTTVQQSARMLVAEIHGEIQIGALFP IHRQIAGSESCGEIWEQYGIQRSEIAMLTVKQLNEELPFKLGLSIRDSCWTERIAMEQ TIAFLREGVAQCSCCQTPGCNRKSVPVVAVIGPGKSSSTIAVQNLLQVFRIPQVGYSA TTPDLSDKEQFGYFLRVVPSDVFQAQAINRLLHHYNWTYVAVLYSAGNYGEKGFESLE RLIAHRSSSVCIAYSEKIKTLASDQEYRQVLTRLDSQNSRPQVVVCFCEGASMRQFFK AQKHLADGKGQMKRFQWIGSDGWADRNDVVEDLEQEAEGSFSIRIHAPKIPGFRQYYT ALHPENNTMNPWFREFWQQKFNCQFAVSKEDKNNENIRICSGDENLDEQYKEDPKLSQ VINSIRVVALGLKAMYQDRCRDNSTLCTEMLSRNGTLLYEYLLNVTYSDQFKQPVYFD RNGDPPAWYDILNYIGTKDLDNPYNEVGSFKSINDYGVEELDMTASSMFYDKTEILPE SVCSRPCGVGQRQRETMACCWICESCLDFQFVNKTTNQCMNCSLGSWPNMNRTGCEDI IPEVVSWTSFGHILALVLAVTGIITSLATLAVFLRHNSTPVVKSTTRELSYIILSGLV ACYAVSFALLATPSTSSCFITRVIPPIAFAVVYSALLTKTNRIARILAGSKKRILTKK PRFLTTFSQVVITWILVAVQCVIVGVGLMRDWPDATYAKYALPRKLILECDTETKSFL IPFFWDFFLITLCTLYAFKTRNLPENFNEAKFIGFTMYCTVVVWIAFLVLHMGTTHKA LVMSFSYSLSASVALALLFFPKLYIILMHPEKNIRASYTTTKLIRCHFGNSQAAYDST SKQQHLGSKTTARTSVQSGSASKSSSMGGGVTRTASVHVPVSRGSTHSTDVSTQTEAA SKFSRSFSIVGRKKQQGLDDDVQQLVDACRRYQDEKINSSAANLLLEEAEDEVGALLA DSIENSMRTVLSTVAGKAVVPMVPMVPMVPVIPVVTVPTAPPQEDNFEQNGIHLNTTP KLTQSYSIFDFACFRRFLSSPLCLHLVLPATTFPPTNRRLSESLQGSRLHPFFPLPEP KSVRKIANVSVIAKSWCSTARFVSSDSIMNNNQQMLSPMSSVGSVSSSRASGSPSPHS FDHLSDEELAHISVRQLNQKLMGQDRNVVMQWKQKRRTLKNRGYALNCRARRVQNQMQ LETDNMMLRNQIKLLKDTLTEVQMRLQYYEPIFYQSYQPVLHNTTSSTTTTSSESVPA ATHQVPADPTVSSPITIAPEYKNIF" gene complement(<1455311..>1455619) /locus_tag="CRE_29850" /db_xref="WormBase:WBGene00059851" mRNA complement(join(<1455311..1455464,1455516..>1455619)) /locus_tag="CRE_29850" /product="hypothetical protein" /db_xref="WormBase:CRE29850" /db_xref="WormBase:WBGene00059851" CDS complement(join(1455311..1455464,1455516..1455619)) /locus_tag="CRE_29850" /note="contains similarity to Pfam domain PF06747 CHCH domain; contains similarity to Interpro domain IPR010625 (CHCH)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12585.1" /db_xref="InterPro:IPR010625" /db_xref="PFAM:PF06747" /db_xref="WormBase:CRE29850" /db_xref="WormBase:WBGene00059851" /translation="MSQTGPFIRVTTVSAPLKGSFPLDHEGTCKLEMLNYMVCLHEKK QQNSECRHVAKDYFECRMNHGLMDKEEWQKLGYGDSKEISK" gene complement(<1456985..>1459926) /locus_tag="CRE_29851" /db_xref="WormBase:WBGene00059850" mRNA complement(join(<1456985..1457200,1457254..1457773, 1457868..1458147,1458195..1458345,1458434..1458493, 1458541..1458791,1458901..1459318,1459368..1459462, 1459581..1459680,1459731..1459790,1459840..>1459926)) /locus_tag="CRE_29851" /product="hypothetical protein" /db_xref="WormBase:CRE29851" /db_xref="WormBase:WBGene00059850" CDS complement(join(1456985..1457200,1457254..1457773, 1457868..1458147,1458195..1458345,1458434..1458493, 1458541..1458791,1458901..1459318,1459368..1459462, 1459581..1459680,1459731..1459790,1459840..1459926)) /locus_tag="CRE_29851" /note="coded for by the following C. remanei cDNAs: DY526072" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12453.1" /db_xref="WormBase:CRE29851" /db_xref="WormBase:WBGene00059850" /translation="MPTMVMANPPKTGNNSLRKRQKNKNDNIVAISYMYVGTPKKKFT FYVRERLVYRSNVEVTYEDVYNFLAHTSNDDTISLHYSVNGLYVPITTTGQLHTFIRH VHNDSTAFLYVENQDYVWNVTPQDNTHKMEKRVPAGGAPPGDGTSDPYDSMEDEDESQ NEVGDEEMTEEDNSQDEEEYEEEGERDDKQQPMPIFTDDSAPAVFAEKVPVKEAFLEP KPRVVVKPKSQTTTEKPANKSNNRASSNSERTVAPAVPFPSKKWTVQEAYFQVKTMLT DALTNKTMGSVPEQVSEQLVVNVWNPAFPPNTQVLKDTVSLLKNSIGTGILYYYHKVM SKMSPEISNGDKADSMELLTEFMPTHDPEYLAEFVESALIAACDILESVQHLAHLQKE FDYFNQANEKLVKNNEQAEKMQLPNLQEIHEHLKTALVSAHFGFNLLNPVFPAGCECK EAIRLVTLELQKLAAVMKNVHQKSSSPQQIQETEIFLIENAHEIVKRFTDKECPQHRT IELALRSSEIYKWRKDLCIGYDKWVGLRDAGESRLKIPLNCYDVVVPLPAPFSIKPEG TVGDPNLVPIAHGLTDMHSNATPLNMPSDSAKPPAQNQADLEETLDTMRSMTINEKPK PISVNNETVVAKLTAAPTTTSAAATNTGEAAEDTGEKKMSDQLQAMVDKMYKSVPNQH NFVYPPPPKPGAILIPTGGLAHCRCSKNCPEFLMEPAYEYIERFNEPRQTVWEKTKQK RFKKN" gene <1461021..>1461361 /gene="Cre-ned-8" /locus_tag="CRE_29627" /db_xref="WormBase:WBGene00059849" mRNA join(<1461021..1461107,1461215..>1461361) /gene="Cre-ned-8" /locus_tag="CRE_29627" /product="CRE-NED-8 protein" /db_xref="WormBase:WBGene00059849" CDS join(1461021..1461107,1461215..1461361) /gene="Cre-ned-8" /locus_tag="CRE_29627" /note="contains similarity to Pfam domain PF00240 Ubiquitin family; contains similarity to Interpro domain IPR000626 (Ubiquitin); coded for by the following C. remanei cDNAs: DR780917" /codon_start=1 /product="CRE-NED-8 protein" /protein_id="EFP12454.1" /db_xref="InterPro:IPR000626" /db_xref="PFAM:PF00240" /db_xref="WormBase:CRE29627" /db_xref="WormBase:WBGene00059849" /translation="MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLI FAGKQMNDDKTAADYKVLGGSVLHLVLALRGGF" gene <1461951..