LOCUS       DS113599               75367 bp    DNA     linear   CON 15-DEC-2022
DEFINITION  Trichomonas vaginalis G3 strain G3; ATCC PRA-98 unplaced genomic
            scaffold 1047229021116, whole genome shotgun sequence.
ACCESSION   DS113599 AAHC03000000
VERSION     DS113599.1
DBLINK      BioProject: PRJNA16084
            BioSample: SAMN02953626
KEYWORDS    WGS.
SOURCE      Trichomonas vaginalis G3
  ORGANISM  Trichomonas vaginalis G3
            Eukaryota; Metamonada; Parabasalia; Trichomonadida;
            Trichomonadidae; Trichomonas.
REFERENCE   1  (bases 1 to 75367)
  AUTHORS   Carlton,J.M., Hirt,R.P., Silva,J.C., Delcher,A.L., Schatz,M.,
            Zhao,Q., Wortman,J.R., Bidwell,S.L., Alsmark,U.C., Besteiro,S.,
            Sicheritz-Ponten,T., Noel,C.J., Dacks,J.B., Foster,P.G.,
            Simillion,C., Van de Peer,Y., Miranda-Saavedra,D., Barton,G.J.,
            Westrop,G.D., Muller,S., Dessi,D., Fiori,P.L., Ren,Q., Paulsen,I.,
            Zhang,H., Bastida-Corcuera,F.D., Simoes-Barbosa,A., Brown,M.T.,
            Hayes,R.D., Mukherjee,M., Okumura,C.Y., Schneider,R., Smith,A.J.,
            Vanacova,S., Villalvazo,M., Haas,B.J., Pertea,M., Feldblyum,T.V.,
            Utterback,T.R., Shu,C.L., Osoegawa,K., de Jong,P.J., Hrdy,I.,
            Horvathova,L., Zubacova,Z., Dolezal,P., Malik,S.B., Logsdon,J.M.
            Jr., Henze,K., Gupta,A., Wang,C.C., Dunne,R.L., Upcroft,J.A.,
            Upcroft,P., White,O., Salzberg,S.L., Tang,P., Chiu,C.H., Lee,Y.S.,
            Embley,T.M., Coombs,G.H., Mottram,J.C., Tachezy,J.,
            Fraser-Liggett,C.M. and Johnson,P.J.
  TITLE     Draft genome sequence of the sexually transmitted pathogen
            Trichomonas vaginalis
  JOURNAL   Science 315 (5809), 207-212 (2007)
   PUBMED   17218520
REFERENCE   2  (bases 1 to 75367)
  AUTHORS   Carlton,J., Miller,J., Delcher,A.L., Schatz,M., Schobel,S. and
            Fraser,C.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAY-2005) The Institute for Genomic Research, 9712
            Medical Center Drive, Rockville, MD 20850, USA
FEATURES             Location/Qualifiers
     source          1..75367
                     /organism="Trichomonas vaginalis G3"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1047229021116"
                     /strain="G3; ATCC PRA-98"
                     /db_xref="ATCC:PRA-98"
                     /db_xref="taxon:412133"
                     /chromosome="Unknown"
     assembly_gap    2739..2838
                     /estimated_length=unknown
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<3644..>4582)
                     /locus_tag="TVAG_317630"
     mRNA            complement(<3644..>4582)
                     /locus_tag="TVAG_317630"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317630A"
     CDS             complement(3644..4582)
                     /locus_tag="TVAG_317630"
                     /note="encoded by transcript TVAG_317630A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00478.1"
                     /translation="MISTIGTTTIQTTAPNSLVMNPTSMLVEMKSFIPSSYTFETEIQ
                     KIKQELLTSNLDCTAQDEENEQYLYEMQDIIDHLPKLPEIQQQKRTIPEFDEIEVKPT
                     DSVEIKKFIRKVNYEFLGFHCNHKVMDKDCDMVYKNVSDIYKSEEFKTYDNFVSLVAE
                     CVWEIRDKDRRGKVWNKQIRPAMFEMKRAIDALVVLAGFISMYNAKMNPQCSKCKAAI
                     RKYNYSVKEIERMRNDYADLKKEAEKPVENKMNMLAFLNKNYPTADDFLLSDVKKKYK
                     ETFGIVKTFDVLKEEIEATKLFKVMNHRNIYHVKRL"
     repeat_region   6217..6591
                     /note="repeat family R23a"
     repeat_region   complement(6730..7590)
                     /note="repeat family R321a"
     repeat_region   complement(8394..8978)
                     /note="repeat family R31b"
     assembly_gap    9086..9185
                     /estimated_length=unknown
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     repeat_region   complement(9211..9612)
                     /note="repeat family R31b"
     mobile_element  9630..10589
                     /mobile_element_type="transposon:transposon-like, repeat
                     family R11b"
     repeat_region   complement(10586..11917)
                     /note="repeat family R131d"
     gene            <11990..>12838
                     /locus_tag="TVAG_317640"
     mRNA            <11990..>12838
                     /locus_tag="TVAG_317640"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317640A"
     CDS             11990..12838
                     /locus_tag="TVAG_317640"
                     /note="encoded by transcript TVAG_317640A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00479.1"
