LOCUS       DS113928               44058 bp    DNA     linear   CON 15-DEC-2022
DEFINITION  Trichomonas vaginalis G3 strain G3; ATCC PRA-98 unplaced genomic
            scaffold 1047229023601, whole genome shotgun sequence.
ACCESSION   DS113928 AAHC03000000
VERSION     DS113928.1
DBLINK      BioProject: PRJNA16084
            BioSample: SAMN02953626
KEYWORDS    WGS.
SOURCE      Trichomonas vaginalis G3
  ORGANISM  Trichomonas vaginalis G3
            Eukaryota; Metamonada; Parabasalia; Trichomonadida;
            Trichomonadidae; Trichomonas.
REFERENCE   1  (bases 1 to 44058)
  AUTHORS   Carlton,J.M., Hirt,R.P., Silva,J.C., Delcher,A.L., Schatz,M.,
            Zhao,Q., Wortman,J.R., Bidwell,S.L., Alsmark,U.C., Besteiro,S.,
            Sicheritz-Ponten,T., Noel,C.J., Dacks,J.B., Foster,P.G.,
            Simillion,C., Van de Peer,Y., Miranda-Saavedra,D., Barton,G.J.,
            Westrop,G.D., Muller,S., Dessi,D., Fiori,P.L., Ren,Q., Paulsen,I.,
            Zhang,H., Bastida-Corcuera,F.D., Simoes-Barbosa,A., Brown,M.T.,
            Hayes,R.D., Mukherjee,M., Okumura,C.Y., Schneider,R., Smith,A.J.,
            Vanacova,S., Villalvazo,M., Haas,B.J., Pertea,M., Feldblyum,T.V.,
            Utterback,T.R., Shu,C.L., Osoegawa,K., de Jong,P.J., Hrdy,I.,
            Horvathova,L., Zubacova,Z., Dolezal,P., Malik,S.B., Logsdon,J.M.
            Jr., Henze,K., Gupta,A., Wang,C.C., Dunne,R.L., Upcroft,J.A.,
            Upcroft,P., White,O., Salzberg,S.L., Tang,P., Chiu,C.H., Lee,Y.S.,
            Embley,T.M., Coombs,G.H., Mottram,J.C., Tachezy,J.,
            Fraser-Liggett,C.M. and Johnson,P.J.
  TITLE     Draft genome sequence of the sexually transmitted pathogen
            Trichomonas vaginalis
  JOURNAL   Science 315 (5809), 207-212 (2007)
   PUBMED   17218520
REFERENCE   2  (bases 1 to 44058)
  AUTHORS   Carlton,J., Miller,J., Delcher,A.L., Schatz,M., Schobel,S. and
            Fraser,C.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAY-2005) The Institute for Genomic Research, 9712
            Medical Center Drive, Rockville, MD 20850, USA
FEATURES             Location/Qualifiers
     source          1..44058
                     /organism="Trichomonas vaginalis G3"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1047229023601"
                     /strain="G3; ATCC PRA-98"
                     /db_xref="ATCC:PRA-98"
                     /db_xref="taxon:412133"
                     /chromosome="Unknown"
     mobile_element  complement(419..970)
                     /mobile_element_type="transposon:transposon-like, repeat
                     family R26b"
     mobile_element  complement(989..1504)
                     /mobile_element_type="transposon:transposon-like, repeat
                     family R26b"
     repeat_region   complement(1545..3359)
                     /note="repeat family R25c"
     assembly_gap    3479..3578
                     /estimated_length=unknown
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     repeat_region   3761..4537
                     /note="repeat family R25b"
     assembly_gap    5074..5173
                     /estimated_length=unknown
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <6163..>6387
                     /locus_tag="TVAG_302750"
     mRNA            <6163..>6387
                     /locus_tag="TVAG_302750"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302750A"
