LOCUS DS113428 105673 bp DNA linear CON 15-DEC-2022 DEFINITION Trichomonas vaginalis G3 strain G3; ATCC PRA-98 unplaced genomic scaffold 1047229020010, whole genome shotgun sequence. ACCESSION DS113428 AAHC03000000 VERSION DS113428.1 DBLINK BioProject: PRJNA16084 BioSample: SAMN02953626 KEYWORDS WGS. SOURCE Trichomonas vaginalis G3 ORGANISM Trichomonas vaginalis G3 Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas. REFERENCE 1 (bases 1 to 105673) AUTHORS Carlton,J.M., Hirt,R.P., Silva,J.C., Delcher,A.L., Schatz,M., Zhao,Q., Wortman,J.R., Bidwell,S.L., Alsmark,U.C., Besteiro,S., Sicheritz-Ponten,T., Noel,C.J., Dacks,J.B., Foster,P.G., Simillion,C., Van de Peer,Y., Miranda-Saavedra,D., Barton,G.J., Westrop,G.D., Muller,S., Dessi,D., Fiori,P.L., Ren,Q., Paulsen,I., Zhang,H., Bastida-Corcuera,F.D., Simoes-Barbosa,A., Brown,M.T., Hayes,R.D., Mukherjee,M., Okumura,C.Y., Schneider,R., Smith,A.J., Vanacova,S., Villalvazo,M., Haas,B.J., Pertea,M., Feldblyum,T.V., Utterback,T.R., Shu,C.L., Osoegawa,K., de Jong,P.J., Hrdy,I., Horvathova,L., Zubacova,Z., Dolezal,P., Malik,S.B., Logsdon,J.M. Jr., Henze,K., Gupta,A., Wang,C.C., Dunne,R.L., Upcroft,J.A., Upcroft,P., White,O., Salzberg,S.L., Tang,P., Chiu,C.H., Lee,Y.S., Embley,T.M., Coombs,G.H., Mottram,J.C., Tachezy,J., Fraser-Liggett,C.M. and Johnson,P.J. TITLE Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis JOURNAL Science 315 (5809), 207-212 (2007) PUBMED 17218520 REFERENCE 2 (bases 1 to 105673) AUTHORS Carlton,J., Miller,J., Delcher,A.L., Schatz,M., Schobel,S. and Fraser,C.M. TITLE Direct Submission JOURNAL Submitted (23-MAY-2005) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..105673 /organism="Trichomonas vaginalis G3" /mol_type="genomic DNA" /submitter_seqid="1047229020010" /strain="G3; ATCC PRA-98" /db_xref="ATCC:PRA-98" /db_xref="taxon:412133" /chromosome="Unknown" gene <898..>9321 /locus_tag="TVAG_034130" mRNA <898..>9321 /locus_tag="TVAG_034130" /product="hypothetical protein" /note="transcript TVAG_034130A" CDS 898..9321 /locus_tag="TVAG_034130" /note="encoded by transcript TVAG_034130A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06234.1" /translation="MGNQGSASAQGATHISAFLNPGEPEIFAVSLFASTKEIKFEYKF SEDDKQEEYLDSFYIDIFTLYRNLTNAKNQDQVLQNIILPSVLKVLFKNDRVNNFVYQ LFKFDNDICNYFTDKFVETFQNDINQAIQLENTNNFDRYTFNTTISQELFCQNANEQL LPKFVKEICGKDIYMNAGTTQENKDITEIIQKMAQSSKNAEVIITEFLWAYLTGNIIL MIEAGCNSLRAQGSASTPSLNLPLPIIYSENLFKTNNIIGKFIIDELTVADRNPRSIT AFVSKNFFCMKQDRLLIIDMSEEITQRNFRFMELESPYKRKSVVELVLSKNILLLISN DNVKGLEIFPLGSKFCDVNYSNSKTKISRPFTSDGTFIYSYYKGNINVFTLQDDKLVL LNSLHLKKSNLQLLQPFNKDILPIGLTSRCLFCDGILLQFILFEKQVNDKYLHFIRSF SMLDGYHIGDQTVLLDFPIYSLNYDGYSKKIHTMSLFDNSGGVTQYKYEGPLSPNVTQ LLPGDLYFGDNLQKFLPLKISNLFWFPPFLLGNLILPLIGINCQNLLYKFPFYFKLLS GENLSQDILLAIPSYLSMINQQKDEKYFTCIKVLFCLIGINLEIEKKKQNEEFLNSLI FTAKILLEYKELNDFLISFLVNNFTNLFYGNEQFISPVFSLFFHNLTISQFTMIIEKL QNSVLYPFIISPQHYKLYFIPTLNNIVENSLKLRFVDEDFVVSFLTAVYRELLRFHMK KDVNPMIKTVSKEIFNLLFSLISSNLSLVDQDAKNMTFYAIVEKFILLLVPLCDIIDF ARDYTRKFIDLMQNLTKNNGLIKKKVTPEQDNFIFLFDKIFVCFVKCLTTLSNHTPSN IESFTKIYKLLKFNKRKSDIDFTFDRNIILETIHKNNPNPLNKVVKGKDKKFEIDLFL SLSLSFSQFENIVSNFPLYDPRLKSIVQAVYKIRNNLRESKQQTNSFDPNLNEERTLK QNYEKYFGMIEEKVTFLSSQKISVEFNEENLNILVDFVSNEQFLSVYLENEKEIEKIV DSLKSFLDGIKSFMKIENLPQSFLLCFLGYFSTQKNFITSAEVLRKLNLLNDEIISIV VQTISLFVNSIPMISAATITPLVINMLLIIQDIEKDELKWNIFVSLFTKLISCSSMIP TEQLKTSLILSFQAMQLFNDKGYLTIDKDKKSTMSDLLSNLPNNLSFDINLATMLVMS GFDAPIEKEDSLMMFFCNNDDFHVLMQYFYAIITKSDKNEEFFSVLFNFVGKVFCGAK TDILPDWLSQDHVSSFSLGRYCKTPEILFSIANEVLTLFRKILITETKAKDELTQFIT VKVMDRIKQKQSKIEEIVGIFILLSNNFVVLSKNVILDQNYFVLDINEENDEIKVIQL PLTNEITIQTLKLSEEYEIMSLLSFDVEMFPHFLVLLGLFTQVMNAPQSYSDSVLSFF VMNSLQSYLSDSDNGLSYTQQLSSTFTLKKFSDFEFRKFSSKVKVLLSLALSRESNGI FCNSPREPHLEHVSFCKYIFHSDFILTPNSIKTNRAMHCFMSTVLDSSVQSYFSCKLQ NQTNVIFGIIMHSIDLNQELCVLYSSAAKMFFLNMEPFLKNETTEDETIEFMFNPKTK KVGIASSRNKNRLGKIFLPDTRCSFFIIVPNSSAVEYSLSLTPKTPNMQKLNLTLKHL