LOCUS DS113388 116982 bp DNA linear CON 15-DEC-2022 DEFINITION Trichomonas vaginalis G3 strain G3; ATCC PRA-98 unplaced genomic scaffold 1047229024211, whole genome shotgun sequence. ACCESSION DS113388 AAHC03000000 VERSION DS113388.1 DBLINK BioProject: PRJNA16084 BioSample: SAMN02953626 KEYWORDS WGS. SOURCE Trichomonas vaginalis G3 ORGANISM Trichomonas vaginalis G3 Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas. REFERENCE 1 (bases 1 to 116982) AUTHORS Carlton,J.M., Hirt,R.P., Silva,J.C., Delcher,A.L., Schatz,M., Zhao,Q., Wortman,J.R., Bidwell,S.L., Alsmark,U.C., Besteiro,S., Sicheritz-Ponten,T., Noel,C.J., Dacks,J.B., Foster,P.G., Simillion,C., Van de Peer,Y., Miranda-Saavedra,D., Barton,G.J., Westrop,G.D., Muller,S., Dessi,D., Fiori,P.L., Ren,Q., Paulsen,I., Zhang,H., Bastida-Corcuera,F.D., Simoes-Barbosa,A., Brown,M.T., Hayes,R.D., Mukherjee,M., Okumura,C.Y., Schneider,R., Smith,A.J., Vanacova,S., Villalvazo,M., Haas,B.J., Pertea,M., Feldblyum,T.V., Utterback,T.R., Shu,C.L., Osoegawa,K., de Jong,P.J., Hrdy,I., Horvathova,L., Zubacova,Z., Dolezal,P., Malik,S.B., Logsdon,J.M. Jr., Henze,K., Gupta,A., Wang,C.C., Dunne,R.L., Upcroft,J.A., Upcroft,P., White,O., Salzberg,S.L., Tang,P., Chiu,C.H., Lee,Y.S., Embley,T.M., Coombs,G.H., Mottram,J.C., Tachezy,J., Fraser-Liggett,C.M. and Johnson,P.J. TITLE Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis JOURNAL Science 315 (5809), 207-212 (2007) PUBMED 17218520 REFERENCE 2 (bases 1 to 116982) AUTHORS Carlton,J., Miller,J., Delcher,A.L., Schatz,M., Schobel,S. and Fraser,C.M. TITLE Direct Submission JOURNAL Submitted (23-MAY-2005) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..116982 /organism="Trichomonas vaginalis G3" /mol_type="genomic DNA" /submitter_seqid="1047229024211" /strain="G3; ATCC PRA-98" /db_xref="ATCC:PRA-98" /db_xref="taxon:412133" /chromosome="Unknown" mobile_element complement(943..1773) /mobile_element_type="transposon:transposon-like, repeat family R289a" gene <2144..>2311 /locus_tag="TVAG_332730" mRNA <2144..>2311 /locus_tag="TVAG_332730" /product="hypothetical protein" /note="transcript TVAG_332730A" CDS 2144..2311 /locus_tag="TVAG_332730" /note="encoded by transcript TVAG_332730A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07948.1" /translation="MGEAEAEYWQRAVAVGECWQRVVAVPRCWQRAGVEEEYWQRVGV EEECWQRVVAV" gene complement(<3754..>4134) /locus_tag="TVAG_332740" mRNA complement(<3754..>4134) /locus_tag="TVAG_332740" /product="hypothetical protein" /note="transcript TVAG_332740A" CDS complement(3754..4134) /locus_tag="TVAG_332740" /note="encoded by transcript TVAG_332740A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07949.1" /translation="MMLYRGEGDSTNNIAESHFHQLKQTFFLGKKNERIDDIVITLIT VVIPNAIIKVQVANVLNEERAVRILTRAGNQIVEQRASKHDECLKLIQHILEIVESRR IEPNVLIPSLKAILNLAQRSLKEE" gene complement(<4163..>5005) /locus_tag="TVAG_332750" mRNA complement(<4163..>5005) /locus_tag="TVAG_332750" /product="hypothetical protein" /note="transcript TVAG_332750A" CDS complement(4163..5005) /locus_tag="TVAG_332750" /note="encoded by transcript TVAG_332750A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07950.1" /translation="MGSHYASKFYQKWIELYIKNGGKQFLAQKAFFDKFGIDTNNKET MKLFAQSTDALKHKFYRLDEIIAQRLSNNPYTSLEAFLNNLQEECPDDLVQFDYNGDF SEFTIIYAPFAAKELVHSIDNPLHVDSTHSLIKGKIQLFAVTMKTSQNTIFPFCYFLV NPQTSEKIQECLVKFCEFAHLDPQHWSAGCALNIARAIEDGFPLAQLSWCAVHVLRAC AKVGSYFDNPQNFENFYLAMDFLTLRADATNAEKLAEESDETYEFLTNNVRRRRTARF EVFR" gene complement(<6856..>7092) /locus_tag="TVAG_332760" mRNA complement(<6856..>7092) /locus_tag="TVAG_332760" /product="hypothetical protein" /note="transcript TVAG_332760A" CDS complement(6856..7092) /locus_tag="TVAG_332760" /note="encoded by transcript TVAG_332760A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07951.1" /translation="MTTKVTEAMKQKFLVEYIKSGTIPEGFYIHTMKDGRVQFRKIKQ PLDREGILRKIKLHEDNIAELKKKLEELEKGREL" gene complement(<7141..>7383) /locus_tag="TVAG_332770" mRNA complement(<7141..>7383) /locus_tag="TVAG_332770" /product="hypothetical protein" /note="transcript TVAG_332770A" CDS complement(7141..7383) /locus_tag="TVAG_332770" /note="encoded by transcript TVAG_332770A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07952.1" /translation="MLKRNKANVVNNTEVAEVKQTPTPSPKPTSKPTPSQAKPSMTPE PMEVQTPVQKSTPKPTPTFKPEPTPQINRKTPAFPY" assembly_gap 7524..7623 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7813..>8670 /locus_tag="TVAG_332780" mRNA <7813..>8670 /locus_tag="TVAG_332780" /product="hypothetical protein" /note="transcript TVAG_332780A" CDS 7813..8670 /locus_tag="TVAG_332780" /note="encoded by transcript TVAG_332780A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07953.1" /translation="MYRQIPLSVAFSSENPDVKIKGNRVTFKFPTDWIVNINEEKYIG ITSMYITRAFRKVDFILQVEIENDEQSLSAQNIHIYKYFKDDTTLQQCMISFNEMFEK KFNIEVQTLQPLREFLAQLKEEGSQPQLIDFHYEFNENEDGTHDCQFVVFSPFNEVAK EKENPLRIRFQISEPSDDFKNVFNYDAMLPRKNEFSKIVTPDIWDRKQAILYSNLSKG VENEFIGHTRNSPLPNPKYYKLTGFNREFWIDMYSTHDHKCPVFLPPDHKDCLYIEAQ LLNSTIAVL" gene complement(<8750..>11761) /locus_tag="TVAG_332790" mRNA complement(<8750..