LOCUS DS113217 221734 bp DNA linear CON 15-DEC-2022 DEFINITION Trichomonas vaginalis G3 strain G3; ATCC PRA-98 unplaced genomic scaffold 1047229024083, whole genome shotgun sequence. ACCESSION DS113217 AAHC03000000 VERSION DS113217.1 DBLINK BioProject: PRJNA16084 BioSample: SAMN02953626 KEYWORDS WGS. SOURCE Trichomonas vaginalis G3 ORGANISM Trichomonas vaginalis G3 Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas. REFERENCE 1 (bases 1 to 221734) AUTHORS Carlton,J.M., Hirt,R.P., Silva,J.C., Delcher,A.L., Schatz,M., Zhao,Q., Wortman,J.R., Bidwell,S.L., Alsmark,U.C., Besteiro,S., Sicheritz-Ponten,T., Noel,C.J., Dacks,J.B., Foster,P.G., Simillion,C., Van de Peer,Y., Miranda-Saavedra,D., Barton,G.J., Westrop,G.D., Muller,S., Dessi,D., Fiori,P.L., Ren,Q., Paulsen,I., Zhang,H., Bastida-Corcuera,F.D., Simoes-Barbosa,A., Brown,M.T., Hayes,R.D., Mukherjee,M., Okumura,C.Y., Schneider,R., Smith,A.J., Vanacova,S., Villalvazo,M., Haas,B.J., Pertea,M., Feldblyum,T.V., Utterback,T.R., Shu,C.L., Osoegawa,K., de Jong,P.J., Hrdy,I., Horvathova,L., Zubacova,Z., Dolezal,P., Malik,S.B., Logsdon,J.M. Jr., Henze,K., Gupta,A., Wang,C.C., Dunne,R.L., Upcroft,J.A., Upcroft,P., White,O., Salzberg,S.L., Tang,P., Chiu,C.H., Lee,Y.S., Embley,T.M., Coombs,G.H., Mottram,J.C., Tachezy,J., Fraser-Liggett,C.M. and Johnson,P.J. TITLE Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis JOURNAL Science 315 (5809), 207-212 (2007) PUBMED 17218520 REFERENCE 2 (bases 1 to 221734) AUTHORS Carlton,J., Miller,J., Delcher,A.L., Schatz,M., Schobel,S. and Fraser,C.M. TITLE Direct Submission JOURNAL Submitted (23-MAY-2005) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..221734 /organism="Trichomonas vaginalis G3" /mol_type="genomic DNA" /submitter_seqid="1047229024083" /strain="G3; ATCC PRA-98" /db_xref="ATCC:PRA-98" /db_xref="taxon:412133" /chromosome="Unknown" repeat_region complement(188..3463) /note="virus-like, repeat family R371,R1794" repeat_region 3801..3828 /rpt_type=tandem /rpt_unit_seq="t" /satellite="microsatellite" gene <5791..>6252 /locus_tag="TVAG_462270" mRNA <5791..>6252 /locus_tag="TVAG_462270" /product="hypothetical protein" /note="transcript TVAG_462270A" CDS 5791..6252 /locus_tag="TVAG_462270" /note="encoded by transcript TVAG_462270A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18542.1" /translation="MDLNFEYIAAHISDYINNENFFDTFEIEDIKTIMKYSHLTADQY VSLLKQSHSTISAKKLSLCTRVAKVTIKNFEEIVSILKSVKRYMKFSICDGIIDFLKQ NEKVINYSTNEPVIVQDKLKALQNENENATKDTTISQANENYNHSRDILTK" assembly_gap 6255..6354 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7378..8959) /locus_tag="TVAG_462280" mRNA complement(<7378..8959) /locus_tag="TVAG_462280" /product="nicotinate phosphoribosyltransferase, putative family protein" /note="transcript TVAG_462280A" CDS complement(7378..8955) /locus_tag="TVAG_462280" /note="encoded by transcript TVAG_462280A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="nicotinate phosphoribosyltransferase, putative family protein" /protein_id="EAY18543.1" /translation="MQPADSGVPYTCAMLTDFYEVTICLAQWLKGRADKIVTFDLFYR TQPFKGSFAIFGGLEEAIDFIKSFRFTEDQLKYIQNNLPGVNPAFIDWLRKLDPNMLV IHAPKEGTVVFPREPLLRITGPMGLCQLIETPLLNRINFATLMTTNAARIRLLAKDRK LMEFGLRRAQGPDGAMSATRYSYLGGFDSTSNVLAGYKYGIPIAGTVAHSFISSYYDV NDPISHLMKHAVTGEDVDLLVHAEKCINENGWHTNQTELIAFIAQAQAFPTNFLALVD TYDTMTSGVPNFLAVSYALTRAGYNGKGIRLDSGDLAELSKQTRKMFKEFAEKYNIPE AAHYIITASNDINEKALLELERVGHEIDVYGIGTHLVTCQMQPALGGVYKLVEIDGHP RVKLSNDLIKVTLPGKKNLFRLYDIEGKAICDLLTLGDDEVIEPGKYTFFECWPNAQP FECTFSKAERLFHPAFEHGIVSVDDLNKARERVREQIHGGFRPDVIKIIDPAQYKVCL SPSLHQKLLQLIEEAKE" gene <10240..>12264 /locus_tag="TVAG_462290" mRNA <10240..>12264 /locus_tag="TVAG_462290" /product="Phosphatidylinositol-4-phosphate 5-Kinase family protein" /note="transcript TVAG_462290A" CDS 10240..12264 /locus_tag="TVAG_462290" /note="encoded by transcript TVAG_462290A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Phosphatidylinositol-4-phosphate 5-Kinase family protein" /protein_id="EAY18544.1" /translation="MSRSEYSELPAIGAAIDTGSKSFDRIYGMLLGIRVHVSRISSHP LEPVNEAAFHEYTKIDIPREGNNIAPAHKGNYDYKFKAYQPKVFRALRQFFGVSDVEY LVSLTSDYMMSELKTIGRSSAMFYYTWDGRYVIKTQTKDEMKVLQKILPQYFDHVTNH PDTLVNHFYGAYRSQTSIGRKIHFVVMNNIFPIGYQIHYKFDLKGSIINRSVDAAKRA HPGSTWKEAEFAEKRYMHVGPHDWVLLKATLLDDTRFLALAGVMDYSLLVGIHRFDSS HILHPAPGERIELWTVFIPDKSSYFQYDGNSFIIRKREEANGRRTKRHDIEPQAVSKL SVEDRIIPQAACLPYQGDDSNRLLNFCGGLRATNERDEPLSEIYFLGIIDFLQDYNAR KATEHALKSIIYRSNEMSCVDPQKYASRMFDWLCKNISPPAPIQPDAESEFLRRRQNL MRMASISTQPNPLIRNSVAIPLGSLNNTSNANLKVSNPAIAAKPPEEGESTPKPKKEH HHQHKSSKEKREQKSATLRVKPNANIADILVQEDKEAEREERMRRRAEKEEKRCRKAE REAKKAAKLKQQQENQEKSQEKVTNPEPQKSDNEKVKEVEPPKKSETPKKKKVRIASK DEPQTKKAEKPKPQSSDDEKKSKNEEEKPKNEENKKKEKYSKSSKSEDQE" repeat_region 12276..12312 /rpt_type=tandem /rpt_unit_seq="ttta" /satellite="microsatellite" gene complement(12390..>12858) /locus_tag="TVAG_462300" mRNA complement(12390..>12858) /locus_tag="TVAG_462300" /product="hypothetical protein" /note="transcript TVAG_462300A" CDS complement(12484..12858) /locus_tag="TVAG_462300" /note="encoded by transcript TVAG_462300A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18545.1" /translation="MYAGGIKAISPKGLIDLIKGGKKLKILDVRDVDFGEHAVIKNAI HLPLNEHTETNISKIVDSSIKEKIDKMVCYCHTGPRSVFSADLIKKEMKTLDEKPNFD VEFLKGGILGFIETEGYREFVE" gene 13891..14585 /locus_tag="TVAG_462310" mRNA 13891..14585 /locus_tag="TVAG_462310" /product="hypothetical protein" /note="transcript TVAG_462310A" CDS 13896..14522 /locus_tag="TVAG_462310" /note="encoded by transcript TVAG_462310A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18546.1" /translation="MGDCCKATTFLISCCILIGAVGSLIAYLLGKYWKILSDTNFKKI RLWLIVALAVIVVLLILCILLSLCNSKFSRNLVSIILIIFNLVILAIAIIVFIFGKKV PTIVSDKWTSGNLGVLIQNTFKCCNFESHKEYKDNCSKDYLTVDCKGKADKVASSVNT VGGILIGIFVGFSLIIVILFWIACKSGDNDDSAIPTKDQFNTPLTYGW" gene <15564..>17183 /locus_tag="TVAG_462320" mRNA <15564..>17183 /locus_tag="TVAG_462320" /product="ankyrin repeat protein, putative" /note="transcript TVAG_462320A" CDS 15564..17183 /locus_tag="TVAG_462320" /note="encoded by transcript TVAG_462320A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY18547.1" /translation="MAVQDIKINQFIELRNMFKYHIDAYIALYQLKTEKEEELNSIYN MIKTELIDSRKYCPNNIIRDILFIIPYNNRYTKSYLYLAKLITNDYHIKEVNHINHIS NLLFYKEYGIKINNEDDFENLKSLNILNENTIYRAIMYNDIEMFIAFIEKEGFDENQR LQSKLYPDSKKGYTLLELCCYYGAVDCFKFLRSKFNSEITQKCLKFSFLGKNPEIMSE CLKYQEINYKIMKYAIISHNIDFIAFLMNEHQLDPDIVSCGTYNNLESFLIYFLRTNN INKCFITSKMFNAPSVCEYFLTLGADVNIKDREGNTALHIASFFDSKEMAEFLLLHGA NINVRDKYGETALHIAAYNNSKETTELLIAHGANVNEKNELEETALHCAASNNSKETA EFLLSHGANINDKNYDGETALHSAAAWNCKEVAELLLSYGANNNEKDKNGGTPLHKAA KCGREEVAKLLLSYGANNNEKDKNGKTALHYAVENNKREMTEFLYYHHANINEKDNYG KKALHYAVCNKHNEIARFLISHGSNNNCRIL" gene <19142..>20338 /locus_tag="TVAG_462330" mRNA <19142..>20338 /locus_tag="TVAG_462330" /product="hypothetical protein" /note="transcript TVAG_462330A" CDS 19142..20338 /locus_tag="TVAG_462330" /note="encoded by transcript TVAG_462330A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18548.1" /translation="MSRKQKKDSRFDDLEVEERHPPVDMYGIPNEYAENYVSSSDEEF PDEFKKYEFSSSDEEITTKESTSRLAITGLYWEKVKASDIFAFINYSLSSDDTLNSVS VYLSHYGEEHLEDFKKDDIPDDEPDDVRAAAFRYRQKVLSKCYFAVAEFTDSKSADDA YEQLSRCEFGNTGNFLDLSVIPDDVDFSAFKLRDMAKEVPADWDMPNINAAWNTNTKA EDDWDTNPVERVAAVNSIWEDDLDEDAQNEVASILIGSGSEDDERPTRESLLGTLKAL AEEEEEEEEQKEMDDMVFEFVSHAGPDKKKAKKQKEEEVEEEEINEEKKKEEKRQKKK EKKEKKQKQSVDDEEIVDQIMNDDRFKDVIEQSGYGIDATASNFKNDPAMDKLRSKIA RQHHGK" gene <20897..>22426 /locus_tag="TVAG_462340" mRNA <20897..>22426 /locus_tag="TVAG_462340" /product="hypothetical protein" /note="transcript TVAG_462340A" CDS 20897..22426 /locus_tag="TVAG_462340" /note="encoded by transcript TVAG_462340A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18549.1" /translation="MFDYDDLMQNPDYLDLLDVVSTYNAWVPNYQAELLDCMIFLSIP TNVLPLALQSVLSFNNCDTLLEVSISLNNFKWSRQPNQVTINHPQFHKNFVGYNLIQD LIPNFFSPKYYPRQNYKSAVSLLACHGNYTHAKLNVLVAEGFDYQRSETALILAKDDI NVAREKLRTGLAQVDTMPINSTYAECPLLYFVLEIIEVFLDLPDHCCICRAPIQDGSI KPLVCTNPACIHKFEQNGIGVSVIQEIKRDPLVADLLISCFATSAGSQFLNPAPPPEL MNYSNQLANLPAMNNITRLNNDQELKNMIGNNLFSLVKWIILSNKSHFIHLPQQMMLQ QIRSPDHFLAIISSPEREYRFRALKARYGSMFLWHGSEGKRWYPILRNGLRNLSGTNL MRVGQAYGAGIYLASNASTSSGYVVNSPNNYRNSSFGQNLTLIALCEVAKVPALKDHG NGILTCANEDAVNIRFVFTNPMAIGNVDTVRNQLTNVPSLRDVLNAFATKAMQNQNRY Y" gene <22955..