     CDS             6163..6387
                     /locus_tag="TVAG_302750"
                     /note="encoded by transcript TVAG_302750A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93135.1"
                     /translation="MEIYEKLKSETRFLIKKATDDIVSCELLAFKAVTFKKGNISSLY
                     SFDEDTKIPDDIRDDIRNDFRKVTETVRKV"
     gene            <6516..>7262
                     /locus_tag="TVAG_302760"
     mRNA            <6516..>7262
                     /locus_tag="TVAG_302760"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302760A"
     CDS             6516..7262
                     /locus_tag="TVAG_302760"
                     /note="encoded by transcript TVAG_302760A;
                     Identical to: GlimmerHMM gene prediction Covered by:
                     TigrScan gene prediction"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93136.1"
                     /translation="MSTQQILSFILSDLTISDIRILRDIANKRKDITESSFSYLQMYF
                     DEVKNDDLLLTMIRNIDTEIIYSKQILDKLVEIYGHLNKDEKEIKEDKPQEVYQKENL
                     KSDLSYIGNNKPLIADKICQIRTTLKNDKNLLNEVLLSISPNDVNISMGALAVLGFHN
                     YDITTTGYGYVNNVLRSVKDMTISEFKICVPDFKVPPPEYTLPNFLRNNAILLLYKLD
                     EVENLNEVLQVIRFANANNIGCPKVCLAQT"
     mobile_element  complement(7310..8326)
                     /mobile_element_type="transposon:transposon-like, repeat
                     family R8_Tvmar1"
     gene            <8706..>10769
                     /locus_tag="TVAG_302770"
     mRNA            <8706..>10769
                     /locus_tag="TVAG_302770"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302770A"
     CDS             8706..10769
                     /locus_tag="TVAG_302770"
                     /note="encoded by transcript TVAG_302770A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93137.1"
                     /translation="MSKDDLTFFVYDSVKEHVNFTTNNKELLSFGGMITKDSVAYDSF
                     PHSSECFQIQQKGIPFFVSYYNDQTVKAGFDHKDISNSTVVVNNISDVLPKFPTNFVG
                     QTVFVDGYGPGIIIESSNNKSKIYINDCGKEILLELRNDEFKILDQNFFKSILHGIVM
                     KCPSSIFTKNIKEHYEVEMQTKIILEIAKIQKVKFEIDWPRMLELVDKNTSYEVIAFF
                     KRNERRIFKEFYHNPDKISIKMVENCAKYLALDTELLSFSLKNSSSLIQSHYIYISLR
                     DNFNFLNKNNYRKFDRQISYLLDHLEATSMKCLNEYFMFIIKNNFDANSSFHLYELIL
                     MTYMETGKFSPAIPIYLDCYNPLGKYLLISDKNLDQLDSESYFENKVKRLFSNCFKDL
                     RKRIVKNIPERKYRIAFEFNRFESYPINPNADRLYMFERFIEYVDPIQLRKMKVKFIG
                     EGGIDAGGLRREAMTMIGEEIKNELFTIDSNGYYKLSTTDGLFQTFIGVYIAFCLNIK
                     APFSINLPDDVKNYIISDMKGHEEYESVRVDFQTAIPLNNLSNVRSLAIRRLVVFGNS
                     KQIINPADIINLLDGSSKRIRVFSEAIRLLNPEELPNLLAFITGSPTLDYNTTKISIA
                     SISGGDDENERTWPLPIAHTCFKKIDLPPYSDPNILVEKLRAAMSYSKIISDDIDLVD
                     FSLFH"
     gene            <11023..12586
                     /locus_tag="TVAG_302780"
     mRNA            <11023..12586
                     /locus_tag="TVAG_302780"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302780A"
     CDS             11023..12339
                     /locus_tag="TVAG_302780"
                     /note="encoded by transcript TVAG_302780A;
                     Identical to: GlimmerHMM gene prediction Covered by:
                     TigrScan gene prediction"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93138.1"