>11761) /locus_tag="TVAG_332790" /product="hypothetical protein" /note="transcript TVAG_332790A" CDS complement(8750..11761) /locus_tag="TVAG_332790" /note="encoded by transcript TVAG_332790A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07954.1" /translation="MRLLEKIKINSQQRWMVCYKLGGKYECSTLNLNNIGTLLHQLLK ENFISEIEANAAGIVEMHYDFFLTNIKNLTEIKMYDLTEYEGLTMSDVKKGKPKKRPY RDESTLTNDQKAILEALKQTGNPALIESFWKDNGEKKFYKKRSGQFWKYLCTLPINLE RYQIFNELNKRTATLMTEDNCLVYACIQAGVNEETIDHMREVIRVRDFPQSKVQEISD ATGIAFNVTIGYFNDSRHNEIKRYIPKECETVRTIDLLLVEDHYMLNERLPMTTYFIR NYIEILKECGGMNIEKQMKIYTKREDKYVVRMDRTTPLWDVMKTLWECKYFEPISYGE LFTYTTDLYKQNLAPFKDLTYAPKYCVQLKKKAESKEVNKTKCKFIPEHVFFADFECS TDGFHKAFNICYDSEDGSVSESIWGQNCATEFLERLPDKSLIYFHNLSYDINFILRHM TEVKGTPIIKGSRTMQITGLYKGRAIIIKDSYSVINKKLKLFPAMFNLQTGPKEVFPY NYYSSTLLANDNRTGVISEACKFIQDADTFMKNIDSIKGCRIDENHFDLEKYSSFYCK QDVRILREGFVKFRNDILKEFDLNVYDYVSICSIANKLFENRVYFPNGNLYDLSNKPR EFISRCIQGGRCMLSDNMKQKSEKKLIADFDAVSLYPSAIARLYTLEGIPKVMKKEML STEYLMRHLFDDDQKEPIGEKFMSGFFVLIKITEIGIHRHFPLIVCDPELNPELNVPR SSNTCCLMYVDHITLQDLIKYQGVKCEVLQGYYYDGNRDIRIRDEVKKLFELRLKYKK ERNPLQENIKLILNSIYGKTILSPIESKITIVDDKDAIRYAIRNYNHIVKFEGLDGSX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGKKTYIDLLTNDLNEVAFHCRMK GVKQDVIALTANEMFPDSVQCLYDEDKGLMVPQGKFDKDSEFSVMKLYKALYDGQEIG FDLCKSCQPCFEEKFNFSITTKTSFIRKLKF" assembly_gap 9097..9196 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region complement(11838..13043) /note="repeat family R410a" assembly_gap 11848..11947 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13115..13214 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region complement(13463..14350) /note="repeat family R325b" gene <14367..>15248 /locus_tag="TVAG_332800" mRNA <14367..>15248 /locus_tag="TVAG_332800" /product="hypothetical protein" /note="transcript TVAG_332800A" CDS 14367..15248 /locus_tag="TVAG_332800" /note="encoded by transcript TVAG_332800A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07955.1" /translation="MQVRNIQNIAPSLTDKSIKIYYEHVMMKPTKIQESQYTYEYPRH WVEYVGGEKAIEIRQVRSIPAGRTILLKNFNVLRYNDETKKQDSFPVAVYVNLDTGDD MKVFNTKLQTVVREQLTAEGHPLPSEVTIAYNFETNSIDFKVVSAKKSDFTFNEADVY SNENFKAIAWLDNDDCFKKIFKFSDSKMSIDDLRGMLPSTFTVEGSAGLLTRLSIGGI WSRENIVIKSSISEFAEESILCLSNYMYSPPKHYSITNFVSKFNIRLVEPSSMKDVVL PKDGKDGLIIEMILIAY" gene <15564..>16001 /locus_tag="TVAG_332810" mRNA <15564..>16001 /locus_tag="TVAG_332810" /product="hypothetical protein" /note="transcript TVAG_332810A" CDS 15564..16001 /locus_tag="TVAG_332810" /note="encoded by transcript TVAG_332810A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07956.1" /translation="MSGGRVSKTLDANKGKIGGWVAKKLRLNKIGLINKASNLVATES ENALGKDDEFAKHAKDFNDQMKGETMHLNRVDGTKENVSSPPVVLPYGPYGMYGNPYE RPFDPLTGGSNWYHYGRRRKTVKLETDVKKATKKKPRKRVIKQ" gene complement(<16158..>16514) /locus_tag="TVAG_332820" mRNA complement(<16158..>16514) /locus_tag="TVAG_332820" /product="hypothetical protein" /note="transcript TVAG_332820A" CDS complement(16158..16514) /locus_tag="TVAG_332820" /note="encoded by transcript TVAG_332820A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07957.1" /translation="MHFNKDRPIDDERNPEYITIPYDAKFIAYIPYGRRGTKTISTMT KNYFWSDEENCLIYINAYLNKATYCTKEGWTGFELYIYDDDGNRRCVYPYDNMYHCFH QALNEYIVSKGLIPVE" repeat_region complement(16831..17091) /note="repeat family R31b" repeat_region 17202..18068 /note="repeat family R11b,R31b" repeat_region complement(18065..19813) /note="repeat family R372" gene <19886..>20734 /locus_tag="TVAG_332830" mRNA <19886..>20734 /locus_tag="TVAG_332830" /product="hypothetical protein" /note="transcript TVAG_332830A" CDS 19886..20734 /locus_tag="TVAG_332830" /note="encoded by transcript TVAG_332830A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07958.1" /translation="MLPIEKENSRVATTKPLDELFTNVGQKFETDTVKHEGYRFDYPL RWLRDPSVTQAIGFRRIKFVSIEDKSFPFIVRFHIDYTSEGQRKMWEEIELIQVDLSS SLQTALKNIEDKINSCYAKYADEYANTDSTLYVRIVYDKQNSQVSFQIYEDNPNKDEQ IYTEFTAMSWYYLQRMLNQKVEPPLANIYSRYARDEPYLFKDVFDPDAIIVHASFSGA QNSFLCLANDFYEKPTKLYEPPSGSISDFQVWFTTDGRKRIIPLYHAFYLELSFIYNY YRTIKI" gene complement(<20739..>20972) /locus_tag="TVAG_332840" mRNA complement(<20739..>20972) /locus_tag="TVAG_332840" /product="hypothetical protein" /note="transcript TVAG_332840A" CDS complement(20739..20972) /locus_tag="TVAG_332840" /note="encoded by transcript TVAG_332840A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07959.1" /translation="MGFFSKIGNFFRNVGRGIWNGIKSVGRGVWNGVKNIGKRVGQFV GIIPKDPEPEEQAPVIQQPEPAPQSNWQPQPVY" gene complement(<20991..>21353) /locus_tag="TVAG_332850" mRNA complement(<20991..>21353) /locus_tag="TVAG_332850" /product="hypothetical protein" /note="transcript TVAG_332850A" CDS complement(20991..21353) /locus_tag="TVAG_332850" /note="encoded by transcript TVAG_332850A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07960.1" /translation="MDAQNLANAQQPGQPNPENIPNEVRIQTAMANYGQVPTDVQMQT AMSNDAALGLPPWYANMRWKEFYTNPEVGYKQLYADDANTGVDPEYVFYQRRNRMYEL QLKNAMELNRKRKRLGGH" repeat_region complement(21814..22272) /note="repeat family R321a" gene complement(<22768..>25533) /locus_tag="TVAG_332860" mRNA complement(<22768..