>24379 /locus_tag="TVAG_462350" mRNA <22955..>24379 /locus_tag="TVAG_462350" /product="hypothetical protein" /note="transcript TVAG_462350A" CDS 22955..24379 /locus_tag="TVAG_462350" /note="encoded by transcript TVAG_462350A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18550.1" /translation="MKVFNNVGAVPFVVGETRSKEEIEESAVWQKLTETKIIQFNASI NRIKFSPLDPNPLVVLSGLTGPWINGKSYTQDFAFAKAKAQFSAVAFRNDGVLIALGR EDGTVDIYPTKDHQTLLRRFKLHSGIIHDLAFSPFSNTVVAACGDGTIQIMDVSGAND VVVIKAHNDAVSSIIPMESGNIWVSGSHDKTVGIWDLNKQEKIGSIETENPVSNLVAK GRRVFAASSENVVAIDILAKITKVGTFTLHNRPIVGLTIVRSNLVTASSDRQIKIIDP ASFTVLYTIKMHSDIVSIAALPDATKFACALSGGVLQIRHLPEKSQNKTERPQVQMPA NFRVFRPPQNQRKEKWNQCLIRFEFAEALDYALKESDPAIGIGMIDELDRLGGLDAAI AGRDAMGVQPLLKFLIANVSNPTWSSVVLKAVIVFERIYRRVIGDVPAVGKMFDELSS KIGEELKEQRRAAMLIGKIDLLLK" gene 25998..27227 /locus_tag="TVAG_462360" mRNA 25998..27227 /locus_tag="TVAG_462360" /product="D-isomer specific 2-hydroxyacid dehydrogenase, putative" /note="transcript TVAG_462360A" CDS 26007..27191 /locus_tag="TVAG_462360" /note="encoded by transcript TVAG_462360A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="D-isomer specific 2-hydroxyacid dehydrogenase, putative" /protein_id="EAY18551.1" /translation="MKILIADTLAQRVVDTLIKQGHQVKMDPTITEDSLANEITDYNI LIVRSKVVNAHAIENARALSLIIRAGAGVNTIDVNAASNHGVLVTNTPGQNNDAVAEL AFGHIIACDRCIPQNTMHIKNGEWRKKLFLNSTGLRDRTLGLVGCGNISHSMIHIAKG FNMNVAVYSIPFSPEEAKSLGVQYCGTLEELAKIADVVSVHVPYMKETHHLINKQFFD AMKKKAIFINTSRGEIVDTVAMIEAIKEKGIKVGLDVYENEPAGSFGTFQNNQIAEVV TSATCHIGASTQQASERIADETIRIVNTFVETGEALHCVNIDQSPKVDGVLSVRHNGV FGKIIACCEEHGAKIMSVNNDVLKGDNCQIAAIRMKVPKSFADEITKIEGVIGVSCKM FD" gene 27391..28053 /locus_tag="TVAG_462370" mRNA 27391..28053 /locus_tag="TVAG_462370" /product="small GTP-binding protein, putative" /note="transcript TVAG_462370A" CDS 27410..27997 /locus_tag="TVAG_462370" /note="encoded by transcript TVAG_462370A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="small GTP-binding protein, putative" /protein_id="EAY18552.1" /translation="MTKVILVGSCGVGKTSIVKVITSGLFEEEYNPTVGAEYNLKVLG PPGEEVKIQFWDTAGEEKFQAMAPIYYHDAKIGLVVFAMDDQYSFDRLISWINSINDN TEGVRLIVVGNKSDKEDKAVKTEQAISLANEFKAEYVEVSAKTGARIQDLCDIISDLA KEKEAEINQKQNEQQSLKLVSESSTQNNQQGSKCC" gene <30788..>31954 /locus_tag="TVAG_462380" mRNA <30788..>31954 /locus_tag="TVAG_462380" /product="Kelch motif family protein" /note="transcript TVAG_462380A" CDS 30788..31954 /locus_tag="TVAG_462380" /note="encoded by transcript TVAG_462380A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Kelch motif family protein" /protein_id="EAY18553.1" /translation="MGGNESAMAGAHGTPSDMCLPVVGTRMNDEKVMSQLRAASQLKT PTKRNHIVRTAFTAIWSQIQPNGPLTPHSRVGQFYSTCTELGIAITGLGITDDNTYLN DIWALNQQTLTWTNLQITGDQISPRANARATCLGHILYIFGGACEPVFYNDLFSIDLT TGQCTLIQTTGDIPSPRSAPIVGGLDGKIYVWGGYDSLWPSDLHVLDLSTNVWKAYPQ EIQGRTGVGYTLVGDKIYCFGSAKTGGLLQIDLTELKVSLVQTTGAEPPSSLANSSMI FFDHYLIVIGGKFHVDWTLIYACDITRFWWFVLHVLPDGETVSQTDGCVSDLGLFMLP RAHSMGASWCPTRREIVTFLGFPTKDPPPLYILSVGEAMGVLNMRSDMLEMLKH" gene <32364..>33428 /locus_tag="TVAG_462390" mRNA <32364..>33428 /locus_tag="TVAG_462390" /product="hypothetical protein" /note="transcript TVAG_462390A" CDS 32364..33428 /locus_tag="TVAG_462390" /note="encoded by transcript TVAG_462390A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18554.1" /translation="MQIKGEDWFKHYAGFEEYVKGVYENMVLTENDGFCQIQSKINGK TFNCGKFTIRTIDSFNLEPIGNGKLHIICGKGRYSKRMDLVDVLQMQNNPDFNGATFL AASNFNCLEFPSAKSRASHGIRFYAVDVTQGPTLSIASFGAILYRNYFLPYGKTQENV DDEINLLDSTPIFVNHGKACLSTDEEMKLVENFDFSNENLYKIGVHENVEVTTNRLQQ FNYIDAKPDQYVHQVFAASFALGSYVARNERNLEILSEILFYEYKLTILAAWENSLKY PDRAGSKKCVLTTLGMGVFNNPPEIVGNAISKCKDLILESGLDVYVVCFSDNNRDGFG AIYPHLKDAIESTQGTVIYA" gene complement(<35951..>37081) /locus_tag="TVAG_462400" mRNA complement(<35951..>37081) /locus_tag="TVAG_462400" /product="Prenyltransferase and squalene oxidase repeat family protein" /note="transcript TVAG_462400A" CDS complement(35951..37081) /locus_tag="TVAG_462400" /note="encoded by transcript TVAG_462400A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Prenyltransferase and squalene oxidase repeat family protein" /protein_id="EAY18555.1" /translation="MAEWVPYLEIFDDENIQTKTSIDQINTEKAVSNAQKGDKTVLRI PSRDYLIDKIVHLGKSYQNFCYQETWLPYWFLNSMYVLKLHKIGGFDFFKDSIIKYLS KRTSYDGGYASSPDQKGNIILTYTAINSLAIIGTEKAFSSINRSEIYNFLKQSKQPDG SFSAGAALESDSRSTYCAICVASLLNMLTPELLEGTVEFLISCQGYDGGFGPRAHCET HGGYGFCSLGALSILNSIDKINVEKVINWCAMRQTSYAGGFNGRTNKLVDTCYTWWVG AMCRILSDEFKIEPFWNQEGITNWVLSVCQHESGGAFDKPGVNPDLFHTMYGYIGLSA SANDYLKKQGGFELIDMDARYAIPKESVEAIKNYFANNPFTP" gene complement(37422..37492) /locus_tag="TVAG_462410" tRNA complement(37422..37492) /locus_tag="TVAG_462410" /product="tRNA-Gly" /note="anticodon GCC" gene <37581..>39374 /locus_tag="TVAG_462420" mRNA <37581..>39374 /locus_tag="TVAG_462420" /product="Leucine Rich Repeat family protein" /note="transcript TVAG_462420A" CDS 37581..39374 /locus_tag="TVAG_462420" /note="encoded by transcript TVAG_462420A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Leucine Rich Repeat family protein" /protein_id="EAY18556.1" /translation="MDIFCKNCGEATKFNICPKCYNAYTQPSDKYISHSFDTSLNSFD IPKSVQILDLAGTSLSKIDWKNHDDLKILRLSNCEKLESISLLNFRGLKCLDLSNCPK LTKISLESTYNIRTIDLSNCISLKKFDCDMLAVEYMSIANTQINELGYYPIITYLDFS NTKITDISALSSFSMLENVKFNNVPIQSCDLGPLTYIPKLSAIETNIPEVTFSSVSPS TLLVSLYLKDCKSVTKAPKLRNFSLISPKGKFGREFKVPISSGDWTSPYRLIFGPYPS PPNEKIEIDVQNIQKMQHPEFDGTVAANQISGLFYGAIFGEIFGRNINGLTKEYITFI LDNPIDITWARMVSMTGEKSVKDSFSDDFKKNLINLAKFAVTGEIEKVENDFDALLSS TLVASYLFWDEEKLIEKIKIILGKSEFPEEIKFSCILIALLIANLLQQRLKLAENIKI DEIFEKTLKFADIADKSIYETCISITKLSELKNVSEKLTPAAAAVFSIRKGYSWSEGF SKVIYRGGNTLTNSIVTGAVLGARWGYNNIPIDLIHFLYRRNFLDQTVSCVFGSLDIS RKELNWDELPGIKWEPEEDTIPDPFAYQKME" gene complement(39575..>40293) /locus_tag="TVAG_462430" mRNA complement(39575..>40293) /locus_tag="TVAG_462430" /product="small GTP-binding protein, putative" /note="transcript TVAG_462430A" CDS complement(39712..40293) /locus_tag="TVAG_462430" /note="encoded by transcript TVAG_462430A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="small GTP-binding protein, putative" /protein_id="EAY18557.1" /translation="MEEIETYTLVILGSGAVGKTSITIQLIQGRFSAYHDPTFENTYT KYVNIGGDEIKLNILDTAGQDDFECMRDTYIRQGHGFLLVFALNDMQSFDKMIEIYRR IKEIKDSYTPPVLICANKCDFPTWEVNKENFIDFCESQKLKYNFTSALTGENIVKSFE DISKMMRKQNPDSNYGKSKPKPSKDEDANCCRI" gene complement(42331..>43600) /locus_tag="TVAG_462440" mRNA complement(42331..>43600) /locus_tag="TVAG_462440" /product="hypothetical protein" /note="transcript TVAG_462440A" CDS complement(42563..43600) /locus_tag="TVAG_462440" /note="encoded by transcript TVAG_462440A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18558.1" /translation="MSDLLDQISQIQKKGKKSKKQNKNKESNKESTEGGSNVIHLNSL EALAEKARDLKFEVKRTERDDDDDAPQEVFKFREEKKGPQHAIILAPTTIRLDVNDVR AIFPNMSIAKISQEFMYFIIEFTKEEDRKLALKKNRMQFRNGVILIDEYELSQENPQA SRGYQPSYGRGSYSGYGDDAYGERSFQRKQQPSPSYQPFTGQRKQQPNPPTSDGGYGS REGGYDSYGRDSGYGGGYGRDRYGGGGYGRGGYGDSYGGRDRYGGGGGYGGRDRYGGG GYGRGGYGGDDYNRGGYGDRQISVGGRQQPNSYAPAQPAAAPDPNKKLTFMEARRLKQ QQEAAQQENPQ" repeat_region 42745..42923 /rpt_type=tandem /rpt_unit_seq="ccg" /satellite="microsatellite" assembly_gap 43709..43808 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<43903..>44511) /locus_tag="TVAG_462450" mRNA complement(<43903..>44511) /locus_tag="TVAG_462450" /product="small GTP-binding protein, putative" /note="transcript TVAG_462450A" CDS complement(43903..44511) /locus_tag="TVAG_462450" /note="encoded by transcript TVAG_462450A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="small GTP-binding protein, putative" /protein_id="EAY18559.1" /translation="MSRRMSSLDLKIVVLGSAFVGKTSIINRYCNSTFIEDTLSTIGA GFFTRTMNIDGTEVTIMLWDTAGEERFRSVAPSLLRGANGLVLVYDLTQPNSFKDIDI YMEMFLDTCNVDPTYTLPVLLLGNKCDLNRVVSVDTVEEWKRKNKVVFSYEVSAKTGE KVEEAFQKLIESLVSPAANTDNTPIQIVINPGNPNKQNTGCC" gene complement(<46558..>46773) /locus_tag="TVAG_462460" mRNA complement(<46558..