                     /translation="MNNLDYNELLLASKDYPEIFKKLYMLKSCNETEIFKLYDDIKNK
                     IIETKILLPSRVLTIITDACLYNNRYTRSYWTLCKKLIEEYHPNQIQFNSHIFYYFYY
                     KEYGVIFDKHIQRSIDKYEHFKISLDAHEKCTIYGAIMNDDKELLIWFTETSRFMHSK
                     ILKSDFYPNNSNLGYSLLELCCYYGSFNCFKFLRTKFNSKITPKCLQFSFLGGNPDIL
                     SECLKFEKPDKECMKYAIISHNIDFVTYLMNEHQIQIDIKLCNEFNNIEASFVYLDQT
                     KNIFDWLHFSSIFRIPSLWEYLISKGIPKNKNDNTVLQLAVAENEKEMVEFLLLHGAD
                     IDAANNNGKTPLILAMKNRYFDIAKYLVEHGANVNAVDNKGNDAINLAIDYNHIDLFK
                     LFLSHGNINVSPQKIPLHNAISSRNKELAELLISMGANVNEKDIKS"
     gene            <12847..>13188
                     /locus_tag="TVAG_302790"
     mRNA            <12847..>13188
                     /locus_tag="TVAG_302790"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302790A"
     CDS             12847..13188
                     /locus_tag="TVAG_302790"
                     /note="encoded by transcript TVAG_302790A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93139.1"
                     /translation="MLITHAVDINAKDKNGCTPLHYAVRRGLVQLVEFLVSHGVDVNS
                     KDNLGWTPLHYAAEQSRFEIVEELISNGANINEKNNKNQTALSLAIESHQYKPYYNKT
                     IELLKSNGGIC"
     gene            <13301..>15400
                     /locus_tag="TVAG_302800"
     mRNA            <13301..>15400
                     /locus_tag="TVAG_302800"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302800A"
     CDS             13301..15400
                     /locus_tag="TVAG_302800"
                     /note="encoded by transcript TVAG_302800A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93140.1"
                     /translation="MSHIKRRGQVAQLPDLDVINGDAPIPPTPTQNNPPPRMRSFSRG
                     RGVPVTEAPPAELAAQPVAAEKPAPAKPKQKEYTDVNDLPNKLEKEISQLHSSIAQAL
                     ITEVGTLQESAEKLTEMNTLVSNYLKTSTGSKDVESEVYKKLIMINSDHKVSATTIAN
                     KRRVIEKLQLIIEVAAIPEKWTRVLGQSTFPAQNVGSLQSILEEATKALLPENTPPIL
                     VGLVAAKNREADINTALMQFSNNFTRFFINIFKSPQELEQLASQSKGATNRPRIDTSQ
                     PAQPFSVNLENHTLLRAIYSYSWIILWIKNRYPDNFKTMVTAFHDASKLTTQSSLIDV
                     LEKSIKRITEMEPTKNKNDLFSAGSNMKEAQAQEIWDILNKTSDTIFDSSLKEKIILM
                     EFWGVEQYLDDLIPKAVLDKIESMWMHAGKFDMFFILRGASLNNEIISQKNLPLESIV
                     EALGHKWDKYIEKQSKLIMAEKFEYKKTTTLAPCKAFPKFVHYLLSKKLEYDNELLED
                     AFDKLCTALTDWLVQIVAPKAEKKKQERLIVVNTFYMFNKLKKSKTLKESTGFQQTMD
                     TMQEFMKQHIDFLLRDLVSKQWKNATKFFTQITTWRTECGLSPDVVTFQPSHTDEKFQ
                     ELVKDLEKNFQSNFSACQTVINNKIKETELRELILKRLSPYVDEMWKEWDDFAISCYN
                     EGILPTPETVHNIMFHD"
     gene            <15864..>18242
                     /locus_tag="TVAG_302810"
     mRNA            <15864..>18242
                     /locus_tag="TVAG_302810"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302810A"
     CDS             15864..18242
                     /locus_tag="TVAG_302810"
                     /note="encoded by transcript TVAG_302810A;
                     Identical to: GlimmerHMM gene prediction Covered by:
                     TigrScan gene prediction"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93141.1"
                     /translation="MIVANKVTVDPSTLNSLNHIYANQVQLNVNSTSSFPDLNNTVSI
                     HTINETGYLLCLMRIYDTEGLTVLHQTNQIMITGSRGSIILCKFSSVYLNIHFRNCSL