>25533) /locus_tag="TVAG_332860" /product="hypothetical protein" /note="transcript TVAG_332860A" CDS complement(22768..25533) /locus_tag="TVAG_332860" /note="encoded by transcript TVAG_332860A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07961.1" /translation="MHSRFHGSAFRNKMPKDPVVTDVEDPLKESGLLGRNPSAVNIIR SNTSQATLNSPQTDTIKITRPKTAFRQLQKPKQTTIDIEKLLKEHNITPRRTTETTTS IFQDTKPEEGPHVFYGKVLQPNEPPAETNFLQLSEMIDRLMDHGDIDAETIYYKIFGD VVRQYYIECTLQGDVLEKCRTFFSSAQKEIPKIEREYKQKVTEVEDKIEKVNKLADQY GPEVIKNKDHSERLTIAIADKRNDLQVLIDHYDSIVKQVGLASKEAASIKEEMNQLDN RIAEKNKQLVELNNELRQLDTLSTNYTADTLRFAENLKMLRQQQEESRKGIQDANNEM QDFKNDIMALDREILTATETIEKSRVVPDKSPIEIQCDIISRRLFAPKKIKRISHAGD RPSVAGSTSNIEFEDDVFKPILNAYNNATKQNYGQKKINVQTYEDFATLKHIILNNDK EFRMDDEDIKQGEAGEVEIKKDNTDFLRLFASKIVSDAIYRACRTKPVTTATTQSLLP QPKVETEIQQKTEPQAKTTFLGLLKTNYSNRAPKRLEWLLTEIRQILSEKTAENADLI ADKKPLTPFPKFVFDYAKRLMKLDYMTDQYCWDLYISCHEHADRTPEVELFTCFLDQV FNDEQLAFALRARTDCIKVGCSIPIKTRDQLETLSEYYLSQDQIEKALKRWWAARYQN RFYIDILELSIARPAIHLESTKRYVAMQDILQKCIIEYQNDVIARLNEQLLLYRIIPR LSAQGFNDLMYQLIPALTQSQVEDFYRSTVTKAKQREDVDIDGFIEIFKEGCLLYHQN FKESSRKTQMEADDVHATVETLWFRSQANIKKIIEFFTNQLALQPDNLTLRTYLDDAN RYMSMLNHSLTTSDGVAGVQHYFSLIFTLDVMYSTISYIDAELFKPSLISAECAIRES WLDAFLS" assembly_gap 27841..27940 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 29055..29154 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 29480..>30797 /locus_tag="TVAG_332870" mRNA 29480..>30797 /locus_tag="TVAG_332870" /product="hypothetical protein" /note="transcript TVAG_332870A" CDS 29799..30797 /locus_tag="TVAG_332870" /note="encoded by transcript TVAG_332870A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07962.1" /translation="MNRLYSVSFEVIVVKNKPTLTITTQNKQEIYKCPNDISFHVEGQ VVDLDHTGAFSLYYIIDSSNAIKYQNTFIISSSPTSIDIYIPISRNINEGTHNIIFYV IDESSERSNEVNIEFTYISHKPTLYITTPDNQQLRKNTNTFILIEGQVEDLDGSGTVT IYYNLDNTNEKQLTSLTISSTSKQNFANKIDFPTNFFEGTHNIKLYCIDEQNKKSNEI TIKFTFNYNAPTLFITTSDNQVFKKNDGQSFIISGSVQDLDGSGTVTIYYQFDGQNQA VAQTQTISQTTSYPVYKIIEFPSNFPESNSHYINIWATDEANKNSLTITKKFFISL" gene <33682..>34893 /locus_tag="TVAG_332880" mRNA <33682..>34893 /locus_tag="TVAG_332880" /product="hypothetical protein" /note="transcript TVAG_332880A" CDS 33682..34893 /locus_tag="TVAG_332880" /note="encoded by transcript TVAG_332880A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07963.1" /translation="MIDNMQSQKIDSVTINEDRFSFDISTSEFFDTFTSESSHTIYIW IVDSFGKSSRKYTKTFEFLFNSPSISVTSPNFNTFYRTTDKYITIDFSIKDLDCTGPI SIMYKLDSKDQNLLTTKEINSNEEYYFSEKFYFPSGLSESHHNIQIWCYDEHNKISNL EELIFLYKFNSPELAINFFDNGPYRRGINKTLHVEGTVIDKDGLGKVTVKCFIDDIDI KQTIIDIVNIEEHPFNIDLQFPCKLNESFHFVSIIATDENNKSSSCIRKTFEYCYSSP IIDITNKDNQTYIKKVSKHLTLNGIVQDDDETGRLTIKYKLDQNSFIDLTNINIYSNI TMNFSERINLVPLQFGNHSIELFAIDDDQKVSDHKYLNFKYVDQILVMDGYSRKFSIG LVLFTHLLGFW" gene <36540..38119 /locus_tag="TVAG_332890" mRNA <36540..38119 /locus_tag="TVAG_332890" /product="DnaJ domain containing protein" /note="transcript TVAG_332890A" CDS 36540..38045 /locus_tag="TVAG_332890" /note="encoded by transcript TVAG_332890A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="DnaJ domain containing protein" /protein_id="EAY07964.1" /translation="MYYLICFFTINGIDIGGFQKFPDTPIGNIEKLMHFNKYWDAYEA AGKLIGDNYKAADPKAIRLRAQCALHMGMSEESKKEATFVIGNRKITGDEKLLCYQIR ARANLQLGNFKDASDDARNSQNQRVQRDVSTMYQYYQEYQNHLKYKKLQDAARYLDKV LEVCISSNVLKLERAKLAWDLNDYKRFNEVAKDLPKAFPNDMELHYHLGIVATCNANL DEASKHFADSMKTKGAPKEYRAAKGHVREMTHAYIAAKRALQGPDVPEVEKQLSKLYD LAYQYCSGQSEIIMNLNLIKLQLIRKSEDKNATMAFLNEAIANYSNCADFEIERGELL LENGEFDAAIYDFQSALRKNRNLKRANDGLNKAQQKKREATMVDYYKILGVPRSATQS EIKTAFRKATIKWHPDRHRGEEEKKDAEQMMKKINVAYDILSDPQKKQMYDNGVDPEH PEYNQGNGMQTEIDLNDLFNGFNFFQGGGGGGRKIFFQQGGGGGFQFQFNF" gene <38791..>39411 /locus_tag="TVAG_332900" mRNA <38791..>39411 /locus_tag="TVAG_332900" /product="hypothetical protein" /note="transcript TVAG_332900A" CDS 38791..39411 /locus_tag="TVAG_332900" /note="encoded by transcript TVAG_332900A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07965.1" /translation="MVAGGGGSTEWPGSIGGNGGGLEGGAGQSDCFNNGTICPEIIST GGTQLRGGIASKRNNFIFAPSQKGFDGAFGISLNADMSNNGGIAGNGYWSGASLEYSG SGGGGSSFISGYDGCIALNSSENEDPNPNNSSIHYSGISFLQPSMHKGNTTMPLYHSP NAYGIGNKGRGCIRITILNYPELSCDIHYALPFNLLIIYIFFILES" gene complement(<39485..>40219) /locus_tag="TVAG_332910" mRNA complement(<39485..>40219) /locus_tag="TVAG_332910" /product="hypothetical protein" /note="transcript TVAG_332910A" CDS complement(39485..40219) /locus_tag="TVAG_332910" /note="encoded by transcript TVAG_332910A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07966.1" /translation="MLPRWLSDKTNEISKSGTLVVSNCYSFDVTAFRLPMFSIYLSQI KTIDLSGTCIFSLDGFPKMRSLSTFIANNSQISSFKNFSILRGISSIYLKNTPVSASK NYGLCVSIMLLPELRSMDGKVIADRNKAKASSIDPHVSLLLDKGWDMPYPIPSIMTIM NECEKYGIPFDEKDEEGQYNTYSDDEFDVSQNESNSSDHIVHVSENDKKLARGLAEIF NSYGENINPSDYNTLYQRLADIVLQM" gene complement(<40629..>43418) /locus_tag="TVAG_332920" mRNA complement(<40629..