>46773) /locus_tag="TVAG_462460" /product="hypothetical protein" /note="transcript TVAG_462460A" CDS complement(46558..46773) /locus_tag="TVAG_462460" /note="encoded by transcript TVAG_462460A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18560.1" /translation="MAAGIFKKLWDKVKRGASKVWETLKKGANWIFKNKEAISDVAES ITPKAAPIREVLNKGEKVYQRLQPILR" repeat_region 46843..48483 /note="repeat family R40b" gene <48508..>48840 /locus_tag="TVAG_462470" mRNA <48508..>48840 /locus_tag="TVAG_462470" /product="hypothetical protein" /note="transcript TVAG_462470A" CDS 48508..48840 /locus_tag="TVAG_462470" /note="encoded by transcript TVAG_462470A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18561.1" /translation="MDLNSSTPYEELAGVYNTYVDDMINEALSDNRNALSKEKLMKIP YSECYLNSITAAIGKQNKGKTLTIIKQLSLLXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXI" assembly_gap 48733..48832 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 50213..50312 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 50360..50896 /note="repeat family R410a" assembly_gap 51577..51676 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region complement(52836..53945) /note="repeat family R524a" gene complement(55202..55903) /locus_tag="TVAG_462480" mRNA complement(55202..55903) /locus_tag="TVAG_462480" /product="Rac1, putative" /note="transcript TVAG_462480A" CDS complement(55292..55894) /locus_tag="TVAG_462480" /note="encoded by transcript TVAG_462480A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Rac1, putative" /protein_id="EAY18562.1" /translation="MKHIKCVVVGDGAVGKTCLLISFTTNAFPGEYIPTVFDNYSANV MAEGHPPVNLQLWDTAGQEDYKKLRPLSYPQTDVFLLCFSLVYPASLENIETMWIKEI KEYCPDKPYILVGLKSDLRDEFDQRADELRAKGFEPIQRAKGEEMAKKINACSYIECS ALKAYNLTEVFDEAVKYALDPPAQQNQKQEKSDTNCCELI" gene complement(<57754..>58083) /locus_tag="TVAG_462490" mRNA complement(<57754..>58083) /locus_tag="TVAG_462490" /product="hypothetical protein" /note="transcript TVAG_462490A" CDS complement(57754..58083) /locus_tag="TVAG_462490" /note="encoded by transcript TVAG_462490A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18563.1" /translation="MLNICCLYFPKINIITYFVLVSLGGVLMLALMAILLSKGLSANL GNLVHPKEEIIKTLWINAIIYFILCILFSILFFYRFMRPASVDQKQVEDDNAEIRSLR ETHTAQE" gene complement(<58398..>59033) /locus_tag="TVAG_462500" mRNA complement(<58398..>59033) /locus_tag="TVAG_462500" /product="Tyrosine phosphatase family protein" /note="transcript TVAG_462500A" CDS complement(58398..59033) /locus_tag="TVAG_462500" /note="encoded by transcript TVAG_462500A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Tyrosine phosphatase family protein" /protein_id="EAY18564.1" /translation="MEISGDVLIPPFRFSAVEIDVFRGAYPVKLNFGFLKTLKLKTMI SLIPNPIDEDLAEFCKNEKIENHYFSVPKFIDQIIMTPNTVTQILNLLCDKNNLPAYI HCLNGGHSTGLIVMCLRKLQMWSQRAMFAEFNRFINTFESCEEAFVNNYKATFELTSN RPQWLMHLTGKKSHPTLRVILANETESDDEIDDEEEDDLISSTDEIKIRNE" gene complement(<59370..>60425) /locus_tag="TVAG_462510" mRNA complement(<59370..>60425) /locus_tag="TVAG_462510" /product="hypothetical protein" /note="transcript TVAG_462510A" CDS complement(59370..60425) /locus_tag="TVAG_462510" /note="encoded by transcript TVAG_462510A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18565.1" /translation="MFLEPEDEFQQPEYLQQQKNILILEINQLKSEIQPLSNKYNQLL EEMNKNNTSDSDQKSSEFSQENYISSQLKELHQENDILIEDLAKLRRNYSTQMEKSLN SDILYQKQCLEQLQIETNQCTSLNDKIRAQLDEILKADYTYLIQEHKKSIDLLKSQLS TLQADESKMIQSYMEITNDMSVITEMERTVSQKRSQLKNLEHQKMRINLELRRVKKDY EFQVMRLENEIAEKENSIRNKLSRDNWRKSMSSYSKSKSSSNSSKMELNSTQENNSQS NIKVEEPQSPLLQSPRVKFHESTVGHGIPLDYAIANSIIRPEIVDDDKIVFNNTDNVD EDDLLDLEPLIPSMIKK" gene <61062..61666 /locus_tag="TVAG_462520" mRNA <61062..61666 /locus_tag="TVAG_462520" /product="hypothetical protein" /note="transcript TVAG_462520A" CDS 61062..61628 /locus_tag="TVAG_462520" /note="encoded by transcript TVAG_462520A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18566.1" /translation="MEAAKAFAKHLYDHLLPYEDQITKFEATIAFGAAKWRGAVFFVL INLVYLLFKYLAIPTYSGLAIIALLYFSRSMWTPIFFKIINPSDIGEAPHHDLKEISS WFATVILVAVNLYNSAISSVTEKRFLGICTNLFIFMFLFYLFLSIPDYFLGLLIMNVL ALTPFYLLKFDSCKNCILQKYHKSQKAE" gene complement(62026..>62486) /locus_tag="TVAG_462530" mRNA complement(62026..>62486) /locus_tag="TVAG_462530" /product="ribosomal protein S15a" /note="transcript TVAG_462530A" CDS complement(62094..62486) /locus_tag="TVAG_462530" /note="encoded by transcript TVAG_462530A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ribosomal protein S15a" /protein_id="EAY18567.1" /translation="MVRTSVLADALKAITNAERRGMRQVLIRPSSKVIIAFLKVMASR NYIGDFEVIDDHRSGKIVINLLGRLNKCVAICPRFDVGLGDLEMWQAKLLPSRQFGYV VLSTDKGIMDHEEARKHNAGGKILGMFF" gene complement(<62615..>63418) /locus_tag="TVAG_462540" mRNA complement(<62615..>63418) /locus_tag="TVAG_462540" /product="CMGC family protein kinase" /note="transcript TVAG_462540A" CDS complement(62615..63418) /locus_tag="TVAG_462540" /note="encoded by transcript TVAG_462540A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="CMGC family protein kinase" /protein_id="EAY18568.1" /translation="MEISEVFTNATKIGKGTYGTVYSAIWTSTNEVVAIKKMKIESSN EGIPCTSLREIAILNNFKHKNIVECKAVMHSKNSIHVVFEYCRWDLRKFIKKENYSIQ YSQVISFTKQLLAGLNFLHMNHIIHRDIKPQNLLITEDLCLKLADFGLCRTSNIPTKK LSSEVITRWYRPPELIKGSTKYGCEVDIWSAGCVVAEMLTGSALFPCDSNEEMLNEIE FTLKNDFQILYQKLNHCDNGMFELITRMLDQNPATRITASEALRHRALS" gene <64367..>65296 /locus_tag="TVAG_462550" mRNA <64367..>65296 /locus_tag="TVAG_462550" /product="hypothetical protein" /note="transcript TVAG_462550A" CDS 64367..65296 /locus_tag="TVAG_462550" /note="encoded by transcript TVAG_462550A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18569.1" /translation="MPYKIEFKPGLYFIELWGASGGYYDSQPTLGGYGSYTSGFLPLM KKRILYIYLGQKGKFDGPPTFNGGGKGTYSPSKDSISGSGGGASDMRFIYGEWNEINS LKSRIIVSAGGAGSTDAVSSIVRGGHGGAISGYKGTQYRVSSSADTLTDATGASNVLG GISGLMSNKIPSSIMNGSFGIGANPFDAHYGSGGGGGDYGGGAGNVVNNCVGTGSGGS SFISGYKGCDAISQNYTLDNPVHTGKPYHYSGFVFVNPIMKDGNTVQYSGNGQARITV AYQEYFNIKQSCVNSYSISPHYFYLIVSIIIDC" gene complement(<65546..>66445) /locus_tag="TVAG_462560" mRNA complement(<65546..>66445) /locus_tag="TVAG_462560" /product="hypothetical protein" /note="transcript TVAG_462560A" CDS complement(65546..66445) /locus_tag="TVAG_462560" /note="encoded by transcript TVAG_462560A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18570.1" /translation="MEITTQDAIMVFDDQEYEAKEAFLYLQEIYSVSHPNIFHEILQH VRINENIDAYDVSWILRFIGRACKYSFLEKCADVISSESYDEYVKNILGQKKNELLRF EKPQYVHQASALAASSSPTKHTEVPNNPNSSFNRIINMLKKESQLSTNNTNIANSARS NNGENVYHIAAKDLNISLLSNIIKANIDKKLINQIDNDGNTPLLAALKTKSTNSKNDV VTQLLKANGDPNIQDKDGNTILHLAAMNKDAALYTIITTLCDNADDSLRNNAGQTPME IYPLLKPKKISGFISLSSADSTI" gene complement(<67301..>69361) /locus_tag="TVAG_462570" mRNA complement(<67301..>69361) /locus_tag="TVAG_462570" /product="UvrB/uvrC motif family protein" /note="transcript TVAG_462570A" CDS complement(67301..69361) /locus_tag="TVAG_462570" /note="encoded by transcript TVAG_462570A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="UvrB/uvrC motif family protein" /protein_id="EAY18571.1" /translation="MDPESLDYTIVSCSSEDPHYPITSIQNASIRSNGWQSQQNPSYP VSFVVDLGSKAEIKSLQFVSHQSKIPARVDLSYGDNGTLFKPLGSFQFSDNSQTGYSA RELKSANLSKVSTRFFKISIRGCHTNASNPFNQVGIVSLKILGNGGRPASSQRPTTPE LDLEQEINKLERQKADAVAREDFSEANNIKIRLNELKSQKETLENLKKRKAEAIAAED FEMARIVNDQLKAFNNKDYRPYTTQAKPREEIVKYDNNYNSARHEKQPPKNIEPPRGR QIPNDDDDNSPIPSSKDYELPDSFDNDASPAGCAIPRDSDESPRPGRSIPRDNDDIPP PGRSIPRDEKDVSRRDHRIIEPVEDDEDQVQDLEEEPPEPAKPMKKGKYGMTRPILGG NMDQAPPQNDYEPADLSEERPIHPADDYNEDPNGGLRGITEDSSTPDELTPASRQEAS LLISKFGEDAVARFYSKNWQLRIEGINILGKRIKELGQVSCYEAFCCFCKIMRFRMSD TQKAIVSDGIQVIQDIADTNVIQNGDLARAVQSMLAPMATRIGGNSQPISEAVCNFLV FLCSNGCSDIVLPIIYGGKKNSANWKSLQARISCLHDIVLFLGMDAADGLSLDQMMKL AVEGLESAKSEVRLAATQLVVTLEEMAGSAIEKYIEKIPKRTREEVSKAIEQNHQKNQ NEEM" gene <69459..>69800 /locus_tag="TVAG_462580" mRNA <69459..>69800 /locus_tag="TVAG_462580" /product="hypothetical protein" /note="transcript TVAG_462580A" CDS 69459..69800 /locus_tag="TVAG_462580" /note="encoded by transcript TVAG_462580A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18572.1" /translation="METIVVPHGKKIKVTVPTDEETTLVINGASISVKKEIPAKGRVV LYMSSIENGKPGSEIAIAPFTIGKSETCKLDFLFEAGNQFILSTKGDNVDGVVHTYIP NFEKLEIETLD" gene complement(<69917..