                     /translation="MLPIEKENSRVATTKPLDELFTNVGQKFETDTVKHEGYRFDYPL
                     RWLRDPSVTKAIGFRRMKFISEAIHGFPFTVGFEVRYYNKEKRMYEKFEQGKLLQVSL
                     LVNLETTLQAFQEKINDIYIEYANQYNIDEGEYHLDIIYDRKNATVKINKIEDLGENV
                     YISTKYNNLAWYRFMRMLNQPAAYPVHPDFYEVENPNGTYENVFDPAAIIVHASFSGA
                     QNSFLCLANDFYEKPTKLYEPPSGSISDFQVWFTTDGRKRIIPLYHAFYLELSFIYNY
                     YRTVKI"
     gene            complement(<12843..>13085)
                     /locus_tag="TVAG_317650"
     mRNA            complement(<12843..>13085)
                     /locus_tag="TVAG_317650"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317650A"
     CDS             complement(12843..13085)
                     /locus_tag="TVAG_317650"
                     /note="encoded by transcript TVAG_317650A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00480.1"
                     /translation="MGFFSSIGNFFRNVGRGIWNGIKSVGKGIWNGVKNIGKRVGQFV
                     GIIPKDPEPEEQAPVIQQPEPAPQSSWQPNPTPQPY"
     gene            complement(<13104..>13466)
                     /locus_tag="TVAG_317660"
     mRNA            complement(<13104..>13466)
                     /locus_tag="TVAG_317660"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317660A"
     CDS             complement(13104..13466)
                     /locus_tag="TVAG_317660"
                     /note="encoded by transcript TVAG_317660A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00481.1"
                     /translation="MDAQNLANAQQPGQPNPENIPNEVRIQTAMANYGQVPTDVQMQT
                     AMSNDAALGLPPWYANMRWKEFYTNPEVGYKQLYADDANTGVDPEYVFYQRRNRMYEL
                     QLKNAMELNRKRKRLGGH"
     gene            complement(<15492..>16658)
                     /locus_tag="TVAG_317670"
     mRNA            complement(<15492..>16658)
                     /locus_tag="TVAG_317670"
                     /product="CAMK family protein kinase"
                     /note="transcript TVAG_317670A"
     CDS             complement(15492..16658)
                     /locus_tag="TVAG_317670"
                     /note="encoded by transcript TVAG_317670A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="CAMK family protein kinase"
                     /protein_id="EAY00482.1"
                     /translation="MEPEIMLNYSVQFNIGSGTFAQVFLAIHNKTGTKVAIKVISKLN
                     CIDNERNQLLMRREIDIMKKLKHPFVCDLYEVVETEKNVYIVMEFAQNGTLLETIKSR
                     GSLGEEDASIIFAQLLIVMKYLHNECKIAHRDIKAENIVFDSNRNIRIIDFGLSNSPD
                     SNNIMQTQCGSVSYASPEMIMGQKYTYASDVWSLGILLYGMVCGHLPFQDTNYSRLAQ
                     KIVFKEVDYPSQLSSECIDLLKRILKKNQADRIPLNEIEKHPWISERYNSILNSVTEF
                     HYNYDYISKRMQSYNLDLEQIQKGISDGVTDQDTITYNIICRENQIREFHQSMLNIYK
                     LARKYSVKSNEKLPPLNPKDHTNSFKPRRAVIPVNAPVLSAKRKKMPSSLVFSN"
     gene            complement(<19560..>20612)
                     /locus_tag="TVAG_317680"
     mRNA            complement(<19560..>20612)
                     /locus_tag="TVAG_317680"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317680A"
     CDS             complement(19560..20612)
                     /locus_tag="TVAG_317680"
                     /note="encoded by transcript TVAG_317680A;
                     Identical to: GlimmerHMM gene prediction Covered by:
                     TigrScan gene prediction"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00483.1"
                     /translation="MKAVKIEIQSGTTNISFYKDLLTNKTKMKHCICHGMKKIYSFGK
                     NSIEIQVLKSEMNKYALSAKNIKYIDDTEDIYVALDVNNDWNLNSKQIDLCLMTKKNY
                     PQIGKKNENRLPVYSMDITAGRNMNGPSYNPNSFGSNIRGMNEEYMFMISDLPIQVQE
                     HFKNEIADEIKKSLKIDQISYQNGNWIVDKSLETTIKDAFRINRLRIPDLSRLYMSLD
                     QFNISHHDIKMKLFDHVKIEGNFVFIDNEDQKFMSDEDMRAFLEDERLVNQNTQFFQY
                     KLIDLNENIMTKKYDAFKMRRILEEMYDNKNMKDLPKKLTEMGINVSILGFFYWMFSC
                     DETKYVAEKILKDLPK"
     gene            complement(<22555..>24600)
                     /locus_tag="TVAG_317690"
     mRNA            complement(<22555..>24600)
                     /locus_tag="TVAG_317690"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317690A"
     CDS             complement(22555..24600)
                     /locus_tag="TVAG_317690"
                     /note="encoded by transcript TVAG_317690A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00484.1"
                     /translation="MTKYVDPNFLPSLLDTALNETKECGYLYALKMQQIQEIYKENSD
                     LDHQIEQISMKIQNEKGFMDNSESIIQNLQKECENLQKENDDKKEELFKSIMDNCTYE