>43418) /locus_tag="TVAG_332920" /product="hypothetical protein" /note="transcript TVAG_332920A" CDS complement(40629..43418) /locus_tag="TVAG_332920" /note="encoded by transcript TVAG_332920A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07967.1" /translation="MSELRNSLGTRSPRITTPQLNQTKNKSVTTLKVKNMPNARLFVD KKEGIRTMRLRELEAAQEREEKERLEREADKEPNVFTILKERREEEENCLDFLDVNRR ILRQRNSDLVDDRLNADYQHYLYKYIRYQAENETTLKAELKEAYSNKQKFSDNRSHRN DQYLEQRKKDYAISQKRVQMLIQKLRDEYRNNVNNALSTIEAISQESNNTSMDMINTM SQNITNGLVSSALALQKVADVINFVPFFYNELIPHFQANGLVFDINNQQIPQFHVTNY MKSLPNETNKVFTTILETFQPESMTPKILSRQCRAICVVTKPLVFSDEQKAKIAETLG WNYYNVENFNNAAEEIFTLLSTTTEDALIFGFPRTPSEAQDLFNMFNPQTDKEVKSHL LPRPVSSEITPFDKIIELDVSDRIIVEDVYSSLVNPEGQTYDVRTLDIQDENQLTQLR SSPDENLDIPQFPMRSVTMKTNFDLLREEYAKQYETIELHNREITDDLINQLASVTEK IEMPQEPQYPPNILIDNLSSQIANFSPELKEFFVNQWKGIEERYESAISRVFSLVNQL HVRMVDHLTKARSEMLSYLFRPGNSQQHVIEFQQWHCTQVERGMRRMSKVKDECNLRL NSLREQLISIENDRKSEEEYKQKDLMNSSFRTTLFETISNAYTMLAQAEIDRWTSCHN MIMDINQIIVNLDLAVPLPRKKLPLIVDSKTDKRKSAKKPARTTPLSKSRLENKLPPF ETPITENIDTFKKFVSDASCIYIPSTAPLSTRAKKPVKDKNPLAPHKINAIDEVQNCL RDDDSFIVSQLDRINAMCLDEIQAIQQAFDSYVEDSSNWISSHYEKRKAIADTAVAFM FQKVNDEQQLNQLILFSDENCVIDYSQLLSPNEESPKIPAAFPEDAIKEASDGHAENL YQIIATCDEQQTVSN" gene <45246..>46352 /locus_tag="TVAG_332930" mRNA <45246..>46352 /locus_tag="TVAG_332930" /product="hypothetical protein" /note="transcript TVAG_332930A" CDS 45246..46352 /locus_tag="TVAG_332930" /note="encoded by transcript TVAG_332930A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07968.1" /translation="MSCRLSISIKKNPNLGGTKLKFRCSADKCEACISFLKDDEEYIL TEYNGTHNHNQIKDETKKYHTISQCYRRVLINFIKQGGDPKMAQIECDKKLDLDDPLN RPSFLNASSDQMKTIQEKGNKKIKGIQKYDDNQFKSTQLFKGIKEQESPKDLIYFDVD NYNKPKKLIFYYASFKFLDIIKIVKGHFIDATHSLLEFKMLFYMISAKFPNTHAFPIF QFVVYPNTSENIAFCLKAFFNWAKVKPKYFMSDCAQEIENAIINSFPEVILHWCAVHV MRAFRKNLKDYAFESSDKLILDTKMNYLAYGRNGKKEWIEPTFKKILEIAEKFPEFSK YIQNQWISNQERWTAAERDENLALTNNMANPNFS" gene complement(<47495..>47929) /locus_tag="TVAG_332940" mRNA complement(<47495..>47929) /locus_tag="TVAG_332940" /product="hypothetical protein" /note="transcript TVAG_332940A" CDS complement(47495..47929) /locus_tag="TVAG_332940" /note="encoded by transcript TVAG_332940A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07969.1" /translation="MKLIDFIVPSFYYRISQDIRLRDKIPNPLPSEKKPKKSTIRLDT EKCIMLTDKIKSLIVNSSANLNTLQLGLDDLLDKVVKAAKVQKRMTQYFSKLSIPMEI KLSILTQITEFGCNTPQFIVENAKSFQDKIITDFHLQIYTTL" gene 48045..48492 /locus_tag="TVAG_332950" mRNA 48045..48492 /locus_tag="TVAG_332950" /product="hypothetical protein" /note="transcript TVAG_332950A" CDS 48056..48481 /locus_tag="TVAG_332950" /note="encoded by transcript TVAG_332950A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07970.1" /translation="MANQSMMNRIRTNEKIFGIWAAIASVVTIISMFCIFYLRRNNPA KQNIKTFGFATIVAFGCVIAIKRAIRVQSVVEGNSKKYVTQGDLKGRHAILIDLLGVS MFVQILAIWWSKATVFYLVVPGYIIYFFSKKLVQWLHYS" gene complement(48667..>49093) /locus_tag="TVAG_332960" mRNA complement(48667..>49093) /locus_tag="TVAG_332960" /product="hypothetical protein" /note="transcript TVAG_332960A" CDS complement(48710..49093) /locus_tag="TVAG_332960" /note="encoded by transcript TVAG_332960A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07971.1" /translation="MSNFKSFFNLRIPNGEEIPLEAEGNVSTVLTQVIVDNNGKPYTR ATLSAHVETLNPAEIEKDPDAPAIEHDVIIASFTPNTQQVINLSIGFTKEDITYLSAN GADLIINGYTVPPQTELIKVGQDQD" gene <49144..>50016 /locus_tag="TVAG_332970" mRNA <49144..>50016 /locus_tag="TVAG_332970" /product="hypothetical protein" /note="transcript TVAG_332970A" CDS 49144..50016 /locus_tag="TVAG_332970" /note="encoded by transcript TVAG_332970A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07972.1" /translation="MKSGTEYYESMNNLFDNKNFPGIKFDVELNQSPETTINSSINIR HPYFNIIEKNSQTKIVPSPIRIAQVVLNHQTSKLSNVILSLGQKNYISYQKSNSNKNT SVRCRCDFTSTSFIPSILLENNSKYHNFSIQAQTRDMIYIALIDTKMTLRYKNFIFTY QNVRNCVKGNTAYSILLHYKHGLRDFQAAIMKDNFRTLTLRHKHEINDKLTVGASLTA DSNLNSKVELAWIAKVNDAIIHSSIDTKLNVSTVYKQELYPQCNILVSTHLDHKNAQY NFGLGFQWVENSTN" gene complement(<50251..>51510) /locus_tag="TVAG_332980" mRNA complement(<50251..>51510) /locus_tag="TVAG_332980" /product="hypothetical protein" /note="transcript TVAG_332980A" CDS complement(50251..51510) /locus_tag="TVAG_332980" /note="encoded by transcript TVAG_332980A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07973.1" /translation="MTEKSSIPEARTIEDMQRKISSKEAELEEIFNEIDELQNTNDEL HAQHTAIQIQLNQRVKEAKREEGLKKSLLLERQSSASPAIDPILLQTEHYDFLVGKED SIRKLSIDLEALQKKCDNQESELQSVVQKNDETEQEIARIEREIQILASKGKTMIQET NAFKYNITQLKSDIGLYNKNINEIEVQIKDVVNQIEKLQSDLPLLGNIQREIDTIRRD NEEIKDKIARATEDVEEFEKNAADELDMIKARGEKAKEIIGWSSEEKSLMNELNTVTV EDQQVSEELDKILNENTILKKRLLKLQPIHKKWAVALRNADLSHETDTNIDQLLKECT LKSKKQNKKEGDHKKRLQDLIENNEKLVNKIAKRREKLDIVMGRFKIEESQLKSQIRS IRNSVFEKENELIEQIQAYKVKFADNK" assembly_gap 51532..51631 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(52645..53122) /locus_tag="TVAG_332990" mRNA complement(52645..53122) /locus_tag="TVAG_332990" /product="hypothetical protein" /note="transcript TVAG_332990A" CDS complement(52685..53119) /locus_tag="TVAG_332990" /note="encoded by transcript TVAG_332990A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07974.1" /translation="MDNDPMRSQTQMQSYSKYKRSTAQSIRDQERIKLRIFKLGAKYD LVKANLDNLFGPNATVYALLSHASIYAEKLNLHIDRLAQRYRQGLICWFTENWNAINN LLTQEPMQKIEEPVQPVKIGLCQPHETPSIDISDFRELLNYH" gene <54849..