KSPSNVFGRLKNRIFGITSNDKFAEQEQSFSLIKSGVSSTENTKSNGFFSIMSGYHQT IVNNTATDLNISKCVKFSNLNINPTNSYLKMSISSFVYSQTRKFIFSSPVAMPFYFKV DPVSGQIQKVRQNDANIVGFQGCPPLHFENMCEMPNDVINTFIGGVCEAYKHEITTFI LTKLISSNFVNNVLVNFNFTSENLIDFVNHLLVIVEPFKYNNYEQSKSPIDFDLSVLD SNYSIPNNLYDYHHSLINLIEFIDDRFDTFKDIWFNYILKMFSSPQNHFVSQQNPYYV NSSLLINEDYKSDAAGWVCFDLGFGNILAPKIKGSVFPQNYEVDFVNYTFVPGNSISY SKKNCVRLPIFKNTNVSLFNTFFSLAIAMKYFVIFISKDKKSIFQWKSKSLAEFMSNI YMAILGRSPFFYSHSQEVLSFITNKLQIQAVDINDEYLSVINHVLPLCKTISNSFESF VRSHLDMRKEMELMNLSSYFPSWCNLRNMKMRNDAEGLKLPESILGKDMKKMLSQREF SIIQRILTVYKTLTDYPFYLIITDWLFSFITFPPTKFEILNQNLLKVTFTSNYIPYKV TLCASAPDVIKKTIRCATNSEMSNSFRISMNSDFSPPNKEFFIKFDESDVISNMKFYF FCSVQSADAANILLSNREKFENDIKVMYSQFNESDDQNILSLFPIERLQDLYNLSFAM NPIRFLELNLDKELHMICLRSRFLLAFNWYVYFHEDVVNESSFSQFSRFISVLTLTQK FRFFISKSDGPRTNVTINRQLGLSVRSGVSKKLSDSMIGQFARAYTSPRMFRSPTDPF HVTFEGERGIDCGGLSRDLASELAKDICDPNIGLFVSTPNFVNHRGSFRECIVPNPIS EWGRTSHIYESVGCLIAISIRTGMVQPFTFPPFFWTCLVTGEITIDDVFSIDNEYKDF VTNLEKDSKEKTPQQFQELYGNNHNKIKNIRGEEVSVFSFSSKSLNQGSAGRFISSAN SLRIQKLLTPLLLIRNGFWKALDLAPPPFVTPQLLEFLACGDRTISVSKLRALTEFQG APRKMIDIFWTVISRLSEQEKRKFLQFATGTTQIPSNAKYPFLIVDYNRVPAPDTNLP SASTCFYRLHIQEYSSAEVFHRKLLQAIEYTGTFENS" gene complement(9712..>10693) /locus_tag="TVAG_034140" mRNA complement(9712..>10693) /locus_tag="TVAG_034140" /product="Clan CA, family C1, cathepsin L-like cysteine peptidase" /note="transcript TVAG_034140A" CDS complement(9740..10693) /locus_tag="TVAG_034140" /note="encoded by transcript TVAG_034140A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Clan CA, family C1, cathepsin L-like cysteine peptidase" /protein_id="EAY06235.1" /translation="MFAFAALSRSVLTTQAEEKAFLDWMRQTNNIFVGEEFHFRKGIF LTHKRFVEEHNRKSSFRCGLNQFAHLTPSEYQELLGYKQMKQKEEVEFAPLKNFNAPD SFDWREKGVVNAIKDQGQCGSCWAFSSIQAQESQWAIHHPGELYDLAEQQLVDCVHDC FGCNGGNVGWAYTWVKLFEHGMFMLQKDYPYTAKDGKCAFDKSKGITKITTHKKASHD EEALKTSVAENGPHAIAIDAGHDSFMMYESGVYEDASCSSSTLDHAVGLVGYGVDGDK DFWLVRNSWSTTWGEQGYVRIRRNYHNMCGVASEPMFPVVE" gene complement(<15474..>16346) /locus_tag="TVAG_034150" mRNA complement(<15474..>16346) /locus_tag="TVAG_034150" /product="hypothetical protein" /note="transcript TVAG_034150A" CDS complement(15474..16346) /locus_tag="TVAG_034150" /note="encoded by transcript TVAG_034150A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06236.1" /translation="MLSILFECAAAGRSHRHRRYVPAETNGAGQGIVVNTNNGCWIRS GPGTNYERIGSAFAGNQFSVSGYSGVWWHVAFNGRSGYIHSDYLQVTGRVNSNIGVNV RSGPGTNYGRVGGLGNNALVTIKGISSNWFRIDQGWVCADYIALSGSPGPAPGPSPSG QVIRQGDPRFNSNIRTWGCGFMSLCWCGGVNSIDGCNNLYNTAIRNGWMRSDCFILSW DVIKPIAGARGYRPGGRNAPVGGNEKEILECHNARTSMHFVVGNKNGGIEYDPAVPGF VSYGDHTSKRIYIY" gene 17633..>18288 /locus_tag="TVAG_034160" mRNA 17633..>18288 /locus_tag="TVAG_034160" /product="hypothetical protein" /note="transcript TVAG_034160A" CDS 17845..18288 /locus_tag="TVAG_034160" /note="encoded by transcript TVAG_034160A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06237.1" /translation="MNKTNNKYEFLLHYPEMGADQYNWWCQSLSPTIQTEDNLQDENG TPVVLGYENVSVKFTIYNWGGLSLSKRSKESYINGDLRPDFWHYSIGSFGTEKGIPGP LHNYLSQVALYVKITSLDMIRCISCKVCRNFLYNFPEFLFVIIVS" gene <18881..20747 /locus_tag="TVAG_034170" mRNA <18881..20747 /locus_tag="TVAG_034170" /product="hypothetical protein" /note="transcript TVAG_034170A" CDS 18881..20674 /locus_tag="TVAG_034170" /note="encoded by transcript TVAG_034170A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06238.1" /translation="MSEKQYYRNLLLRVQDKIRSLGATNRNRWAAFCYNKSMTMAEFG QKMEKYNMTFEGNDLQVLWDSVGIEGDMNFTEFLKFMQTDVDEFQPVLSSRRQYPKEE PADLPPLREAYENPSYSGNRGYEKPSLGGYDDKSSYQDNDYGKPSYGSNPSYGGYGND RFANDDRFGGSKYDAQPAAPQSYSSNLASDIIHENLRDIVIGCMSKDSLITGEVSRSA FIDVCTKYGVPESTQGFGKILQIGDPSASGLIQYFLVAAKVCSESINLPPLNTNYSPN YVAPESNIRNSATRYNDYGGFSNEPVRSPISSPKANRYENYNSSAQKSSYDYNSPQTN QYDYNSPRAGSNGLRSPSGRSNYQAFSREEPRENIDQNDAPYYEYQPPQLVKTAMVDH GIFGESPYKPQTVQQRTPSVQPSPRPYTATRSQSNVNPDDVLKRVGEIIQGKPTHLFN KWRGYNTKMTANDLQRGLLREYDYNVPISTVEEICDRYGGELNLSNFVKLISDGAQLH SASSRSVSNYVPQSRKMTEDDQTIDDIAKQFVGQDFTALTEKARNADDLCIIFSRCGI NFDEARVKKLVSKQGKNGFVDAIAMRLNNVN" gene <21167..