                     NLFTNQFSDLAHLALEYYISDSTCKVNNFYYDEIYFSSIHLKNSSLVLDCDFCPYNTS
                     IYEASSITLPRNITKMTELHVEEELILNPLNENSQISLRILKPKNVLTSSQFLSILTE
                     KFEIDRENVNITNIAVSVLENFIVELVGDADIEELMFKKQAKIKWNVNFDKRPKIYTE
                     RINNTKDQVIDIHSFNSSIYNNRTKFSSIIYQQIVLFSSTKPAPESFSLNYVDGDLPI
                     STIIQNINIFDGQKYIYGLSINDYPTKFYPEVYLDEYSFDNPENRNYLLNYADAQNHS
                     YFTSNITRKLYIRSSNSMDYTFDVYNFSSKFDLFYGSKETNKLVMKFNKDTNKCLNSL
                     FAEQGVLKIVSDSEEDIKLSLDYLSLDQLKEFSISENSKIHFTTINNLKAGIDLLKYL
                     KYDYVKNFQLQIIGYQFSLRVFEDGFSITKLNMNETIYFYNNKMENFVIYITDHQQMT
                     LSCDKSNPKPVKLRYIDTVTDITVKLIGKFPEDFKNNLMELPKGISVRLSVESEYIPI
                     DISDCAYASVDKTNNITFTTLPPARFSKSAKIAVLNSMVTLYMKNMILSNHSEMEFIS
                     TMRGSKSQFIIEELNVEESSSVSISSCMISSTINIKKNSSISFLNSNISTSIMNVELE
                     PENTNCIIDIKTTTDIVEPPEQINIKILLPKIMGKRTMKWTQEFANNVLSDK"
     gene            <18793..>19206
                     /locus_tag="TVAG_302820"
     mRNA            <18793..>19206
                     /locus_tag="TVAG_302820"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302820A"
     CDS             18793..19206
                     /locus_tag="TVAG_302820"
                     /note="encoded by transcript TVAG_302820A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93142.1"
                     /translation="MTDPAPAKQKCTEEELTANFNEAVNNLREAYNAANEDEKVQILL
                     LMDSLNDKASSKLDSVDSDLVHFLTERFKIVDLRKLIGDLQKELGLRSIEYIKKEIVI
                     NWFKSFWPKISTSNTDACKDFCTKYEEFRNSRSTN"
     gene            19380..19993
                     /locus_tag="TVAG_302830"
     mRNA            19380..19993
                     /locus_tag="TVAG_302830"
                     /product="ribosomal protein L27e, putative"
                     /note="transcript TVAG_302830A"
     CDS             19493..19912
                     /locus_tag="TVAG_302830"
                     /note="encoded by transcript TVAG_302830A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="ribosomal protein L27e, putative"
                     /protein_id="EAX93143.1"
                     /translation="MSLLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMG
                     IEKYPKKVTKDMPTEVLVKKTQVKLFVKAVNFNHVMLTRHNVKDEDFFKKISVEKVVA
                     ALKDAPAKKALLTEYAAVLRQKYLNNKMAWFFKPLQF"
     gene            <20366..24861
                     /locus_tag="TVAG_302840"
     mRNA            <20366..24861
                     /locus_tag="TVAG_302840"
                     /product="F/Y-rich N-terminus family protein"
                     /note="transcript TVAG_302840A"
     CDS             20366..24817
                     /locus_tag="TVAG_302840"
                     /note="encoded by transcript TVAG_302840A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="F/Y-rich N-terminus family protein"
                     /protein_id="EAX93144.1"
                     /translation="MKTSTIDSNDEFSTSEETLSDSSLYSDDNKMQTRPHKSKVVINE
                     DGEEEFVEELPKKKGLIQKIFSHRKTSDGTENEYYVKLRGKSYLHCQWMPEKELLANK
                     AKQLLARYLKVNANNPPNPPYFPEEYTVPEKVISSEEVEGVPFYIVKWKGLDYEDLTH
                     EPLTPLIQDLVDVYNKENVVPSEKDRFIPPHPKPTDFKLITAHDPSKSGKKIRSYQLE
                     GLNFFVNSWYHRKNAILADEMGLGKTCQASIFLNYLHKKQGISGPFIILAPLTTIPHW