>55286 /locus_tag="TVAG_333000" mRNA <54849..>55286 /locus_tag="TVAG_333000" /product="hypothetical protein" /note="transcript TVAG_333000A" CDS 54849..55286 /locus_tag="TVAG_333000" /note="encoded by transcript TVAG_333000A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07975.1" /translation="MQQSELPPEYNSTIKPKLDGKTAETCYQHCFGKAGQQIAMKSKP TTIRSLSKQTSADISGTPKVTYYPPGYTGYIPCEFKGNRSYVPREDRSASDCVWQYNT NISGYGGYVPSLGMDPDVSNVKQASTTYRDLCSAAHFLPKVSA" assembly_gap 59230..59329 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<62593..>64194) /locus_tag="TVAG_333010" mRNA complement(<62593..>64194) /locus_tag="TVAG_333010" /product="Laminin A family protein" /note="transcript TVAG_333010A" CDS complement(62593..64194) /locus_tag="TVAG_333010" /note="encoded by transcript TVAG_333010A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="Laminin A family protein" /protein_id="EAY07976.1" /translation="MFFVFLSGSLCVQRMISAYYHAETGEYMYKEGKYDSDAAARGIF DDTDFNSTGWYNLQIEGKRGTDALAETHAAGYIEGIFTASFYKNHRNNVYQHLCSKYI KCEDNYTIPKVIRDYFKNNYNWVKLTGLSNPDMSDPWYFAAATTMAQIEGMVEAYNKV SNDDTLTIEDLWMFMSHASIYDIARAQGFALQQDNAPLFTRRGTVIVGRTSSLDNVFI GQTAWRTYGESVRIAKRYRLRYNSTGNIVDRRSLSSYPFMLHSDDEFCISDMGLAITS TSIITTNDYAKTVQASFQGYPYWFRNIVATLASHSAGEWFDNYKSEYSTGTGIEYILL DIKKFKYKEGYQDEFVLAVDEIPGQNAESKDMTSRLIEKRFVGSYDVPAVESIFKTAG YDTLAQTSPEWYSYENSARAKILQRTCQSIYDDDKMKTLIRLNDKDRYSEQGDTTTNA IAGRFELIKPASDAMCFGAFDAKFTSIPRMLHSEWVGQVGASYDNLPQLNLLNADACD NSDYVGVDTQMYNGWVDQYFDIEID" gene complement(<64570..>65847) /locus_tag="TVAG_333020" mRNA complement(<64570..>65847) /locus_tag="TVAG_333020" /product="hypothetical protein" /note="transcript TVAG_333020A" CDS complement(64570..65847) /locus_tag="TVAG_333020" /note="encoded by transcript TVAG_333020A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07977.1" /translation="MQRPQSAPKKKTRRVIDTKKVTVKRVVPKNTIDTSCYRLSKTTP INGNKVVLAEQAEPFADKYYREHEDERGDLRPPEEKLKDIEARLDENLEEIDRFNLLM KQKCYIYVVYGETSEEALRVHASLGDFYNFSNKPKSALRHFEKAHALEPGKELDNDTK AKISVGMSEAHLALSGENKREINHAGNTLKPALELEIENKMLKFRRDLTHARILSAKE KYEEAYDAYMIAEQSHKECEHEEDESTAKIYTEFGEACRNAEKYHESLPFYQKAYDIY TKLEMTKEAEAIAPFLELHEEEEVKEEEEAKEEEEKKESEQNNDSQAETKSLSLTDGL KEQITEKIEDEKLEADGEQDLNKEEEEKNEEEEEEEEKKEPEQDQKQPTLNLGESVQK VAEEIASAEDNNEEQNVEKNSTADSFESTSNNN" gene <65965..>66567 /locus_tag="TVAG_333030" mRNA <65965..>66567 /locus_tag="TVAG_333030" /product="hypothetical protein" /note="transcript TVAG_333030A" CDS 65965..66567 /locus_tag="TVAG_333030" /note="encoded by transcript TVAG_333030A; Probable pseudogene - evidence: frame shift Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07978.1" /translation="MTYSVYPPLHFKKGYTLLELCCYHGAVDCFKFLRTKFSSEITQE CLEFSFLGGNQEIMGECLKYKKPCGYCMDNAIISHNIDFVTFLVNEYGYKIDVIPCGQ SNNLESFLAYFDQTNNIHRCFAYSAMFEIPSLCEYFLSLGTNINIMGEFGSALHIAAK HNCIEIAEFLISHGAKINNNNNKSEEAHLFIKPHNIITKK" gene <67062..>67226 /locus_tag="TVAG_333040" mRNA <67062..>67226 /locus_tag="TVAG_333040" /product="ankyrin repeat protein, putative" /note="transcript TVAG_333040A" CDS 67062..67226 /locus_tag="TVAG_333040" /note="encoded by transcript TVAG_333040A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY07979.1" /translation="MAEVLISYGANINEKDRYRKTALQYALDNGNKNIAELLISHGAN IKDSPNCMLI" mobile_element complement(69113..69535) /mobile_element_type="transposon:transposon-like, repeat family R107_ISTva1" assembly_gap 69852..69951 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <70052..>71500 /locus_tag="TVAG_333050" mRNA <70052..>71500 /locus_tag="TVAG_333050" /product="hypothetical protein" /note="transcript TVAG_333050A" CDS 70052..71500 /locus_tag="TVAG_333050" /note="encoded by transcript TVAG_333050A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07980.1" /translation="MELEEETIFTVMDLCKFGVKQEIQAQYGYGERVRKERSQISFHC KYPKCPAHFNVAILDQNKYKLIKIVEEHDHSAPNDKSQYSSVFYRKYLEHYFQTDDNQ RAIAQLNAFKDLEIPLTGPSIPEMYAQKPRAIKRFAERIHALQTRYSPDDVVSLQIFV QTVQEESPDDLIAFEVSDNNMCFYYASFEGKAYAHSIKTFYIDSTYKLLRSNIPLYAF TGKIKDFHIFPFLYFFCQPDTYQNIQVCVCAYLRWVTIEPEYISMDCAPQIAQAIEES IPQAQILWCGVHVLRAILRKSNKFSSQEKFEQFYNLMKDLVFKLDAEHEEEANAAYDQ VLELLDTDPTASQYFNRQWRYNISRLIARDRREGDATNNIAEAHFRTLKHDYFPDRKN LRIDDVIIEIYTKVIPSFVIKLKIDQNPADDRVIRIMEKATIAEIDVKRQRKIESISM LNRLLNAVSDDSIDPTKIYPTLKVLLQRTHFI" gene <74434..>77316 /locus_tag="TVAG_333060" mRNA <74434..>77316 /locus_tag="TVAG_333060" /product="TKL family protein kinase" /note="transcript TVAG_333060A" CDS 74434..77316 /locus_tag="TVAG_333060" /note="encoded by transcript TVAG_333060A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="TKL family protein kinase" /protein_id="EAY07981.1" /translation="MNSAIQAIKNILNIISSYADDKQSFNREEEKAASTMMTKLDEFT ELLSQCQREVCITFLLSTPISATKEEVKQFRHSMKESLLVLGLTQAANYMEISDSDLT SQDLVDMKRIGIVLEQLYKKNQKEAGDRIEKRFQSLEELGVHYDAEELDSLTIPEIPE SLKLLIKHEDCVFEKTIGRGQSGTVYLGHFKDSDDNIAIKVLSKQTLSQADVESYRRE VYFLTILSHPSLTKFCGYTEDAPFYICTEFMSGGSLYHKLRNNPEQLNPTTRSLIALT VARGLEYLHSKGVIHRDLKSLNVLLDDNNNAKICDFGMVRTRDSRPMTGMIGTVHWMA PEVLMSTPFYDERVDVYSFGIFLWELLTGQMPYKDMQANQIIRTVTELGERPPIPEDC PQHLAKLITKCWSQDPEDRPTMAKVVAELQDSKYHLAGTDEAEFALKAGIVSCHKTSL SLPYIRKETPKPRPKSRESQVISPDRAMQCMHGPPSDSRKEALMYSLQMCGDQVTLYN FLDLGFTKALSLILTEQSEDSETVMTYLLTCREPKVFDIEVLKALLLYTSSKSDVFRN KALSVLLSASLLRFEFLKSAPSFVQQLLQFIYLPMPPQSSAALLQLANRLIRSISNAP TGLWEVLLWARLNLPQMLTPLVLPCMIGAVKFVEVRNDIKSDNYKELSQTFNANIMLF KEILKYDDTFEKLIPALMSCSKSNDICLKFIIENSKENSLFAYSVVQNLPFNFDVSKI VAVYKNLFLHDTKKISQIQEFYSVIEYLMVNNDIKYACEILKTVRIEESLFVNTKLPK LLSEAFYNSDDLLCTSLMLIYYNCLQRFRVEEFVNLDQIFLSILFGKRTELRKPAFLC VISAAEYISDFDYSAIHPVAAFYVHSSSEIIGNSAAKFISEKTKVCDDYDIDKTLEVF IENYKAPSKNVIVACDCFVEICKQKKVKDQSLLQKLSQMYNMLHSY" gene <78306..