>1465363 /locus_tag="CRE_29628" /db_xref="WormBase:WBGene00086105" mRNA join(<1461951..1461983,1462360..1462504,1462550..1462662, 1462707..1464553,1464607..1464744,1464795..1464908, 1464953..1465181,1465229..>1465363) /locus_tag="CRE_29628" /product="hypothetical protein" /db_xref="WormBase:CRE29628" /db_xref="WormBase:WBGene00086105" CDS join(1461951..1461983,1462360..1462504,1462550..1462662, 1462707..1464553,1464607..1464744,1464795..1464908, 1464953..1465181,1465229..1465363) /locus_tag="CRE_29628" /note="contains similarity to Trichomonas vaginalis G3 DNA-directed RNA polymerase, omega subunit family protein.; TR:A2EVM7; coded for by the following C. remanei cDNAs: DT935896, DY527621, DR408165" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12369.1" /db_xref="WormBase:CRE29628" /db_xref="WormBase:WBGene00086105" /translation="MARVKQAKVSEPDSLSLVNETEDSDAKIVRAIDVFDGSQRDLYA SLPEELRDLVNRAQRADLKKIEYIVRELKENSEALGEAMKVLRKLQDKASKKKAEKLV QIPLNNSQLSEEMVEPKGVINDEASDQTPLQEEEEKEIGSHCSEVETCSTETDVELVT PSIAQAETTENHSTELSDSRNLESQLLPREDEKKRLLELENEVEEATKGISRFLGLKT DFTNLSEAVQSMQASFQLEHGKHVFSLTALEAKNKENEKLALEKNRLEETVKKVGEEK KKESEELQKTKTLLKKTRKEKDNAVKKLKRIADKDKPEDINVSERLSDISANESGVNT SNYSVESSGGDTTTTVDKKSERRIAELQRSTESLRKRYEEVCQKLETSEKSLEIQQEL NAQTTSLSAEQSQKQSNEISDLKETVEMLKTTTVQQQEELIRIKQLERTKTDVLVSLL EDEKQSIRDECDSLKHELERSQKALLEQKSEAKKHLENELWKLKKAAKSAEKRKSETP VSPKLKDTSPMVQHCDVQKVIADLTMLQEKVKDASSDEAISKIGNVLQSAMASVEAIA NKANRLEAEHKLKDQVNEELRKTNEENLKKYENSLSEERRKCAEEVAGFKMQLEELDS WMEKLREQEKEKEAMRMEYQTASEDLATRILSYEREKAKFQEELYDLKKDIDQKTADF RKVNEEKLQLQRETEQITKQLEESLSPKKDKAAQLESRLEVIQVAAKAQQKRLDEDLK SARIELQEAIAKCDELQQQNEVLQEKLTSTEKLTLSLTEKLSEVKETEDTVVELQKTI SQLKEENSYLQSESAQDRSGLVTALVATQNKLTKCQKAFSVPSLGEQLTDLDESQNNV DEAQSSRQTNNQTQAVIEQAYPDIDSLLRQLVHHLAQNQNYMYGVFGIVIYIILIHLY ILL" gene complement(<1465741..>1468685) /gene="Cre-sptf-1" /locus_tag="CRE_29852" /db_xref="WormBase:WBGene00059848" mRNA complement(join(<1465741..1465767,1465860..1465987, 1467239..1467368,1467618..1467828,1468424..1468590, 1468641..>1468685)) /gene="Cre-sptf-1" /locus_tag="CRE_29852" /product="CRE-SPTF-1 protein" /db_xref="WormBase:WBGene00059848" CDS complement(join(1465741..1465767,1465860..1465987, 1467239..1467368,1467618..1467828,1468424..1468590, 1468641..1468685)) /gene="Cre-sptf-1" /locus_tag="CRE_29852" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type; contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="CRE-SPTF-1 protein" /protein_id="EFP12422.1" /db_xref="InterPro:IPR007087" /db_xref="PFAM:PF00096" /db_xref="WormBase:CRE29852" /db_xref="WormBase:WBGene00059848" /translation="MLNPSDAASAALSFSVPFQMSENPLSKLVEHCNKFVPGGENKMK LDPSKSDALLLPTDMNAYSPYLTNPNWWVEQANWSHLYPTVTSASSVDAYHNYLASTQ LGGLLSSSVSAVAAQLPSSVSAQSALSSSIAAQQRSISKSLQQAKSSASSSGSANSNG GGKYQASRAANKCECPNCQEAEKFGPTAVAARKRGVHNCHIAGCGKVYNKSSHLKAHL RWHSGERQTKRRSGDST" gene complement(<1472513..>1474406) /locus_tag="CRE_29853" /db_xref="WormBase:WBGene00059847" mRNA complement(join(<1472513..1472804,1472852..1473015, 1473061..1473286,1473335..1473562,1473610..1474085, 1474129..1474340,1474388..>1474406)) /locus_tag="CRE_29853" /product="hypothetical protein" /db_xref="WormBase:CRE29853" /db_xref="WormBase:WBGene00059847" CDS complement(join(1472513..1472804,1472852..1473015, 1473061..1473286,1473335..1473562,1473610..1474085, 1474129..1474340,1474388..1474406)) /locus_tag="CRE_29853" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12418.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR016130" /db_xref="PFAM:PF00102" /db_xref="WormBase:CRE29853" /db_xref="WormBase:WBGene00059847" /translation="MPPKVKKSPATGRKKNSKASRRPSQTNLISVENGGVPRGRGRNT ERSVMQTLEQEETTSNDAGGNQKRSVAQPPQPMPVPPQPTKAKEMATRTMMLPPPMPA QQPTPPAPIPAQIPPPPAQGSQMPMMAPPVTVMPAAPRPIQPNQPPVVNSQIPQMQPP QPAAPMPPTPRPPPGVVNQSLASPSPTPVLKATMPLQNGVVQQQPTPPAVPEPIRRPS RERVDQSVDCGVETSEKKKRAEVINSWILAVLQGGVEGLKKEYHASMNDGPMEKAVDF LDNPTKNRYHNIPCCDATRVKIADDPHFYIHANLVSSGPNPRRFICTQAPLNGTIEDF WKMVIVSGLEYIVMLCELVEKGKPKSAEYFPVKIGEVMKIGKLWTITKENSVDIDKNL AMSTMRITKQGDTAVARTVKHIHWHNWPDHGVPDNFLSPFRLLSIFKNCQKPVVVHCS AGVGRTGTLALILIILEALCLPDFLGVPRLLTKLRDERFKSVQTEMQYLYVHRCILEY LVWKKYTYSKEDYAKFVKDYEQALAGCVEK" gene <1474752..>1475755 /gene="Cre-sss-1" /locus_tag="CRE_29629" /db_xref="WormBase:WBGene00059846" mRNA join(<1474752..1474907,1474955..