                     TYQGEYPFKYLNGVEGATPLVFGNILKSFLLAQKTKLFRLYDTHRKLTQNVFCLVDED
                     PENYKISENLDFPQNLRYSVTNKFEDAISQSEIPDYIPESNYSKSIISQIDIPQMNQS
                     NNGVEFEVINMFNTDSKRNYLVDTYIHKLRDRSQKSHEKVLSLLNDIEKLPVPDVDYS
                     NPTLKSPSFTHDTANTIKDAQNAINRFATVISMGHISQIETENAIHEQLTDLVDSIKS
                     ANKNLSNFFHQGKIQPINTNNEQKETSVHVIPPSQVEKTFDLAESADEVLREVSTQQN
                     LMIENMVSIQNQLRENEVRAKSTPISSSSSIDISDIIKLQDEIVQKQNEEFNEISEIF
                     ELLPQNIKDSLKNIPFPGKESLENNSEPNLDLDFEIPKLTPKYKPKQSSNSDLLATVR
                     SRKYLYYSRPEDLQIQQRVVEEENKIQKIYDDWLAKNFTYDEAKDPIAIAAELNGLKE
                     QLQQKEELLSKRKQQNAINEDKNKTNVPKREQLQKSIGDLQKEINVYEKGLKTADDKS
                     AKFRDLIREMTKKISETKLKIDKKEKAQKVINELTNKINSIDDYIKEQKQKIKEGAN"
     gene            <26072..>26908
                     /locus_tag="TVAG_317700"
     mRNA            <26072..>26908
                     /locus_tag="TVAG_317700"
                     /product="CAMK family protein kinase"
                     /note="transcript TVAG_317700A"
     CDS             26072..26908
                     /locus_tag="TVAG_317700"
                     /note="encoded by transcript TVAG_317700A;
                     Probable pseudogene - evidence: point mutation Identical
                     to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="CAMK family protein kinase"
                     /protein_id="EAY00485.1"
                     /translation="MEYCSRGELFSYLLQNGVLADFQIKHMLSQLVNALVYLHGRNIA
                     HRDIKPENILIDQDLNVKLADFCLCHSTSNQQMLLTPCGSPFYAPPEIISNIPYDGKK
                     GDMWSLGVVVFTMATGALPWTETNQTQLLQQIVNADYVVPVTVSPNIRHLIQALMDPN
                     PSKRPSAEEVKSLPWMQENFDYPFGKPKLSAKVLEKSFNSRASYGYNTPASATVNKKS
                     LIVRPTVPAGKARTICTVELSPMIDIVRKVRVRDKFAKRHFFNNLKLRFPNFLKITLN
                     YI"
     gene            <28592..29347
                     /locus_tag="TVAG_317710"
     mRNA            <28592..29347
                     /locus_tag="TVAG_317710"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317710A"
     CDS             28592..29191
                     /locus_tag="TVAG_317710"
                     /note="encoded by transcript TVAG_317710A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00486.1"
                     /translation="MNPIEINAEGNFEHDGLFEIMNTFNSLTKFITQGSPLEYPVLYA
                     HALQQKYKVFNEYEHEIEEFFIKVRISILCCKHPNSIALYSLRFNYFLDLFIDNLSKD
                     NADFFEEKLPSLYILEHAPTEDMPPIETDEIIPADITLNTLTISQVGAFTLSQDQNLI
                     PSFTTFSGTARSSTRQDNMTTNSRQDAGNTNSKQVFVNK"
     gene            <29404..>30015
                     /locus_tag="TVAG_317720"
     mRNA            <29404..>30015
                     /locus_tag="TVAG_317720"
                     /product="MGC81471 protein, putative"
                     /note="transcript TVAG_317720A"
     CDS             29404..30015
                     /locus_tag="TVAG_317720"
                     /note="encoded by transcript TVAG_317720A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="MGC81471 protein, putative"
                     /protein_id="EAY00487.1"
                     /translation="MSSQLNTVHLEQIISYLQFADKMRKHILSEVKEEIADHVDSRVD
                     DSETYTGSEICDALEDLPDLLDTMLDRELEHQRDVSVFLIQKIFEQYRQLDMEISLKV
                     PMLENEKDIKSSHALCEDLTTKPAETLKSAPLPPKDAKRVGEKLKEMKSQSKSKDPKS
                     ILEENLRLKKQIQDEMNAFPQYKKLQEMIHEREIELNGLKACL"
     gene            complement(<30338..>31423)
                     /locus_tag="TVAG_317730"
     mRNA            complement(<30338..>31423)
                     /locus_tag="TVAG_317730"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317730A"
     CDS             complement(30338..31423)
                     /locus_tag="TVAG_317730"
                     /note="encoded by transcript TVAG_317730A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00488.1"
                     /translation="MDIRKFDVFPKLANEYRIGTISGGILSLISVFAAIVLCFYEVAA
                     YLNAPTRQFLFVDTRRPTGPDGVTIDQNSQPRLDVKVSVTFPKAPCFLIHLDVIDSVT
                     QLAMPLENINSKFMRLDSQGKPIEALDLSTLVNTTVQEKCGSCYNAKDPKRICCRSCQ
                     EVFDAYRDAAFKPPVLTEIEQCKPVAEKVAKMEGEGCKVDASFKALRVASEMHIAPGY
                     SWNSEGWHVHDLSLFTKEFASLNLTHTIHYLSFSEKEGDYPLNNLNNVQTENGAWRVV
                     YTADILEGNYSASKYQMYNPKSFASGLFFKYDVSPISAVTYTDSEPVFHLLTRILTVL
                     GGVLGLCRLIDAITFHTRRMKRTEEIK"
     gene            complement(<31864..>33810)
                     /locus_tag="TVAG_317740"
     mRNA            complement(<31864..>33810)
                     /locus_tag="TVAG_317740"