>78755 /locus_tag="TVAG_333070" mRNA <78306..>78755 /locus_tag="TVAG_333070" /product="hypothetical protein" /note="transcript TVAG_333070A" CDS 78306..78755 /locus_tag="TVAG_333070" /note="encoded by transcript TVAG_333070A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07982.1" /translation="MFGMGGNSSQSLLEPSGGGSGYFGGGGASVVYGKHGSGAGGSSY VSGCDGCVSVSKDYSFENNNTFIGPVHYSGLSFKNIRMLSGSEQLPSFNVSMTNQYVT YEQGHLGDGAFKITLLEHFSICSLKLNLYCFSYFQFFLLNLPSIFLS" gene <79301..>79522 /locus_tag="TVAG_333080" mRNA <79301..>79522 /locus_tag="TVAG_333080" /product="3-hydroxyacyl-CoA dehydrogenase, putative" /note="transcript TVAG_333080A" CDS 79301..79522 /locus_tag="TVAG_333080" /note="encoded by transcript TVAG_333080A; Probable pseudogene - evidence: frame shift Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="3-hydroxyacyl-CoA dehydrogenase, putative" /protein_id="EAY07983.1" /translation="MIKNVTVAGGGVLGSQICYMAAYWGFNVTHWLRSEASIERTKPK FDALRVNIRNDLEATKNSLEQIQNSIQEV" gene <79849..>80232 /locus_tag="TVAG_333090" mRNA <79849..>80232 /locus_tag="TVAG_333090" /product="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain containing protein" /note="transcript TVAG_333090A" CDS 79849..80232 /locus_tag="TVAG_333090" /note="encoded by transcript TVAG_333090A; Probable pseudogene - evidence: point mutation Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain containing protein" /protein_id="EAY07984.1" /translation="MGHEGTDQKCYDTIVEFAARMGMIPLKLKKEQPGYILNSLLVPL LTSAQVLFANGVADFETIDLTWRLATGAPMGPFKILDIVGLDTAYNIVSMNPLSKDQT SAHYKVVQILKEYIDNGKKGISTGE" gene 81811..>83406 /locus_tag="TVAG_333100" mRNA 81811..>83406 /locus_tag="TVAG_333100" /product="hypothetical protein" /note="transcript TVAG_333100A" CDS 81838..83406 /locus_tag="TVAG_333100" /note="encoded by transcript TVAG_333100A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07985.1" /translation="MGDATRNPSFVYRRKRSYQWSCPIAPKLEERPKSANISAMGYRK KQQPPPNINDLTKSTSNIDSGPIIDTEVDNESLYQSTKMVRTQVKNIAYNVKLDDIST LSFDEQFSLKLKFCTNIYDFANPYEDVGPKEQKTRVLCELVQFFEQSADSKKLSPEVQ ELLMNMIKANIIRPTPSIPLSPILLDFALVFVEPAWPQLFYVYQLLNRFISLYPESPL LNIEFARTAIYLTNLPDNNERLQLLSFLRAYYDSHQNSKVDIIKCIQKKLVDLQDLDS PPFCVMPLLVYLSHIFQRCNKNPPDEFYTVIRSSVFPLALNNYLPLYHQSMISLLTAV LPQDSSLNSEFHHFLVSFWPIGNGQKQPCFVEFILLTMSKMSPAQVTEAIKPTMNIFE QVVTGEQVSAAQMVFDFLANKSEQWVNDHSKRVILSLFDRVKFVTTNHWSTIMRDKAQ SALAGLGKLDRKSFLKAKTSKTSDQVRKQTDEEKAAAKKWRKIANAAQDYDGDIKQMM DLIMKTFVPKKTLF" gene complement(84105..85713) /locus_tag="TVAG_333110" mRNA complement(84105..85713) /locus_tag="TVAG_333110" /product="hypothetical protein" /note="transcript TVAG_333110A" CDS complement(84155..85705) /locus_tag="TVAG_333110" /note="encoded by transcript TVAG_333110A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07986.1" /translation="MQSAQRDNKRSTSRPRGGRNAAGSKPERSPRQNNEKPQQPQDGQ PQRQERRPNNDRLRRPRLNNIHLNRDIKDIKLNDEQTALVRELDQKIADIGEVVIPPS EEIEKLREEYEKKISTLRGRIESHYIQLDEVQKRQEAFEAKANPHKKEFDETDAKIKE IDAELNPLNAKLNEIRAAKNELFGRKKDLKDKIPGRSLDDIDDQIDQLEYEIETQTLS NTHLKSKLAKIESLKKARGQFSGFATIDQQIDKYKGTEDELYQRRKVLTEAKNKLWAA RKQFFGENKENKDQRNKFYEERKGIYDNLTKARNELKEQINSRKKAVDEFWARKNKAL DKRTERSKLMNRRLQIYKEAEDRMELIEIRAQKAGTIHEVKNPNEEKINAARSLISFL QAVIALDDVAKEEDQTVVLGKATKSAALSLINSVKKQSKKEKLAAKNSKKAEESKKEA KLELSLQAIQQFTLTGVTQPTTIEQIPDVINQLKAKDQEWSDAFIKLVLNFDINEDGS VKSTIKFA" gene complement(<86490..>87551) /locus_tag="TVAG_333120" mRNA complement(<86490..>87551) /locus_tag="TVAG_333120" /product="Exostosin family protein" /note="transcript TVAG_333120A" CDS complement(86490..87551) /locus_tag="TVAG_333120" /note="encoded by transcript TVAG_333120A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Exostosin family protein" /protein_id="EAY07987.1" /translation="MHNLTLPMQELLLHNQYLKGIKQGLAHTTIFEYIAFKSLERYEF RVKDPEEADLFYVPLFAALFNGLKDYANIDTIIIPQLRAFGKYFDRYGGVDYAFIQML FSQDNIPITVHQQKTLASMITLGDLNYNYSKYQMRESWRNVNFPLTSNIAQQFEIKPE SSRHISTFFIGQINLTDFDTVAAPIREGMANVMRVIPHSIVIDARRYDPITGVYSYNF SRMMSNSKFCCVPHGDGPTTKRLFDTFRTLCIPIVLSDEIKFPFEDLFINYPEILIQI PAFEPDRIPIAMSIPSTKRKLSMKKNMIRVSHLLEQKFDYNIEKGNLMWGWLWVHYFK LSTVAASKRRTLLQSRYLD" gene complement(<88658..>88975) /locus_tag="TVAG_333130" mRNA complement(<88658..>88975) /locus_tag="TVAG_333130" /product="hypothetical protein" /note="transcript TVAG_333130A" CDS complement(88658..88975) /locus_tag="TVAG_333130" /note="encoded by transcript TVAG_333130A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07988.1" /translation="MLVKSLIECGFDKESRDLDDNTPLILAAMYRHLEIVNFLVFIGA NINAMNVFQRTPLIQASMRNNYDIVENLISVGADKNVVDYRGQTAANFCDRSVNEILS NIV" gene complement(89417..