LOCUS DS113442 102874 bp DNA linear CON 15-DEC-2022 DEFINITION Trichomonas vaginalis G3 strain G3; ATCC PRA-98 unplaced genomic scaffold 1047229023799, whole genome shotgun sequence. ACCESSION DS113442 AAHC03000000 VERSION DS113442.1 DBLINK BioProject: PRJNA16084 BioSample: SAMN02953626 KEYWORDS WGS. SOURCE Trichomonas vaginalis G3 ORGANISM Trichomonas vaginalis G3 Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas. REFERENCE 1 (bases 1 to 102874) AUTHORS Carlton,J.M., Hirt,R.P., Silva,J.C., Delcher,A.L., Schatz,M., Zhao,Q., Wortman,J.R., Bidwell,S.L., Alsmark,U.C., Besteiro,S., Sicheritz-Ponten,T., Noel,C.J., Dacks,J.B., Foster,P.G., Simillion,C., Van de Peer,Y., Miranda-Saavedra,D., Barton,G.J., Westrop,G.D., Muller,S., Dessi,D., Fiori,P.L., Ren,Q., Paulsen,I., Zhang,H., Bastida-Corcuera,F.D., Simoes-Barbosa,A., Brown,M.T., Hayes,R.D., Mukherjee,M., Okumura,C.Y., Schneider,R., Smith,A.J., Vanacova,S., Villalvazo,M., Haas,B.J., Pertea,M., Feldblyum,T.V., Utterback,T.R., Shu,C.L., Osoegawa,K., de Jong,P.J., Hrdy,I., Horvathova,L., Zubacova,Z., Dolezal,P., Malik,S.B., Logsdon,J.M. Jr., Henze,K., Gupta,A., Wang,C.C., Dunne,R.L., Upcroft,J.A., Upcroft,P., White,O., Salzberg,S.L., Tang,P., Chiu,C.H., Lee,Y.S., Embley,T.M., Coombs,G.H., Mottram,J.C., Tachezy,J., Fraser-Liggett,C.M. and Johnson,P.J. TITLE Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis JOURNAL Science 315 (5809), 207-212 (2007) PUBMED 17218520 REFERENCE 2 (bases 1 to 102874) AUTHORS Carlton,J., Miller,J., Delcher,A.L., Schatz,M., Schobel,S. and Fraser,C.M. TITLE Direct Submission JOURNAL Submitted (23-MAY-2005) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..102874 /organism="Trichomonas vaginalis G3" /mol_type="genomic DNA" /submitter_seqid="1047229023799" /strain="G3; ATCC PRA-98" /db_xref="ATCC:PRA-98" /db_xref="taxon:412133" /chromosome="Unknown" repeat_region 25..1863 /note="virus-like, repeat family R128b" repeat_region 1870..2034 /rpt_type=tandem /rpt_unit_seq="ttg" /satellite="microsatellite" gene <2571..>2813 /locus_tag="TVAG_005230" mRNA <2571..>2813 /locus_tag="TVAG_005230" /product="hypothetical protein" /note="transcript TVAG_005230A" CDS 2571..2813 /locus_tag="TVAG_005230" /note="encoded by transcript TVAG_005230A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05680.1" /translation="MTTKVTEAMKQKFLVEYIKSGIIPEGFYIHTMKDGRVQFRKIKQ PLDKEGILRKIKLHEDNIAELKKKLEELEKADDSEE" gene complement(<3013..>3447) /locus_tag="TVAG_005240" mRNA complement(<3013..>3447) /locus_tag="TVAG_005240" /product="hypothetical protein" /note="transcript TVAG_005240A" CDS complement(3013..3447) /locus_tag="TVAG_005240" /note="encoded by transcript TVAG_005240A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05681.1" /translation="MSDYIYYDSFPERFRELFKTQVKLRNMHFNKDRPIDDERNPEYI TIPYDAKFIAYIPYGRRGTKTISTKNKNYFWSDEENCLIYINAYLNKATYCTKEGWTG FELYIYDDDGNRRCVYPYDNMYHCFHQALNEYIVSKGLIPVE" assembly_gap 3714..3813 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5317..>5670) /locus_tag="TVAG_005250" mRNA complement(<5317..>5670) /locus_tag="TVAG_005250" /product="hypothetical protein" /note="transcript TVAG_005250A" CDS complement(5317..5670) /locus_tag="TVAG_005250" /note="encoded by transcript TVAG_005250A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05682.1" /translation="MTPFTTAVTTPFTTAAITPFITVFQTAGETPYLTPFSTAFETPH STPFTTAELTPYGTAAYTAKETPFETAAITPNVTPIKTPNPDCVMDQDKIDNRLKYKR IKVIFALGQVVNNNI" gene complement(<6519..>6962) /locus_tag="TVAG_005260" mRNA complement(<6519..>6962) /locus_tag="TVAG_005260" /product="hypothetical protein" /note="transcript TVAG_005260A" CDS complement(6519..6962) /locus_tag="TVAG_005260" /note="encoded by transcript TVAG_005260A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05683.1" /translation="MIRAFIAVSLEEWKEEQHIIDAARLSESGLKYTADDKQFTFIKS TFYNINNQADSVLYANKFKVTLTDCSMYNCISGVQGLIYVGNVNPQEGTIDRFALEGF CFKNCYSTKKDNGCVLHIESDPTDRVKISKTAISGVNDGAFGFNI" gene <9495..