                     /product="surface antigen BspA-like"
                     /note="transcript TVAG_317740A"
     CDS             complement(31864..33810)
                     /locus_tag="TVAG_317740"
                     /note="encoded by transcript TVAG_317740A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="surface antigen BspA-like"
                     /protein_id="EAY00489.1"
                     /translation="MLICFLLSQRNISKFQYRPGSNDEVIVNCIGSEGDVVIPKTVKE
                     IADGPWSFFECIGTITSITFQDDSEIISIDSNSFYSLEIELANLSNCNKLAFLNSSLF
                     YNCINLKTVILPNNISSIGNSCFGVDSSLQSISFPESLVEIKEYAFSGCGFTSITIPG
                     KIRIGNGVYSNCKSLINITILGNISYISKTFFSRCDSLTNIIIFGNVNVIEEDGFSNS
                     KLLTNVTILGNVSYIGQQAFYNCKSLTNVRFKGGLKYIGYDAFFNCTNLTSISNIDCS
                     TTISDSAFYACINLESISITGDNISIGSQSFESCTILSNITIIGDNISIGEAAFRSCT
                     NLSSVTITGGNISIGLYAFYQCANLISFEIQGNLTLLPEATFYKCEKLVSIVLPESLK
                     FIGTSVFACCTNLQNIIFPRNLTYLGRYTFLSCKSLKSIILPESVTVIGSGLFQYCTN
                     LATIIMPDGLKSIEYSAFSECTGLTSIPFPGSLTSIEHKAFRKCTGLTTISFPGSLAS
                     IEHEAFSECASLTTISFPGNITTIGESAFSSCPKLKIITFQSNTNTISFYSNPFSDNI
                     LNFSIQTVLTNSSKDFFGEKSVYVHYKNITELTDQTTIDVLQYIAIEHIINPLDALTE
                     NVNDPIVYESDYSFLSILLIGLYS"
     gene            complement(<34546..>35826)
                     /locus_tag="TVAG_317750"
     mRNA            complement(<34546..>35826)
                     /locus_tag="TVAG_317750"
                     /product="Myb-like DNA-binding domain containing protein"
                     /note="transcript TVAG_317750A"
     CDS             complement(34546..35826)
                     /locus_tag="TVAG_317750"
                     /note="encoded by transcript TVAG_317750A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="Myb-like DNA-binding domain containing protein"
                     /protein_id="EAY00490.1"
                     /translation="MDTFSETEFITDVYSSPVGSHPSAEQKEWSIQVEKFVDEEFQAS
                     KKKATKKQKNEQKSKKGHLENEEEIALWSPAKKQSWEARKTNPNAYYYRHVDPGVVKR
                     TGAWDDEEKELFMKAIKLHPPTQGKWGLFAMHIPGRVGYQCRNFYHRLLETGELHEDC
                     TIGEPAPQKPKKQVTKKKSSTKKKIVEPESEDDDQDEDIIGEDELLQEEEIIQPPKPE
                     PKVFQIRSLKLFSTRVLQEDERLKSEAEEAAREAISSFKSEEENQTPTEIKEENEFQY
                     GVVEDKEATCEEIVEAAAESVERAMPEVLRWESKLDASIKASEIPQKNFDEEIINLNQ
                     KDISNESRFASIMRLNSRCPMNLLLFSFPAPLNKKDEYIKAVKDRLSTNTEMKTFNVA
                     IREYFAAKDSSMRNPESRDQICEDFVSRFIRNEI"
     gene            <37005..>37385
                     /locus_tag="TVAG_317760"
     mRNA            <37005..>37385
                     /locus_tag="TVAG_317760"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317760A"
     CDS             37005..37385
                     /locus_tag="TVAG_317760"
                     /note="encoded by transcript TVAG_317760A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00491.1"
                     /translation="MLSLLFSVSLSAKWDRTVFQDGTCPSTSTFEINDVYFENLDAES
                     QNGGAITIRGCTGTLKMNVVTFIHCISRSTGGAIFIESNPYNVDATKVCVSKCSSTQN
                     CQYAQFTSSQGTFTHTYFNIFLFE"
     gene            <37483..>39006
                     /locus_tag="TVAG_317770"
     mRNA            <37483..>39006
                     /locus_tag="TVAG_317770"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317770A"
     CDS             37483..39006
                     /locus_tag="TVAG_317770"
                     /note="encoded by transcript TVAG_317770A;
                     Identical to: GlimmerHMM gene prediction Covered by:
                     TigrScan gene prediction"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00492.1"
                     /translation="MMENSPTIRYLNFHACPCYNGFTIGASLQLSYAKFVDNNIYNRY
                     FMYLSGISTFQYCFFKNNNGFIKHSQSLSITDCYFDNFQVDGPGLSFTRVQTSGEVFP
                     TNFEVYSNGNCIAVPYVGEQPPAPEIPPATPPPTRSPAPTQWPMPTATPVPPASTTPD
                     KNFEYQIYSERQNVTEQSRIIVHDCVFNNIKLGLSITGNNLYVRLEMWETTFYKCSNQ
                     YGNDQSPAGFLFYPQFSGSNEFVSCLVNRTCGYELTAHHSIFAYVKVTPTSYNHANLT
                     SITRCAPDPGGSNAEGRYNTVDLRSGKHVFNSWNSSNCQVTDTAGIFTVGDGQGGTKS
                     QILYATFYNNYATGSMVLNCLNTDIVYSHLNIIKDRSDKAALFLAVSSTFLLESSIVL
                     DCQMKDNKMMSFQSLINPSSSSSSTATIKSCFLQSNIDTSGCTVIDTVRQSTETYKLT
                     HFANFICEVEVSAKPLAPQPTFMTRCMRFDVSEANKKFLKMKKTKVGMAFAEATLSV"
     gene            <39650..>40801
                     /locus_tag="TVAG_317780"
     mRNA            <39650..>40801