>27748 /locus_tag="TVAG_034180" mRNA <21167..>27748 /locus_tag="TVAG_034180" /product="Beige/BEACH domain containing protein" /note="transcript TVAG_034180A" CDS 21167..27748 /locus_tag="TVAG_034180" /note="encoded by transcript TVAG_034180A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Beige/BEACH domain containing protein" /protein_id="EAY06239.1" /translation="MALSNVDVIIQYFDSETEITKEDEEQLKIYFSKELNCRDFLSKC GFRLVVENLHKKNKLIALNTILPFIRTETLLSSLDSLITEDISAIIDMITVSNLPPEQ NITLIYLIFQGIQKIYKTRPTIIKDLTDSFNKYDEYIKTASIPILELYGYLINCSPKG ISWEMYNHLNKIYMDKECKSKCRTFILELLNNEKLFTETDAKIEHWIIPDILESEDCF RAFTSVANLYIANIITNSKRIVEFLTSNIIPPIKENICTEQILKYLLSLIVETKLTSD QFGDERFIQLIFDNQTPEELSNYLMNTKGILPLLKELFNSKRCNWSKGKTVDRLIDTL EHDKDNILTDFVFPIFTDNFCLSIVKTLLIHISNDKVFNYCKKYNSEEPGFYPYFSKF DCFSGLPFENIVFSMNFLLLMKDYVLEYNDHSFDDFVLKEPISSPVFKISRYVISKFL PEDEFSPLIFPSLLPFVDFNITTSLPSNKYLIGYYSIKVFHKLGNNLFDIKNLKQYIS RYIRTSDALYLLEQDYVKSVGLLSRTTEYGLYEFHSSLCKSYATFPTNLSSIVFQLFI EREQKDYPLFTISGEQFILKKDNILYIKRKKIVEIKSKTWMTIGIFKSDRSIDIYFDS QLATHINSRSIELTIGSKDQDNSGIFYLSECIAYNIPPSQLKSKTLDLKPSTIIEMKG NTIYVPCQSFNSIFFDKGNLQYLFDKIFETEDKKVIGFQLSFISQLPLFSKSLSDWFF KKFKRSLVSSIEKLDLSFLMLYAACCISSSDNSEEVSNRLSILVNDYNLWNICNHDLL KEFIKSLMSMLLNVKTFNWDIFYKNISELFFFILSNQSFNDLENSIFDFFNVILNNCC DNNSFRDFLQKTLSFNLLCKNFDRILTKELLINPDNNVKNEVNTNKSEIISKSEILMP TSEDEDNGCLLQSDMRFSELQEKLLRMVINIQSSKKSDLIRNHFRAYLSLHVSDGMKK KLLFTILEDEKFVSENLPIVIRGLQKVATDQSMWNKILTFLCRKEVTVDKCGKITSPH SLSIFLSLFRILFESKDEIFLLFISSIFSSNDFNFHALFTYPTFGYLVELFTNKDIDI TYEEFHNVDQLCQQDQQYIQIKNNYQFINFLIHKTKDKTTNESLDLQSDSSFANIDNK LSNMENLSKSEANFINSDSIHPPSISVSEPHLVFDNKEKRNLSQLYIQNCVKFISNFS IRLLTSDEKNFSLFMKTVILYGHKEITSKFISNVINLIWNSNDKYIKLYSDSLSFFYY NKKEEFYESNIINTLEDKLLNYPNKTKFFINNFREIYNDSNINKQIELQRIVASVQEF TVELFLFVLVVLRSKNIDASFNHLFFKKFQQKVSEWIHDEEFVHLTKNSNSFEDIISF DFNKFNNEFDIIEKRKSNKGDLCNLKTSAVFNEIRFLSFLYDFNEKISEYGITFFVSF YKNINFYNRKEEKHCIHYLQRKYSYLFSDVFSEEELNERTHSYFVSHLCLPIYFRMLI SRSPFRLPHPTEEKYQIRNVIPLFGFSEITNYSYKLSEYIPNYLVQYPFVVHEETTNK MKLFEEIYKIDENRTIQNCIFVRVDIRMKCIAIKKKTSIIILIGAEYVNDDIIFETPN PLFFDSLIQISLLKEIGKCSFFLGRVVLIVDDILQIEKHVILSNPYSITVYSTTGSSF ILEFYEEPIFEEIYKIKEFCLNKKEVFETWKQNKISTFDFLYQINLLGQRSTLDLSGY PIYPRIVKDMNKKYSFENRRDLSVVVQTSFDKTVQEDKLNKIYKMHKYHHSENLSNSI FVCMLNVRYSPFCLSLWELNDGWDKGDRVFRSIPFHLSVKQKTTLEITPDMYCFCELF DNKNNFDSLILEFPTWCKNSVDFIERHRSILESQTKTDIISWIDLVFGHKQTSIESFN VFNPLSYPVIDIDTNNNNNNSNFNFVDNQRHTWMMNCGSVPIQVFDQQIHIENNQQRY QYPSLSPEEYIDRSDVFVRYSLQRHSIDLYYQGCIVYSQHMKDVKSILLCENKLYFCV NTYDDYVHFYNITYNEHNKRATSFRFINKHHFDDVMFSIISKKEILVCTCTRNKVYFW CPSTSHVEHVLNLSCNCAFFDDEVGCIIFGTDVSVLFYTYNCTFIRSISTQSRVDCLL TCGHFSVSHRYLYIGNDDGFVICYECVEPDHSLFIMSADYVSNSPVTFLLYDEHTNTI HYK" gene complement(<28452..29696) /locus_tag="TVAG_034190" mRNA complement(<28452..29696) /locus_tag="TVAG_034190" /product="hypothetical protein" /note="transcript TVAG_034190A" CDS complement(28452..29564) /locus_tag="TVAG_034190" /note="encoded by transcript TVAG_034190A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06240.1" /translation="MKISFCILNYFVVLIISNIFMFYRKMKHFLSFFFDSGPNMDIWR LFYENSVITENHTENKILNPTEVGNYYVTKCFFNGIENIVINIDIADHTKLLISISGF NGTKTPSQTVYSRFGSCIVYRICVTKSIQSSSNDGVFLKSTITYLKSKNKIIIEDSTV FDCGDMDKGGSINFLEYGNLSYSRNNITNNKCKDDVSLQIYSDQRYNISQSSFIDNKA NSRCFYNLYSGPHQFYLCNIIRNNGNKCFNLWKVIVTFESCSIKNNNCPQTFYLYSSP NSATIINSDYDGQTTDNVEVQSPTNNIYNELSHLSTRLCEAKNKIENNFEEENDIKKF NNLKNLCTSVNFFRCQSHHILDISLISSYSIFSLIK" assembly_gap 31440..31539 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<32488..>33432) /locus_tag="TVAG_034200" mRNA complement(<32488..