>10043 /locus_tag="TVAG_005270" mRNA <9495..>10043 /locus_tag="TVAG_005270" /product="Carbonic anhydrase family protein" /note="transcript TVAG_005270A" CDS 9495..10043 /locus_tag="TVAG_005270" /note="encoded by transcript TVAG_005270A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Carbonic anhydrase family protein" /protein_id="EAY05684.1" /translation="MSQLELITSANQAFLEANPELTKLNKAPQRHIAIVTCMDTRLVN FAEDAIGVKRGEATVIKAAGNGIWTTGLSDIVVSLLVSIYELGVQEIFIMGHECCGMT HASTDSLGAQMLKSGIKPEDIEKFKSDLSKWVDDFKDPIDNIKNSVRCVRENPLIPKN IPIHGLLIHPDTGKVTTIINGY" gene <10856..>11425 /locus_tag="TVAG_005280" mRNA <10856..>11425 /locus_tag="TVAG_005280" /product="Myb-like DNA-binding domain containing protein" /note="transcript TVAG_005280A" CDS 10856..11425 /locus_tag="TVAG_005280" /note="encoded by transcript TVAG_005280A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Myb-like DNA-binding domain containing protein" /protein_id="EAY05685.1" /translation="MMSSSIESETTLKPVRMRFTPEEDAMIKDLVENKKISPWSEVAK YLPGRTGNQCRDRYNSYLYANTSSKSWTIEEDKMIVEKYKEFGPRWVLISKFIPGRNG NSIKNRWHKALVKYHGIKHNNVKQERRNKNLKYCLNCPATQPVNNEDINFLIDQLVKN IPDDSEMNIDLDSCFSEFYAENLDFPAFV" gene complement(11527..11606) /locus_tag="TVAG_005290" tRNA complement(11527..11606) /locus_tag="TVAG_005290" /product="tRNA-Leu" /note="anticodon AAG" gene <12521..>13696 /locus_tag="TVAG_005300" mRNA <12521..>13696 /locus_tag="TVAG_005300" /product="hypothetical protein" /note="transcript TVAG_005300A" CDS 12521..13696 /locus_tag="TVAG_005300" /note="encoded by transcript TVAG_005300A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05686.1" /translation="MERDIDDVSKSDVSLPRYVDLLTPFASIELNREVQRLIQEKTIL VSENRQLKEERDFFYSLLMKKAQNPKAEQNKLKLELQKHLNSEITIPLPEFHDIGIDA LSYTNTLSFLNSEIISILPVEHKQEPKEIPNVLSIQKVNSFESKPEEKIERNIILRIR KCSNFSVPLEDKSMKINTFNIYNSNIIHTHNYSDKFTQFEPAKKDKGIDNNGQTNDHA DIATSNVTDFEHSSTQTEILPKYSTAESQSELHFVNEASTQSQNESSLSSFLNTSKQI QYKTQKVQATNADRCDFSKKEFLSLLSTFENTTFKHAKEMLSLAQSGDAIVSYFTKLC GSRIQSLEFENSDLICEICRIRQESSGAIAKTIIKLKKTSINELELKDVVSRCLYNN" gene <14075..>14911 /locus_tag="TVAG_005310" mRNA <14075..>14911 /locus_tag="TVAG_005310" /product="hypothetical protein" /note="transcript TVAG_005310A" CDS 14075..14911 /locus_tag="TVAG_005310" /note="encoded by transcript TVAG_005310A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05687.1" /translation="MILYSRIRKTVKFPPDKNAQKTAIMFSVIGRSGGSMMELKNGQC EVKKVCKLTVDRHDVVKITLTTEDKSHSLGKTTVPVECFSSNTKCKAVLTLNTRLDFD PIFEFEFHLAKKEGNPFHADKGNFKKDLIKEPPETTFKEKMRRETMPAPAPVRVERSS SYSSEESSSESESSDSSYSQDDAHTQVNVRPLARPMPPKSSAPIPNAKPISPRPPYDP QIHISDSNKVIDLEIQCPISALRVPPFKTLLTEAYLPLQQKNLFDGCIQTPETMPQLF GM" repeat_region 15517..15541 /rpt_type=tandem /rpt_unit_seq="a" /satellite="microsatellite" repeat_region 15642..16460 /note="repeat family R321a" gene <16600..>16962 /locus_tag="TVAG_005320" mRNA <16600..>16962 /locus_tag="TVAG_005320" /product="hypothetical protein" /note="transcript TVAG_005320A" CDS 16600..16962 /locus_tag="TVAG_005320" /note="encoded by transcript TVAG_005320A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05688.1" /translation="MDAQNLANAQQPGQPNPENIPNEVRIQTAMANYGQVPTDVQMQT AMSNDAALGLPPWYANMRWKEFYTNPEVGYKQLYADDANTGVDPEYVFYQRRNRMYEL QLKNAMELRRKRKRLGGH" gene <16981..>17223 /locus_tag="TVAG_005330" mRNA <16981..>17223 /locus_tag="TVAG_005330" /product="hypothetical protein" /note="transcript TVAG_005330A" CDS 16981..17223 /locus_tag="TVAG_005330" /note="encoded by transcript TVAG_005330A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05689.1" /translation="MGFFGRIGNFFRNVGRGIWNGIKSVGRGIWNGVKNIGKRVGQFV GIIPKDPEPEEQAPVIQQPEPAPQSSWQPNPTPQPY" gene complement(<17228..>18076) /locus_tag="TVAG_005340" mRNA complement(<17228..