                     /locus_tag="TVAG_317780"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317780A"
     CDS             39650..40801
                     /locus_tag="TVAG_317780"
                     /note="encoded by transcript TVAG_317780A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00493.1"
                     /translation="MNSVEEIDELRRIDILTAKRDSLDKSINEANHALSLLETMQENL
                     SSQHSALNLEIDELEITNQKYLDSTNKVPHYKDSHKTLEFFDQLKILEAETEYIDATL
                     EARRKNINDLKSHLSASNSQLKRLETQISELNDTLEKTQKTEHERESAIKILKQKIFD
                     ADDEYNRTQDICENLKVEIQNQADEMKEISPEAMELLVLQKDTLIEEVRKGQEEVNKL
                     EARSKQNQSKYAAQDNFQQKKLDKEASPLVWMSERNSLLIKIKKAQQELAQLNQRDRS
                     ANKTREKTSQLAEESQYSEDDVKKALYLELQEIMNQQDTFMEDAIETETNYREELKNQ
                     IKEIDQTADSINSFKDGALDLMKQHNTIASGKDRLELLRQELHDLKSKL"
     gene            complement(<40991..>41407)
                     /locus_tag="TVAG_317790"
     mRNA            complement(<40991..>41407)
                     /locus_tag="TVAG_317790"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317790A"
     CDS             complement(40991..41407)
                     /locus_tag="TVAG_317790"
                     /note="encoded by transcript TVAG_317790A"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00494.1"
                     /translation="MNPIEVSTKGTFDIMNTFNSLTKFIMQGSPLEYPVLYAHALQQK
                     YEDFNEYEQEIEEFFIKVRISILCCKHPNSIALYSLRFNYFLDLFIDNLSEDNADFFE
                     EKLPSLYILEHAPTEDMPPIETEEIIPTNITIDSYN"
     gene            complement(41538..>43363)
                     /locus_tag="TVAG_317800"
     mRNA            complement(41538..>43363)
                     /locus_tag="TVAG_317800"
                     /product="3'-5' exonuclease family protein"
                     /note="transcript TVAG_317800A"
     CDS             complement(41546..43363)
                     /locus_tag="TVAG_317800"
                     /note="encoded by transcript TVAG_317800A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="3'-5' exonuclease family protein"
                     /protein_id="EAY00495.1"
                     /translation="MLPRISFGPDSQQLDDLINVFWEEGETKLVDFFENTPVSVTVIS
                     SESDKLSECFNQFDDGNVICIDLEWKPNRNDQAHPISLFQFCSSKGVLIVPNSLEDGT
                     DSLHNFLQAHTFYAKGISQDKKKLRQMFDETFDIIDIEKYYLTPNNLPLNFEQMITTL
                     VGEPSAQFKDKKMTTSDWTKRPLSVKQILYAAFDVYGLFLAVKSLKMKYKSQKIVQPP
                     KQKSKKDRKRKDKTEKVKKEPTPKSYRPVFTTDVAYRGSEIFDKSIIRKEKIYEPTKE
                     FGPKQTMLNHYLATGEVTNNFCHICQKEFDDIKSHVWDFHGEIIPNLYFPCQTPSYLK
                     RVIHEIILGLSVFKEVEENNWECQICHRKLNTIHIAFTHARLEHAKMIKQMPDMKLKD
                     IVYSYYKMEKRIREENDHFYFDSTEFDNEEELKDYAWTNHGTILSSMWKHSPTCYNDE
                     DIYSDEVMNLGIDCANKLKFGEVNHGILSCFDCGIGFDSPCELFVHLFHKHTQIFALQ
                     KEDIPEDYPLICYKIPGEFNRILMRFTLDNAIEELVNAMVLERKSENQYDLKCADCNV
                     DMNDENSTWEHLSHHHLVCVFRKSKVMNFSSSDEENANE"
     gene            <43480..>43860
                     /locus_tag="TVAG_317810"
     mRNA            <43480..>43860
                     /locus_tag="TVAG_317810"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317810A"
     CDS             43480..43860
                     /locus_tag="TVAG_317810"
                     /note="encoded by transcript TVAG_317810A"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00496.1"
                     /translation="MPEVLRWESKLDASIKASEIPQKNFDEEIINLNQKDISNESRFA
                     SIMRLNSRCPMNLLLFSFPAPLNKKDEYIKAVKDRLSTNTEMKTFNVAIREYFAAKDS
                     SMRNPESRDQICEDFVSRFIRNEI"
     gene            <45199..>46716
                     /locus_tag="TVAG_317820"
     mRNA            <45199..>46716
                     /locus_tag="TVAG_317820"
                     /product="surface antigen BspA-like"
                     /note="transcript TVAG_317820A"
     CDS             45199..46716
                     /locus_tag="TVAG_317820"
                     /note="encoded by transcript TVAG_317820A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="surface antigen BspA-like"
                     /protein_id="EAY00497.1"
                     /translation="MFRGCDSLTNIAIYGDIDTIRPSTFYENARKISNVTILGKVRYI
                     DFLAFYRCYSLTSFKFNGGLEYIGSAAFKNCSKLTSFSNSDCLNIIADEAFYGCINLE
                     SITIAGDNISIADKAFFECSNLASITITGNLTYIGEYAFERCSNIASITITGNLTYID
                     SCAFDGCSNLTSITITSNLTHIGEFAFRRCINLPNVAIPGSLTSLEKGIFLQCWRLVS
                     IALPECLVSIENSVFSFCEKLSNITIPRNVTWIVGYAFNDCKSLISITLPEGINVVSY
                     GLFDGCINLTTINIPHRTTYIEFEAFANCISLTKIEFPRNLTTIYEKAFNGCVSLTSL