>33432) /locus_tag="TVAG_034200" /product="hypothetical protein" /note="transcript TVAG_034200A" CDS complement(32488..33432) /locus_tag="TVAG_034200" /note="encoded by transcript TVAG_034200A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06241.1" /translation="MINRKNSDWSEFYDDNNYSYYNGTIDYNTSYYIFNAVFSKFHDI VLLLHSSSSSSNILIESTLFHTNEAAGLGCNIHSSGLGSIIQKRICAYNCTNKGIGQH CYILNWDSSISKNYNIESSYLNLGNSIGQSTIYHGSGEIIIKRINISCSKTDSGSVIQ LGQTNYEGNITFSILNRNTASYQHCLRLNSNKPYSIINCDIKNNTVLNQFIFAESGEF TFKDCIIIKNNAVNTFYGVESSKSILIHCYLEINGTFEFVEIESLSASSFENELYFFK TAECNVEKDLLEMNLHSKLISLFKLMLCKLNLIPTLLK" gene complement(<33697..>34686) /locus_tag="TVAG_034210" mRNA complement(<33697..>34686) /locus_tag="TVAG_034210" /product="hypothetical protein" /note="transcript TVAG_034210A" CDS complement(33697..34686) /locus_tag="TVAG_034210" /note="encoded by transcript TVAG_034210A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06242.1" /translation="MIVFLIIQSIAISYNWKLFSSDYRSKIKLEWHEFYEERNNSFYN GNIAGNQRYYILDIVSANSNRRFLSYESRSGSSVFCNNSYNGQGCNIYIVKGNIVQKR VCSFHCSASGYGQHCWIKNQYTELEKNYNIESSYTHFGNSRKGAPICHSYGEVIIKMV NISYCMIHETSGLWLEDMQYNGNVTYTLFSSNNARDDFCLKLSHSSSYKIICCQIINN SVSTYLISANRGTFTFINCTIIKNNATEILYIARTGDFKFFNCTIDCNVPSRFIHSDD KLDSFSFENELIHIGTEGCYPKFSLKYQKTRQIDLTRSLLKNPGSKSHSLFRK" gene <35536..>36465 /locus_tag="TVAG_034220" mRNA <35536..>36465 /locus_tag="TVAG_034220" /product="hypothetical protein" /note="transcript TVAG_034220A" CDS 35536..36465 /locus_tag="TVAG_034220" /note="encoded by transcript TVAG_034220A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06243.1" /translation="MATHFNFGQYSIINNENVDDENTQINSTSVTFRYPCTNKQNCSG FEIKLKVGHYLFEVFGAQGSQDSGSQKGGLGGYGSAEITITKTIPLYLFIGSQGKWTD DGQSEASFNGGGCGFKLGPGGGGTDFRMSENDLGTRFLIAGGGGAQGGYFKSEVPDYI DSKKLHEYVELQGGFGGGEKGRKGGETDIEGGTQLGGGHGYLNGSFGSGCEFHRIGIH GGSGGGLFDGGCGEKDGASGAGGSGFFYSENRPSEISEIKDIEISNGNLAEGKNSGDG YAIITLLSASSNDYVKRHGFSPFSVLTCILKHL" gene complement(<36630..>37616) /locus_tag="TVAG_034230" mRNA complement(<36630..>37616) /locus_tag="TVAG_034230" /product="ankyrin repeat protein, putative" /note="transcript TVAG_034230A" CDS complement(36630..37616) /locus_tag="TVAG_034230" /note="encoded by transcript TVAG_034230A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY06244.1" /translation="MTESFLNEIMNHTVTKKYSKQDIMHILDNSVLNFDQATLLIYEV SETFSQADIFNLLKHISINFNSKFEALQSFLVLLSIKLEIPFFKDLSTYLQDNMNAKS QVASAIQEKINLLTNQNNAILSQISVQLNSLKNATVSAEPKEQKPQPTKISNENIKQL MQYEKDKSHYAYIYKILEKSASENDKEALKFSIDSKYAEITDDFLDNMLLKAADLNNL QLARYLVELGMDPNVTNRGSLTPLHYFCRNGNLEAAKFFCSLKGINVNAKHYQGWTPL HYACFESNIPLVEFLVTVDGLRINETDNYGNTPYQSPTSPKVKEILSSKGGK" gene complement(39110..>41102) /locus_tag="TVAG_034240" mRNA complement(39110..>41102) /locus_tag="TVAG_034240" /product="hypothetical protein" /note="transcript TVAG_034240A" CDS complement(39138..41102) /locus_tag="TVAG_034240" /note="encoded by transcript TVAG_034240A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06245.1" /translation="MGARAGPPDGSEESKKEWGKYEYPGDVKHMKCHNCFCAIVFLIL FGCMIALLVIGVLRAKVWTLTKSWDTHGFYCGFDNSQLNIKGAPEGLVKPNLVDYPYL FFDALNVTRQICVSKCPTNGDLQAIIKHNVTKSENVTYLDNTTYNTNYYPDANETYEY KTTVVFNRCIPEVNLEEDLINGTQFIDGLKQALDAIPALSSALNSVFNLKWQILACSA ASLIVGLVWIMLLRCITGCIVYFVVMLVPIALIGFGVWLFMKGSLMGTISEVVKTKKL TGSQITAVIVWVIAFMVILIIIFLWSKLKSTVAIIKVAAKALGHNFMVIFVPIITMIF AFLLWAALLVSSVTLYTSADFKYWVDDDGLDKGIGQIKFDLNKVLQYMLIYNFVYLVF ISVHMYFVNYYASSVTLVKWYFTGQEGKTCCGCTCFYGFWLAWTKGLGTITISSLIMT PLYLFIIFMEYLDKKSKQEGAPIIVQFLIKCLKCCLWCFTKIVQYLNKVLFTIQQIFN TNWGPSAKLVIDVVVSDTLLTIMLNGISFFILFLSKVVVSIITTLGFMIWVYYVKKDS IAGSILAAAAVFFLSYIVSSFLLSAFDNIIDIVFVCYQSEKSIPGYEAGDASKMVNQT ITDMKGAHENANTSSKVSAEKLEDENEMKE" repeat_region 42463..45822 /note="virus-like, repeat family R371,R1794" repeat_region 45855..47462 /note="repeat family R1479" repeat_region 47839..48375 /note="repeat family R105" repeat_region 48380..49186 /note="repeat family R105" repeat_region 49215..50450 /note="virus-like, repeat family R105" gene <50518..>50907 /locus_tag="TVAG_034250" mRNA <50518..