>18076) /locus_tag="TVAG_005340" /product="hypothetical protein" /note="transcript TVAG_005340A" CDS complement(17228..18076) /locus_tag="TVAG_005340" /note="encoded by transcript TVAG_005340A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05690.1" /translation="MLSIEKENSRVATTKPLDELFTNVGQKFETETVKHEGYRFDYPL RWLRDPSVTKAIGFRRMKFISEAIHGFPFTVAFEVRYYNKEKRTYEKFEQGKLLQVNL LVNLETTLQAFQEKINDIYLEYANQFNIDEGEYHLDIIYDRKNATVKINRIEDLGDNV YISTKYNNLAWYRFLRMLNQPAEYPVHPDFYEVENPNGTYENVFDSDAIIVHASFSGA QNSFLCLANDFYEKPTKLYEPPSGSISDFQVWFTTDGRKRIVPLYHAFYLELSLIYNY YRTVKI" gene <18095..>19447 /locus_tag="TVAG_005350" mRNA <18095..>19447 /locus_tag="TVAG_005350" /product="hypothetical protein" /note="transcript TVAG_005350A" CDS 18095..19447 /locus_tag="TVAG_005350" /note="encoded by transcript TVAG_005350A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05691.1" /translation="MSKETASMREIQHNRQLIVQALNKNTTNFSNYSKISESLKEGNL KLTLNPMTDEFLFQDSKNHTVCINPTKGTLNEKPIDELLLKADVDNKADKEYVIEKVQ EEHDRADATYATKEHTHPELADKTYVDNKMSSEVTRADKEYSKKTHTHTIANITNLQE TLNRKSDVGHTHTSSEITDLNVSLEKKADKNHTHDFFATVGIENIAGTVEEPDGTGGD VLYWKPPNFPQGLTSEDDITTMKYIRCRNVYVMEDENNVKFTAQDLYDKKADKTYVND ELDKKADKTYVNDELDKKADKTELQTLKTEILQTVYPIGSIYTSMNSTKPEVVLGFGT WTQIVDRFLYCANSSKETGGSKTISGENLPAHSHYVDLSTSQAGWHKHRYWDWSAMIK GKGYDVKDNVKFAIDCYWSNTEGGGNHIHRVSGYTQTTGQSKDYMPPYMTVYAWYRNA " mobile_element complement(19444..20403) /mobile_element_type="transposon:transposon-like, repeat family R11b" repeat_region 20420..20737 /note="repeat family R31b" repeat_region 20842..20997 /note="repeat family R31b" gene <21017..>21235 /locus_tag="TVAG_005360" mRNA <21017..>21235 /locus_tag="TVAG_005360" /product="hypothetical protein" /note="transcript TVAG_005360A" CDS 21017..21235 /locus_tag="TVAG_005360" /note="encoded by transcript TVAG_005360A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05692.1" /translation="MTEEVETVDLTPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXVGLGYPTLNPEGTSNGVARNFKML" assembly_gap 21061..21160 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 21317..22063 /note="repeat family R31b" repeat_region 22202..22465 /note="repeat family R23a" repeat_region complement(22515..23210) /note="repeat family R23a" repeat_region complement(23593..23826) /note="repeat family R23a" repeat_region complement(23950..24336) /note="repeat family R23a" repeat_region 24474..25061 /note="repeat family R1569_R581_R22b" repeat_region complement(25091..25291) /note="repeat family R1569_R581_R22b" gene <25761..>26456 /locus_tag="TVAG_005370" mRNA <25761..>26456 /locus_tag="TVAG_005370" /product="hypothetical protein" /note="transcript TVAG_005370A" CDS 25761..26456 /locus_tag="TVAG_005370" /note="encoded by transcript TVAG_005370A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05693.1" /translation="MTNTEFETVKKIDNDTKVVRIGDLDVRYSKKYNKYSLSDIISPS GKKTHHWVGIASTQKILTRNPELMISVRFCGTTAYLIDKSLIPIVLLWIDPVVGYNFI TYGSFDTERCSEGLLYIVQKPKDFNTKRYKIGRTYNITQRYDSIVNRVKVVFVNDMRA AETELLEKFEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVIPSSSSYGFP TSTSLSLTLTTTL" assembly_gap 26275..26374 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region complement(26880..28487) /note="repeat family R1479" repeat_region complement(28520..31720) /note="virus-like, repeat family R371,R1794" repeat_region 30359..30461 /rpt_type=tandem /rpt_unit_seq="ttg" /satellite="microsatellite" repeat_region 32758..33600 /note="repeat family R23a" gene <35621..>36061 /locus_tag="TVAG_005380" mRNA <35621..>36061 /locus_tag="TVAG_005380" /product="low molecular weight phosphotyrosine protein phosphatase, putative" /note="transcript TVAG_005380A" CDS 35621..36061 /locus_tag="TVAG_005380" /note="encoded by transcript TVAG_005380A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="low molecular weight phosphotyrosine protein phosphatase, putative" /protein_id="EAY05694.1" /translation="MGVPSVLFVCTGNICRSPVAEVICSKYTKGSIKTDSAGISNHHV NEQADERVFEIVSQHGIDISKHRARQIRADDWMLFDYIVALDQKVYDVLLNMRPNTSI SKVVLYGNIRDPYFCGRTGFHKMYEEIETVMPKFLESNKIYNMS" gene complement(<37475..