>1475755) /gene="Cre-sss-1" /locus_tag="CRE_29629" /product="CRE-SSS-1 protein" /db_xref="WormBase:WBGene00059846" CDS join(1474752..1474907,1474955..1475755) /gene="Cre-sss-1" /locus_tag="CRE_29629" /codon_start=1 /product="CRE-SSS-1 protein" /protein_id="EFP12729.1" /db_xref="WormBase:CRE29629" /db_xref="WormBase:WBGene00059846" /translation="MVKKITIYTAFGHFLQMVERQAEEEKEQMKELETDRCPIDHPLS DYQNALQSTQDLQVRSCPVDQWVQIDEVMKKSASCPSLPFNFSHQIDPIQMTISPVPT SIESKKLNEATELMMSFWKVHVTSRKPKSEREEQISSIFEKLEGLFAVSSTTSVASMF GKFEEYIEEMKREKLPKKEKSLIWNSPDQPTIPQLPVFVKSPVDSLKFYKGTHTQTAE MADDGKYPIAKCNLLLFCFTELSELTYYASANTSTVSSPATSHSSGSSSSSGSTTTII ARPNRLQTEIRLQQAVIEEQKKIIDGLYNLQTLSRRLKNVRK" gene complement(<1475988..>1480182) /locus_tag="CRE_29854" /db_xref="WormBase:WBGene00059845" mRNA complement(join(<1475988..1476128,1476178..1476227, 1476403..1476478,1476700..1477289,1477604..1477711, 1477757..1477846,1477895..1477979,1478022..1478160, 1478206..1478393,1478444..1478566,1478614..1478856, 1478904..1479131,1479179..1479263,1480076..>1480182)) /locus_tag="CRE_29854" /product="hypothetical protein" /db_xref="WormBase:CRE29854" /db_xref="WormBase:WBGene00059845" CDS complement(join(1475988..1476128,1476178..1476227, 1476403..1476478,1476700..1477289,1477604..1477711, 1477757..1477846,1477895..1477979,1478022..1478160, 1478206..1478393,1478444..1478566,1478614..1478856, 1478904..1479131,1479179..1479263,1480076..1480182)) /locus_tag="CRE_29854" /note="contains similarity to Pfam domains PF00246 (Zinc carboxypeptidase), PF01549 (ShK domain-like), PF02244 (Carboxypeptidase activation peptide); contains similarity to Interpro domains IPR003146 (Proteinase inhibitor, carboxypeptidase propeptide), IPR000834 (Peptidase M14, carboxypeptidase A), IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12717.1" /db_xref="InterPro:IPR000834" /db_xref="InterPro:IPR003146" /db_xref="InterPro:IPR003582" /db_xref="PFAM:PF00246" /db_xref="PFAM:PF01549" /db_xref="PFAM:PF02244" /db_xref="WormBase:CRE29854" /db_xref="WormBase:WBGene00059845" /translation="MDTFLSNFSLKVCQKSIDTKANDKMKENGENEGLRKKFQVLRAH AADVPQLAALRDIQKKTENDLDFWQTPSKVGHRADIMVDTDRMEWLNSVLKSSNISYD VIIDDVEKLILEKEHGPSRFSKLLFSKRMHNEGGNRARYGFGEYHSYQTICDWMKDIE RKYPDKARVFTMGTTAEGRPIQGIKIGNQVWRNDKRIFWIDGGIHAREWAAVHTTLWF IDRLIADYNDDSLVRNAVDRLNFYILPVANPDGYEYSRSDVSPMIRLWRKNRAGVVCK KDRWFRDRCCGGVDLNRNYDWHFGETGSSTDKCSEIYQGSSAFSELETRSMRDFLTSP ELNGKIDAFITLHTYSQMWIHPYSHARKSVPADVAELQRVGKAAVAALENTFGTQYKF GTGSDILYPSAGGSDDWAKGVLRVKYVYLLELRPGEDVWDGFILDQHQLIPTAKETWN GIKVVIRAVSDQAGSLPDSIASTLPPITLPLPPPTTTTTTTTTTTTTEAPTTTTTAPW TTTPWTTTPWTTTPWTTTPWTTTPWTTTVPFSSIFIVTEPAPITRTTPTHLDAFYKLG KRRFKFVSIKTFLPTLPTTPMPSFDLFSTTLSPSFPAFSQHHQASSFSFSQPPSLPLV TVFGPNENNAVIDDFEGVSSPRVLPAFVRRPNGSIVRVNSRRPGSRQRRPGSFSQQRV VQFRNRSSNRGQFTNVAQQRQMPIQQQSRGQCADRSAWCASWLSGNSRVCQISAIYMR QDCARTCGFC" gene <1485274..>1487298 /locus_tag="CRE_29630" /db_xref="WormBase:WBGene00059844" mRNA join(<1485274..1485459,1485539..1485658,1485708..1486300, 1486345..1486564,1486612..1486955,1487006..1487129, 1487179..>1487298) /locus_tag="CRE_29630" /product="hypothetical protein" /db_xref="WormBase:CRE29630" /db_xref="WormBase:WBGene00059844" CDS join(1485274..1485459,1485539..1485658,1485708..1486300, 1486345..1486564,1486612..1486955,1487006..1487129, 1487179..1487298) /locus_tag="CRE_29630" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00017 (SH2 domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12659.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="PFAM:PF00017" /db_xref="PFAM:PF07714" /db_xref="WormBase:CRE29630" /db_xref="WormBase:WBGene00059844" /translation="MIQTRTHEQTLSKEPWYHGLLPREDMKVLLTQRGDFLVRFTDPK IGESRKFVLSVYVGIADDIRHYVIREMENKFAVDVKWFATIPDLLNYHHRTKEPVASG CAESVLIRPIGREPWEKQHSDVTLLKKLGEGAFGEVQLGEIRIGNTVKKAAIKLAKLE SLTKEQIKEIMHEARLMRKFKHPNVVTFYGVAAGQEPLMVIMELVNSFTFHSDLFRFI IFQAENGALDSYLKKNTGSLSMSKKNDMVFQAALGLEYLHSLQIIHRDIASRNCLYGG GQVKISDFGMSREGTSYRLNPYKKVPIRWLAPEVPRTGFYTPKTDVFAYGIMCWEVYH DGTEPYPGMKVAEVLPRVQEGYRMPFEAGVAPAVVKYITERICSATEFDRVTMSEIVR ELPNIDGFEQAPGSNSYFELPNKIKKEDLTPSKQSPLVNILPRVSQPVSAPFAATNQV VNVLQAPPTYLDRAPDKPEKTMQQKKSVSITTTTEEGNKKSKTPIRTRITNFQNFRGT PSNNKSQSVSIAANTQANAKAKKKNKQSSSSSVDAPTSSGFSVLSIFQKKKPSGDKSE GL" gene complement(<1487991..>1490339) /locus_tag="CRE_29855" /db_xref="WormBase:WBGene00059843" mRNA complement(join(<1487991..1488275,1488320..1489168, 1489213..1489407,1489566..1489811,1489858..1490057, 1490105..