>50907 /locus_tag="TVAG_034250" /product="hypothetical protein" /note="transcript TVAG_034250A" CDS 50518..50907 /locus_tag="TVAG_034250" /note="encoded by transcript TVAG_034250A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06246.1" /translation="MSGLKEELDPFTYLNVYFYHFEKSSFDKVWNIEPVKFAIVTKNG AKFEDLDIEGLLTVKESFDRRFSNLKEGKAYKLVIPYEPKKADDYEYYESKVVEVQGK LGKKILESKPVFAPKEEENIDIDPEMF" gene complement(<50924..>51376) /locus_tag="TVAG_034260" mRNA complement(<50924..>51376) /locus_tag="TVAG_034260" /product="hypothetical protein" /note="transcript TVAG_034260A" CDS complement(50924..51376) /locus_tag="TVAG_034260" /note="encoded by transcript TVAG_034260A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06247.1" /translation="MSSDFAIYIRDKLFDSKTSVDHKILHSVNKKGEFVLKFCFWEYD KNHKTLSRAVLKFVNDRLVDRDDASWRDEVQQNFLECKEDTCAVLENEIENRIEELLK DKDLLQKYGSEKFDITPPEKKKREKKEKKVEEEKKEPEPVPEKKKFDM" gene <51413..>52288 /locus_tag="TVAG_034270" mRNA <51413..>52288 /locus_tag="TVAG_034270" /product="hypothetical protein" /note="transcript TVAG_034270A" CDS 51413..52288 /locus_tag="TVAG_034270" /note="encoded by transcript TVAG_034270A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06248.1" /translation="MLEKKFADIDKKFENVLNKNKRKLENAQIKLIHDKFLFAQNGIT GLIAPPGSGKTFTYLKMAAQQQELDEKNPFYELVVICSTSGQFDQTVNSFKDIIKKSK LVCIKDSELLDWIKKYQRRVLKYNAINEYINSKFKDPNEEMQRILEKKHFRNKQKEIE YISKKLQSYDWKTYPHRCLLILDDFASHPLLKNREQDMCRILKKLRHFNISVVICVQT AKSLSKDVKRILTDIILFPGLSEDDFMELMKESMAGKFDRHELWEKYKVIQDPHTSFR IHIYANKVQIVKSQA" gene complement(<52590..>53396) /locus_tag="TVAG_034280" mRNA complement(<52590..>53396) /locus_tag="TVAG_034280" /product="hypothetical protein" /note="transcript TVAG_034280A" CDS complement(52590..53396) /locus_tag="TVAG_034280" /note="encoded by transcript TVAG_034280A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06249.1" /translation="MSTTENTTTAIVHEAIDEEYEWVQYNKQLRLIRSVKDDMYQMQS ILNALRSTKQARHWFENQQTKELLEEFPHMFATGRKPRVEIPYENRQNLPNGLRGWYV HRLLVNAVAMWASPRYACYIFMMLDEIHRQEREELENKLESKDKTIQKRIPRSVPKGK EKNYKYMIYTEEMENEEDRDMVMLHLVRRNNKSFYDLAKIYKSNRNWFYRENLPISMT PNEDVKQIVQDTLPQTHYDMKGCTILTFKEDLPLLKEKITEYFDNFKQAE" gene complement(<54183..>55097) /locus_tag="TVAG_034290" mRNA complement(<54183..>55097) /locus_tag="TVAG_034290" /product="hypothetical protein" /note="transcript TVAG_034290A" CDS complement(54183..55097) /locus_tag="TVAG_034290" /note="encoded by transcript TVAG_034290A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06250.1" /translation="MLATTTPNSLVMNPTSMLVEMKSFIPSSYTFETEIQKIKQELLQ GDLNCSAKDETNEQYLYEMQDIIDHLPKLPEIQQQKLTIPEFDEIEVKATDSVEIKKF IRKVNYEFLGFHCNHKVMDKDCDMLYKNISDIYKSVEFKTYDNFVSLVAECVWQIRDE DRRGKVWNQQIKPATFELKKTIDALVVLAGKVSEYNAKMNPQCSKCKAAMRKYNYSVK EIERMRNDYADLKKEAEKPAEDKMDMLTFLNKNYPTADDFLLSDVKKKYKETFGIVKT FDVLTEEIEATKLFRISNIHRTIHVRRL" gene complement(<55355..>56041) /locus_tag="TVAG_034300" mRNA complement(<55355..>56041) /locus_tag="TVAG_034300" /product="hypothetical protein" /note="transcript TVAG_034300A" CDS complement(55355..56041) /locus_tag="TVAG_034300" /note="encoded by transcript TVAG_034300A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06251.1" /translation="MAKHSQKALISLCIEVLRRDKDGYINATKMAREAGKLNHLNRFL NSAKMQEILEFWMNEYGRAKSGSTSKQAFCEEYTNRKNFDGCFLYKVHAGIPDEIKQV RGTYVDPRLVNYIAMWASPKYCIAVGKILDSIDKKVHEKLDEEELEDTVENAKPLFEQ EVRKMCEKQIEHEREICYGYRDSPYELDQWEQEDLKREFREYELAKIALEAAEKKLKA WGCFVQKYCE" repeat_region 56431..56796 /note="repeat family R23a" repeat_region complement(57000..57860) /note="repeat family R321a" repeat_region complement(57915..60053) /note="repeat family R31b" repeat_region complement(60099..60683) /note="repeat family R31b" repeat_region complement(60703..60855) /note="repeat family R31b" repeat_region complement(60875..61276) /note="repeat family R31b" mobile_element 61293..62252 /mobile_element_type="transposon:transposon-like, repeat family R11b" gene complement(<62249..