>39952) /locus_tag="TVAG_005390" mRNA complement(<37475..>39952) /locus_tag="TVAG_005390" /product="Amino acid permease family protein" /note="transcript TVAG_005390A" CDS complement(37475..39952) /locus_tag="TVAG_005390" /note="encoded by transcript TVAG_005390A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Amino acid permease family protein" /protein_id="EAY05695.1" /translation="MEDQHDDGKAMELESPAVPSAIDTYENIPATVFYRSFGIKRASP VDIRTNADSVDNNLMPVTKSKKGANFGWFDGVYLRCVLNIISVVYYLRLGWVVGNCGL LLTYVMIIVSALADIFTTLSLSAIVTNGTIKGGGVYYCISRSLGPDFGGTIGVVFSLA TLFTVILNVFGFEETLEMILPHPITTDGKWDIEIIGIALATFAFILICISLAFESVMQ WCLFIVIIISVVLVFIGFAIPKTPSWKVSNIKANLYPKYQKGESFFTIFAVYFPACTG IMAGANISGDLKDPNHAIPLGTLLAIITTTVVYLITATILASAADQSTLVNNYGLLAE VSAWKWIIYIGLLCASFSSVSSAMVGAPKTFQALCKDKILPKIFDIFAWGKKKSGDPI WGFLLAYILTVISTFVFKNLNAIGPVISSLFLISYGIVSFSSLVCKLSHAPSWRPSWK YYHPITAVLGAIMCFASVFLINWIICLVSFIVVGIIFGYFHWHDSSNSKWGEYPQSIL FSDTISRIDKLNQFAPHVKNYRPIFEFLIERDGTEKKQLQNALPFNDAAEVSSSILFL SSYGVDNPQEITKPDFFAATVLFKNWRTIGIEKIPALISSTGVGKITSNVLCTSITQK FLKNPKSFEFVGSAFDSYLGVCLARNFETVDQSLEQTWPIDVWWLVDDGGLTVLLGFL IQMQESWKNCPLRVLSVTERTESLNEIQVKITKLMHLFRINAEVIVLNGIEDKPSQES MDKWKALNINNCDEMTMKKVETFLRLRDLIFKTSAQSSMILCSMPIPRATQDPNVWLG TIDVVSESMPPFIWVHGNGENVVTYSA" assembly_gap 40186..40285 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <41722..>42624 /locus_tag="TVAG_005400" mRNA <41722..>42624 /locus_tag="TVAG_005400" /product="hypothetical protein" /note="transcript TVAG_005400A" CDS 41722..42624 /locus_tag="TVAG_005400" /note="encoded by transcript TVAG_005400A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05696.1" /translation="MKRGRKPRPIPTSVINKKKEKERIEELYYAERKRLYAGEEEFMN TYHPFEESKKGCGKKSSPLQKAIIFCMKQNNGAATEEQLLEFVRNKWDIIMKYTPRGF SMEPSLRVIRLNLVVRKKARHLFLKDPKNKDLWMLNSNLRKIPVKRTLFKSSAEEIPE ENIENLASDSGNYSDSEPDSMYGSYIMNHDTFERHVEDFMRSIQTSVKIEEIANSLSK YKEKQGLFQCLPFERRIRACLVVLKSEGRVFFDELTNTWSNQKPPTKIEKPSENRYLL TDVKIQNLTIDELYEMVKNKCFVK" assembly_gap 43326..43425 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 44258..44412 /rpt_type=tandem /rpt_unit_seq="ttta" /satellite="microsatellite" assembly_gap 46798..46897 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<47494..>48270) /locus_tag="TVAG_005410" mRNA complement(<47494..>48270) /locus_tag="TVAG_005410" /product="hypothetical protein" /note="transcript TVAG_005410A" CDS complement(47494..48270) /locus_tag="TVAG_005410" /note="encoded by transcript TVAG_005410A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05697.1" /translation="MNYLAYGRNGKKEWIEPTFKKILEIAEKFPEFSKYIQNQWISNQ ERWTAAERDENLALTNNISESINKKIKYYYFGGTIFMRFDRFVMKLIDFIVPSFYYRI SQDIRLRDKIPNPLPSEKKPKKSTIRLDTEKCIMLTDKIKLLIVNSSANLNTLQLGLD DLLDKVVKAAKVQKRMTQYFSKLSIPMEIKLSILMQITEFGCNTPQFIVENAKSFQDK IITDFDLQIYTTLLLHAKISHNVNLSILLSWEVSQFLQKN" assembly_gap 48476..48575 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(51439..>52345) /locus_tag="TVAG_005420" mRNA complement(51439..>52345) /locus_tag="TVAG_005420" /product="hypothetical protein" /note="transcript TVAG_005420A" CDS complement(51482..52345) /locus_tag="TVAG_005420" /note="encoded by transcript TVAG_005420A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05698.1" /translation="MSVRDRPAANRFLDMKEKEFKYRQHLNFVRTAKGGIDMTTPDVP PRLRLMKRNNAIYREKLIKNMTVHDRLIENARRPGTAGGLAVLDDIPLFPKRKTTTKL AALHDEEIYKVESAQGKRPNRVDTESETVMSPPSTSNRVSSSSSSSSSRSNKEQPENI RIETIEKNDGDKVCIITDKPDESQEMVVLPSEKHSEDDSSEEHNSQSSETKNEAPEQP KQQPQDKKEENNETEKPPAPENKVESNDEKETRQKTDSNSANFITGQTESMVTEKSSL HNIVQEKVENI" gene <52573..>56388 /locus_tag="TVAG_005430" mRNA <52573..