>1490339)) /locus_tag="CRE_29855" /product="hypothetical protein" /db_xref="WormBase:CRE29855" /db_xref="WormBase:WBGene00059843" CDS complement(join(1487991..1488275,1488320..1489168, 1489213..1489407,1489566..1489811,1489858..1490057, 1490105..1490339)) /locus_tag="CRE_29855" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12634.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CRE29855" /db_xref="WormBase:WBGene00059843" /translation="MEVHVDMSIEEIRSEKYTLMTCSQNIVLVTRIQSTTSMETLLNY LQKYGEVIYIVFNANKANLSEERYAYVKYLTRESAQQLIDDIENMTSVNGGVPAQAMM SRIDASTRYVDAANIYATNLPDDMTEAEAIPMFSSFGKLREVQQLGTGFFMIQFSNES EAIKAVLELNGQEMAGKTVEVSHYGRGRNPRTPNPGKITFRLYNLRPEVDNQELHEMF RFLGDITARVERNVYGTTRCMGYVMFERPQSDTPFFNSFADEMNSDGYMLYQKAGFCY TECRFKARPYFDGHYSKFYPSAMPPLLNRYYQLPYNYRLLFGDPLYHKNASENKDATK FLRAYNVHVSNIGNLTDMQLAQYFANYGEIIFVIVLKDISPYGIVSFTNLPQAHTAVE DITRRRADGLTVFYAEIMDCYQLPHFDEHELFMTRIRKSRAVDPNCSIENTFTYQGTI DRYYPEQLRVEGEISIEEVSKRMQARVAELTEELNRGFASFEEDTQKDSGATAVVETP IASCAMSSASSTSARRGSSSTTQESEIFQTSQVAEVPPARNPPHYNVPSAFKCTQPPS VVEERRNRPQEKHRPHIIKLLEKYFYKKTDEERLDMLNAAYNIPMTDLPRLLKDVNAF RRFFVERGIELAQQAAEVQERQDVKQAEQTKKHANSQQKPKKRKR" gene complement(<1490955..>1492509) /locus_tag="CRE_29856" /db_xref="WormBase:WBGene00059842" mRNA complement(join(<1490955..1491080,1491126..1491309, 1491361..1491616,1491668..1491984,1492032..1492093, 1492137..1492201,1492248..>1492509)) /locus_tag="CRE_29856" /product="hypothetical protein" /db_xref="WormBase:CRE29856" /db_xref="WormBase:WBGene00059842" CDS complement(join(1490955..1491080,1491126..1491309, 1491361..1491616,1491668..1491984,1492032..1492093, 1492137..1492201,1492248..1492509)) /locus_tag="CRE_29856" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12319.1" /db_xref="WormBase:CRE29856" /db_xref="WormBase:WBGene00059842" /translation="MIVSDSKNKCFYCRCHSYLDETVFLNTIKLLSNTDTAGKRADGL RLAKTRYISIVFHSIKDDQHRKSLKDLAEKVENCKIPMFRNEQSLFRNSMQSSDSIPN FTKCMHKSDLILCYFRRELKSMNWKNIRKLLNLYPKHCLLYDHIDKFIKTTMKRNIKP QEIVETLMQFSQANNPYYIEKSDFEMLLKKSILPSCTNVTKTMFTRNNTEKSFISSKD VELLKRKIDEYVHNSKEGYVKSKEYGKVRTKVSEWRKEKKVKDGENLVVVDALNYGIG QDRKEWNSVSKQFRHVVFATRFPPMPIRDEVIKRYNGNALFCDKLSADDLIILRMAIE FGRQTSLVTNDQYRDHRRVVCNGDPDVEKVWDDFLIDAVYRHKDGNIETHRNFNLRVH KVNGHWILPVLDSEGNSDKIRDLKVFRIALA" gene complement(<1492743..>1493176) /locus_tag="CRE_29857" /db_xref="WormBase:WBGene00059841" mRNA complement(join(<1492743..1492806,1492873..1492967, 1493015..1493077,1493126..>1493176)) /locus_tag="CRE_29857" /product="hypothetical protein" /db_xref="WormBase:CRE29857" /db_xref="WormBase:WBGene00059841" CDS complement(join(1492743..1492806,1492873..1492967, 1493015..1493077,1493126..1493176)) /locus_tag="CRE_29857" /note="contains similarity to Saccharomyces cerevisiae Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus and is induced in response to the DNA-damaging agent MMS; YMR244C-A is not an essential gene; SGD:YMR244C-A" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12676.1" /db_xref="WormBase:CRE29857" /db_xref="WormBase:WBGene00059841" /translation="MGKEEPSLKSERRKCYEARDKYVECIDKFLAQGKSEKESEKACR AERNNFEGNCPTSWVNHFIRKYQFERYKKTLAEQGVNIADQNALSD" gene complement(<1493447..>1495998) /gene="Cre-aph-2" /locus_tag="CRE_29858" /db_xref="WormBase:WBGene00059840" mRNA complement(join(<1493447..1493517,1493570..1493831, 1493877..1494137,1494188..1494440,1494493..1494744, 1494799..1495137,1495191..1495776,1495854..>1495998)) /gene="Cre-aph-2" /locus_tag="CRE_29858" /product="CRE-APH-2 protein" /db_xref="WormBase:WBGene00059840" CDS complement(join(1493447..1493517,1493570..1493831, 1493877..1494137,1494188..1494440,1494493..1494744, 1494799..1495137,1495191..1495776,1495854..1495998)) /gene="Cre-aph-2" /locus_tag="CRE_29858" /note="contains similarity to Pfam domain PF05450 Nicastrin; contains similarity to Interpro domain IPR008710 (Nicastrin)" /codon_start=1 /product="CRE-APH-2 protein" /protein_id="EFP12372.1" /db_xref="InterPro:IPR008710" /db_xref="PFAM:PF05450" /db_xref="WormBase:CRE29858" /db_xref="WormBase:WBGene00059840" /translation="MKSWLAIVLLIGGVRCDGFSDQVFKTLYIGEGNACYRTFNKTHE FGCQATKENENGLIVRIDKQEDFENLESCWRALYPAFNGKFWALLPVNLIGRNTISLL KSSECLAGVILYNSPQPQHPEEEITSASHDADCPNAASDYYFQNKKEEYCERKINSGG SITRDGLMRTDWRIQMVFIDKSDDLSVIERCHSLFNIPKENGTTGYPYCGMSFRLANM AAGNSEICNRRGKSEAKLFQANFDSGEVPQICGAMHSDNIFAFPTPIPSSRSNETMNS SKYMMITSRMDSFGMIPEISVGEVSVLTSIISVIAAARSMGTQLEKWQKASNESNKNV FFAFFNGESLDYIGSGAAAYQMGKDIFPQRKIRPDIVRIHPIHANEIDYVLEVQQIGV SKGRKYYVHVDGERYDKNKTSTNKLMDRIERGLRSHGFDLEKLTDSGTRVPPASWHSF AKADPTVQSLLIAPFKEEYEYRRINSILDKNQWTNDEKEKAIQEIEAVATSILAASAD YVGLETDDVVAKVDKALIATLFDCLIVSNFWFDCDFMKKLDGDRYHKLFNSYGFNEKS TYISMETHTAFPTVLHWLTIFALGSDKETLNVKSETSCSHLGEFQAMYTYTWQPSPYT GNFSCLKSSIGKKVMVSPAVDPYTPEEEMNTRYSTWMESVYVIESVNLYLMEDTSFEY TMLIIAVLSALLSMFAVGRCSESTFIVDEGEPAAEGGEPL" gene complement(<1496219..