>91132) /locus_tag="TVAG_333140" mRNA complement(89417..>91132) /locus_tag="TVAG_333140" /product="LMBR1-like conserved region family protein" /note="transcript TVAG_333140A" CDS complement(89459..91132) /locus_tag="TVAG_333140" /note="encoded by transcript TVAG_333140A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="LMBR1-like conserved region family protein" /protein_id="EAY07989.1" /translation="MDLQSIICLVSCVVLIAVITVFYWFYGAFRHPAWASSFMVFSAC IPVIIVSGILPYDISLNLFGHTNETPKVLYICLEILYWTSFILTWIIVPFAVSYLSYS HSISIKHRIWFVIRENLIFFGVAGGLVLIFGIVMIATKKLDPKGLFSLAIALGNAYGL ILQCLAFGYAFVKVPMNIWRNADPGFKYKNSVYQLFKETKRCAAAVADADAALDHWRR CRENIEGEMAEKYLDLGRPRAENIDLLKSALPIPERFYTSQCTNRKINAVRKIDWKHC TEANIEDFFYLMDQTANALDQCKNYVNYTAVVAEKSLAKFKKSVESGKKASITKILIR AADILLMVLIGISFYNEILMIPSKQKYTLFNYLSHCHMSQYIGQILITFPLISFYLFL GGWALVQLRIGSFYRFIAHASNGNTLNYWAILIARFGPTVGYHYMLQVGASNAAFVKV MGNMNDVYFIGNSFNYISPSIMIIVAIFVAFDIWDRIKPKLCCKAFHTYPNDVSLAWA KDLQVGEEVLCELSLQAKDMIDSNKAFSVVNIGEQRTADYVPVEDELMD" gene complement(91606..>92973) /locus_tag="TVAG_333150" mRNA complement(91606..>92973) /locus_tag="TVAG_333150" /product="Adaptor complexes medium subunit family protein" /note="transcript TVAG_333150A" CDS complement(91663..92973) /locus_tag="TVAG_333150" /note="encoded by transcript TVAG_333150A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Adaptor complexes medium subunit family protein" /protein_id="EAY07990.1" /translation="MGLIKHFFVINSRGNPIIIRAFLDETNIAVVEDFYQRLTEEPPP PPIFRLEQLTYCWVNCAGLYFVVATPENMSPSTLELLLRRITVVLSDYLGKCTELSIQ KNLALCYEVVDEVLSFGCPQATDSSMLLHLVHNEVEYDQNFLTTFLQTEIFPGEGFDR PLALKTSERTKTNNEIFIVLSEKLSLTLTAQGNIINSNITGLCTVKSFLQSVPSCVIQ LDSQAFFKTRNMPKNLLYEYDDITFAPYALTNSFDSDRSISFCPPQGSSLLFTYRTTR PPSPPPFTVVPYFENTQPKVVVVRVAVTSTFPVDVKATDVSIIFQCPVETSSASCELP QSVLDKQSSEFDSKNRQVVWRIKEFGGLAEYNARFRFIFDGGIPGAAETLLGPIAIDF TIAGPLPSGLSVKNFIVSTQGTSNEPHKWMKEITQAGSYTFNFI" gene <93762..>93950 /locus_tag="TVAG_333160" mRNA <93762..>93950 /locus_tag="TVAG_333160" /product="hypothetical protein" /note="transcript TVAG_333160A" CDS 93762..93950 /locus_tag="TVAG_333160" /note="encoded by transcript TVAG_333160A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07991.1" /translation="MSANPHESWAVRRYKGVTKILGQVQEKVSQVGWAVGATTVLIIY PLAISILDHRFLKKNGVI" gene <94422..98166 /locus_tag="TVAG_333170" mRNA <94422..98166 /locus_tag="TVAG_333170" /product="3'5'-cyclic nucleotide phosphodiesterase family protein" /note="transcript TVAG_333170A" CDS 94422..98063 /locus_tag="TVAG_333170" /note="encoded by transcript TVAG_333170A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="3'5'-cyclic nucleotide phosphodiesterase family protein" /protein_id="EAY07992.1" /translation="MSATMKMLRKIHEQNERESVVKELISLRPITPVEIRASHPFETV YNDFNPPPIPVDQFAPYLSRKLTMKRNQKIEKMKMQNTVAQPTFVLTNSVTQDTEEEK ETKSNTSVKTQPQPQTNPPNPTTLVPASSRTTDKSFLLHSGRHLQQHLKMEECFDKIV SGCSSMPLHRLFETTLQVYFLAEKVLFYHDVSSVKVLYCPSTTTYCPHGSGLVGYTQF VRKTLNIPIANEHISYDYKTEYANCPPDAHVLVFPLYDGSSHVKCIVEVIRNGKSPTF TEDDERFVEYFQNKCKIYSRWLFQPVLDDQFASDLMQTCRLGQFVESIRDKLCKLFSC RSAEIWMLHKEKDQIFQYQPNKDQPILIPPNDTGIPGFSLRKEIPVSCISCRVHSAYN EKIDGNGDYSVLSIPVRDPNMPVTYAIVLRGKRIPQFFTDYDEKILARVAGYCIASLT SAEIVEKNHMALEESLRQQKRLRSLLEVAETLSGQLRMDVLIPNIMSRACDLVKADRC SLFLVNDSHDKLQMTFGAGLKNTIEIPINAGIVGWSATKGEILNIKDAYDDPRFNRGT DLATGYRTLTILSVPIFDDKKGIRGVTEMINKLDGVFTEDDEKLIQIFNVFCGISIEN ARLYRASLDLTMQLHSFRDISASMAQSQTIKKLLEEIIKNTRTVIGAVYANFYLCENG QILFTPYVQDEDIDETSKKAQQIREGRTKEDSLGVKRAIIAKLMLGDESEYDAEEKKE EEMRNKVITKCVNTKESAMLNNDDYEKSLICVPILSSDRVVMGAVLMRWKKSQQKFTQ DDLKLLESYSVFLSLSLERFKLKNIAQLGSLEVEMQNVMSNEERGEMRVPTKLLMSDE ECGALLLRNFESTEWKGMALFKVAFNIFNTFNLFKKFKISASCFFSFLFEMKNSYLPV PYHNFTHAIDTMQFMAHVIILCGLKDVLTQKEILILLVACICHDANHDGFSNNYNYKA QTPLSILFKGQSVLETHHCSVSITILSKDESALFNNFPDDEIASVWTLFIDLVMATDM SKHFDIVDEMREYLAMGLTWKDHPKGRLLFMKLLIKAADISNCVREFETADRWADVLC EEFFRQGDLERALGMEYDGPLHERQHLNKQKSQLGFYKSVALPLYLLMERIEPGFSVF VTNVKNNMEKWAATKKEKDDLERIEKEKEEEEKRKREELKAVEEAQKKDMEQMAKAKA EKEKQKIKY" gene <99881..>101326 /locus_tag="TVAG_333180" mRNA <99881..>101326 /locus_tag="TVAG_333180" /product="hypothetical protein" /note="transcript TVAG_333180A" CDS 99881..101326 /locus_tag="TVAG_333180" /note="encoded by transcript TVAG_333180A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07993.1" /translation="MNIITKKYLVIEWGNDIKDKEPFSFCINDKRIELSKHVSIMISK VVHDEYLRDSSIKTVNKYLNLSCNNTIDIISEFLKTGVLRFENDRSHNRDLFEFSSTF GIEYITNIFCEFVKTTYQEINEESFYDIFDCARVQNDTNKINECISFFASRMFDLEEG YKIKTIKRYGYDFFESVLKSESLKISNEDSLIDTIMSLSEYNNSFFSIVEHVRVEFCN NNSIKSIKNFSVKHGFESITTEVFERALINRSQIPHNLTLSNTNYIYKPEINPPKLKI SNTNYFSRETILNKFEISNIEGHHKIDNSYENTRKLRNLRKTKDDFEQIYKILETASN EGDLSTIKFAVDEKYCDVCDQYGYNMILEAAWQNNLNLVKHLFNHGADIRSRTNDKWT VLHLFCCFGNLEGVKFALNYIDINDKNIDNETPFHAAIIYNHADICQFLISQPNIDKN AKSKDNETFLQYAIHHNKQNIVDILRKNGYT" gene <102299..103358 /locus_tag="TVAG_333190" mRNA <102299..103358 /locus_tag="TVAG_333190" /product="Choline/ethanolamine kinase family protein" /note="transcript TVAG_333190A" CDS 102299..103309 /locus_tag="TVAG_333190" /note="encoded by transcript TVAG_333190A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Choline/ethanolamine