>72745) /locus_tag="TVAG_462590" mRNA complement(<69917..>72745) /locus_tag="TVAG_462590" /product="hypothetical protein" /note="transcript TVAG_462590A" CDS complement(69917..72745) /locus_tag="TVAG_462590" /note="encoded by transcript TVAG_462590A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18573.1" /translation="MGENIATISPPFEELETFNTWYNVTVQAKGKMKNGQYDIKQNGP FLFFIPRSPPHKIEFLIFTLNYEIIEEGNNDIAMVRLEHIYDTDIFHLLILNKDNVKS FIDAFKTARSELLFTFSNLRYTECQLENTMYFSCLSNTNQILESKIGLSETLDGAFNL NCVIKTRTGWDPKLDIKLSANTHVEPALTAPDTFGTAPQLAHIFHVKHQKHINDKPEE CFVICTSIETLMHSVLSIAKWALDASKRPRISDSSDIFNLNPRPQETPQPKTEPTAKP SLLTGLFSKIKQELKGDSHHNEKPPQPVQKVPQKGTTPEIRQTIQNNPNQNKIEQITQ QKPSLQPEKNKLQLNPVKPSIQISQTTSQTLNSDSNIKKPVLSISVEKVSTKSNDQEL ADHTEPEKTSKLQEREKNIQSLRVDTILPPPNIARNAHAHTVSYTSTNPPANQYQDIT SPKPSLATAASMSHDVVNSHGRRVSYQRRSSAQLSPEIQKSIDESNIIIQEQVNKIKH SFPEPINLEKEYKKMKKSQETKKEVSEYKPSNLTLFLPKNSSNERLSEIAKNEIFSEL AKSTIDNTMFSSLDQIVEISEAQVINETEKTFLDRFSTDFSFFDFDKVTLDQRFDLYS LKNPSYSQCEFFTGYAEIAENLAQLGDGVTTIEDASKFIYYTASVFINGLNDNFITAY KELEERIDFIKKPLINASNYKNPLEQSSIFVQDLILSNEIIPFLYLLSNDISFISKHY NPYSLLMDEEYTLYVYTSIDRIMATNKFSFTPDAAKPINFHKELNPFIPYMLPQYQHS IDRFAKDFGGGEEMLKSFVKCVVSLIQSGHYNDDAWKFIEDVVKNNDYKEIKEWKGFV EAKNKFGYNILSHAKNLEDFVTIGVKSKVMHIWFTFMIISWQTSEQYYPDASIMRDYK RANHVVAVIEKVMSMVKTEDNHSDDISK" repeat_region 73345..73471 /rpt_type=tandem /rpt_unit_seq="aaatg" /satellite="microsatellite" assembly_gap 73556..73655 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 73794..73949 /rpt_type=tandem /rpt_unit_seq="atatg" /satellite="microsatellite" repeat_region 73900..74180 /rpt_type=tandem /rpt_unit_seq="aaatg" /satellite="microsatellite" repeat_region 74233..74402 /rpt_type=tandem /rpt_unit_seq="aaatg" /satellite="microsatellite" repeat_region 74450..74615 /rpt_type=tandem /rpt_unit_seq="atatg" /satellite="microsatellite" repeat_region 74492..74658 /rpt_type=tandem /rpt_unit_seq="aaatg" /satellite="microsatellite" repeat_region 74821..74983 /rpt_type=tandem /rpt_unit_seq="aaatg" /satellite="microsatellite" gene complement(<74957..>75463) /locus_tag="TVAG_462600" mRNA complement(<74957..>75463) /locus_tag="TVAG_462600" /product="hypothetical protein" /note="transcript TVAG_462600A" CDS complement(74957..75463) /locus_tag="TVAG_462600" /note="encoded by transcript TVAG_462600A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18574.1" /translation="MDKDCLRDIVCSHNNEMLEYVLERNIFTYKDFDGENSNSTAIYE DIIKYQNLKAVFLLFEREKNFIVPWCAAFPQTIDILKNEKLPDKIDFKKRNILQYACM SQNSDIFKLLFTSTDKIDVNYHDLDKMTALHFAAMYHNIDAARILISHGADVNAKNIL FHFTSIII" gene complement(<75714..>76016) /locus_tag="TVAG_462610" mRNA complement(<75714..>76016) /locus_tag="TVAG_462610" /product="hypothetical protein" /note="transcript TVAG_462610A" CDS complement(75714..76016) /locus_tag="TVAG_462610" /note="encoded by transcript TVAG_462610A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18575.1" /translation="MSSDYAKPYSDFIGAFEKLFLIKSNESVEDVCNIITNVLISKYQ ITKNQLSSIILKAFLYNYASRENYIKILKNIGFDNEVLSNLTFPLEDSVEFIVIHD" gene complement(<78162..>79181) /locus_tag="TVAG_462620" mRNA complement(<78162..>79181) /locus_tag="TVAG_462620" /product="CAMK family protein kinase" /note="transcript TVAG_462620A" CDS complement(78162..79181) /locus_tag="TVAG_462620" /note="encoded by transcript TVAG_462620A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="CAMK family protein kinase" /protein_id="EAY18576.1" /translation="MLKQFPETIHSYIFKKAIGKGGFSTVYLIESEEYHQQYVAKVTP IDDQPVKEGNVDPLDAEITALMSLSHQNIIRLYDHFTEGHNFFMILEYCQQGSLQDAV GEAGLSLPQFITYARQILSALAFVHSKNIAHRDIKPGNILLDNSGHIKLSDFGISLRN ANNVVSTFSGSLLYEPPEIVLKKPHNPMQADIWSLGVLFAFLINGCTPWHCDSINTLK TRICTATYKLKTNTPPEIVDIITRMIVVDPNERPTAQELLNEKIFRKDSSDSIPSESE EIQDVLSPKARAMKQSIPRNKTSYNAMSKAIGIFKMNLAVGNNRLPRIKSRYHSELSD TFVNA" gene <79865..>80794 /locus_tag="TVAG_462630" mRNA <79865..>80794 /locus_tag="TVAG_462630" /product="hypothetical protein" /note="transcript TVAG_462630A" CDS 79865..80794 /locus_tag="TVAG_462630" /note="encoded by transcript TVAG_462630A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18577.1" /translation="MIYVFSLILNSQTYKAETQPDRGKPVTFKSEEFNPQLALIQNTI FLNLSHNGQGAAIAFYHEKCNACISSCFFEKCKSMLNGGAIYAHVSNISISNSYFSDC LVPKQGYGGQAFYLSARRQNLNFTTITNCPAKVELEGTESCVSINGVQQFLSFNSSFN HPSQYAAGILTLESAYFAMKYSNFINNTSPNQILSFLNMQPDNLITFINILKNEVTVD ALFYISSSIIVLENLIIFQNKGSLICQNIIFEPVIIKFLNSFTDFSNIPINYPGLKTK CSLLPTINIRTYRIPLNVSKLSAGKRKYFLTVY" gene <81207..>82841 /locus_tag="TVAG_462640" mRNA <81207..>82841 /locus_tag="TVAG_462640" /product="surface antigen BspA-like" /note="transcript TVAG_462640A" CDS 81207..82841 /locus_tag="TVAG_462640" /note="encoded by transcript TVAG_462640A; Probable pseudogene - evidence: frame shift" /codon_start=1 /product="surface antigen BspA-like" /protein_id="EAY18578.1" /translation="MYTVSEITDYAFYNLPAYQIFIPETIRKIGKYSFASDRLVKLDL SKMTFDVIPDFCFHDTRSLRVLKLPQYIRTIGYKAFFKSQISHVIIPRTVEIICSKAF CKSSVLELDFSNTHIEIFNNSVFENCSLLKSITLPRDLLQINNGCFAYSAIRELSIPQ TLQTIQEGAFEFMINLEKINYKIDKIREIPNKCFNGCSSLTSISLPNSIESIGNYSFA SCKFEKIIFPKSLKIIGNCAFKSCSYLQEISFQGINIKKIGEECFCKSIILSKVVLSD TIEYIGSSAFKCTMVSDMIIPKSILYIGKKCFSNCRILQKIDFTSTKKLTKFEDKLFY NCNSLETIIFPENLYFVGQNVFSFTKITNIKLNLQEIDILAFADMDKVQTIDLESSSF KVLSSHCFFRCLNLNSLKIPKTIEKIQENCFKYCPISDISLRDNLIHISKYTFSYTNF EVLDFSNCSKIMKVPMFCFQGSIWLKTVILPPNLRVIKDFAFYECTNLEKIEFPRNLT SIGIGCFGNCVKLESIDMSNLNVSVLSQICLKIVQN" gene <82868..83845 /locus_tag="TVAG_462650" mRNA <82868..83845 /locus_tag="TVAG_462650" /product="hypothetical protein" /note="transcript TVAG_462650A" CDS 82868..83767 /locus_tag="TVAG_462650" /note="encoded by transcript TVAG_462650A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18579.1" /translation="MMINETVFFNTSIKALKLPSSITNVSDFAFYGMFNLEKIDLSNT KVTKIFENTFSDCFSLKSIHLPTELAEIEHAAFLYCSELSFIYYCGKNDFSQHQIFSV KPKIYVTQDYPAHRFGMLRVRRSNICFSMNFRNKSKIIKIAPKVEPPRPNKRWQELLL ENRVDENPIDTGFIIKSDNDFENDEVEIEPPYSYDEEERDPTPTPQEPSRKKRKEENQ FNHQDQGENYFDDDEDNSAKFILIFVVFAIAVGILALFMQELRPKQMNANDIEAMNAQ SNTKKHKHSKKSYPDYDSSDSFQ" gene complement(83850..>84426) /locus_tag="TVAG_462660" mRNA complement(83850..>84426) /locus_tag="TVAG_462660" /product="Histone H2A-IV, putative" /note="transcript TVAG_462660A" CDS complement(84007..84426) /locus_tag="TVAG_462660" /note="encoded by transcript TVAG_462660A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Histone H2A-IV, putative" /protein_id="EAY18580.1" /translation="MPAKKGVKKTATKTAVDGERQHPKTRSSRAGLQFPVGRLHRFLR EGRYGERVGAGAPVFMAAVLEYLTVEVLELAGNAARDNKKTRISPRHIMLAVRNDEEL NQLLSNITIASAGVVPHIHKVLLGNPKKGKDASQTQE" gene <85546..>87060 /locus_tag="TVAG_462670" mRNA <85546..>87060 /locus_tag="TVAG_462670" /product="ankyrin repeat protein, putative" /note="transcript TVAG_462670A" CDS 85546..87060 /locus_tag="TVAG_462670" /note="encoded by transcript TVAG_462670A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY18581.1" /translation="MIQACKTGNIHLVQSLLQKGVKVDVADSEKWTPLHYAVMGKFNE LVVFLLQNQANPNMRTNAGLSPLHVAAQIDDDIILTALIENGADIKLEDNKKSTPLHY AVANGSLSCINILLDFGASPDVFDESYCSPLHYAVQNNNVDALNLLLKFGANPGIIFN PDRASIGTFFWAPLHLAVQHNLINIASILIECGADVNVVNKQRVTPLHLAAQYKSTEM IQLLKDNGAKLNAKDIDNDTPLILAIRSHQKQNIELLLDEKTINIQNSQGQSALHIAA QYAFGDILKELVINGADVNAADIDGNTPLHCATIAKSSECVQILLDHGADAKIRNHKK LPGGKMIVNGGVSPFVLANTEIGKLIRNNLNQEITETPTSNTPIRQSPSRASISLSKS PSHKSGLNTPQKSPGKSPHKSPAKSPGASPAKSPTKSLTRGQNTKSNIERKQKVVVYT SKKEELIKKDAKTLGELKKQVNNAIAETREHMEGRLKEIQVLIDQIQEDFNNTK" gene <87261..88854 /locus_tag="TVAG_462680" mRNA <87261..88854 /locus_tag="TVAG_462680" /product="Clan SC, family S28, unassigned serine peptidase" /note="transcript TVAG_462680A" CDS 87261..88817 /locus_tag="TVAG_462680" /note="encoded by transcript TVAG_462680A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Clan SC, family S28, unassigned serine peptidase" /protein_id="EAY18582.1" /translation="MFLSLLFLRKPPFRTYLPGDTYYFDQFLDHFNTSDNRTFKQRYY YNDTFCQNTTTKKLIVFIGGEAAITERRVQKGAYMKLAKETDSCVVALEHRYFGESQP FEELITPNLKYLTSDQALADLAYFIESFIKIKYQSRPTILVVGGSYPGTLSSYFRMKY PHIADFSWASSPPLYVKNDFWEYDAHCAEVLGKISPKCLTNTKLIYDDFNDHPDHITN YIPFKPSVSHVSQLSILSDFIAGIVQYDNIYKLVTPYCENQNGDSPNYDSFHDYFYKY LEVEGVEDPSDLDDFALTNHSIHTDYADSLSWTWMTCNEFGWFQTASGQLRPAKVDLN YSDLVCRTYFGVGISPDIDNNRSAKMDIYNAQNPATTMIYFSNGKTDPWSVLSVSENV QNPPVGRYSVQINNASHCSDLGDEAAGEPEALTVARKQIMDTMARWLNHPDGPNCSSH GHRVLDGCVCERGYEGPDCGLKVISPGLFKVFDSLVVLLPTLMMIIIGCSAWFLFKKD GEDTEIKTIP" gene 89285..89990 /locus_tag="TVAG_462690" mRNA 89285..89990 /locus_tag="TVAG_462690" /product="ribosomal protein S3, putative" /note="transcript TVAG_462690A" CDS 89297..89947 /locus_tag="TVAG_462690" /note="encoded by transcript TVAG_462690A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ribosomal protein S3, putative" /protein_id="EAY18583.1" /translation="MKAQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTP TRTEIIIKAANTKEFVDNHGRRLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQ LESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKLRGARASTSKYKEGYMVK SGDVTKQFVTQAVGHIPMKQATIGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD" gene complement(<90103..