>56388 /locus_tag="TVAG_005430" /product="hypothetical protein" /note="transcript TVAG_005430A" CDS 52573..56388 /locus_tag="TVAG_005430" /note="encoded by transcript TVAG_005430A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05699.1" /translation="MSDSESNKSDTAPEETNNSDSEGQYYSDASASSTSKSNQNEDSE ENEEQSSDHYYQSYSEKNSDNSSGGEEQNEEQNEENDEEVSDSDEREYSEEEEETEKK TYKRRKLMRSKFCKNFSFPPTDYDKTIKIKSKFDEHQSLMIASIVNKWRNGLCSLFYS ENSKFRNKVIVGSIIALHKNHKNVPPSLIVCSQKEAAKLSRMIHKYSKLIISVSSKNK FSRDLSDWVTEDLQKADDFNVFICTKKFFKKKLKYLPHEVAWSTVVVTKVGSKTKDTK KFCKIFEKISHFSCILCSSDLSNMKEQDIKNIFSLMKIKVPSSFTDQHIYISLSSSFV NSTDTDLPKLLGSIEGTKNPSVNPYYDASETNILCPMSEYEFSVYIHLLNKSKELLIS GKYDAADLHDIASDLLSACHHPIIVDGVKAGNYILSIPTNNHSAKMIVLANLIKSKEY AGERIVIITEDADSSVLVKFGLESYGIKTIVKGKINKKIPWEKIRDWQQTTNMPIVID ESNYKDAVTTITPTVLISYDSYCSLLMFRSKKKWTGLKRIRLLTAYATDFAFQSQILQ YTNLTIEKILDEDTPKFRRLNAILRYCTAHLPDIKICSNDLKSPITTEQIILESAKME YPKLDGDFSNNKEFWKQIFTIKPYSKILKTPKVPMTKYKGRVELRDDSFGSDSKRKEK SSDERQNDSESETEHETRSKKKKESEQIEDTYGSKNKDGFWNVHNVKEAVFHAMNFGM RDFDKVNITRYKREIQQIVQFCYYKLRSTGKVPAACKYIQELPGMKSIPISPEIVKEV EKMIGNRQMVYSFELASCVKDIVESKFTIYKKPSQTPLPPTSNWSYEDDIKLIKTVYD KGVINFGRDSEYKGSYDIKTYMVRLVLFIYRRIKKSYLGEIGVKEMRSMYKTLITYGY PNHQLFLNAVGNNYLDSKQSLHFLQSMLRFCTETDLNKRKEIAAAFPERFQKYQVTLV KQRLSDFERIRNLSKDIAGTCAEDWEFFRALDKHGFSNSYVSPTLIICLNDNLSEIKL RQRLKSELLANNHSGKILFEYNGQNLERLLPIRLSAMIMLENLGKLTDYCDDIACFFD GYRVSVICPSLLSFEKLVFVTCRVEIREMKPKFIIECLEDKKRFFFEGDTPDSCWEMY RSEIEMKQETSCPQFDGYEMFGFTTPNYHKIVNCVLKEDKCKSYIRRTFKDLNYKFSR ERIQIGHYASVEKVVEKKKINPGDAKFDFSYLTRGEEESSMVVLSNQSSCFNALIDLY SFDDELHVY" gene complement(<56483..>57436) /locus_tag="TVAG_005440" mRNA complement(<56483..>57436) /locus_tag="TVAG_005440" /product="loricrin, putative" /note="transcript TVAG_005440A" CDS complement(56483..57436) /locus_tag="TVAG_005440" /note="encoded by transcript TVAG_005440A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="loricrin, putative" /protein_id="EAY05700.1" /translation="MNQWVLNNTNKGTNKATTVGNTTVFQYPCDSNNDCTFYNAVLSP GLYKLEVWGAQGGGSYHDGAWCPSRGKGGYSVGAMSLYKETYVAVFIGGRGQDGVNPT ISVALGGYNGGGSCIMYSGDGSDDTGGGGGGASDIRINGIDPKNRIIVAGGAGGNGFD TGYFNLQPYPYGGGLVASPPVGKNVQGTPASQTTGYSSSGQGQTATSYSEMMFAGGGG GGFFGGFTIKGSCGGQGGGGSGYIGGVTSFGDITALSKPGNENMPLIDGNGVGNSDHG KARITLLFSLPVLNKQRISCMQIYFCRSNIFQVFIFTLFLS" assembly_gap 57851..57950 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <58367..>63175 /locus_tag="TVAG_005450" mRNA <58367..>63175 /locus_tag="TVAG_005450" /product="hypothetical protein" /note="transcript TVAG_005450A" CDS 58367..63175 /locus_tag="TVAG_005450" /note="encoded by transcript TVAG_005450A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05701.1" /translation="MLKKSFFLKREIKGLFIEHPIKNIAIHDNIFFYYDVDGYIKIFD AIKDVNDTFNKPFTITSFPIDIALNGAHTFGAVSFNGGSIVIFDLIERKIWKTLNRVT GKSLNHILFLKDDCIIAVDEAKKLIKFVMKNSFIGASVEEIKICSFATTPLHFIIPPI FKSSENYSGLATQSSCLSSKYYGTVGISFPSKFILAQVLNDFSIIVELPFENSIPALY LTDSETLYVALGTQDQVVIYKICAINSIKPEFICFESIQQKPIYMSFLSQSILVAVYS DLTCTVFMFNQNRRFESFIDVKGKLVTTSENIGVVADDAIWTLYFHTFSDKMDQLRLM HDIRGALALCRLATIGDETAGIDLPSGTEMRSLIIEKELSPLLDEDIRNKLKENKDKA DELITYLIDLSRELNMNEYMINYAMKIFEEYGLMELFVTKIVENDPKQQFFFVNEKFF DYVIKFSKNIANVDDFILSLPSKFANPNKILEYSYENNKPWLSARIYAYKLNDYLSAI KTLSSIDDFETISKILLSISKISISQMSEIISWLCSSSKENRFPFLFKLITKGKEVDE ILRNLSLFVSENNIPFDISTFLTAILYVLSCLNVKSTDRLWKVSEEIISKNIVKIPTF LLDFVLRNIFTKEYVEPDMREVTLMSILTMDLSAKFKMNLLPLILSFHFKNAKQFILL NCGDYDVILKNYIMERESPMPYLLKQSRFKDQENENLLLAIAKNSLGILEIDKQNFVT FLLENYQNSLDFILENIDGFHAQGCLIHELLKKDKKLKFTKMVIVNYSIYLNYYYPNE IKEIIENYSDVDFSLLVNHLVKQRNFELAIKICSNQEIKRKLIVTFIREELYQMKLSS LMIAIHEYKDELDFASSRAVIRSLSIPLMNLAENKNEKQLSLLSNVIEFTHNSLQDNF SVPNFIFVVEKSLNESKYYDMRKELAIYMSGIERDIDCNSELVSKHKELCTTFINVEF NTNDEISEEERISKENSEKERKQKEEQEKERIRKEQEEKERLEREKKLEEERIAKEKK EEEERLAKAEKERLEKERKAEEERKQKEMEEQQRLEQERKEKEEQEKERIRKEQEEKE RLEKEKKLEEERLLKEKEEQERIEREKKQKELEEQQRLEKERKLEEERIAKEKAEKER IEKEEQEKLERERKAEEERIQKEKEEELEKERIRQEKERIEREKKEEEERLAKEKKER EEQERKQKELEEQQRLERERKAEEERKRKEQEEKERIEREKKLEEERLRKEKEEQERK EKERLEKLKKEEEERIAREKKAEEERKRKELEEQQRLEKEKKEEEERIAKEKAEKERL ERERKAEEERKQKELEEQQRLERERKEKEEQEKERIRKEQEEKERLEREKKLEEERLL KEKEEQERKAEEERKEKERLEKLKKEEEERIAREKKAEEEKKQKELEEQQRLEKERKA EEERKRKEQEEKERREKEEQEKLEREKKLEEERIQKEKEEKERKQKEEEEEKNSKEKE VSSEYEDSESSVSLPVAVKSREIEVEDDDEAALLDDPGMEDDGNEEGYEENSDFYDDD DDDDEGLSVLTKVVEEPPPQTKKAAKEYSSDEYTSSYTASESEYSSSYTD" repeat_region 63012..63036 /locus_tag="TVAG_005450" /rpt_type=tandem /rpt_unit_seq="atg" /satellite="microsatellite" gene complement(<63499..