                     IFPESLTSIRYQAFGGCTSLTSITLPGSLTLIEYDAFSSCPKLKSITFQNNTNTISFG
                     TNIFSDNILNIYIQGMFIANQSSRNRIQPNSHLYVTDQTVLTNTSKEFFGVKSVYVHY
                     KNITELTDQMTIDVLQYIAIEHRIDPFVFPQTVNDPIIYESDYSFLSILLIGLYS"
     gene            <49778..>50974
                     /locus_tag="TVAG_317830"
     mRNA            <49778..>50974
                     /locus_tag="TVAG_317830"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317830A"
     CDS             49778..50974
                     /locus_tag="TVAG_317830"
                     /note="encoded by transcript TVAG_317830A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00498.1"
                     /translation="MQTTTTTTDPIRKRFDSDSEARFLLTPGQSITLSVDSGSVFYNG
                     WQLPETGQVVFRDKDFTLMSYKDSYTLKFMGKLPRFYAAKRIPQESVPAYDLISQKSV
                     VAVCGPPLSGKTTACQTIINSALHGVPQHPKEKPIPIYVNLDPAQAPFCPPGSIGALP
                     ITKPIDNTGFKIENPLTYFFGHTEIDEAHRDRYTDLVHELATYVKQRRQAISQSDGGV
                     VIDLPSPTNEHVLPGIAQAIKDFEVTHIVCIGDDRLVATFQRSFPWISVWGMPALGAA
                     HDDEISIRTAQRSLDTKRYFDGDDSADLVSMTYRFTNRDDFKLYKVDKREPEEVPIST
                     SLMASVVAIVQRPHVSNELWKQNVLGYLTITKVQNEDNIEVLKPKQPLPNNVQFIIGS
                     IKYFIK"
     gene            <51467..>58570
                     /locus_tag="TVAG_317840"
     mRNA            <51467..>58570
                     /locus_tag="TVAG_317840"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317840A"
     CDS             51467..58570
                     /locus_tag="TVAG_317840"
                     /note="encoded by transcript TVAG_317840A;
                     Identical to: GlimmerHMM gene prediction Covered by:
                     TigrScan gene prediction"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00499.1"
                     /translation="MSITISPETVFSPHYLSLLTEHPHLAYPDPESTQVFNLVDNVLS
                     LQKFDGTQDSHMNDYNKILDLSISKMNSILEASKTFETFFVTLEEQIKSYVHQIVSSY
                     IESQTYMTEESVASSTDQSKSLDQVFIKIRFLLDLILGMREGCDTFIVASEHAFFVKN
                     NFLFTFIPEKFSREKQLPSDYMICGVGSTIYVVSNSNNSLLQIETSSINSEETFTLKE
                     LLGNDIPVICIGDKNGNLALIQKINGKIVQNILTLDQQNKNMQTELYESTMNDSKFYF
                     RDGKLYEVGDKTFIDGILSEEKPIYPIYAEKTSSFFIEDGKILYQKYPGENKSEIIDS
                     LLTLIKPFPTTKDKFINPLLHDKKVNYLQFTQNITSTSRLILYIMERVNVLPQEHRIG
                     LVAGLMTILTINLRHFAFQNVEPSTMNEIYNIYKHFSQYSTSLSISILQWMSVIPSTI
                     YSDTFIVNQILRPAFSYVYMNKEYSAIKDFVLKKPQSLILVSEDLISQLPDQEGILLI
                     IKTIDYLPICYEAMNAVESCAEYVSIVLKTISKLLDRKMIYNANRYFQHLVYSLSTLN
                     NSHQIAEVFIKDSMKNLIKLSKEVEKTEISDTCDKNFTGLESVYTKQKDFFEVYHLVD
                     DIQLTIDAGKIRNLKVTVSDELETNSTLILNGTKYTVQNGLVVEIFSSIINLSYIDRC
                     DEQHEVILTVQGSRMEPQPEDNLEPSLTSINYVAKTIGSFIDQLLNSNTISRLEYDNR
                     HLIGNSFIREFESFSKNSENVNYFEKKDDKMQKFLDFMDKISGINMQIKKRVRNFDEL
                     LEKVLSVYIFQLNAKEEVEKLINEQELTKDKVSHKLRHTWTCVSGLRRELLSLKQKEI
                     AETNKNKYSLQDFIQNITEKCQFLTSSKLSLNQSDEDVVKYLNDLFVNYIPVQDIMKI
                     AKEQNKRLSLRKISLDVISEFINNSSVFRKSTIETFLINIKVSFSIITDERSSLIGKF
                     SLYNSLLESLENCIESFYSAMVELKSDCMYISFMKFFCKCPSIVQKFTQGIIYILTNS
                     SKKFLKYAESVLVSLSNEPIVIETINNGALEIDDEDYRATAFFILSLSENAKVPYEIL
                     FSKKKSQKCEVASLLLAGKLLVKDKEGEAVLRANLDNLVEELSQTMTGEDNRFSVCAE
                     IISFFRFLLLPFSVHKDFILEYLHSLFVTKTMIFTNKIIATFLILGHPLFRAEDTGVV
                     YNSSMIRILYNDVKKEEIDNVYPMVRISIDPNTFTLTPSEVSVVVGLQEKINGIVAQN
                     KPVSLHKANDIEIFYCFLATALQNPQNAEQFKPHAAKMLKYCELNAITRKGISPAKLM
                     NRLAETLYTLSLFPEISSPSATSWIDYKFISMTTGIVHKNHLDSASVGISLFVGERKI
                     QKNHTFSYRIVFDKPGTASIGFIDANSIPTEIKFYGLTKNFNKYSNVTASLSPNSICV
                     SDLDKSYISEFLTGDMLPAIITINCRVKMSYSMSNNSVIYNPPVTPESPLFDDHIPHR
                     VIESNLGSYDERIQTFNMKVVGEKVRTKNGIIGEIDSISSRSDPKLNIRISNRDGSNE
                     IVTIQAKNAEVIPEKIHTLVSRAKRKSRDDKNQDFVYRNNYIRKYNRMVGKLMLLCLR
                     SIIPLISSNIPLSTLETIMDYALPFTFGVSNQKSTKVTKFTSPYITNINYRFPGDREF
                     LSNFVQKELQKYNVQDIINYIVQKISAKQSTSSNCVYHISFYAMRTITVPISLKEDEA
                     VIFPLEFNSQENVGATIPNGNYRFRNQYHIQYICVPKYLPETDIMSSIVVLHFVSSFI
                     DVSKDKITFDDIHNMATSILNQMPNNNAIINSMRLFIEKNTELACYNKKYIPSVLEEI
                     RSLDTNDLGIISFLANLKQKIIYSLDIESEDFEHLAREICAEVTKVDKQINEFMLVKA
                     FQKFSLPTDRFNIIALNYVVDQFTSLKQIYKIALESNNNYDCDVDINLYEEVSEPIKD
                     DALKEIRRKMLIRFMSVETSQYSQFFDVDYFRSHDIHLSIKSLPNRYQIFVSFNRFSA