                     ERELADWTDLKVIAFFGSKDKRKALLNYEFFYPGTTIPKFNVLVTTYEYAIKESKMFE
                     DKFIWQCIIVDEAHRLKNFESKLTVTMHSYKSEFKLLLTGTPLHNNTQELWSLLNFLD
                     EERFNDIQRFKDKFGVLSDAEQITELQAILHPLMLRRLKGDVEKNLAPLEEVIIECGM
                     TSHQRAYYQSIYSKNMEYLHRGAHSSNTTNLQNISMELRKVCNHPYLINGAEDQIIIE
                     RKAMMNIDPDVKPDLTFEYESLIRSSGKMILLDKLLAKLKANGHRVLLFSQMTKMLDI
                     IQDYLVYKGYKFERLDGSVKSEIRQGMIDKFNEEGSEDFIFLLCTKAGGLGINLTSAD
                     TVIIYDSDWNPQNDLQATARAHRIGQKKNVKVYRLLTAKSYERKMFDTAAIKLGLDQA
                     VLENTKDKPKNDDMEKLLRLGAYYAFEEDDGSAEKFNEEDIDTILSKSKTIKHEQVGS
                     AEGSTFSKLTFDLETDDIDVSAPDFWMKYMPQVKEDTILDDVPMAMRKRLQRESSMDS
                     SISAEELASMAVKMTSDDDDYNWSKKKLTTLQQCLTRYGWGRWNAIQKDFDPNCPLPT
                     LKAVCHCLVKLWINLLEEPDPLLQMIYDNGTNQETSRWEIKFMKLKRDDLASIASAGS
                     GNLQRIHRLNTMHFINMIVSACMNPPEGLEIGNVTAGKPADWWTEQDDRALVYGVFKN
                     GYGNYNEIQFSQTEELQQKSLNNRIKAIVNQKKLNLIKDGSGQAAMTTTKGWTRKEQK
                     AVVSSICNFGYPDPIKFMSKTETILKSPEQVDEFVNNLIKYCNEFKEEKDEPDASNLA
                     EKLTFYQAMRIRKRYELFKAAREFLSKCEEGKLTKSDRRILEIFCDKGYLASLEDEEM
                     KGLLGEDHSESKLTKKIQQMQRSGEPHSRNGILTLHSFAIPDYKKDKNGNPIFPIKVS
                     QNLIINSMGTVVWDRPAFHSERYLYPDGFETERLYQSCLDLDDKIWYKSSIHDTGDDT
                     PVFRVTVPNSDLVFEGAAPSKPWLLVIKAIEDLKREQGLAANRSMTISGPDQYGLTNN
                     LVMHLMRDMPGAEKCSRYIRPRADDEGDETSEEENKQKQEKPTRTSSRRKSRPSFAEL
                     SDDDEEEYEERESSDSEQEQDQKQQETENKPARKPLIKLAIKRSQEKLELKFDFTKLV
                     EAKEKNDASLVISTPSLLQENAISAPVPALADNRIEVAVKAMAESMN"
     gene            <25286..>25885
                     /locus_tag="TVAG_302850"
     mRNA            <25286..>25885
                     /locus_tag="TVAG_302850"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302850A"
     CDS             25286..25885
                     /locus_tag="TVAG_302850"
                     /note="encoded by transcript TVAG_302850A;
                     Probable pseudogene - evidence: frame shift"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93145.1"
                     /translation="MSDIDLEYDKLMPMYQDYHDTYTALYRLHTYDEDELLQIYQMVK
                     TNLIDKNVFMPYQILEQISKIFKYNNRYLKSYWFIFKKIYEEYKPEKIDNISTAFNYF
                     VYQEYGTILSFRKKPRFKYMDNLSINIHEENNIFSAIMYDDVKSFIGFTQNDNFNESQ
                     QLCTRYLYPHKKYQRQSDVYSFIEPYCYLYPQMDFFFFD"
     gene            <26715..>27023
                     /locus_tag="TVAG_302860"
     mRNA            <26715..>27023
                     /locus_tag="TVAG_302860"
                     /product="ankyrin repeat protein, putative"
                     /note="transcript TVAG_302860A"
     CDS             26715..27023
                     /locus_tag="TVAG_302860"
                     /note="encoded by transcript TVAG_302860A;
                     Probable pseudogene - evidence: frame shift Identical to:
                     TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="ankyrin repeat protein, putative"
                     /protein_id="EAX93146.1"
                     /translation="MAKDENGNTPLHIAAKYEHTQNNEIEYLIKHGANISAINKKGNT
                     PLIILMKRRNAKIKEIEYLIDNGADVKIANKSENTPLHIAAKNKRIKKLSLKNLFLLV
                     "
     gene            complement(<27875..>28690)
                     /locus_tag="TVAG_302870"