>63723) /locus_tag="TVAG_005460" mRNA complement(<63499..>63723) /locus_tag="TVAG_005460" /product="hypothetical protein" /note="transcript TVAG_005460A" CDS complement(63499..63723) /locus_tag="TVAG_005460" /note="encoded by transcript TVAG_005460A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05702.1" /translation="MLFENDLEVVLLGQDAVKTADQVKEDTKNIEKKNKNFPVWAIAV IVVASVFVLVIIIVVVIICVKKSGRVYGSD" repeat_region 63532..63603 /rpt_type=tandem /rpt_unit_seq="caa" /satellite="microsatellite" gene complement(<65081..>65908) /locus_tag="TVAG_005470" mRNA complement(<65081..>65908) /locus_tag="TVAG_005470" /product="hypothetical protein" /note="transcript TVAG_005470A" CDS complement(65081..65908) /locus_tag="TVAG_005470" /note="encoded by transcript TVAG_005470A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05703.1" /translation="MNDYYPSNGYYTGSGQNWIDRFIIPCNQAEGDEFIQIVGVNENE KSGAAIIRPHSKYKGNIVISTTHVHPNTHNYDSTNEQARSVPMQHFLSYHAGVEKVFW YEFQNIAIESDKKSNLNPEHFSGIVEPGQIPKKAFLAHKAMVRAMPPTSVMDSDLNFS QNEEWGIFHWKRNDGLDGWCLWSFDELPKYIYFEGEIHDSFDLVGDSLNLNYGSSLTL TWDPIYIIGPTKVNVSDIPPPSRTPYPSPSDNTSNTINPTIFLMKILREKITKDILR" gene complement(<66059..>66817) /locus_tag="TVAG_005480" mRNA complement(<66059..>66817) /locus_tag="TVAG_005480" /product="hypothetical protein" /note="transcript TVAG_005480A" CDS complement(66059..66817) /locus_tag="TVAG_005480" /note="encoded by transcript TVAG_005480A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05704.1" /translation="MQKFENFARKFFTKYQDHGYIEFENEPDFNPDGSWFMKKMVKAK EVLNSINSSVKLIHAGIGLANMNWFDETMKVPGAVNSFDIMALHPYTDQFINFGQMRR LKNMLEGWPRHIKEKYGKDVPLWITEMGMSTPYIAWYDYYKWILNVSSNILFDGKIPN IAMFFDAKFSSDEFGMNHPYNVIPSTLSAVFGKKVKQFNLKTIKNIKVEEYPILFLPF GEMFPLNIYDDVFEYVKNGGTIYVNEGYSFYYTW" gene complement(<68061..>70298) /locus_tag="TVAG_005490" mRNA complement(<68061..>70298) /locus_tag="TVAG_005490" /product="surface antigen BspA-like" /note="transcript TVAG_005490A" CDS complement(68061..70298) /locus_tag="TVAG_005490" /note="encoded by transcript TVAG_005490A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="surface antigen BspA-like" /protein_id="EAY05705.1" /translation="MGECTKLLKLNNKAFSNCQKLKTIIMPPCIKALGAGCFFCTYSL QRIDFPDSLEIIPGWVSTDYNEFQSSGITEVSIGQNSNLTNIGTDAFAGSKLKYFTIP SKLKMVDGSCLQGCPIISISIDRRNPYYTTDGTSIFSGSDSSTLFYVSSALTGTYQVP TFIKKIGNSAFRGGNINKIILTSNVTTIEDWCFCGSQITEFTFTDQITSIGTRVFSGC VKLASVTLSENIKKIPGYMFADCGNLKKINIPQNLTSIGPGALSGCYSLKSITLPKTL TELGDGAFSNTGEINITSLSSSFYSETFLTYKDNKETLILYTGSNTDNDISIISDCKS IGDLTFYKKKLRDVTFQSEDSENNISIGYQAFRFSTIRSIIFSPGLVSIGKNAFDSCG SLKNVTFKGNKIKYIPNYCFNNCQNLEHITLPSSIERIGEYAFAYCPLIRDIGISGMT NLISVGAYAFYYSGLSSANLAHSGCTVDVKSFMGSSIKELTISSFIPQQLCQYCVSLE KLNLKIGVSVIGPYAFDGCTSLQGFTIPNTLTSIQGFAFQSCISLSTVYMGGNCILSR VDGGCFYECFSLTEIILPTMDNKYRFENGALTDYDQTNLIVFLPYSGVKNFIVPMTMK TISQCAFMGSPSLVRVFFNGKNIQTIDYQAFKDCKNLNLVFFSSSSIKTIGDQAFDGC NLLRKCGSFSAPSNAQKIIIEQGKIPSIAFKDDCGLSNSCKHIQHVEISSSYLYLFKI KKEHF" gene <73325..>74833 /locus_tag="TVAG_005500" mRNA <73325..>74833 /locus_tag="TVAG_005500" /product="hypothetical protein" /note="transcript TVAG_005500A" CDS 73325..74833 /locus_tag="TVAG_005500" /note="encoded by transcript TVAG_005500A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05706.1" /translation="MTKFSRQTLPEQFLQAESFVNLVWEICEENFEHCCNAIKETINN NLFSKSTTIDILCAISIFRPRKTRILYKCILTLADNFDIDQVFFRSTALKSALADTTH NNKSYAYIDAELDDILNIYKKNEIGYCLLNDDLENFQKLTLNQSFDINTRMALCNEPQ SKETTYLNVAARYGAINCFKYLNLNGLMPDSDSFNLAILGGNFEIIKILSSTANITNV SLQKAVTSHRNEIAHWLIENYELKCSWESMLRNYNFTFFIDSLCSCPTLDTFDYQNDT PLIASCRIDILWLSKFLMEHTKDINHYNNQKVNAILCASMGKNEELINILLDKGADIN SHNAKDATPLMVAYSNNRREIAQLLIKKGGKTNGESNDLFCAIEHNDYWTVDMLLKQG ADVNQTFRIEKVTPLFHAVYHRLDELVSLILQYKPNVNQRVGYGQMTALMEACKNGSE IIVRKLLETGADVNMMDENCHDALYYANLSNSSEIIKMIEEKLEKPDENIEN" gene <75662..