>90702) /locus_tag="TVAG_462700" mRNA complement(<90103..>90702) /locus_tag="TVAG_462700" /product="hypothetical protein" /note="transcript TVAG_462700A" CDS complement(90103..90702) /locus_tag="TVAG_462700" /note="encoded by transcript TVAG_462700A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18584.1" /translation="MSVDFEGYALEDSEKHSFSEYPTVDEYMDKNMAFKEGTFNNYDQ IQKGWIADYYNYMVEEEKSGINIDESCRKYYRTKYHTPIYDEDKLKRPEWKSNSSYKI QRIEMKWNFHGTSALFKKSLIIHLLMNLNPDDEVVYSYTFKSSDNELFRSDVLRIVSE TMTQLGLGECFREMLDSQGKKIGFFICININPDKITKKN" gene complement(<91273..>92673) /locus_tag="TVAG_462710" mRNA complement(<91273..>92673) /locus_tag="TVAG_462710" /product="hypothetical protein" /note="transcript TVAG_462710A" CDS complement(91273..92673) /locus_tag="TVAG_462710" /note="encoded by transcript TVAG_462710A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18585.1" /translation="MNPTKEKKEDVNLYEGNDEKEFLRMSPKKYQPSSRQKLQNTIKL IDSDNDADWTKAINCLMNNPEYITSEIIPRIFQIGSSEDNEMQLLVLEFLKQFVDGED SDFGILIENNICDFLSQFLDLNDTFLYSYAIEILQKLCDASEDISKTIFESSLVENSY SSAELAIQTMESFSGDNSSDEFLEYCYIVEGTLRILQHYLPKLEKEMFTLLIALLSSP NQTQQTMSLDFIYYFSIKCSDEYLDHFIEMPAFNTVLNNHLLSTDLAKIRAGLFVIQS FISRNIEYIRHFMEVGLARLLASPPGMTKNESILFFKILIKLAEYDSSDYIDVLKSEA IIIKVNNAIAEGESFQLSKPAIIFVCTLGIRDDAIAAGLIEHIIEYYYKAIEYLTQLM QECELSLQSLILRFFVALINFIIGRDKEEATKILQALKFNEIIEGIESILENNNINDE MYETCHQIIDILQEYE" repeat_region 93209..93232 /rpt_type=tandem /rpt_unit_seq="caat" /satellite="microsatellite" gene complement(<93511..>93750) /locus_tag="TVAG_462720" mRNA complement(<93511..>93750) /locus_tag="TVAG_462720" /product="ankyrin repeat protein, putative" /note="transcript TVAG_462720A" CDS complement(93511..93750) /locus_tag="TVAG_462720" /note="encoded by transcript TVAG_462720A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY18586.1" /translation="MVAAKLLISHGANINGKDINGKTPLHRAVIYERNWIIALLLSNG ANINEKDNDGKTALQYAEERKMDLAMIKIHYPSFM" gene complement(<94207..>95325) /locus_tag="TVAG_462730" mRNA complement(<94207..>95325) /locus_tag="TVAG_462730" /product="hypothetical protein" /note="transcript TVAG_462730A" CDS complement(94207..95325) /locus_tag="TVAG_462730" /note="encoded by transcript TVAG_462730A; Probable pseudogene - evidence: frame shift Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18587.1" /translation="MSDQYSRRNKFTELRSIHKSYIDLYNALYQVKTEKEEDLNTIYK NIQTELIDSMKFPPQSIIRDILKIIPYNNRYVNAYLTLAKRISDDYHVEDVSNVEPIS NYMFYKEYGIKLDKSRDFNEINKYYLDIHTKNTIYKVIMNNDIEKFIFLTGAEGFNEH LFLESDLYPYTPYRYTLLDICCYHGAIDCFKFLRTKFNSKISDDSLRFSFLGGNPEIM SECLKYKKPYEECMKYAIISHNIGFVTFLMNEYNLKIDLKWCRLYNNLESFLVYFDQT KNINECFLNSIKFNIPPLCEYILSCGANIHTKNRHGNTALHKAVNINSKEMVEFLLSH GANINEKNKNGDTVLHFAAFNNSKEMVEFLLSPWCKYQ" gene complement(<95825..>98092) /locus_tag="TVAG_462740" mRNA complement(<95825..>98092) /locus_tag="TVAG_462740" /product="hypothetical protein" /note="transcript TVAG_462740A" CDS complement(95825..98092) /locus_tag="TVAG_462740" /note="encoded by transcript TVAG_462740A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18588.1" /translation="MINEQAKIEIGGLHDPILRMIYLNYTPVIENNDPKKSKEQLVLI SNYQLILFKPKFMRKLSMHASYTYNNLKVLELRKDQIYFEFDKDNYLITLPSPSAIFE NVCQSIINILTDDSLPKFIPVQKIKRKPNSIFSRYKFLCFLNEKKPDKKVLSFLNKTK AMQFTFEEIREEVSRDLDIFMEALENLECKRLEFPRFETPQWDKLAKLLAQNQYINQI VLNGPISASMEEVYNVLEKTKTTNVACLTFQDSEATPEFFSLITKFMKLPQITTLSLI SFLKDYGDVPAFTDIVYKNRPYEFIDTLEIKYMPRINYKMIHQCFPHLDKIEFSNCKI SLANYLDYISTWNDKGVANIKLEGNNADFPIHEALSLPPCIIDIDVSDIYWTSRNLIT FLKIIAKYRNSAKNFKVGLNKIKMDTKGWVQFNSELKNIEEPQIRHIFWKGNMISPEI IEFFNRCRLTLLTFGDNFDDDDASVLLFRDYLIRQKYLQTLVYQEQERPFNLKSELIK GIRYNRSINYLSLLNTQFTHEDIQMLGLALLENCNIGQLSINTLQEHSTKTINKFWKI VVGRGTPLKLVGYDIKKSDDPELFELSKSVKDGNPNIIPPDESLRISNDRIEEVIASF HDSDEKLKKIHGSDSDMLEFPDEKPSEFKPDDAINFDDDFDEKSKSEQKDTTSQESQD NSEGSASLTPQTSQEMLLLTYEGSQEFTLDEKESYTPKFETKMQHVPLLDVDATRKML EEKFNLKNLRRHIKK" gene complement(<100028..>101503) /locus_tag="TVAG_462750" mRNA complement(<100028..>101503) /locus_tag="TVAG_462750" /product="hypothetical protein" /note="transcript TVAG_462750A" CDS complement(100028..101503) /locus_tag="TVAG_462750" /note="encoded by transcript TVAG_462750A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18589.1" /translation="MEQVSDNDFGSDAPPPEVKPEPQPKAKKGKIRKSKEYIEYAKSR RQYINHLTLSPSSILFMLETSNIKTGVQSRGTQHQPSRFGLSTQTDPITFNTASAQFP DTEPNKQQYPSTIHFLKAAAATISALLDQAEFSSTASDKQPLTRVSKFATKGVPLSVL TTKSRTVALVEESPGNRTLYVWNARSSTVNYQLVSPSTPTCFCIHDDARIIIAGTESG SILAWDLLKKAKPGQSETVLQSVFTTNDIPSKNHQDSIAGISVFGRRGTNVVCALDGS AIASFWHIRTENDEFSLTKAETVNLAATYFPTFSLAVAPNSVDSFLVGCGCSIFNCSR FGSTTSPSSYNASAAVRSIAFSKLIPTLFAAGQDNGKLAIYDILSADPLIEFCVDIST SDLSVCWSPKRASVLFVAATQTMRLFVYDLSKDMRKPIYTHKVSNAAYSVDAAETENG VILAIGEGDSSASVLRVKSDLSTPLSDTERDSFLMQLYGSY" gene complement(<102047..>103477) /locus_tag="TVAG_462760" mRNA complement(<102047..>103477) /locus_tag="TVAG_462760" /product="ARF GAP-like zinc finger-containing protein" /note="transcript TVAG_462760A" CDS complement(102047..103477) /locus_tag="TVAG_462760" /note="encoded by transcript TVAG_462760A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ARF GAP-like zinc finger-containing protein" /protein_id="EAY18590.1" /translation="MNASESAEAQKIISMLLDLPENNLCADCHVNPSKWASTNLGIFI CIHCSGVHRSLGTHISKVRSCSLDNWSLEQAYVMANVGNKIANEYWEANLPKDFVRPV PTNKMELALFIKRKYDQKLWTKPGIPPHLSIQPKKSLPKQNKRKSSHKRAHSPSNPVI QNQPSFEPINEAEEKPNNSPNLPTRSGSQIIFTTNKDESSSDSIKGILEPPVESIIAK NVIDYIVDQILEPDVKHELNLLKNIIIEEDINIKPNEIQENNNTPDVFDVDDDFFEDH PPKFVDLPKKENKEEKHEEPRHEEVALDVDDDFFDIEVQKPKIIPNPIKKIPNPAKPV PVIEKIPKKLPRPGVIIVDINEKKKKKHHKKKSEKNPEKVEEKIVQKQEPEPTKEQDN QIDEFFEEYEAETKNQKTNKVDIDNFFQEEEKPAKPAKIPSPFKPASLQKGPGTQLPA RLQKLVKSREKVVVGERKRRKHHHSE" gene <103618..104340 /locus_tag="TVAG_462770" mRNA <103618..104340 /locus_tag="TVAG_462770" /product="hypothetical protein" /note="transcript TVAG_462770A" CDS 103618..104301 /locus_tag="TVAG_462770" /note="encoded by transcript TVAG_462770A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18591.1" /translation="MGEAWKVLKLPYRDSNVQHSVFYKKHSALELEAYNFPLTDTNDK IQNILEEAFALFGKIDTITIEGNQAIIKYQNEKSLDRALLEKFKHNDAQPPEAGIGEF GVEYFKQKYMKSRPDVADLEKSAYEQIQAIDKRDAEARANAGTKKIARHTEAETQAII RKYQETAAKMQTSDFYAFQQKNKPNLYTSLLGEEVKQPRHLKKQPKKKFEKVVKPKPE PKQLTKAIQ" gene <104452..>104691 /locus_tag="TVAG_462780" mRNA <104452..>104691 /locus_tag="TVAG_462780" /product="hypothetical protein" /note="transcript TVAG_462780A" CDS 104452..104691 /locus_tag="TVAG_462780" /note="encoded by transcript TVAG_462780A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18592.1" /translation="MGQGGSIDVTQSLPEFKEYITNKAFESMPLNVNYRHLTMTEKQY IDKTILRFMQTERRIETKILECGMTEPDILDAFYW" gene <105117..>105731 /locus_tag="TVAG_462790" mRNA <105117..>105731 /locus_tag="TVAG_462790" /product="Eukaryotic initiation factor 4E family protein" /note="transcript TVAG_462790A" CDS 105117..105731 /locus_tag="TVAG_462790" /note="encoded by transcript TVAG_462790A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Eukaryotic initiation factor 4E family protein" /protein_id="EAY18593.1" /translation="MELQLNSPWTFYYFQKPTAEQGDIPYEQCLHKIGKFETAEQFWQ IYSHMQRPHNLPNTITLNLFRNDTRPMWEDEANRKGGSFLVRLQKNQVKSSWERLVLN LIGEQFPEDVVGIAVSTRARADLFYFWHQHAADANIRLDIAQTITKLLELPIKFKIDY NPFDPDSVGLDPKMYIQYIVDANGPIEKFSPKFTKPEHTAPASN" gene <108233..