                     FKFFEGGDSGKSLMQQFASQYTDYSCLAVIGAQPWRITLYGENAIDAGGPGRELFSQV
                     CEEILKPQMKLFCLTPNAKSFHEEEYLPCIPNGLSTCAGAFIAACATSMLPFQFKICT
                     PFWRSMTGKPITIHDVYSIYNDFAMLVLKLQHANYESEEEFITNYKLNFVIQDLYGNQ
                     MEIIPNGKQIKVTLGNLQIFITTAQEKLVEQLNNAIDAFKEGFYQVLPQNLCATITTD
                     SLVQACCGIDFIPDSTFLNYFNMDLNSTILRQSLIQLTQEERFGLLKFASGSRNPKAK
                     IHVHFDRSKNSGLPTATTCILAMTVPMYKSVQVCTKSLRAAIQFSSVITDSDFDIRMF
                     NFT"
     gene            complement(<60463..>63492)
                     /locus_tag="TVAG_317850"
     mRNA            complement(<60463..>63492)
                     /locus_tag="TVAG_317850"
                     /product="SacI homology domain containing protein"
                     /note="transcript TVAG_317850A"
     CDS             complement(60463..63492)
                     /locus_tag="TVAG_317850"
                     /note="encoded by transcript TVAG_317850A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="SacI homology domain containing protein"
                     /protein_id="EAY00500.1"
                     /translation="MTIHPLADIPSYLGIPNIDVFQNFSEAMKNITTIFKSKIIADGI
                     ALVGMVKEEDQIIFSIIKEQTYQCDLPGKIPINVVKTAQFISIIGNKFSYETQFNEFP
                     LEDCHYYAEFFDITRPFPSQINYLEPDPEFCWNMRWREPFVRAGVPEACIILIQGYVS
                     TQILSGHSISFLIKRSALNPGVRYFARGLNEVHEPGNECECEFIFGSPTGDIWTQIYR
                     RGSVPIKWETVVKNKMTVHHIVTDQSSEGSKCYFRKLKERYCGIQTFCISLLRSNPES
                     GEYELHEAFSKVVKKLNNENSARFISFDLNYFLDNGGHTRAIAELCKLLGPLAQASDF
                     THYPNALDSSGNLNKNIEPDTRQVITLRFNCADSLDRTNVAAFIYSCAITTFLMQKQN
                     LIQNLDTFSFESLQKIKPEVIEYLAEAYVKSGDVVSLLYTNTVAAKTSIIRQYSPFLD
                     EASSDATISVKRRFNNMVSDPQREVLFEKWTNYDKNEIGDKFVLDHTKIQILSRGFPI
                     DVLILNENDIVDTTMNSFSIILPYSTKLTAIYYYATVNSEKNHPRNLFIQGQDKSQMK
                     TVKLPMTNENTVIRIPIDEIDDRNLDFIFHPQIQKISVGKILFEVKKVQDFYQYQVDF
                     SQQNKENFNLYKDFIVTTMQEIAFPTRQFQDIELQRLKMNLSREFDMNIKLSIPLDPY
                     KLSQYNSSTCYLCGNKNASNIFCFSELIKNRITKVTNQKSDNLIHICDECLEMANMLC
                     IQTEMMESTRFTKIHLKESKKRKITFSMPIVVTENPESFIIGAPQELLENTCAKEVSK
                     EFRFTVVLSHYCELEHFEFYVSKFSQNMSITIIVDEKLIPLVIYEKDPGVIWAGIQKV
                     VVTDICDIIFRTNEKFVLSGFQIHGIPTNKMELKTSSNEVVEEKVMKKSSSLNFNVNI
                     YSKLENSDKFTNPEKIMLNSKKFGVLVSVNRKSNRNNLVFGFYKEDDSEITFCELFTG
                     EMLEERKLVYLVDAPEGTKYARAFCSENVSIESICFI"
     gene            complement(<63973..>64170)
                     /locus_tag="TVAG_317860"
     mRNA            complement(<63973..>64170)
                     /locus_tag="TVAG_317860"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317860A"
     CDS             complement(63973..64170)
                     /locus_tag="TVAG_317860"
                     /note="encoded by transcript TVAG_317860A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00501.1"
                     /translation="MFRPPPTIIEIGTDEDMQQFQEYVENQSALSTPSIKQKGIFESP
                     DVKARPRQIISTPTGQIDSPN"
     gene            <64450..>65178
                     /locus_tag="TVAG_317870"
     mRNA            <64450..>65178
                     /locus_tag="TVAG_317870"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317870A"
     CDS             64450..65178
                     /locus_tag="TVAG_317870"
                     /note="encoded by transcript TVAG_317870A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00502.1"
                     /translation="MCGRLIKPVTRRAPLTARSLPSCERDLYKFRNQLNAIRKQKDPP
                     TSDAIYELKVEKQRLIEERDLLKVKITRYAEKSKTKPAPVRNAQIKKSLERQIKSLED
                     IVQGKKEELHAILTSDKAAQITEYQEELKILYLEVQRLKNSKKEAEIDLKDADDKVQA
                     INSQFSDEVLLKRRRVIRALEKEILKHNNRNERLRNDLEILNQQHQEREESSENNKLK
                     EQILELRKQIKQEKEAIENLQKGN"
     gene            <65443..>65919
                     /locus_tag="TVAG_317880"
     mRNA            <65443..>65919
                     /locus_tag="TVAG_317880"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317880A"
     CDS             65443..65919
                     /locus_tag="TVAG_317880"
                     /note="encoded by transcript TVAG_317880A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00503.1"
                     /translation="MYDHDDHPNIYNKLRSIFKYYIDSYNALFQLSLPIFDTTILEER
                     TQFFFRCFEEQCASFKVDTHFAAQPDQGEITGQWYFISANVAKTENTMTSDNQAMATR
                     TNVSIPSATRTIAQMTTASNTATESSPRKKGGQSFRGNVFFFMGIVVDASIKTKEA"
     gene            complement(66773..>67577)