>76657 /locus_tag="TVAG_005510" mRNA <75662..>76657 /locus_tag="TVAG_005510" /product="hypothetical protein" /note="transcript TVAG_005510A" CDS 75662..76657 /locus_tag="TVAG_005510" /note="encoded by transcript TVAG_005510A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05707.1" /translation="MSIDELLQNKTCVQKEAKNDISQDKNTQKQTTNSESNNDIDLIK MFDDNIAAYDKRYHMKSNESIDEVFALIEKVLISKYKTPSINIVLTILEAIRYNYRSI NIYIDLLKRIITKYPIPSLPKEQVETAKYNGLILSTNPEEICLIDRSLYEQEENEIIE IIAYDQIDKFKEYISKTKKNRISSFDIPSYRRVTHIEGCAYFGSVNIFMFLFPDAYKS PETFECAIIGGNTDIINECLKNGMFYFDSVNTAIECHNNQFLEYVLEMGLVDIRKFKY LVDSTCTATNLKALFLLYNKDKEGTAQTFAAFPQLNDIIKSKIIDFYIRCQRIFK" gene <76683..>77234 /locus_tag="TVAG_005520" mRNA <76683..>77234 /locus_tag="TVAG_005520" /product="ankyrin repeat protein, putative" /note="transcript TVAG_005520A" CDS 76683..77234 /locus_tag="TVAG_005520" /note="encoded by transcript TVAG_005520A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY05708.1" /translation="MVKFIIDYYKENNELSDSILEENLLLSLEFGQSEIAKFLVSLGA KINKPDELNREFKRAIKELNEEIAKLLISIGANVNIDIDDCHSYLHKAVYKQYEKRVA LLVKLGANINSHDEDYNTPLHLAVRERDYQIVDLLISLGADLEAKGENGLTPLQMAED YRHNNIIQLLISKGANVNATKKK" gene <78600..>80030 /locus_tag="TVAG_005530" mRNA <78600..>80030 /locus_tag="TVAG_005530" /product="hypothetical protein" /note="transcript TVAG_005530A" CDS 78600..80030 /locus_tag="TVAG_005530" /note="encoded by transcript TVAG_005530A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05709.1" /translation="MFDDNIVTYDKLYHIKSNESIDEVFALIEKVLISKYKTSSINIV LTILEAIRYNYRSINIYIDLLKRIITKYPIPSLPKEQVETAKYNGLILSTNPEEICLI DRSLYEQEENEIMEIIAYDQIDKFKEYTCTTTKNRVFSFDIPYFKRVTLLEGCAYFGS VNIFMFLFPNSYKAPETFECAIMGGNTDIINECLKHDMFYYHIVQTSIECHNNQFLEY VLEMELVNIREYWFMFQPIFTSTNLKALFLMYNKYKEGIAPCFAEFPQLNDIIKNKII DFTSNIELFLEKAIHHNNFEMVNFFIDYYKENNSLSDSILEDNLFLALFFNRSEIAKF LVSLGAKLNDDIVLNDEFIDAVRKLNEEIAKLLISIGADVNLEIDDYHSYLHKAVLDN DSKRVALLVKLGANINSKDEDRNTPLHLAIMERNYNIVDLLISHGADLEAKGENGLTP LQLAEAYIASDIVQLLISKGTNVDAK" gene complement(<80485..>83118) /locus_tag="TVAG_005540" mRNA complement(<80485..>83118) /locus_tag="TVAG_005540" /product="hypothetical protein" /note="transcript TVAG_005540A" CDS complement(80485..83118) /locus_tag="TVAG_005540" /note="encoded by transcript TVAG_005540A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05710.1" /translation="MSNSMSVSTFDAHELSPGDSFLIKSPSKDDENIVKSVVYAGENL ILYDKFYEKIRFDLVNDDSIITLLELAFNYSYLSSKQLEFPNIEPEITQKDYETRIHA WKSRIETLIKNILLPRKIVSKVFIPLRPSLIEVNTPIYRKFDPAKNPLQPKNFLRMIS KFFSDQRVDISEVLPVQIPKRDTVMLLHHMTVDRQWQSQSIPPEPNYLLYENFEDYEH AYLNWYEITHGSVSIQDARNFKNNIKVEFANHQTIGKIEKETQEKSQPDLIYSYDWVK GLKKPNDSINLDLFYEPTNPPEKENILAENMVFGVDKDEFLNQMIYFGEYQPKIKSNG PQHAFKVLHYPIKSYVQEELQNVINTNPFKIFNYCIDEKQLSSLLEATTNNTSPIVKL INSFNHIELNQYLDIADNSSCHAYRISYFFKLMMKYPKIRLFMLNIFKNPDNIDFLYR FVRIFLVLCHENIRLHKRPENCSHFSISVEQVHLLSILINLQLSPPFTEFDCELHRLC RVELANIASFLQNPIICVGLMKSLKNDVYSPTSFDICTLSSIPSDQILNLLLKDQILE TVIEASEYKIGRYFLNSIMCMHSGWFAHNFILQSRNFKQNVIFKISATASQFISIILN QYGRYVCQGNCPPQLDHINDILQVILHGYSKRFLPIINSIIRLMNQIKLTDSDSYYEG LAGSFLGQICVQALCGSNINVEECFEILMQCTNFPNFSSQILFNGEFVHLLLDNLITG TRKSMDAAWKIFNAAEKNKNAVISTFSLPDCQIKFQKMAETQNPFVFRKFCKFIMTLT RIGGFGLLDNFLPLIAPKMGSFACTIKNSYLIFGNSKAVRVMQQMLTKLFSSEIKSDF RSNLKHHLESLKFEMNKYKKL" gene complement(<83641..>85953) /locus_tag="TVAG_005550" mRNA complement(<83641..