>1500023) /gene="Cre-ears-1" /locus_tag="CRE_29859" /db_xref="WormBase:WBGene00059838" mRNA complement(join(<1496219..1496338,1496404..1497789, 1497838..1498185,1498317..1498410,1498462..1499829, 1499884..>1500023)) /gene="Cre-ears-1" /locus_tag="CRE_29859" /product="CRE-EARS-1 protein" /db_xref="WormBase:WBGene00059838" CDS complement(join(1496219..1496338,1496404..1497789, 1497838..1498185,1498317..1498410,1498462..1499829, 1499884..1500023)) /gene="Cre-ears-1" /locus_tag="CRE_29859" /note="contains similarity to Pfam domains PF00749 (tRNA synthetases class I (E and Q), catalytic domain), PF00458 (WHEP-TRS domain) (5), PF03950 (tRNA synthetases class I (E and Q), anti-codon binding domain); contains similarity to Interpro domains IPR000738 (WHEP-TRS), IPR000924 (Glutamyl/glutaminyl-tRNA synthetase, class Ic), IPR009068 (S15/NS1, RNA-binding), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR004526 (Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic); coded for by the following C. remanei cDNAs: DR781479, DR409255" /codon_start=1 /product="CRE-EARS-1 protein" /protein_id="EFP12448.1" /db_xref="InterPro:IPR000738" /db_xref="InterPro:IPR000924" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR004526" /db_xref="InterPro:IPR009068" /db_xref="InterPro:IPR014729" /db_xref="PFAM:PF00458" /db_xref="PFAM:PF00749" /db_xref="PFAM:PF03950" /db_xref="WormBase:CRE29859" /db_xref="WormBase:WBGene00059838" /translation="MVITRNLVLKADRKNAPYASLLALAASGFSLEESVQFVDGQKLV LNLDGEVLSNDVEIARIISQSTASADRLLGTSVVDFVVVDNITNIVAEAVNKNDFSEL MKKDFPTSIFDNLLTVADFAIFSVAHNNPQLKTKFTGIVDRILKDSSLASAHNLVGLY KVAAAPSKNVASVGKEKKKDEGKFVELPGAEKGKVVVRFPPEASGYLHIGHAKAALLN QYYQQEFEGQLIMRFDDTNPAKENAHFEHVIKEDLAMLNIVPDRWTHSSDHFEMLLTM CEKLLKEGKAFVDDTDTETMRKEREDRQDSRNRSNTPEKNLQLWEEMKKGTERGLTCC VRIKIDMKSNNGAMRDPTIYRCKPEEHVRTGLKYKVYPTYDFTCPIVDSVEGVTHALR TTEYHDRDDQYYFICDQLGLRRPYIWEYARLNMTNTVMSKRKLTWFVDEGHVEGWDDP RLPTVRGVMRRGLTVDGLKQFIVAQGGSRSVVMMEWDKIWAFNKKVIDPVAPRYTALE TTTPLVLVELTDSIEDDISSVSLHPKNAEIGNKDVHKGKKLFLEQVDASALKEGEIVT FVNWGNIKLGKIEKKGNVITKITATLQLENTDYKKTTKVTWLGVVKAESGKTIPVVTA EYDHIISKAIIGKDEDWKQFINFDSVHYKKMVGEPAIQNVKKGDIIQLQRKGFYIVDQ PYNKKSEISGAETPLLLIAIPDGHTGKEAEKTPKVPTATSATAASSGGSDALQLYSSI EEQGNLVRDLKAKDAKSQETKNAIAKLLDLKKKFKDVTGSDFKPGQPPAAASAPSISE STSGKSEALQIYTSIEEQGNLVRDLKAKDAKSQDTKNAIAKLLELKKKFKDVTGSDFK PGQPPAAAPAVSGSNNALNIYNQIEAQGNTVRDLKTKDAKSQATKDAIAKLLELKKQY KDATGADYKPGSAPSSASAGAPKPAVDGAKIAQQIEEQGNLVRELKTKDAKSQETKDA IAKLLEFKKQYKEVTGADYKPGTVPAPTPASVEAAVPIPVADGTTVAKNIEEQGNLVR ELKTKDAKSQATKDAISKLLELKKQYKDLTGSDYKPGGAPATPAQAPAASPSSAAFDE TALLKEIDEQAVIVREAKAKDPKSQESADAINKLLSLKANFKKVTGKDVPAPANAQNK KGKKK" gene <1500640..>1502774 /locus_tag="CRE_29631" /db_xref="WormBase:WBGene00059837" mRNA join(<1500640..1500801,1500855..1501140,1501186..1501503, 1501870..1502027,1502075..1502264,1502310..1502527, 1502574..>1502774) /locus_tag="CRE_29631" /product="hypothetical protein" /db_xref="WormBase:CRE29631" /db_xref="WormBase:WBGene00059837" CDS join(1500640..1500801,1500855..1501140,1501186..1501503, 1501870..1502027,1502075..1502264,1502310..1502527, 1502574..1502774) /locus_tag="CRE_29631" /note="coded for by the following C. remanei cDNAs: DY527025" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12306.1" /db_xref="WormBase:CRE29631" /db_xref="WormBase:WBGene00059837" /translation="MRLVKPLIVVVSVVILNAFAQQPTFFRIKRQAYPPNPAPFKPRQ EDYNLPPFYQPNPGRDASSLSPLFPFHSQYSNGLDINPGTRVTVDGNLNVPIMGWGMW DYKGGVKMGRPNTRVGFGSLNAPTNVLGISGDTIAALAKDGTFQQSRQNVPAVPVAVL PGNFVPVRCRPPMCNPFVHNMAFGVDVEPGDDYLFDGGFDFPIPLAPSGVGVRFPMSG AVNVGTDPLLITYGHGMGPVEPPGFRSKKRGSEEDDLRECQKYGGDEPLVIPVKGPQA MFPALVTADNFPLFPFTDQFNTGVEINPANKVSMAGDLIVPVPGWGNFDVDGNVYYGH INVDAKVGYQIRPTNHLNIKPETLALLGQNPAFREARKKAKEVIVGRIPYGYEPIKCK PPYCNPFVHHAGVAVEVEQGDDSFFIGGIDFPLPIGENGAGVRFPLSGAVEQGTSPYA YAHGNAFNPVSPFDFRKIDSDDVKPDWPYAPGSRRRSPEKKMNNEQKNAFYSKFYDKL PQ" gene <1503113..>1504287 /locus_tag="CRE_29632" /db_xref="WormBase:WBGene00059836" mRNA join(<1503113..1503200,1503243..1503358,1503405..1503633, 1503857..