     mRNA            complement(<27875..>28690)
                     /locus_tag="TVAG_302870"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302870A"
     CDS             complement(27875..28690)
                     /locus_tag="TVAG_302870"
                     /note="encoded by transcript TVAG_302870A"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93147.1"
                     /translation="MKNFYIKSCYYYRSDDQAIDIYSPSSDTKILIESTYFKQCSTNA
                     NYPCVSVGDRGNFVQNRVCYVQCKGGDKGELISSQTDFYQLNFNKIFESTILYNGHNN
                     SNNPALYFCNGIIQISKVNISHNFNKVNSGYFMYNYHPESIINYTNIDNNTQTEGHVA
                     VHIETPFKLLTDIVLHIFSCNYIRNTGRSSIFYTEINGIISIEQSCIADNNVNHTFYI
                     QSGNVLLDSSYCDSNTTFNKNKPQIMNQLENYSEISNQFQLQSACEVKIDKII"
     gene            complement(<29554..>30132)
                     /locus_tag="TVAG_302880"
     mRNA            complement(<29554..>30132)
                     /locus_tag="TVAG_302880"
                     /product="DJ-1 family protein"
                     /note="transcript TVAG_302880A"
     CDS             complement(29554..30132)
                     /locus_tag="TVAG_302880"
                     /note="encoded by transcript TVAG_302880A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="DJ-1 family protein"
                     /protein_id="EAX93148.1"
                     /translation="MNMPKVIILAVPGVEPMEVVCPVDLLRRAGVDVKIAAACTNEIQ
                     VEASFGIKIVADVMFDSIKNETFDLVIAPGGMSGPDNLTNNQDTIEFIKRHDMAGKLV
                     AAICAASGYVLAKACGIMKGRKGCRYPGLDTPIEEAGGELTTDIVTRDGNVITSRGPG
                     TSLQFGIALVEALFSKEKAQEIAKNAILSNTI"
     gene            <30295..>31383
                     /locus_tag="TVAG_302890"
     mRNA            <30295..>31383
                     /locus_tag="TVAG_302890"
                     /product="DHHC zinc finger domain containing protein"
                     /note="transcript TVAG_302890A"
     CDS             30295..31383
                     /locus_tag="TVAG_302890"
                     /note="encoded by transcript TVAG_302890A;
                     Identical to: GlimmerHMM gene prediction Covered by:
                     TigrScan gene prediction"
                     /codon_start=1
                     /product="DHHC zinc finger domain containing protein"
                     /protein_id="EAX93149.1"
                     /translation="MHKNGFVGKTYRFITNIFPNFIRKVFCRCLPQNEENVRDGCIGP
                     GSPFKYSIAVFFYIIYIFFIIVYLGSVYPHISDIYSYPQFHRFFSIWVLPWTCVCFLI
                     FQIADPGVINAKNVNGYLKMYPFDDVMYRPNICPTQHIPIVSRSRYDRWTKRRIAVYD
                     HYCPWVCAPIGERTRRVFLAFLFFTVQASVYYTLGYFLTLRYLITTMNGWPEPNVTLF
                     DKVTNCITVCVSLWPYLSCAFFALFVIGLSLFIFMCIQVLTISRNETQIETAKLKYLR
                     KKKLIQKNPYNIGFIKNWKQVLFPPKIPLCDPYVPDIDENEILYITGLLLLPDEKNPD
                     IMTVQKSTWSLKPKESEKKDDDQKQKKE"
     gene            <31536..>32393
                     /locus_tag="TVAG_302900"
     mRNA            <31536..>32393
                     /locus_tag="TVAG_302900"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302900A"
     CDS             31536..32393
                     /locus_tag="TVAG_302900"
                     /note="encoded by transcript TVAG_302900A;
                     Identical to: GlimmerHMM gene prediction Covered by:
                     TigrScan gene prediction"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93150.1"