>63484) /locus_tag="TVAG_034310" mRNA complement(<62249..>63484) /locus_tag="TVAG_034310" /product="hypothetical protein" /note="transcript TVAG_034310A" CDS complement(62249..63484) /locus_tag="TVAG_034310" /note="encoded by transcript TVAG_034310A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06252.1" /translation="MSKETASMREIQHNRQLIIQALNKNTTNFSNYSKISESLKEGNL KLTLNPMTDEFLFQDKKNNTVCINPTKGTLNEKPIKELLLKADVDNKADKEYVIEKVQ EEHDRADATYATKEDVEKKADKTYVNDELACVASALVKKADKEYVDEKENEIKERVEW YNERTTKILKTKADTGWVSGCLDLKADKNHTHTSFTTFTADDIILNFDLGSSAPSENP STSVKDTLNNLDNSCRNIEEHARNFEAYELPTMLDKKADKTELQTLKTEILQTLYPIG SIYTSMNSTRPEVVLGFGTWTQIVDRFLYCANSSKETGGSKTISGANLPAHSHYVSLT TSREGGHRHKYWDWSGMTKGKGYDVKNNVQFAINCFLSNTEVGGDHTHFVSGYTQTTG QSKDYMPPYMTVYAWYRNA" gene <63503..>64351 /locus_tag="TVAG_034320" mRNA <63503..>64351 /locus_tag="TVAG_034320" /product="hypothetical protein" /note="transcript TVAG_034320A" CDS 63503..64351 /locus_tag="TVAG_034320" /note="encoded by transcript TVAG_034320A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06253.1" /translation="MLSIEKENSRVATTKPLDELFTNVGQKFETETVKHEGYRFDYPL RWLRDPSVTKAIGFRRMKFISEAIHGFPFTVGFEVRYYNKEKRTYEKFEQGKLLQVNL LVNLETTLQAFQEKINDIYLEYAKQYNIDEGEYHLDIIYDRKNATVKINRIEDLGENV YISTKYNNLAWYRFLRMLNQPAEYPVHPDFYEVENPNGTYENVFDQDAIIVHASFSGA QNSFLCLANDFYEKPTKLYEPPSGSISDFQVWFTTDGRKRIIPLYHAFYLELSFIYNY YRTVKI" gene complement(<64356..>64598) /locus_tag="TVAG_034330" mRNA complement(<64356..>64598) /locus_tag="TVAG_034330" /product="hypothetical protein" /note="transcript TVAG_034330A" CDS complement(64356..64598) /locus_tag="TVAG_034330" /note="encoded by transcript TVAG_034330A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06254.1" /translation="MGFFSSIGNFFRNVGRGIWNGIKSVGRGVWNGVKNIGKRVGQFV GIIPKDPEPEEQAPVIQQPEPAPQSSWQPNPTPQPY" gene complement(<64617..>64979) /locus_tag="TVAG_034340" mRNA complement(<64617..>64979) /locus_tag="TVAG_034340" /product="hypothetical protein" /note="transcript TVAG_034340A" CDS complement(64617..64979) /locus_tag="TVAG_034340" /note="encoded by transcript TVAG_034340A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06255.1" /translation="MDAQNLANAQQPGQPNPENIPNEVRIQTAMANYGQVPTDVQMQT AMSNDAALGLPPWYANMRWKEFYTNPEVGYKQLYADDANTGVDPEYVFYQRRNRMYEL QLKNAMELNRKRKRLGGH" assembly_gap 68212..68311 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <69184..>70425 /locus_tag="TVAG_034350" mRNA <69184..>70425 /locus_tag="TVAG_034350" /product="hypothetical protein" /note="transcript TVAG_034350A" CDS 69184..70425 /locus_tag="TVAG_034350" /note="encoded by transcript TVAG_034350A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06256.1" /translation="MQIISVIWIGGGCFGSNGPYITSIIASSITIILIISICIRARVY ASYKSMKPIEINIMFAISSYIFPILTSFTTNCVGSTIYNFVKGNVEAVQVVGFILAII AFFVQVYMQYNFISPRVMFLHDVMLMWTPGSAALVTFALEINSALFTATIQSDKISST VELAVIFIISYVIGIYLFLDSMFLNKIYGNIFCSMLISNGSSSILNIVALYTKIDYNI LFFIIIIFVILSYLILHFMHSKFSQISMVRLDSASQDEYFYGRSDNLARDVRRSLDYC SPGIFMFPIYDQFLEENNDIKDMLFVYVRIVSAFPSYKYKLEVVDDYLKKSSINCRSL LNFQVQLLLCHRNTAATSKIVKKFDSIDSISKILTSNTKKFWENVLHGNTDAFWPSLL TCDSLSREMSKEISQLVNNYI" gene <70463..>71032 /locus_tag="TVAG_034360" mRNA <70463..>71032 /locus_tag="TVAG_034360" /product="hypothetical protein" /note="transcript TVAG_034360A" CDS 70463..71032 /locus_tag="TVAG_034360" /note="encoded by transcript TVAG_034360A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06257.1" /translation="MLEKGIPAHKDRALLNMISLFPNVMNSISDLTKEIDIVGNSLNN EEADINELNKKEVISDLINNSKLGNYAYVIIYFIVVCVLSIAGFCIYTLIFKYKVLDN IADSANFLYQADSMLHHYSNYLFLKVMNYAYNKAPNSIFSNSDTQMNKISPFWYKSGH AKKIEINDETVANNIGIILLYVAVNGLGS" gene complement(<72103..>73233) /locus_tag="TVAG_034370" mRNA complement(<72103..