kinase family protein" /protein_id="EAY07994.1" /translation="MQHIANGMLFPNTGSEFEKIAFLIKLLDLKGDTSKITLKTMAGG ITNSVYMLKTPTKKSIVRIYGNNTEQIIDRVSEQANIRKANLIKIYASFDNGMVCSFQ EGRTIDVPMMSDPLISDKLARKLALLHKSTYFENNTKNIVFDRILNFINKTNPEFEKN GKKVDIEALLHTFSILKNEITALMRNRPLALTHNDLLSGNILWDGEDVGFVDYEYSGY TWPEYDIANHFLEWCGFELDLTRFPSYQQQIRFIKIYLTNLYGKEPEQKEVEQWQTRV DKLVHLSHLFWGSWAFFQAANSSVNFPYFEYGLWRIKLINFNLPLEEGHPLLKNQLVT VN" gene 103542..103934 /locus_tag="TVAG_333200" mRNA 103542..103934 /locus_tag="TVAG_333200" /product="40S ribosomal protein S26, putative" /note="transcript TVAG_333200A" CDS 103549..103905 /locus_tag="TVAG_333200" /note="encoded by transcript TVAG_333200A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="40S ribosomal protein S26, putative" /protein_id="EAY07995.1" /translation="MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNM VDASSAKDVSDACIYQGYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVPLFLKL RLEKLEQRNAQRLSKE" gene 104301..>106699 /locus_tag="TVAG_333210" mRNA 104301..>106699 /locus_tag="TVAG_333210" /product="hypothetical protein" /note="transcript TVAG_333210A" CDS 104318..106699 /locus_tag="TVAG_333210" /note="encoded by transcript TVAG_333210A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07996.1" /translation="MSRQYAAIPIHLPFEMTNVCAMTQHSDSLFVAFKDGRIISIPLK IDSKTNVFLGESTSLLVKTPDFEIADIKSFADRILVHIKNKSGVSGPLIAINTRGEVI HVDDNTDCFSPNSFSSSKTLAVVSDKRLMIKELKQTQKFEQTFSREFSEPPLSVALSY PKVCLVSHSKLMILDIQNPSNFLEIKAISTSHPYAMTRDSVNFFSYAGNTAMTFDSKF DSNAEPILFESPCTDHTRCGQFIGSLSENQIVIYDFKHHKGTIPNKNYKRVASFDSSI LTCSDNDVFILKDFTEAYEHVLTGSIDTAILALPNQSIDSISSLFEMIWNNNKHIEAL SLLTMKEFEDCIVDAFRLFEFLVFSPEIPKSGRLSSAEITKDEKISQVFVDTLFQIRS GLSDEVKAYVDTAIVETLSYLNNSKKLCDFFDENPVVITESLDKFFEKNNGVPFAVYL SYQGKHSEAVQILKESSSLDVAARIISKKAIDWEFVEKNVPWLFERAPEQACLVLASD IIDISRARAYVVSKYPLFYMRFLMCALKHKDIISRKMFINELTTGLVKLLTNIKKPDF DRKEASWLNCVIQNKETNLDVMEKEISDDLIELLRTFHDEVEIQNLMTHVSKIDIPRV QVEIYTAAGYLSEALNIVWSEGIEKCVTFCQKYEIPQKAFSCLFKIMKERSSNAAKDI TAILKENIEIVDVADAMAQIGGETDLNDVIEFVASLYKDITTERRSKEIAAAFAENRA KESDYQRVVLESGHVSLGGDQVCAGCGKTLGCQYVVRTPNGLLYHYKCLTIQK" gene complement(<110252..>111952) /locus_tag="TVAG_333220" mRNA complement(<110252..>111952) /locus_tag="TVAG_333220" /product="DDE superfamily endonuclease containing protein" /note="transcript TVAG_333220A" CDS complement(110252..111952) /locus_tag="TVAG_333220" /note="encoded by transcript TVAG_333220A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="DDE superfamily endonuclease containing protein" /protein_id="EAY07997.1" /translation="MEFLTVEFLGRQQKFIINCRAEGMTYSQTKLAWEEEYPDLGTLT SNLIATALKRAALGLYWEKGNHGGADPYLCERDQLTLKEIIEDSAYKGEALEAADIID EAFKLKELRRDYGYRFLLEINCPTLAEEVINTLGGDDVSRPYVNHILQQLHCKLKACQ EIEESRYMACEPRIIEEFYDKHRETIESTPEELIFSIDETFINKFKKKKVALPEEIEH MIAKGIPNFPHITALCGCSMTGKSVPPLFVLPCIAELPRELKVFQRERHCWFTSTPKG WVNRSVFLLYCIFFIEWLNFERQRMPEDIRDKPALIVCDGHSSRENPLALFLLASANI KLIVLPAHTTHILQVFDVGIAKRLKSKFTDYLRDYIKAPKQEFNSNAAMMRYAIIYSF ISAWQESVSLRTVQNAAAACGLCPCSVEALKHNKYVRELTPAEKELQEKRNYRNRNRF NINGEELTTMDMICAISDNIKKNPANHRFCRKPEQDTKERFYFWITNYLDPSTELLTK LPNMPGYIQMIRKIFQFSNKNFPILHQKFFNKILFYGIGVGVILAKSDTPVKGVITDR " repeat_region 112541..113374 /note="repeat family R321a" assembly_gap 113267..113366 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <113417..>114748 /locus_tag="TVAG_333230" mRNA <113417..>114748 /locus_tag="TVAG_333230" /product="hypothetical protein" /note="transcript TVAG_333230A" CDS 113417..114748 /locus_tag="TVAG_333230" /note="encoded by transcript TVAG_333230A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07998.1" /translation="MSKDIASMREIQHNRQLIMQALNKNTTNFSNYSKISESLKEGNL KLTLNPMTDEFLFQDNKNHTVCINPTKGTLNEKPINELLLKADVDNKADKEYVDDAIA KEEERANNAYATKEHTHPELADKTYVDNKMSSEVTRAENEYSKKTHTHSISEITDLQE TLNSKSAVGHTHTIANITNLQETLNRKSAVGHTHSISEITDLNVSLEKKANKNHTHTS FTTVAIESIEGTVEETGGDAIYCKPPNFPQGLTSDDDITTMRNIRCKDVYVMKDEHNI KFTAQDLYDKKADKTELQTLKTEILQTLYPIGSIYTSMNSTRPETVLGFGTWTQIVDR FLYCANSSKETGGSKTISGENLPAHSHYIDLSTSQAGWHKHRYWDWSAMTKGKGYDVK DNVKFAIDCYWSNTEGGGNHTHRVSGYTQTTGQSKDYMPPYMTVYAWYRNA" mobile_element complement(114745..115704) /mobile_element_type="transposon:transposon-like, repeat family R11b" repeat_region 115721..116122 /note="repeat family R31b" gene <116142..>116294 /locus_tag="TVAG_333240" mRNA <116142..>116294 /locus_tag="TVAG_333240" /product="hypothetical protein" /note="transcript TVAG_333240A" CDS 116142..116294 /locus_tag="TVAG_333240" /note="encoded by transcript TVAG_333240A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY07999.1" /translation="MNNTALRQMGSRWICRLPAVTQRVCQVLPIPQEVLDRLKKQQQP VENKPN" repeat_region 116314..116916 /note="repeat family R31b" CONTIG join(AAHC03003314.1:1..7523,gap(unk100),AAHC03019051.1:1..1473, gap(unk100),complement(AAHC03008813.1:1..2651),gap(unk100), complement(AAHC03030672.1:1..1167),gap(unk100), AAHC03002044.1:1..14626,gap(unk100), complement(AAHC03034157.1:1..1114),gap(unk100), AAHC03001302.1:1..22377,gap(unk100),AAHC03003295.1:1..7598, gap(unk100),AAHC03002583.1:1..10522,gap(unk100), AAHC03000374.1:1..43315,gap(unk100),AAHC03006654.1:1..3616) //