                     /translation="MNILLSFFLGVLFSLPVFVLFLLLLSFLTGKIIKKRRNTLRKEP
                     AFTVGTMCTVSWLNSIVQRVFLIAVTKKSLTFIIKSAIPKITEKTPLTSLEFNEIEIK
                     EVPPEISQAIITETKFSEFVTLKCFYKPEMVISALSTVSVSILPSFNLGIDAKLNQID
                     ADIALGIPESKGDAYIQMQNSTSVNFDVGASVKFVSINTEYLGPVWTSLREAVNYIIR
                     SIKIKIPLEQALTNEEEEEKEEEEAKEEEKKQLPRNDSTHEVIEIHPVPVKSDVKVII
                     DPIFKSYQL"
     gene            complement(<32820..>34961)
                     /locus_tag="TVAG_302910"
     mRNA            complement(<32820..>34961)
                     /locus_tag="TVAG_302910"
                     /product="Adenylate and Guanylate cyclase catalytic domain
                     containing protein"
                     /note="transcript TVAG_302910A"
     CDS             complement(32820..34961)
                     /locus_tag="TVAG_302910"
                     /note="encoded by transcript TVAG_302910A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="Adenylate and Guanylate cyclase catalytic domain
                     containing protein"
                     /protein_id="EAX93151.1"
                     /translation="MYDDINSKNKIFFWCIIGVAIFLLLVFVAIIAISWKRLNNDKTA
                     IYKTLMSLPKNVVSSINENLRQLQKNTDLGGTKTQQSEGERNKQEENLLKIFVTASDS
                     SGTVGDFAQLAIAFVFIMLCSIAYTTILFLLYEKIGTLIKENAPQANNMFGTASYITL
                     LALSVNQIIGVANGHPAVESDFILGLTTQANTVLQTMYVYYNKIRFGDGESLPFPHFE
                     TLATKAIENAGCNITKPPANLTEVLACYSPDIIVRYLSPLMHRIVDPINATSGLIKAS
                     DRQDVFWVLTAYRLFDDFFYPGAQQISSSLDSGINHEITFSGILTLVFIILILITIGV
                     IIYKLHMIDKKLRFTLGLLLSCNPSTVMQNSQIVSILTGNFSKTSTDTATRDAQFYKL
                     LVQDMQDSVIVTNQQFEIVSWNKASSAIFDVDFTKNNNFQQLLTSSEFSGDVTALFDA
                     TSKTGKTEIKYNHKNDTKVLNIQANSFGSNVVFTTQNVTQNFMYNKLIAEERAKSDTL
                     LASILPASLVPRVQRGEKNISFAVPSASVVFIDIVEFTPWCGSNDAKTVMGTLNIIFQ
                     YFDAIVNSQQVMQRMKCIGDCYMAAGGIFAEVSNAVQNAKEAVDFGLQALDAVERVDK
                     EQNQKLRIRVGVNVGGPLVAGVLGTEKPTFEIFGPVIVMAQQMEHNGVPMKVHISRAV
                     YELIYGGQYKIEERGEIQIKQGRVVTYLVSR"
     assembly_gap    35236..35335
                     /estimated_length=unknown
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <36830..>37354
                     /locus_tag="TVAG_302920"
     mRNA            <36830..>37354
                     /locus_tag="TVAG_302920"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302920A"
     CDS             36830..37354
                     /locus_tag="TVAG_302920"
                     /note="encoded by transcript TVAG_302920A"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93152.1"
                     /translation="MQPRTRIPEFAELENYKNLGLLTQMQLDLLYRRVNGESYQQIRN
                     VYSISKTTVARAIMRTATCRSWTKGQSGGGMTLLSLPDEMQFKKLVQEMADDLNCITT
                     SMAIAVCTELQNRRLKFAARVLIAARCPHLLAKLDDYFPSPSRGWLNHIATRLSIRIV
                     SSQTIDMLRRSTCR"
     gene            complement(<37555..>37875)
                     /locus_tag="TVAG_302930"
     mRNA            complement(<37555..>37875)
                     /locus_tag="TVAG_302930"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302930A"
     CDS             complement(37555..37875)
                     /locus_tag="TVAG_302930"