>73233) /locus_tag="TVAG_034370" /product="hypothetical protein" /note="transcript TVAG_034370A" CDS complement(72103..73233) /locus_tag="TVAG_034370" /note="encoded by transcript TVAG_034370A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06258.1" /translation="MILSCAPLTMMQLQDIARTTLTNAIQSQMMNQINYVPMNLFELT ISHAIILVKECKRISMTIEACNIFKSANVQNTQANPRVVQLVKAIEMILEAPSTKSIF EMIDSIFKQNAIINEENLNVISENEKLRRKVHKKTEKLEKAEHTINNLSQILSDIQSQ EHEELRNRLLFQTREIQEQRDLINRLESEKANNPNNKSSKNSTNQNVKALKKMKKSSK DFDKIYDLISKCVTEKDKEAIKYAIEHEYHQVSKDGSDIMIQAAGSNNFLLCKMLHEC GADANSKDSGNWTVLHKFAEKGNIDAIRYFSVFVDVNATNRLNWTPLHYAAFYDFPQI VEYLCSFPQIHVNETDNSGATPLRFAKSDQVKKILRSHGATA" gene complement(<75508..>78798) /locus_tag="TVAG_034380" mRNA complement(<75508..>78798) /locus_tag="TVAG_034380" /product="hypothetical protein" /note="transcript TVAG_034380A" CDS complement(75508..78798) /locus_tag="TVAG_034380" /note="encoded by transcript TVAG_034380A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06259.1" /translation="MLEDELQSTKQKLKVTESQLSRSPKWSPSQKHESELQFLKARHQ AELDSLNTKLFEKDQEIDDLKRKCCTNNPDITSFITFATKSIQLAIEKGITNDQKDLI SQFEITLHDFQSFLTQASSLQRFFQTMRSLIKVLVDTNVVLNTQKQEREASQIFTLQK KLTSLKTDQESKTTEIEDLKQTNQKLLISVSQLRDQLSITSAELDSYKNQANLQTTTL NELLQKMKIFSSPSKFQISNDFFEIYKKVDSSVSRLLRIKEENDTYKSVFTDFIEKSL GIKTAAFSDKVFEKVTEKMNNQASTLIELSKTFSVDYTTNEQLIRDVKEIKNNLNLTK SKTEKENDQLTRVVKDYTEQISDFQSKITKMESDLKDLQLKNENLTNQNNLLTHQREI SLQKDEKQQKDFQEKEKSYQKQLENLNLVISKSKSDIEKNQIQIKELNDTIETQTSKN EQCNQIINNLSDDNKKLTKQIQEFVIKNNQQMDTLAQNKITIETQNKEIEVLKVFKDE SEKVTEENNELKLQLESVEKENKNIKTQNMKYKNLLDQFTNKVKTNKTQINDLSNENK SLKNKLDTTTNDLNTMSVNYQSILQNVSETTKELNLLKEENTNLKQNLFNLTNKNKNN ENLIENLKNQVEIASSTIAKLNTEKEQLLLQLNSSQNNEKNISSNLQNLQKEIEKTKS LNNELNERISNMTNEMLKLHESDAQGQIAIEELKTTKDNNKKLSEQIQNKNDEISKLN ADLLNIKSEISKLSDVINKVTNENQQLKNDIEQRDIFITNLKDKKKESNLLEKKLNEA TFQLEDTKERLRKVTLQFDEMSKVRNKEIQDSQTMIAKLTKILDKRQNKLSQLKQLLK QTINENNKLQNHIQIIEKENQNNFEKIQKLQSSTVSSSDYEDVKQRLMQTQTELNKKE KDILSKEREISKSSKQSRIIENQLKNLENCKSIVGRINSICLSSSRLSLDSVINELQP LFDLFSYPSDYKLNTKLNLSLISRQIFSNYGENGELFTKQHRQMLQQVMNKLLQFPTN SAFPHKGESLIDKLNSMNLIVDEVRQQFDAMEKNQNRLDAIVSSQHSAIVKMNQYMKS PLPSPMKN" gene complement(79363..>80255) /locus_tag="TVAG_034390" mRNA complement(79363..>80255) /locus_tag="TVAG_034390" /product="hypothetical protein" /note="transcript TVAG_034390A" CDS complement(79410..80255) /locus_tag="TVAG_034390" /note="encoded by transcript TVAG_034390A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06260.1" /translation="MTLQHPDSCKGGNTIPVDKDGRPYHFGCTGAEISNDFLITTDYY LAEQIAKLFEEKEPFCFRSNRGYTTFTGHYKGKRLSICAFGIGFAMIDFLVREVRTIT QGKLTFIQLGAAPSPAGHANGTAINVKDCVAYELDFNEFGGNTETPYRFFKKPVPANE KLLAALNEGLKAANIPTVEGRVASNPSFVSGVNSPALPQFDFKQSGLLAKVEAELGKI DSLEMDTYPLYWTALREVNHQIEAACVTVVNSDAKGNAMNIEELRKRQLEVAAVILEQ LGKLQ" gene complement(<86543..>87082) /locus_tag="TVAG_034400" mRNA complement(<86543..>87082) /locus_tag="TVAG_034400" /product="hypothetical protein" /note="transcript TVAG_034400A" CDS complement(86543..87082) /locus_tag="TVAG_034400" /note="encoded by transcript TVAG_034400A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06261.1" /translation="MNGTHGGSGGGLFGGSCGKDNGASGAGGSGFVYSNQKPNQINEI KDIEIQNGNLSYGINRGDGFARITLLSPIKLTDYLYNLRIKKINHLTAILKSKSNHSS FCYQISLSLFFGRNCILSWPIFFFNLLLQLNRKHSPALEFLNESNISCDDVTSAKIAQ KRLFNIEFAYLCVFEKIWS" gene complement(<87223..>87852) /locus_tag="TVAG_034410" mRNA complement(<87223..>87852) /locus_tag="TVAG_034410" /product="hypothetical protein" /note="transcript TVAG_034410A" CDS complement(87223..87852) /locus_tag="TVAG_034410" /note="encoded by transcript TVAG_034410A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06262.1" /translation="MSNEIKFGEYSLLNSELFNNPECNDSSCKFIYPCSDKQTCSGFK IQLKPGHYLFEVYGAQGSQDNSYTSASHKGGLGGYARAEITIRKKIPLYLFIGSQGDW TDEGPSGKSFNGGGPGYNSGPGGGATDFRMFENEIRSRFLIAGGGGAQGLYHKIISGD NPYFDGGTERTPYTPRTDPPVGDVVVVNETKSPADELAIPLLLLKNLWN" gene complement(<88864..>89991) /locus_tag="TVAG_034420" mRNA complement(<88864..