                     /locus_tag="TVAG_317890"
     mRNA            complement(66773..>67577)
                     /locus_tag="TVAG_317890"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317890A"
     CDS             complement(67224..67577)
                     /locus_tag="TVAG_317890"
                     /note="encoded by transcript TVAG_317890A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00504.1"
                     /translation="MAEIARLKEEIAEHKGNIKEMQNEMSKIKEENLDRQRLENELKL
                     ANQVNEEQRTNILKVMGDIDSEKAHRREAETQLYETSKKLTEITAKYHENDRQTIEAI
                     DQIKRFEALLARKTE"
     gene            complement(<67723..>68058)
                     /locus_tag="TVAG_317900"
     mRNA            complement(<67723..>68058)
                     /locus_tag="TVAG_317900"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317900A"
     CDS             complement(67723..68058)
                     /locus_tag="TVAG_317900"
                     /note="encoded by transcript TVAG_317900A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00505.1"
                     /translation="MQFTDLLVHILTHSETRTTVADAVYAMNMIIQGVPSNFRQNALV
                     DTVTSGFLYMNKSTQEEIKAAKDSLETSILSINKKSADLEELKYKCKADVEIARKDQW
                     TMKKTIDEH"
     gene            complement(<68163..>68552)
                     /locus_tag="TVAG_317910"
     mRNA            complement(<68163..>68552)
                     /locus_tag="TVAG_317910"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317910A"
     CDS             complement(68163..68552)
                     /locus_tag="TVAG_317910"
                     /note="encoded by transcript TVAG_317910A"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00506.1"
                     /translation="MGALSITVLLNELLAMSFDIPKFLVKEKLLVPVFNYFVHSAHDF
                     VTAAGYNFLCEMFLMNDSFSFGPVDEIFAFALSVVASSNVSASLLRLESLLIMLRMMM
                     RQKKQLEYIKKLLLTYEDQIFVAFQRK"
     gene            <68681..>70258
                     /locus_tag="TVAG_317920"
     mRNA            <68681..>70258
                     /locus_tag="TVAG_317920"
                     /product="ankyrin repeat protein, putative"
                     /note="transcript TVAG_317920A"
     CDS             68681..70258
                     /locus_tag="TVAG_317920"
                     /note="encoded by transcript TVAG_317920A;
                     Identical to: TigrScan, GlimmerHMM gene predictions"
                     /codon_start=1
                     /product="ankyrin repeat protein, putative"
                     /protein_id="EAY00507.1"
                     /translation="MSQGIVLNYEYIGSHIKDYIDADDLSSTFEVEDIKSIMKFANLT
                     PDDFNSLLAQSRSVISARELYTCTRNANISINNLQDTISTLKSVQKYMKMRIFEGIVG
                     VLEQLQKDQSTTTNKIEKLQADLNQIQKEKENVEKEMQTLHSQLKEKEGNDLPKEFLS
                     KISELKNSENFDQIYKFFEEISEKGNQKMMQKACEEELWKKQNDDFCGTNVLHYASLE
                     GNLRLVKTLIEYGCDKEIESENGFTALHLASFDKLEVVKYLISVGSNKEAKDKNGRTP
                     LIYASINGHLEVVQYLISVGAYKEAKDNFESTSLISASEKGYLEVIQYLISVGANKEA
                     KDNDGYTPLIQASINGQLEVVKYLISVGAYKEAKDNFESTSLISASEKGYLEVIQYLI
                     SVGAYKEAKDNFESTSLISASEKGYLEVIQYLISVGANKEAKDNDGYTPLICASQNGK
                     LEVVQYLISVGANKEAKDNDGYTPLICASQNGKLEVVQYLISVGANKEAKDNDEKTAL
                     DYSKGAVREYLLSNARK"
     gene            <70380..>70694
                     /locus_tag="TVAG_317930"
     mRNA            <70380..>70694
                     /locus_tag="TVAG_317930"
                     /product="hypothetical protein"
                     /note="transcript TVAG_317930A"
     CDS             70380..70694
                     /locus_tag="TVAG_317930"
                     /note="encoded by transcript TVAG_317930A;
                     Probable pseudogene - evidence: both frame shift and point
                     mutation Identical to: TigrScan, GlimmerHMM gene
                     predictions"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EAY00508.1"
                     /translation="MSDCLKYQKPNKTCMTYAIISHNIDFITFLMNEYNIKINLEFSG
                     MFNNLESFLVYFDQTDDFNKCFVFSPIFNIPSLCEYFLSHGVEINAKDKYGKTVLYMA
                     AC"
     assembly_gap    72879..72978
                     /estimated_length=unknown
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     repeat_region   74277..75233
                     /note="repeat family R524a"
CONTIG      join(AAHC03008557.1:1..2738,gap(unk100),AAHC03003944.1:1..6247,
            gap(unk100),AAHC03000112.1:1..63693,gap(unk100),
            AAHC03009677.1:1..2389)
//