                     /note="encoded by transcript TVAG_302930A"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93153.1"
                     /translation="MTKTIEITNYNGHEFKNLFFVPRENTFYQIRGRKGKVSLSVYDY
                     KHNGKFIQAYDTNGKRVSLALSKLSNIYFDSDFDLYEEESESEDYELLCEAQQWEELQ
                     YFCK"
     repeat_region   37880..37914
                     /rpt_type=tandem
                     /rpt_unit_seq="taaaaa"
                     /satellite="microsatellite"
     gene            complement(<38093..>38620)
                     /locus_tag="TVAG_302940"
     mRNA            complement(<38093..>38620)
                     /locus_tag="TVAG_302940"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302940A"
     CDS             complement(38093..38620)
                     /locus_tag="TVAG_302940"
                     /note="encoded by transcript TVAG_302940A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93154.1"
                     /translation="MAAWAALGAMGTKALAFGAKALGAYDAVNKMSGGRVSKTLDANK
                     GKIGGWVAKKLRLNKIGLINKASNLVATESENALGKDDEFAKHAKDFNDQMKGETMHL
                     NRFNGTKENVSSPPVVLPYGPYGMYGNPYERPFDPLTGGSNWYHYGRRRKTVKLETDV
                     KKATKKKPRKRVIKQ"
     gene            <39057..>39449
                     /locus_tag="TVAG_302950"
     mRNA            <39057..>39449
                     /locus_tag="TVAG_302950"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302950A"
     CDS             39057..39449
                     /locus_tag="TVAG_302950"
                     /note="encoded by transcript TVAG_302950A"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93155.1"
                     /translation="MFSRDQIPPIDNLVSNPAEPSTVNVDGNIPRRSSIDIFESLYLN
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGKLSCFFVSSLYLKTLKFFNNMV
                     LPAGILLTCLISIAFSPPTYSTQCLGYS"
     assembly_gap    39189..39288
                     /estimated_length=unknown
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     repeat_region   39579..39968
                     /note="repeat family R325b"
     repeat_region   39984..40466
                     /note="repeat family R325b"
     gene            complement(<40463..>40864)
                     /locus_tag="TVAG_302960"
     mRNA            complement(<40463..>40864)
                     /locus_tag="TVAG_302960"
                     /product="hypothetical protein"
                     /note="transcript TVAG_302960A"
     CDS             complement(40463..40864)
                     /locus_tag="TVAG_302960"
                     /note="encoded by transcript TVAG_302960A"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAX93156.1"
                     /translation="MYEMNNILDKGLNVKLTNENIVEFTETGAVYKDVELLNKRAKGR
                     SRNMNKGWKPIKIYVNDGSGGSNIKYAESYRVYALKGEKPSFKNSYSNTYPQKLTDGE
                     VDDMNDSKNINRNGDRDAWNLFTISQLKVKL"
     repeat_region   40890..41504
                     /note="repeat family R325b"
     repeat_region   complement(41788..42213)
                     /note="repeat family R25b"
     repeat_region   42305..42832
                     /note="repeat family R131d"
     repeat_region   42837..44022
                     /note="repeat family R410a"
CONTIG      join(AAHC03006890.1:1..3478,gap(unk100),AAHC03018472.1:1..1495,
            gap(unk100),AAHC03000816.1:1..30062,gap(unk100),
            AAHC03006269.1:1..3853,gap(unk100),AAHC03005116.1:1..4770)
//