>89991) /locus_tag="TVAG_034420" /product="hypothetical protein" /note="transcript TVAG_034420A" CDS complement(88864..89991) /locus_tag="TVAG_034420" /note="encoded by transcript TVAG_034420A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06263.1" /translation="MSVEINFGEYSLLNDELYDYTECNDSTCEFYYPCDDKEICSGFK LNLKPGHYFFEVYGAQGSQEDHDISESQGGGLGGYARAEITIRKKIPLYLFIGSQGDW TDEGPSGKSFNGGGPGYNSGPGGGATDFRMFENEIRSRFLIAGGGGAQGVYYNFNDES DLEPEEPEDPEEPEKPDTDPELEPEKPDTDPELEPEKPDTGSELEPEKPVKPDKPNTR SVRSGSKLREIEMISYPGGYGWGDSGANGSFPNITGGTQYSPGDGFLNGYFGRGCAFH SNGTHGGSGGGLFGGGCGKNKGASGAEGSGFVYSDQRTDQIFEIKDIEIKNGYLTYGI NQGDGFARITLLSPIKLTEYHYNFKNKKINTLTIFIFINKK" gene complement(<93167..>94195) /locus_tag="TVAG_034430" mRNA complement(<93167..>94195) /locus_tag="TVAG_034430" /product="hypothetical protein" /note="transcript TVAG_034430A" CDS complement(93167..94195) /locus_tag="TVAG_034430" /note="encoded by transcript TVAG_034430A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06264.1" /translation="MTNPFILGADNYNPFEHDDEPLKDPEMNNNQVQKQENNSISQEV TNNQNVSEPKEPETKKTDTNTTKKSDSIISQTINLMKNTKNGYKDPATGIYITEEEMT RKEQELAKREALIAKREQEIEEAKANGTYDQLNTHKRNFPIYLNWYAYYPDEDLPEDS LPIVKQKMILIYVGSILLILNFIGCLIILFWAGSAVKSPAASIVFSLLFIFVGIPLLF ELSFFTLYNALKLQKSLKFIGFLVADGIFIIFMFLLALGFLDYGSIGFIVSIDCLSKV SNKFAGVYCIIWSICIAAYIVITSLLWIREYRYFTNLNSSKNLQFLHLNMQIHLTSVN MSKTIFHL" gene 95731..97108 /locus_tag="TVAG_034440" mRNA 95731..97108 /locus_tag="TVAG_034440" /product="beta-tubulin, putative" /note="transcript TVAG_034440A" CDS 95738..97081 /locus_tag="TVAG_034440" /note="encoded by transcript TVAG_034440A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="beta-tubulin, putative" /protein_id="EAY06265.1" /translation="MVREIVHIQAGQCGNQIGAKFWEVISDEHSIDPTGSYHGDSDLQ LERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGQFGQLFRPDNFVFGQSGAGNNW AKGYYTEGQELCESILDVIRKEAESCDCLQGFQLVHSLGGGTGAGLGTLLLNKLREEY PDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKL TTPTYGDLNHLVSMVMSGTTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFIVGFAPLTS RGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTASAHFRGRMSSKEVDEQMLNI QARNTSYFVEWIPSNVKSAICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYAR RAFIHWYVNEGLETVEFDEARSNMTDLIQEYEMYETAGVEEQSEGEEDEEGEAAA" assembly_gap 98524..98623 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <103098..>103532 /locus_tag="TVAG_034450" mRNA <103098..>103532 /locus_tag="TVAG_034450" /product="hypothetical protein" /note="transcript TVAG_034450A" CDS 103098..103532 /locus_tag="TVAG_034450" /note="encoded by transcript TVAG_034450A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06266.1" /translation="MSDYIYYDSFPERFRELFKTQVKLRNMHFNKDRPIDDERNPEYI TIPYDAKFIAYIPYGRRGTKTISTKNKNYFWSDEENCLIYINAYLNKATYCTKEGWTG FELYIYDDDGNRRCVYPYDNMYHCFHQALNEYIVSKGLIPAE" gene complement(<103699..>103935) /locus_tag="TVAG_034460" mRNA complement(<103699..>103935) /locus_tag="TVAG_034460" /product="hypothetical protein" /note="transcript TVAG_034460A" CDS complement(103699..103935) /locus_tag="TVAG_034460" /note="encoded by transcript TVAG_034460A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06267.1" /translation="MTNKVTEAMKQKFLVEYIKSGTIPEGFYIHTMKDGRVQFRKIKQ PLDREGILRKIKLHEDNIAELKKKLEELEKGREL" gene complement(<103985..>104425) /locus_tag="TVAG_034470" mRNA complement(<103985..>104425) /locus_tag="TVAG_034470" /product="hypothetical protein" /note="transcript TVAG_034470A" CDS complement(103985..104425) /locus_tag="TVAG_034470" /note="encoded by transcript TVAG_034470A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY06268.1" /translation="MSSSSSSREPSPSVKQTLPNDYGAPIEYFLRAAQWQRAVSPRLG VPLAPVKNSIWSSPYIKYGLPLGLLATAGAVMMLKRNKANVVNNTEVAEVKQTPTPSQ AKPSMTPEPMEVQTPVQKSTPKPTPTFKPEPTPQINRKTPAFPY" repeat_region complement(104456..105648) /note="repeat family R488b" CONTIG join(AAHC03000754.1:1..31439,gap(unk100),AAHC03000548.1:1..36672, gap(unk100),AAHC03000805.1:1..30212,gap(unk100), AAHC03003516.1:1..7050) //