>109585 /locus_tag="TVAG_462800" mRNA <108233..>109585 /locus_tag="TVAG_462800" /product="hypothetical protein" /note="transcript TVAG_462800A" CDS 108233..109585 /locus_tag="TVAG_462800" /note="encoded by transcript TVAG_462800A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18594.1" /translation="MFLLVFSGIAAQQAPSDDLMKMIKQELQLLKGDIKQLQKSVYSE FDIEEKVEAPSNDFLLYDTGFLIRMPVEDHPIQKPPIKLYEQSDSTTESSSESPNSLV DDVFVPQQVNYRSSDDKISVVLNKNSVFKSFSTSPKVLKQPNSEENWMAMDDKIDVTL NRDLPLRRPSPHRPVIEPVNVKKTRCNPQVEYCSVRRDPGTQIYLNALTDPKHITRQS FSSFRNDADADRDKAPVTDNTLSGSKSFSTQKSPPLRQLNSQRLTIGKIGTRYQDSYS ESESPPLNSPQFPTDDKIPYVLNRRPERPDVPVPKRPYSPYAKKRTSPLIGERNARPA APILAVPPPIFKPSPVRPGPIEDVTLESIKYMENTAPTPIVIQQQPKVASFGSKSKKT DLDLNMVNDLNMVNDLNMVNDLNMVNDLNMVNDLNQANDLNMVNDLNQANDLNMVNRW " gene complement(109805..110482) /locus_tag="TVAG_462810" mRNA complement(109805..110482) /locus_tag="TVAG_462810" /product="ribosomal protein S6e, putative" /note="transcript TVAG_462810A" CDS complement(109830..110480) /locus_tag="TVAG_462810" /note="encoded by transcript TVAG_462810A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ribosomal protein S6e, putative" /protein_id="EAY18595.1" /translation="MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQ FKGYLFRIGGGFDKQGFPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCII SDEISALHCVVLQKGEKEIDGLTTTVVPRRFGPKRASTLRAMFGITDSKFDASKLVLK REVKPGKFTSPKVQRLITARRVARKNRMLKERKEKREATKKKAEQYQALLKQQQKQ" repeat_region 111310..112416 /note="repeat family R524a" assembly_gap 112779..112878 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" mobile_element complement(112991..113545) /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" repeat_region 113879..115483 /note="repeat family R41b,R54a" gene <115503..>115823 /locus_tag="TVAG_462820" mRNA <115503..>115823 /locus_tag="TVAG_462820" /product="hypothetical protein" /note="transcript TVAG_462820A" CDS 115503..115823 /locus_tag="TVAG_462820" /note="encoded by transcript TVAG_462820A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18596.1" /translation="MSDNKAAKSPDSIKIQSPDNEYKKKLNRIKSKICYYKKKPQCGG ADAHKTKVIENDKERKEIIEKLETYRSILKLSEAKIKEFNRINKLIGRDEFNKDEFLN SIQI" repeat_region complement(116498..118645) /note="virus-like, repeat family R3a" repeat_region complement(119644..120435) /note="repeat family R131d" mobile_element 121734..121955 /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" mobile_element 121994..122749 /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" repeat_region 123160..124059 /note="repeat family R40c" mobile_element complement(124981..125736) /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" mobile_element complement(125775..125996) /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" gene complement(<126201..>126743) /locus_tag="TVAG_462830" mRNA complement(<126201..>126743) /locus_tag="TVAG_462830" /product="hypothetical protein" /note="transcript TVAG_462830A" CDS complement(126201..126743) /locus_tag="TVAG_462830" /note="encoded by transcript TVAG_462830A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18597.1" /translation="MDLNSYTPYEELAGVYNTYIDDMINEALSDNRNALSKEKLMKIP YSECYLNSITAAIGKQNKGKTLTILKQIIIIANTSPHSHVLIYINRSGSPSDDTFESL KHLIKIPIIYLSQEEAEDYLKNFLMYKELYNTIKKQGLEDKIIDKQRDELFETLSISN FDREFLHSLIFLDDAVKSKL" repeat_region complement(126768..128408) /note="repeat family R40b" gene <129793..>132303 /locus_tag="TVAG_462840" mRNA <129793..>132303 /locus_tag="TVAG_462840" /product="dnaK protein" /note="transcript TVAG_462840A" CDS 129793..132303 /locus_tag="TVAG_462840" /note="encoded by transcript TVAG_462840A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="dnaK protein" /protein_id="EAY18598.1" /translation="MFSFLLFSNVRSVVVGIDFGHANIKAGMGKFSGVVAVNNQQSKK LSPSYFAFYNYSDPKNSHPLNGTHWAIDDIDNCTWDYTSLAENHAKRHPNNIIQSFFP LLNESIGLSHREAMAATLRYLLFTMDSGVYTPEKTMLTLSVEPFLSRHERYALKEVAR LANTTLNFIVDSPTAVAHYYVLGRTKRLSNDIAFIDIGATGTWISIFSFSTMGKDVIM NQKAIVTNGTLGGNAMDKVVGDHLYQQFVKKFGKTTDSQKVMNRFYTAARMAKERLSI DIEYTVSMEDVIDDERFEYYITREEFNELIQPFADSLADLIKDAMEKAGISKLDTVEA IGGNSRPQLLHEVMANVTHVGQISHTLNPEEAVILGATILGSTKSSSYRLPKKIKSTT FCNTHIEVEVNGNKTDLYKPKDKAEKFMIRYYPLAKVNNTNFTIYADDDYARPLDIFS INFPENVTFPEDAEVMIKYGMDTFSLPAIEKIECDGKKLNVTHYFSDWQLNEERFNFS QSFIMKMEEIERDRHNASSTRNELEFYLFQIREKMESDDEFKEFLSEGDKVNITKGLQ EAQEFLDNLNNPFAHSQVFRDQLNKFKDTTKDVEMRIEEWKLIPENLKSLNKTIREVA KYLKEEVPKKRPWLVTHYKDTYDNLVDNYNHTKEWLEENYYNLTHWNKTVNPETKHNQ INVKRQILEFNMNGSKRQKKPTPTPKGWTPPPATPTPTPYEPPPPPPDWDRPPPPPDF DPGPRPEGYEGEWPPPPPPPPPRPEGWEGEWPPHHHHDVPPPPPPPPEHDVPPPPPPP EHDVPPPPEAEKVAENQQRTEERENLRDEVERKIGDDL" repeat_region 132106..132186 /locus_tag="TVAG_462840" /rpt_type=tandem /rpt_unit_seq="cca" /satellite="microsatellite" gene <132945..>135863 /locus_tag="TVAG_462850" mRNA <132945..>135863 /locus_tag="TVAG_462850" /product="AGC family protein kinase" /note="transcript TVAG_462850A" CDS 132945..135863 /locus_tag="TVAG_462850" /note="encoded by transcript TVAG_462850A; Probable pseudogene - evidence: frame shift Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="AGC family protein kinase" /protein_id="EAY18599.1" /translation="MENYHLIQQIGEGSFGRVYKARRKFTGRLVAIKMINKLGQSKDD LTSFKREINILKKVNHPHIMRMLDMFESDTDFNVVSELARGDLFQIIDDNQTLPEDVL KTVAAQLTSALAYLHKNKIIHRDMKPQNILITNKGALKLCDFGFARALSSTTLFLNSI KGTPLYMAPELVQEQRYDEKIDVWSLGIILYELFYGQPPFFTNSIYKLIQMIVNDPIQ WPGPISENFKGFLLKMLQKDPAQRVSCEELLQHPFIADVKLQDFDDHVYQFKSKQFEE AITESLSPSAPIPFNPPKSKLPDFQSIFVNPSVRSPEELLAAVKYLRDLHVGGDSPLA ASFSFHFKEFISKPIVLEEALMCATELLAADKDKFINPFSVGLQVFGMNEMPICAVNF FTNLLSVPYAAAAINYSDPPITDLQLNQERSEKLRDRLLSFLFAPDVDAVERTYVFLA YLTQASEILLNSLTGDFAPQFLPIATSAVIHHPSMAVKSAAFCILTKVIDKNNGLIKY IQPISPFVDSLFEIVNGEIDNVSSFCVFSSAISFIAVSINLLAQISDFQSKFSVRQSL SNMQQFVDGIFCGKEGIENRLYTLMDIGSKMPETDTEILSYVSILSSPFAHIPMKEKL LQQCIVGITSLLPIHQPALLSTIFTLPFSIVCPILPSLLGLFTSPSNATVISEYITSV LAEPENVKDLITVLTENKYLTVVSGLISEMGPQIPPQVMYAWTQVLLSFREPTETLLN TAPTLLQTLFALDSAAETSLMVAAHFSRLSDAFIPSLLEAGVMVLAERALQSEAVQIR TAALSFIGNFTRRQALEEDVVNALTPYIVTHLRDENQSAQRQAAFALGNLLTKNTSAV EFAIKDISAPIELLQSTDSRTVENAAGVLGNIVRKKASVLDQMIQAGALDLMVKALSY GDETGGKVLLQIAVFCQFKQARTYLVKNGAQKSIQPFTKAKDPRVKKYAQSILDSFEV " gene <136540..>137166 /locus_tag="TVAG_462860" mRNA <136540..>137166 /locus_tag="TVAG_462860" /product="hypothetical protein" /note="transcript TVAG_462860A" CDS 136540..137166 /locus_tag="TVAG_462860" /note="encoded by transcript TVAG_462860A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18600.1" /translation="MIEFINITHTFQAGVYDIILDGAAGGQGCDDGLNASEGGNGARF RCRIRFKKTPSINVTLGETPPHNNCTLNFHRGGYPYGGSSGEDIPDGNDASGGGGGLT YMSFENTIFVAVGAGAGGYHGTKGSDGGGQNYTVKILDNDRILEKENIIDDENNFQGV LSNPYLFQVLVVLVGMVELAEIGHINLILTVKEEEELLLICRFSIHLY" gene <137777..>140011 /locus_tag="TVAG_462870" mRNA <137777..>140011 /locus_tag="TVAG_462870" /product="hypothetical protein" /note="transcript TVAG_462870A" CDS 137777..140011 /locus_tag="TVAG_462870" /note="encoded by transcript TVAG_462870A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18601.1" /translation="MWLIGGEGMTKYGDISEGLVKLSEIWSWDMKTSKWTLYPIQNRD LHERSVAFLNGHIYILSGQDVANCIWDIDTSNPDYLKWESIPIPDIFQVPISGSKIFI CESLLLDHYLFITPGSVHDFYLSMLSTINITPKKKFNSSPLAWTAYNVMTDEFTQYKF SLTVPQTAYSTIIQDRVFIYFTDHNKKCVNYNKKLIKIKKTHLFAHETFDLVKCPKNY ILDSQPIIPEFQKFQEVINSHLEGDNNDKRDSSERGYNYFLNLQKKTVLNFNDYVFYE NLVAEKKVLVARYEKWSDALTDLPLCFVRDLFIFAYTDWIEETDREFIFIELMKFIKL LWQYKFYRLMWLELVQCFSKLSVDKVIALCSMTDESNVLADDKECALFKIVLYHTLNE NMDKIATIINLSLLSNLRDYPLIIQSLKNKEKIIINISADSLPVSTLEYDLALMRDLS IVKCKDGKILANKNLITGVDFSQYDSKIVKAALTHRTKNSIQSIKDLISIFSLLNDAD NIKYDFIYGCFRNNHSTIANFLLKDSEKLFQLLFLEKDQICNYIMEIIGEKDPKAVIS IPDFKIEIHSKCPVNFKINSLTFGGTKEQMYQIAYAFYLNLEFEKISHKIPNGKMAQA FLRLLSDNEPFLYKQDLIKVKDFVINILFAEEDGSIRSEQFAEMFVDCFRAKIHEECA KRCKDTKWIAILADNKANELDLKMINWIFNTTNHDSAPNITYEESVDLLAEQKDNSFV WVNQ" assembly_gap 142487..142586 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region complement(143267..143512) /note="virus-like, repeat family R299" gene <143620..