>1504287) /locus_tag="CRE_29632" /product="hypothetical protein" /db_xref="WormBase:CRE29632" /db_xref="WormBase:WBGene00059836" CDS join(1503113..1503200,1503243..1503358,1503405..1503633, 1503857..1504287) /locus_tag="CRE_29632" /note="contains similarity to Brugia malayi Hypothetical 30.1 kDa protein ZC434.4 in chromosome I, putative.; TR:A8NWW2" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12531.1" /db_xref="WormBase:CRE29632" /db_xref="WormBase:WBGene00059836" /translation="MECCKKKRVKKVAKRKIEKVIHLDPDALRYLRFKIGGKYTAERH LFLKKDPSKEASLIVSNIPAFVGEEVILAIINQFAPFEVEESFVQRSNAADSSLSQGQ LTMSITYEKPEAVIQVLALCQDVGPFTVTDFLEEPEFPSVLKDSTSLYKKLFPSEEQI QEMADTYVERYDVVQAEARKEAKRKYSEPDEEGWITVTKVKKAAKSVKLNKEDVPLIG GLNGKKKKVDLAYYTFQIKKNRQESKTSFSLLAYFVNNFVSEAQELLKKFEEDRKRIA QLKQARNFKPM" gene complement(<1504952..>1505734) /gene="Cre-rps-7" /locus_tag="CRE_29860" /db_xref="WormBase:WBGene00059835" mRNA complement(join(<1504952..1505071,1505152..1505328, 1505375..1505515,1505564..>1505734)) /gene="Cre-rps-7" /locus_tag="CRE_29860" /product="CRE-RPS-7 protein" /db_xref="WormBase:WBGene00059835" CDS complement(join(1504952..1505071,1505152..1505328, 1505375..1505515,1505564..1505734)) /gene="Cre-rps-7" /locus_tag="CRE_29860" /note="contains similarity to Pfam domain PF01251 Ribosomal protein S7e; contains similarity to Interpro domains IPR005829 (Sugar transporter, conserved site), IPR000554 (Ribosomal protein S7e); coded for by the following C. remanei cDNAs: DR777380, DR779029, DR781204, DT933758, DR779591, DR781982, DT933473, DR775847, DY526200, DR406968, DR407135, DY525064, DY525552, DR777573, DR407059, DR776338, DR407062, DY524638, DY524833, DR407094, DY528654" /codon_start=1 /product="CRE-RPS-7 protein" /protein_id="EFP12708.1" /db_xref="InterPro:IPR000554" /db_xref="InterPro:IPR005829" /db_xref="PFAM:PF01251" /db_xref="WormBase:CRE29860" /db_xref="WormBase:WBGene00059835" /translation="MVFFSGLNMPEIIGKLLKSDGKVVSEIEKQVSQALIDLETNDDV QSQLKELYIVGVKEVELGNKSAIIIYVPVPQLKAFHKIHPALVRELEKKFGGRDILIL AKRRILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEVVGRRIRVKLDGKK VYKVHLDKSHQTNVGHKVGVFASVYRKLTGKDVTFEFPDPIF" gene complement(<1506267..>1508820) /locus_tag="CRE_29861" /db_xref="WormBase:WBGene00059834" mRNA complement(join(<1506267..1506602,1506648..1506878, 1506921..1507176,1508452..1508558,1508605..>1508820)) /locus_tag="CRE_29861" /product="hypothetical protein" /db_xref="WormBase:CRE29861" /db_xref="WormBase:WBGene00059834" CDS complement(join(1506267..1506602,1506648..1506878, 1506921..1507176,1508452..1508558,1508605..1508820)) /locus_tag="CRE_29861" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12642.1" /db_xref="WormBase:CRE29861" /db_xref="WormBase:WBGene00059834" /translation="MDEKVSEGERSMKTSSQSSSSSVNTSDVDALGQRTDHLIYNCYE FEKSTNSLNEYRHWIKEKETANVEVLEKALSSILDLGESFGKLGPKMDKDIEDSLAWL FAKVGWRPTNIMHPNIGYAGYEDMLLRYCDLKKELDKMRVINLRASNIRTQVVQQQLE TRQMNDKLDELRYRWKFLTVTKTIASRNLGYNDGLSMLFSLPILLPGIIFHEKTSHTY AYSLLDIFKRLLVVAEAIQYERSPTNDPIVTNSNILYHLSQPSVPSLYVPIQYADSNG EVTAPEEKILPVARDSAHTLIASENGEVHAPENSILPIARDSALSLVSSENGEVSATS EYNMPIAKDSATTLGSNESPKPLSKTQLTSGVEVKRYTNSIKSQRRG" gap 1507561..1508099 /estimated_length=539 gap 1509637..1512476 /estimated_length=2840 gene <1512537..>1519596 /locus_tag="CRE_29633" /db_xref="WormBase:WBGene00059831" mRNA join(<1512537..1512643,1512694..1512982,1513031..1513133, 1513180..1513367,1513415..1513541,1513589..1513954, 1514000..1514170,1514213..1514538,1515338..1515786, 1515834..1516389,1516618..1516727,1516772..1516916, 1516966..1517175,1517228..1517747,1517795..1518052, 1518098..1518272,1518320..1518559,1518608..1518949, 1518995..1519118,1519164..1519248,1519292..>1519596) /locus_tag="CRE_29633" /product="hypothetical protein" /db_xref="WormBase:CRE29633" /db_xref="WormBase:WBGene00059831" CDS join(1512537..1512643,1512694..1512982,1513031..1513133, 1513180..1513367,1513415..1513541,1513589..1513954, 1514000..1514170,1514213..1514538,1515338..1515786, 1515834..1516389,1516618..1516727,1516772..1516916, 1516966..1517175,1517228..1517747,1517795..1518052, 1518098..1518272,1518320..1518559,1518608..1518949, 1518995..1519118,1519164..1519248,1519292..1519596) /locus_tag="CRE_29633" /note="contains similarity to Pfam domain PF09324 Domain of unknown function (DUF1981); contains similarity to Interpro domains IPR000904 (SEC7-like), IPR015403 (Protein of unknown function DUF1981, SEC7 associated); coded for by the following C. remanei cDNAs: DR776850" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12432.1" /db_xref="InterPro:IPR000904" /db_xref="InterPro:IPR015403" /db_xref="PFAM:PF09324" /db_xref="WormBase:CRE29633" /db_xref="WormBase:WBGene00059831" /translation="MSESGGNDEPIGEGQIDFALAPSVITNPHTWRALYQIVDQLIRL MITDPSLASSLEALFHKAFLFPRLDQRSEALKLIKKILGDGSKMSKIAKSCVITKSLS LWRMLMTCIVECTNPQLELSIDSVKTVVAMLDGMKQLATHRFFTDEERKIIAETFVSF EDTIVNSFSLKCSERVSEISTVDEDNENVFDQSGSSSTEDPMAAKLRRLEQKFRCAPI TIRRSSELDESSERNTAKRFVQSFSENLDIIASPKNTLSIDEAILQFASDFYANFCSV HADAYKSRSKIQQEFLNTDAIYLTTYAALSYVSRPDTYTLEDLKKTVLNSGSVVHVAI GWLEKVYDNLKLADVHAGQITPTLKNVINDFDGQTKGLLSDVEKLKRIKSRVDEVECT EERNVARWMTSSAWQMIIDVLSTFLAVKEKRKTREKIREAISVSICGMRNLCAVAQVL GLESRCGWIFEQLVETSCCLEDLRDDAIAADNEQKSTCTSREHLLAMQLVLDEARIAI HASSCWKHIVRCSEYVWELEKYIYGALCYEKPSRLKFLRRKTEEKEEDKEENNPTNSG IFSMSNDYEYLGDSQMPPPIAPRPPTDAPPELITGLPHTPALKANDDVDLESNRPRGN NNLSFSDGLNPKRSEPSVATTKTSRSSESDEESKKETKKEKEEKKPAKCGTCWCIFAA VTIFLAVISLLGLGAFLIMNMDGEVPISEALNGTNETSTSMASFVTTTPVSVIIPNKI IPLNTSTVLPLVESTTPLVMKTAESSEDEATTVSSDGTSTESIETTTISVDTQSTTSL GVHPVDTSSSSSDLSTSTTTTDLTASTEPTLEDALPIEDDTTQSNVAVEVSTPSSAKT TPVSSDSETTNDLNELSTTGSSSATLNVTSTEAPTDELKTTAADSSIENALGDEPTLS VHSLNRAICVLIAKVDRFYSQVCRELCLPALHDLCVAIVSSSENRVFYSAQKHIHLTA PVSLLTRISDIISTLSHRPLIHQMFIYPLVSSHFVKVCQCDQESRIAASALAEVVTRL LITESPGMSFNQTLIVPFQTASCSENCSEETKEQLLCALSQLVLSQADKIGSGWKPLF GSLKAVGAARDEKVHWCAIDVISSYLRIDSPSILSSSILECVPCVVNLLQNSDDSSEI SSAALRLFPNIYSLILYLYSTPHIPNYHLLHRSDLRSKCLDTVELDQDPVAVPHGPLP WDDKQTYEIAAVELFLTFMDQICGTLLTSSSTTQKNLLDMIGRLLVDISNKPLGADSG GVCMSAVILPYVQKWIRRPDVEEVKILKQVIGACTQTVIDMLELDKMSSWRDRLLRDI CSLIVECVLFDKTCAVAPAYFTLIANNSAGFSTQQWNIFSHFLASASSQSLRHIRLLN SFFVRSSTDENGDIGDVTSFNPERLSFRQLLAAIQVFSSEKHVKQKEEEEDLSSGVAL IMLSHGADTHRLEVHSIVSTLFTHCLLLQLIASLLLSEDSNPKLKASLIGTTTPIDPQ LDDSIYPILYNILNESCETSLDFDNRPAVGSLLSIMLGYSHANLLKVLVSSNLIKTMS LLRRFEKTKKQELLEETAKSVKSRSVDLKSVEFEVSTRRSAIVSREHAITQYHLVPVE NGEENAYRLVSQEFVDGALSEYDKHRERLKPFIPDRKNPFQHAIEDIDPISIRSNDQK KEDFDETRLAAYRDICLIPLRYVADNLLREHLPDFLPAVTQIVLSSPDLAVRQLAVDF MSRLA" gene complement(<1519915..>1521853) /locus_tag="CRE_29862" /db_xref="WormBase:WBGene00059829" mRNA complement(join(<1519915..1520278,1520328..1520456, 1520566..1520731,1520786..1520903,1520952..1521021, 1521825..>1521853)) /locus_tag="CRE_29862" /product="hypothetical protein" /db_xref="WormBase:CRE29862" /db_xref="WormBase:WBGene00059829" CDS complement(join(1519915..1520278,1520328..1520456, 1520566..1520731,1520786..1520903,1520952..1521021, 1521825..1521853)) /locus_tag="CRE_29862" /note="contains similarity to Homo sapiens Neurofilament heavy polypeptide; ENSEMBL:ENSP00000311997; coded for by the following C. remanei cDNAs: DT933392" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12570.1" /db_xref="WormBase:CRE29862" /db_xref="WormBase:WBGene00059829" /translation="MSSSRKPLIRSSSHSDRPATMRNWPLFVFLMCLVLFFYAFYIYQ AQGAVLSQTNEEVRQLSAQLSLTKGKLVGSMADLETSNSEKKTISTQLEDITKKNDEC MVSLRNTKLRVDTLEKDGKSNTDNYAKMQEELTALKSKAEELQRNNTALSSLVSTQTQ LITQLNQTIGIIKFEKEELKNSVSLNNLTPKNEKLAPEVESQSQNEPNPVKDGKEKEV SVSTPTTTAAQKVEGLEEADGKEVDDHNKEPSTVSASSTQSPVGKLEENNPENEEPEP VVAEPDVAEPEEKET" gene <1522050..>1526955 /gene="Cre-wts-1" /locus_tag="CRE_29634" /db_xref="WormBase:WBGene00059828" mRNA join(<1522050..1522397,1523296..1523553,1523669..1523911, 1524273..1524472,1524521..1524626,1524678..1524788, 1524846..1525832,1526283..1526300,1526352..1526528, 1526752..>1526955) /gene="Cre-wts-1" /locus_tag="CRE_29634" /product="CRE-WTS-1 protein" /db_xref="WormBase:WBGene00059828" CDS join(1522050..1522397,1523296..1523553,1523669..1523911, 1524273..1524472,1524521..1524626,1524678..1524788, 1524846..1525832,1526283..1526300,1526352..1526528, 1526752..1526955) /gene="Cre-wts-1" /locus_tag="CRE_29634" /note="contains similarity to Pfam domains PF00069 (Protein kinase domain), PF00433 (Protein kinase C terminal domain); contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000961 (Protein kinase, C-terminal)" /codon_start=1 /product="CRE-WTS-1 protein" /protein_id="EFP12705.