>85953) /locus_tag="TVAG_005550" /product="hypothetical protein" /note="transcript TVAG_005550A" CDS complement(83641..85953) /locus_tag="TVAG_005550" /note="encoded by transcript TVAG_005550A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05711.1" /translation="MNECLKFEFPDELCMTYAIYSHNIDFVSFLANEYELDIDLLACY HCQNLKAYLVNIDITNSLNKCFVFSPLFNIPSLVEYFIYKGIDINIVDSDGESALSYA ARIPNTKIVELLISFGANVHSMNKDGFTPFHDAIIYNQEEIADILISNGADVNQKTNT GIYSLEIALNNNNNKIAEKLIFNGANINDKDNDGNFPLIFAIQNINQYLTELLIAFGA DVNATDNNGVGALFQAVLENNKEILELLISHGANINAKIKEGIAALHVAIEKIDIAKL LIANGADLDARDFKGDTALHHAAFANCYEVVKLLVINGANVNAKNNERMTPLHYAARS KNKEIVEFLISKNADVNAKGNGDATALMCAVNNNNKEITQLLLWHGADVNSKMVDGSS ALLYAAESGYTEIVEIFISFGADPNVKTDKGFDILQYAIIKDYTEAAKILILNGANIN TKDNHDLTSLHYAIKRNNRELIELLINHNIDLNKIDLTELLPLHTAATVNSVEAAEYF ILNGVDINAKDDLDRTALFYAVFFNRLDIIELLFKYGADVNSETEKSQNLLHLAAFKN YKEVSGLLISHGIDINAKSIYDRTALHFVSINNNKEIADLLISHGADLDAKDEIQKTP LHHAAINNHQEIVELLVSNGADIDVKDEHGVTPLHYASRSNHKETSEVLILYGADINA RDNNGRTALHYAASKNCIEIIKLLIAYHVDINAIDNEGKAAIYYAYENGYNEIVDLLI SNGSTGLEPIKTMEVILFCLFSIYNSITDN" gene complement(<89820..>91370) /locus_tag="TVAG_005560" mRNA complement(<89820..>91370) /locus_tag="TVAG_005560" /product="ATPase, putative" /note="transcript TVAG_005560A" CDS complement(89820..91370) /locus_tag="TVAG_005560" /note="encoded by transcript TVAG_005560A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ATPase, putative" /protein_id="EAY05712.1" /translation="MRWILFRGRKNNNNLSGVYFDLTELSENELLLEQQKQKALEASN AKSMFLANMTHEIRTPMGGMLSLLELLMQTEMTEEQQQMMKVVKDSFNRLMEMLNDTL DIAKIDQNRMTPSYIVFTIAEYLKPLFTNLSQQVNPNVHFFVDVDAEFPLMFYGDPHF LMRICHNLISNAIKFTEKGSINCEFRVNNDRGGFDLNVSDTGIGIQKSKLTEIFETFI QGDSSVTRHYGGSGIGLSLISKLLKLIGGEVKVESVPNVGSTFMVHFPYEVCYVPYIN PKLSNEPTYLLDLAGMSSYVIMMKFAKFYGVTIIKDPIVKKAHIKVVAAKNENEANEL EKIYPKAKIIIFTENRYFNEKVTHEIFKEPILPAQLRRLLNEAKRSYKYYEKSNLSEE EEKQIKVLAAEDNKVNQLVLQKVLTKLSFEFKIVSNGQEAIDSLDKEDFDIILIDQHM PIMDGVEATKIIRNSDKKYSKIPIIALTASTLKEDMDECINSGMNTFVVKPVSMEGLQ RVITKYAK" gene complement(<91493..>92971) /locus_tag="TVAG_005570" mRNA complement(<91493..>92971) /locus_tag="TVAG_005570" /product="hypothetical protein" /note="transcript TVAG_005570A" CDS complement(91493..92971) /locus_tag="TVAG_005570" /note="encoded by transcript TVAG_005570A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05713.1" /translation="MLKATGIDTFICAIRQIFSRVDFDAFGFFCDVQAGLEVIEFCTK DQQINKIVFDIVQKMKPTHLKIYRRKNYLIYASMQKLGRNNYYVVGVIDKNYPIIYSI EEPFATLALLLSLIFHLNISLSEDSKTLQRVHDLFRRIGVFGLFEFYGSTGESCDILS HQSKWSIKMTDDLVNCIKKTPYNTDELHIYKMPNNQWIGIISRVERDYIKSHYVRTIL VEDLTRMKKVCDKETDIHSDELLLQQMLNIHVFHKGSNYMDESLAQELGYSRPIDSIF DIIYPEDAGFFSKYIRTPNWITFRLKSSTGEYMWYCSYHNCLFCIHEDLQQPTAEFAI DLDQTLMAAAGNYINLYSIDVKTDEILTAFAPQRFVPHIGREFVEYYEESFKSKFELN YAKIKSGEQTSLHFLALVITTDEKTYRWYDTIMERHQNDTIASPSFFAITRKDSKTNS LMQKVSLIWHFSIQMLFIGNLRTMMSKNLFLHHVLLLTSPYT" gene complement(94443..>95786) /locus_tag="TVAG_005580" mRNA complement(94443..>95786) /locus_tag="TVAG_005580" /product="hypothetical protein" /note="transcript TVAG_005580A" CDS complement(94494..95786) /locus_tag="TVAG_005580" /note="encoded by transcript TVAG_005580A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY05714.1" /translation="MPSVVAEIVVALLILCTGACNSIVSKLLYQTDGKTFDGTIKYFE KPWLLTAVMFLGEFFCLIIYGISWLIFRCTKKEEEEENSLDSMSQEEDPKNDKIIFIA REDVEGDPTSGLKWKYPLYVLLFAACDLISTTMMSIGLVYCNASVIQIIRGMVIVFTL LFSWAFLGRKPNLFHVTGVLFALVGLVLVGVSAVMSDDSGTTKFQGKSLLGIGLTLIS QIFSAIQFTFEEKLLKGINIPPLFLVGSEGLAGFILCCAIALPAANAIHGNDYGVQEY FKSTIYMTFHIPQVTALVFTSAIAVCILNWTSFVYVKYLSAVARTLVNACRTILVWII MVILYYASKHTYGEAVNYWSILQAAGFILMMVGTTAHNNIAGFGERIIRITCCCFLDE NQAEQKIDDEEKKLDSSASSEEKKDSTVSNESEEKQEV" assembly_gap 101190..101289 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(AAHC03006478.1:1..3713,gap(unk100),AAHC03001742.1:1..17247, gap(unk100),AAHC03004794.1:1..5114,gap(unk100), AAHC03002137.1:1..13811,gap(unk100), complement(AAHC03007799.1:1..3040),gap(unk100), AAHC03007087.1:1..3372,gap(unk100),AAHC03016619.1:1..1578, gap(unk100),AAHC03002824.1:1..9275,gap(unk100), complement(AAHC03000377.1:1..43239),gap(unk100), AAHC03016457.1:1..1585) //