>143994 /locus_tag="TVAG_462880" mRNA <143620..>143994 /locus_tag="TVAG_462880" /product="hypothetical protein" /note="transcript TVAG_462880A" CDS 143620..143994 /locus_tag="TVAG_462880" /note="encoded by transcript TVAG_462880A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18602.1" /translation="MTLKRLLTDFEYYLIDALTDPQNCVESSLSFKIEGTTHFVFTYV LKEYDRYHNEVNQTLIKFVDKKLVNNEYFKREDPNTAGDDEEYRQAIEKNNARLDAIE KNFNECLTNTYEYLMRWEARWK" gene complement(<144391..>144801) /locus_tag="TVAG_462890" mRNA complement(<144391..>144801) /locus_tag="TVAG_462890" /product="hypothetical protein" /note="transcript TVAG_462890A" CDS complement(144391..144801) /locus_tag="TVAG_462890" /note="encoded by transcript TVAG_462890A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18603.1" /translation="MTDSIVRKFDEIQDMWFDRFDMNDKEKRKNDNNLLTKRILKSKI GEASTFNTVHNFYTAVYIFNNLFNDERERKSMFNGRNEYDFILCAVRDVDMKLKKIFL LQDDTVEDEVNEFLNRDLNEIDEVMTECYKKFKG" gene complement(<144966..>145931) /locus_tag="TVAG_462900" mRNA complement(<144966..>145931) /locus_tag="TVAG_462900" /product="hypothetical protein" /note="transcript TVAG_462900A" CDS complement(144966..145931) /locus_tag="TVAG_462900" /note="encoded by transcript TVAG_462900A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18604.1" /translation="MISTIGTTTIQAANGGTLSTTTSPNSLVMNPTSMLVEMESFIPS SFTFETEIQKIKQELLTSNLDCSAKDETNEQYLYEMQDIIDHLPKLPEIQHQKLTIPE FDEIEVKATDSVEIKKFIRKVNYEFLGFHCNHKVMDKDCDMVYKNVSDIYKSEEFKTY DNFVSLVAKCVWEIRDKERRGKVWNEQLRPAMFEMKRAIDALVVLAGQISMYNAKMNP QCSKCKAAIRKYNYSVKEIERMRNDYADLKKEVEKPAEDKMNMLEFLNKNYPTVEDFL LSDVKKKYKETFGIVKTFDILSEEIEATKLFRISNIHRTIHVKRL" assembly_gap 146246..146345 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" mobile_element complement(146396..146860) /mobile_element_type="transposon:transposon-like, repeat family R2375" mobile_element complement(147093..148178) /mobile_element_type="transposon:transposon-like, repeat family R26b" assembly_gap 148289..148388 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <152194..>153819 /locus_tag="TVAG_462910" mRNA <152194..>153819 /locus_tag="TVAG_462910" /product="hypothetical protein" /note="transcript TVAG_462910A" CDS 152194..153819 /locus_tag="TVAG_462910" /note="encoded by transcript TVAG_462910A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18605.1" /translation="MSVITSILAPTTSDEKYIETLVKELTANNADETCGRISEVFKNN KDVPRQLFVPVIQKICAFVEQNNIEQATHVLLTFNRFEHVFFKTLDLAPLFKIISTNN NLYSTPLLPPFCGLCFKCINNNEDLFRLTSTPNIIADFVPYASNPFVISFIVKVAQID TSLRVPLVFNGLIEQILPTVATNETHLELLSLLISNVQTRKYFIDMGHIPRLLDTLFQ TNFSNLATNAFIALLYPKDLTNLFNAQDSVFNDGAFERFIEVAKNITADDESVKNVLK CINSCLFCHPLKNFDSNLLLDVAARRPSTRHYVLDVLETISMSNGRFLFQDGAVMEIE ELFNDKMFFLFISYICYECHKSSKFDILGFVPQNRQEKILKSVICIQRRLFYEQAIVE SQDASDELLRSLSCVLLLVCRKSDERRGILIQYSVSLFGKYQGEVRLPRSFLCWGAQE FCPSRIGYWMKRITPRIEMKNSEIFDLSPQKSAEEMRTLNYAANEAISENKRLKIHVK ALLDDKEESEKAFVNLEKEIVAAKVVQLKKFTE" gene complement(155670..157106) /locus_tag="TVAG_462920" mRNA complement(155670..157106) /locus_tag="TVAG_462920" /product="Phosphofructokinase family protein" /note="transcript TVAG_462920A" CDS complement(155820..156794) /locus_tag="TVAG_462920" /note="encoded by transcript TVAG_462920A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Phosphofructokinase family protein" /protein_id="EAY18606.1" /translation="MKSIGILTSGGDSAGLNAIVRSATRYGIEKGLKVYGINRGYLGL VDGKIFELNSRSVSGKLGLGGTFIGTARLPSWKEPKVRREAIRTLNRFSIDGLIVVGG NGSLAGANLLQKDGFPVIGLPGSIDDDVYGTDVCIGVDTALNIIIEAIERIRDCASSI QRAFVVEVMGRDSGALALMAAAAAGAEVCLVPEGKNPSMEEIAKTITQAYTRGKPHAI IVVAEGWKPGTKALIDYLKSIEDQTGFDVRTTVLGYTQRGGAPSYRDRYYGTIMGMAA VDALLAGESGKMVGIKDEKVNLVPFEDLVGKLKPLNEDLYKLYKQLEQ" gene complement(<158047..>160533) /locus_tag="TVAG_462930" mRNA complement(<158047..>160533) /locus_tag="TVAG_462930" /product="hypothetical protein" /note="transcript TVAG_462930A" CDS complement(158047..160533) /locus_tag="TVAG_462930" /note="encoded by transcript TVAG_462930A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18607.1" /translation="MELAIPQISCCEIPSFLRDFEELAAISLCHDDFEQNSEKFRKLL DKINPDGYWSILIEKFYKRIMKRNLSFFNFLNFNSANKTTNSSIRKDVRRSTERDFDF NDDRELSLSEKLAHFIENDDNDSFKAEFEERVPKENNESFNFLVDLTVLKENMELFRY LLMNGLKPTEKACKLAVISGNLDIISILNELEFSFTPYLTTAIKYHHNEIADWIISNS TKINISSLICLKCFNVRAYTFCIMNNIDDSFGYLLKNKLFKIADFAIEKGLKIDQYYE KCLRFDYLKGIEYFIKNHKPSNESIADLVERGKFDIIKYLMNNEEIRNEKNLKIMMTK AMQIQSIDMMKLLLEYSYDFEVNSLLFKAIDYNVSNEIIDLLIYNSYKSVLHEKENNK LMKYAIEKGNSYIVEYLYLNGVPIQTKDRKPPVIYAIEAKSGKLTEFLSIIGYQISND IEYNGMTLLDYGINSGSDEVMQFLILHGIDILQKSLRYPKPLCSIFKNFSVETINLIS DNYEDFEEIDSDGNTPLILALKTINKSKTIEINAEQTITNIVEQCHNINSKNKEGFTA LNYAFQSNNFELVNILLENGADPKICPPILVPYTKRYYGSPNYVHESLIVIAIKKGSD ILVNKILDRKCDISIKTEIENETPLMLACQYCSPEIVSRMISICSNVDECNNASLTAL SYAIKRKSLEIIKTLHDADITKYSASEYVYFDEKESDFNKFIKIYVSDQSRARFTTAI QQIVNVKQFTIKKENNIVDVIEENISKPLQSLIDASQRLIPKETLRRKKKKPSDEMAS KERPQGGPIKKVIRRKYYEDSDGDSFVDLF" gene complement(161218..161966) /locus_tag="TVAG_462940" mRNA complement(161218..161966) /locus_tag="TVAG_462940" /product="14-3-3 protein" /note="transcript TVAG_462940A" CDS complement(161245..161958) /locus_tag="TVAG_462940" /note="encoded by transcript TVAG_462940A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="14-3-3 protein" /protein_id="EAY18608.1" /translation="MSNERDVALFMAQIYDQTDRHQDMVDTMKKVIELSADLTNDERN LLSVAYKNIIGSRRNGLRMIAAILEHEDGRGNTQRVASLNAYRKVILGELEKYCNELI GLVDLSLLPAAKTAESRVFYQKLKADYYRYICESRSDDEKTEPAQKAKECYEAAMQIS NAEIAQYRPTSLGLILNYSVFLYEIIGEKQKAIDLAQKTYNTCSSNVEKNSDNSYSEA TMILQLLRDNVQLWTQDNE" gene complement(162787..163405) /locus_tag="TVAG_462950" mRNA complement(162787..163405) /locus_tag="TVAG_462950" /product="V-type ATPase, C subunit family protein" /note="transcript TVAG_462950A" CDS complement(162874..163395) /locus_tag="TVAG_462950" /note="encoded by transcript TVAG_462950A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="V-type ATPase, C subunit family protein" /protein_id="EAY18609.1" /translation="MSATYSPEQQFNDPYCPPTSVALGYVGIACALSFTSLGSAYGTF KSAIGLFKVCSEHPELFYRSMMPVIMAGIVGIYGLVAAIISSTNIHYPFSQFKSYAIF SGGLCVGLAGLASGCAIGIAGDVSCRAMSSHPELFMGAMLILIFGEVLGLYGFIISMI LSGKSVLACGARP" gene complement(<164196..>166169) /locus_tag="TVAG_462960" mRNA complement(<164196..>166169) /locus_tag="TVAG_462960" /product="ankyrin repeat protein, putative" /note="transcript TVAG_462960A" CDS complement(164196..166169) /locus_tag="TVAG_462960" /note="encoded by transcript TVAG_462960A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY18610.1" /translation="MSDQDIQPNRYDQLRNTFEYYIDSYNALYQLKTQNEEDLYEIYK MLKTELIDSKKYLPQNILKDILDIIPYNNRYSKSYLTLAKFISDDYHVHEVSNANSIS IFLFYKEYGIKLGDFYKFRNLDILTENTICRAIMDNDLKTFISFTEKEGFDKKLIINS SLYPITYPGYSLLELCCYYGSVDCFKLLRTKFKSKITETCLELSFLGGNPEIMSECLK YKTPNKECMEKAIISHNIDFVTFLMNEYNTNIDLSFCGNYNNLESFLVYFDQTNDVNN CFFNSLKFDIPSLCEYFLSLGANINSKDEFGVSPLRRTAEYNSKETAEFLISHGADIN EKDKDGQTVLHTAARYNSKETAEILISHGANINEREKEGKTILHIAALNNSKETAELL LSHGANINDKDKYGLTALHIAAMNNNIKTAEILLSHGANINDKDTNGKTALHVAANQN NKETAEILISHGADLNEKDFNEETALHAATLHQAKEVFKLLVLHGANINEKDKSGKTA LHNVARFNNNEMAEMLISHGANINQKNKYEQTVLHIAACNNSKEIAELLVSLGANINE KDKNGKTPLHRAAEYNSKEVAEVLISHGANINETDIKGKTALHYATENNSKRAAEVLI SHGANINEKDVTINENTAIYDAPNKSNQHCSFL" gene complement(<166463..>168196) /locus_tag="TVAG_462970" mRNA complement(<166463..>168196) /locus_tag="TVAG_462970" /product="hypothetical protein" /note="transcript TVAG_462970A" CDS complement(166463..168196) /locus_tag="TVAG_462970" /note="encoded by transcript TVAG_462970A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18611.1" /translation="MNSSSELINKLLTIGKKLEETNYASAEPILEQLNVQTLDEAIKI LENEKERYSTRNFHPIAAQITILLALAYRIEGDLKTWLQYILRCLHPTYRRYLNDLVQ NTFEKHISSCENITIEVKNVPTPFEFSSGFSTHSIMPNQKPTVLLLMKSALKSPLKAK NIIVNVKHSISGVTSHVLIDEFDLNGGSIKKASLEIGKFASGSLNIASISMNLGGATL IFDKFATIGCDEAVIFPFDHECEFSSNIPEFGVVNSPFPIKLLCKDIPFGAIAQHTKI EILNEKDSFNFLNSQNPQIFESSIQTPDKSTETTAEILVKQPCTLEISITASVCFGIV TSKWHKTYSIEFYNAFNSEFTIVNPEFKFSARLPREIVQLEQQAILISTFACNCPNAV TITNIVTKATNNISVIDNPSIFPVRVSSSEVLSYSSFFTPHPGSISGPLGQIEIYFHD KDYNEMKYITILPEINILEKVVDVRLDLPTEIEEKKIYTVNLIGRSMRGPLPVDFILS SSESILFDGETSKKIRLTDQMETLLTLKFMAIKTGTINFPTVSLQLINDRSTAIIWEC TPSLFVRYQHD" gene <168293..