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="PFAM:PF00069" /db_xref="PFAM:PF00433" /db_xref="WormBase:CRE29634" /db_xref="WormBase:WBGene00059828" /translation="MQREKDKRDFCRENSLQKRERDYTHTRRHSCITTSHLFPILFLS LLLHSHRLRPSPVFVSVRPPFALYSPGMRPVVATTATTPNGASATGNDIRQRGIAPAP SFVPNSAADVHHSSDIRVGRHRAKLDEIRASLKAYEHESGPPTSSNHVLHGSQTTPSS SSVSHSDITNDNTEVMNSSSSTAATTTTTVSSGVVSHSNSFRTEGGPKMRIAPMPQRH LMMETGNEMIYRTGKEMIRNGNIPTNSTQPTVEESIRIYPSGYRYEMPTPAYHMNNNA PQYSPGYSRPPPPAYDASPTNTRMTPVAADNYRTHLHIKTQPAPKIQTSQILLQHNKN MAPPPPGKSTISIETISEERKADNIQRLYHTSMDKKTASSVVSINVASPHTTKVNVGD SPLPSKSFIIGPRYTTEIDRSKNFVNYKDELRPDPRLIPSTSDANHEDFRPILFKPSN LDITFKSRPQAPPPQYSQPSEPPPKRVSSPIDRALLDPYLKNTRRVQPCKPNMLRFYM EQHVERLLQQYREREKRMRQLQKEMAAAQLPDMMREKMLGILQQKESRYTRLRRQKMS KSHFTVISHIGVGAFGKVSLVRKKDTGKVYAMKSLEKADVIMKQQVFLIKKISIKFEL CFQAAHVKAERDILAEADSPWIVRLFFSFQDDSCLYFIMEYVPGGDMMTLLIQKGIFE EPLARFYIAELTCAIEYVHSVGFIHRDLKPDNILIDQHGHIKLTDFGLCTGLRWTHDR RYWFILNISENCLMMVQQLICDVSTRLGSRGGAAQVKQHPWFKGIDWENLRKLRAEYI YIPRVAHDEDTSNFETFQDNDRTDKPNVRGLHNPAFYEFTYRHFFDTDSVGCPSLRPA RRRSLRPLLENGIFDESVSEEDSSSHI" gene <1536184..>1571057 /locus_tag="CRE_29635" /db_xref="WormBase:WBGene00059827" mRNA join(<1536184..1536226,1536921..1536987,1537034..1537118, 1537164..1537244,1537295..1537429,1537476..1538663, 1567423..1569491,1569575..>1571057) /locus_tag="CRE_29635" /product="hypothetical protein" /db_xref="WormBase:CRE29635" /db_xref="WormBase:WBGene00059827" CDS join(1536184..1536226,1536921..1536987,1537034..1537118, 1537164..1537244,1537295..1537429,1537476..1538663, 1567423..1569491,1569575..1571057) /locus_tag="CRE_29635" /note="contains similarity to Brugia malayi Putative uncharacterized protein.; TR:A8PHI2" /codon_start=1 /product="hypothetical protein" /protein_id="EFP12390.1" /db_xref="WormBase:CRE29635" /db_xref="WormBase:WBGene00059827" /translation="MSDNPTRQNPPSRTGRELERPRWTVTRREETRHSPSRSTSPFQS RSVTTTERVHIVQLPVSENSQVSPAHILALSPHGNTSQSVSSIVTTSQAEGVPLIGAL TASGVPLFNGILFNRDTKQTTTIITTTTTTYKILEVSDSDSLSDDYELVDDNTLTVDV DLTERATSPSYVIVSKSESQAPMSPITKAKLNIELEIPQRASQKPDDSYHSIESTRFI SEMTESQYTADDERQPSTPGSEEFEKFDVSHSFRYRTKHFEFQMNYPIHQEYDHNTIT TTSRNTNIEEFPLTQHVDLYHNQFYYDQIPGPSSPKPRKRSIKKKETIKLKTSHFDYP ISEQYDGPLDSTSRASNIHDIPLTTEVNAYPSEFSYEKLPEHVVPVVVEETEKKDEPS LKSKITGLFKKSPSHLDYPISEQHDGPLDSTSRASNIHDIPLTTEVNAYPSEFSYEKL PEHVVPVVIEETEKKDEPSLKSKITGLFKKSPSHLDYPISEQYDGPLDSTSRASNIHD IPLTTEVNAYPSEFSYEKLPEHVVPKSPSHLDYPISEQYDGPLDSTSRASNIHDIPLT TEVNAYPSEFSYEKLPEHVVPVVIEETEKKDEPSLKSKITGLFKKSPSHLDYPISEQY DGPLDSTSRASNIHDIPLTTEVNAYPSEFSYEKLPEHVVPVVMEETEKKDEPSLKSKI TGLFKKSPSHLDYPISEQYDGPLDSTSRASNIHDIPLKTEVNAYPSEFSYEKLPEHVV PVVIEEPEKKDEQSLKSKITGLFKKSTAHSDYPISDQYDGPLDSTHRAENLQDVPLSH EVASYPSEFSYEKLPEHVVPVVIEEPEKKDEQSLKSKITGLFKKSPSHLDYPISDQYD GPLDSTHRAENLQDVPLSHEVASYPSEFSYEKLPEHVVPVVIEEPEKKDEQSLKSKIT GLFKKSPSHLDYPISDQYDGPLDSTHRAEILQDVPLSHEVASYPSEFSYEKLPEHVVP VVIEEPEKKDEQSLKSKITGLFKKSPSHLDYPISDQYDGPLDSTHRAENLQDVPLSHE VASYPSEFSYEKLPEHVVPVVIEEPEKKEEQSLKSKITGLFKKSTAHSDYPISDQYDG PLDSTHRAENLQDVPLSHEVASYPSEFSYEKLPVHVVPVLIEEPEKKDEQSLKSKITG LFKKSPSHLDYPISDQYDGPLDSTHRAENLQDVPLSHEVASYPSEFSYEKLPEHVVPV VIEEPEKRRSIIEVQITGLCPLLMSSHLIIEFSYRSYKXXXXQKKKGRTIIEVQDHRI LKKSSSHLDYPISDQYDGPLDSTHRAENLQDVPLSHEVASYPSEFSYEKLPEHVVPVV IEEPEKKDEQSLKSKITGLFKKSPSHLDYPISDQYDGPLDSTHRAENVQDVPLSHEVA SYPSEFSYEKLPEHVVPVVNEEPEKKDEQSLKSKITGLFKKSTAHSDYPISDQYDGPL DSTHRAENLQDVPLSHEVASYPSEFSYEKLPEHVVPVVIEEPEKKDEQSLKSKITGLF KKSPSHLDYPISDQYDGPLDSTHRAENVQDVPLSHEVASYPSEFSYEKPPEHVVPVVI EEPEKKDEQSLKSKITGLFKKSPSHLDYPISDQYDGPLDSTHRAENLQDVPLSHEVAS YPSEFSYEKLPEHVVPVVIEEPEKKDEQSLKSKITGLFKKSPSHLDYPISDQYDGPLD STHRAENLQDVPLSHEVASYPSEFSYEKLPEHVVPVVIEDPEKETNNH" gap 1538799..1567363 /estimated_length=28565 gap 1569634..1569643 /estimated_length=10 CONTIG join(AAGD02012388.1:1..51015,gap(10),AAGD02012389.1:1..16221, gap(10),AAGD02012390.1:1..14825,gap(10),AAGD02012391.1:1..41771, gap(330),AAGD02012392.1:1..18567,gap(88),AAGD02012393.1:1..3468, gap(10),AAGD02012394.1:1..15780,gap(19),AAGD02012395.1:1..27205, gap(693),AAGD02012396.1:1..16085,gap(10),AAGD02012397.1:1..10710, gap(10),AAGD02012398.1:1..53183,gap(218),AAGD02012399.1:1..9364, gap(8746),AAGD02012400.1:1..47348,gap(136),AAGD02012401.1:1..23743, gap(10),AAGD02012402.1:1..47730,gap(903),AAGD02012403.1:1..71558, gap(10),AAGD02012404.1:1..3760,gap(2884),AAGD02012405.1:1..41292, gap(10),AAGD02012406.1:1..65789,gap(10),AAGD02012407.1:1..24868, gap(629),AAGD02012408.1:1..20851,gap(10),AAGD02012409.1:1..14728, gap(10),AAGD02012410.1:1..25858,gap(10),AAGD02012411.1:1..81354, gap(10),AAGD02012412.1:1..44998,gap(455),AAGD02012413.1:1..105431, gap(10),AAGD02012414.1:1..50210,gap(1412),AAGD02012415.1:1..31873, gap(10),AAGD02012416.1:1..131274,gap(10),AAGD02012417.1:1..205472, gap(10),AAGD02012418.1:1..1400,gap(10),AAGD02012419.1:1..49794, gap(363),AAGD02012420.1:1..12127,gap(10),AAGD02012421.1:1..110832, gap(539),AAGD02012422.1:1..1537,gap(2840),AAGD02012423.1:1..26322, gap(28565),AAGD02012424.1:1..2270,gap(10),AAGD02012425.1:1..1533) //