>170914 /locus_tag="TVAG_462980" mRNA <168293..>170914 /locus_tag="TVAG_462980" /product="hypothetical protein" /note="transcript TVAG_462980A" CDS 168293..170914 /locus_tag="TVAG_462980" /note="encoded by transcript TVAG_462980A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18612.1" /translation="MSEAVDSLNEAILESRRQLHDLQEALQKPDIDYSQVLEQITTTG EKIKSEADRISDFKYNESTVLPIAHQKKPPTMIEQIRAVSPKEFTPSHSTKAYELKKK YIKPGVPQNKPLPRLSAAQKQLPAVELLKRGLVSETDDLSEIMPQVAGNQPIQKSTLF NGIAYDFRGAAEASKRRREEKKQQEEIFTRQMEKVSEKPPEEKPEPPLTPTEPAVKKE TQNPRIYEQLQDEYAYQTLLVVRGKVARETPDFESFQRTNASRFKSIDNVLNAIEGYC AVFGISYAEIDGRKLSEAANLTTLTYDQVGRCLIGTKEQVEKARLKAANLIKFNWKVW KWRRDTERNKKLFRAAYTIQMAWRMNQVRRAIMIECRKRIESIDNKADELSQSIVNKY SQIESDPYVVIHVMTNFQDLTRVLDLMYSNVSIILLLSELPPGHIWEDFIEFMGCCGI PNVNQRVNYVIIRDLRSGNNTSNKLLCDMRSINQVRRLIASRNCFIIPHSDWHAERRL SVDISCPIFGCVNTNMLQGRNSMRDIFRDAEVVSSISTREMRDFGQLCDSLRDLLIDN KDITRWIIHLGFIQSEDAIAWFDTNQDFYDESKDLSELIKKNLHAKQGASKFIQMIPR LGATCEAVPSVVRSFPSVCVLITGNEIRVIGTYDRIHYQPFRFCSSFVPAISCNTVDL ITKARQVATILLKRGAIGYSTIDFLVYSEKDNPQSIIGFDVRVNTYPSSLNMCFVSLC CGFEQSSGKMKLLKGVGDVYGKKSRFAIVHSGLTHPGLSMIGTKDLKSQLFSEGLLFD LLQRVGFKLLFLANPSEGKNIAIAGAKTPENALALMEKAYTYMLKLLSPKSGGDLESS ISSALIGMRHFKTRIFP" gene <172269..>172448 /locus_tag="TVAG_462990" mRNA <172269..>172448 /locus_tag="TVAG_462990" /product="Ubiquitin, putative" /note="transcript TVAG_462990A" CDS 172269..172448 /locus_tag="TVAG_462990" /note="encoded by transcript TVAG_462990A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Ubiquitin, putative" /protein_id="EAY18613.1" /translation="MQILVKILTGKHIALKVEPTDRIEGVKAKIKDKEGIPPDQQRLI FARKQREDGNKLQDF" repeat_region 172840..172879 /rpt_type=tandem /rpt_unit_seq="a" /satellite="microsatellite" gene <174073..>174435 /locus_tag="TVAG_463000" mRNA <174073..>174435 /locus_tag="TVAG_463000" /product="hypothetical protein" /note="transcript TVAG_463000A" CDS 174073..174435 /locus_tag="TVAG_463000" /note="encoded by transcript TVAG_463000A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18614.1" /translation="MDAQNLANAQQPGQPNPENIPNEVRIQTAMANYGQVPTDVQMQT AMSNDAALGLPPWYANMRWKEFYTNPEVGYKQLYADDANTGVDPEYVFYQRRNRMYEL QLKNAMELRRKRKRLGGH" gene <174454..>174696 /locus_tag="TVAG_463010" mRNA <174454..>174696 /locus_tag="TVAG_463010" /product="hypothetical protein" /note="transcript TVAG_463010A" CDS 174454..174696 /locus_tag="TVAG_463010" /note="encoded by transcript TVAG_463010A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18615.1" /translation="MGFFSSIGNFFRNVGRGIWNGIKTVGRGIWNGVKNIGKRVGQFV GIIPKDPEPEEQAPVIQQPEPAPQSSWQPNPTPQPY" gene complement(<174699..>175547) /locus_tag="TVAG_463020" mRNA complement(<174699..>175547) /locus_tag="TVAG_463020" /product="hypothetical protein" /note="transcript TVAG_463020A" CDS complement(174699..175547) /locus_tag="TVAG_463020" /note="encoded by transcript TVAG_463020A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18616.1" /translation="MLSIEKENSRVATTKPLDELFTNVGQKFETETVKHEGYRFDYPL RWLRDPSVTKAVGFRRMKFISEAIHGFPFTVAFEIRYYNKEKHTYEKFEQGKLLQVNL LVNLETTLQAFQEKINDIYLEYANQFNIDEGEYHLDIVYDRKNATVKINRIEDLGEDV YISTKYNNLAWYRFLRMLNQPAEYPVHPNFYEVENPNGTYENVFDSDAIIVHASFSGA QNSFLCLANDFYEKPTKLYEPPSGSISDFQVWFTTDGRKRIIPLYHAFYLELSFIYNY YRTVKI" gene <175566..>176852 /locus_tag="TVAG_463030" mRNA <175566..>176852 /locus_tag="TVAG_463030" /product="hypothetical protein" /note="transcript TVAG_463030A" CDS 175566..176852 /locus_tag="TVAG_463030" /note="encoded by transcript TVAG_463030A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18617.1" /translation="MSKETASMREIQHNRQLILQALNKNTTNFSNYSKISESLKEGNL KLTLNPLTDEFLFQDSKNHTVCINPTKGTLNEKPIKELLLKADVDNKADKEYVIEKVQ EEHDRADATYATKEHTHPELADKTYVDNKMSSEVTRAENEYSKKTHTHTIANITNLQE TLNKKSDVGHTHDFFATVGIENIAGTVEEPDGTGGDVLNWKPPNFPQGLTSDEDITTM KYTRCRNVYVMEDENNVKFTAQDLYDKKADKTYVNDELDKKADKTYVNDELDKKADKT ELQTLKTEILQTLYPIGSIYTSMNSTRPEVVLGLGTWTQIVDRFLYCANSSKETGGSK TISGENLPAHSHYIDLSTSQAGWHKHRFWDWSAMKKGKGYDVKDNVQFAINCFWGSTQ GEGNHTHRVSGYTQTTGQSKDYMPPYMTVYAWYRIA" repeat_region complement(176849..177808) /note="repeat family R11b,R31b" repeat_region 177826..178227 /note="repeat family R31b" repeat_region 178247..178402 /note="repeat family R31b" repeat_region 178422..178997 /note="repeat family R31b" repeat_region 179043..181181 /note="repeat family R31b" repeat_region 181371..181634 /note="repeat family R23a" repeat_region complement(181684..182385) /note="repeat family R23a" repeat_region 181965..182016 /rpt_type=tandem /rpt_unit_seq="ttc" /satellite="microsatellite" repeat_region complement(182418..183002) /note="repeat family R23a" repeat_region 183747..184319 /note="repeat family R1569_R581_R22b" repeat_region complement(184350..184550) /note="repeat family R1569_R581_R22b" assembly_gap 185698..185797 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 186168..186191 /rpt_type=tandem /rpt_unit_seq="t" /satellite="microsatellite" gene <187718..>188398 /locus_tag="TVAG_463040" mRNA <187718..>188398 /locus_tag="TVAG_463040" /product="hypothetical protein" /note="transcript TVAG_463040A" CDS 187718..188398 /locus_tag="TVAG_463040" /note="encoded by transcript TVAG_463040A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18618.1" /translation="MSSSEQPKNVNWCISNDLKPIKVFEYPDQASKIIWGVNSNNIIQ ISSQIIELTTTHKISIQMALYLIDIFSQILVKEIKLFSELYQKISNTFSYIHEPKNKR LATLLHYKGIKFEKFEPEMKEEEIFNLYPTDSPLYYIAWDKVDDLKSKFPNLDINEKI DNIKPLNCAIKYGSELCFNYLKNLGAQYTDYSEECAVHGGNQNIFMQMIEDGKKFDNM VLQSKRTQ" repeat_region 188447..188576 /rpt_type=tandem /rpt_unit_seq="cattt" /satellite="microsatellite" gene <189893..>190735 /locus_tag="TVAG_463050" mRNA <189893..>190735 /locus_tag="TVAG_463050" /product="MGC80481 protein, putative" /note="transcript TVAG_463050A" CDS 189893..190735 /locus_tag="TVAG_463050" /note="encoded by transcript TVAG_463050A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="MGC80481 protein, putative" /protein_id="EAY18619.1" /translation="MTEQNNAKNENYNENNDNTTNAIVEDSKSNWRVSKFDEEDTTIY SAKNLMILDDEPGEPTEYLHSINRYWNRRYEFWPNFDEGIVTDTVGLFSVTPWQSAIH IAASLDQYYPNDSSIIIDACCGVGGNTTAFAACIQDSFVIGIDTSAIRIVCAKKNSKV CKVDQATDFVKGDVIKFLNTQHNSARFVFCSPPWGGPGYTVESLSDFPFDIESLSKAV SKACVNNEMRLILFLPREFDPEKAKIIAPHGTKFAMIDVFEKNKKKRLIGRCFLYGLK NHNK" repeat_region 190806..190825 /rpt_type=tandem /rpt_unit_seq="a" /satellite="microsatellite" repeat_region 191086..191913 /note="repeat family R321a" gene <192044..>192256 /locus_tag="TVAG_463060" mRNA <192044..>192256 /locus_tag="TVAG_463060" /product="hypothetical protein" /note="transcript TVAG_463060A" CDS 192044..192256 /locus_tag="TVAG_463060" /note="encoded by transcript TVAG_463060A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18620.1" /translation="MDAQNLANAQQPGQPNPENIPNEVRIQTAMANYGQVPTDVQMQT AMSNDAALGLPPWYANMRWKEFYTNP" assembly_gap 192277..192376 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 192650..193510 /note="repeat family R321a" gene <194084..>195025 /locus_tag="TVAG_463070" mRNA <194084..>195025 /locus_tag="TVAG_463070" /product="hypothetical protein" /note="transcript TVAG_463070A" CDS 194084..195025 /locus_tag="TVAG_463070" /note="encoded by transcript TVAG_463070A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18621.1" /translation="MISTIGTTTVQTTTAPNSLVMNPTSMLVEMKSFIPSSYTFETEI QKIKQELLTSNLDCSAKDETNEQYLYEMEDLIDHLPKLPEIQQQKLTIPEFDEIEVKA TDSVEIKKFIRKVNYEFLGFHCNHKVMDKDCDMVYKNISDIYKSGEFKTYDNFVSLAA KCVWQIRDKDRRGKVWNEQIKSTASDLKKTIDALVVLAGKVSEYNVKMNPQCSKCKAA MRRYNYSVKEIERMRNDYADLKKEAEKPAEDKMDMLEFLNKNYPTADDFLLSDVKKKY KETFGIVKTFDILSEEIEATKLFRVSRIHNVYHVKRL" repeat_region 195584..195614 /rpt_type=tandem /rpt_unit_seq="ttttta" /satellite="microsatellite" gene <195631..>196266 /locus_tag="TVAG_463080" mRNA <195631..>196266 /locus_tag="TVAG_463080" /product="hypothetical protein" /note="transcript TVAG_463080A" CDS 195631..196266 /locus_tag="TVAG_463080" /note="encoded by transcript TVAG_463080A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18622.1" /translation="MSTTENTTTVIVHEAINEEYEYIQFNKQLRLIRSVKDDMYQMQS ILTACFAPDTKKPQDWFRNQSTIELLNEAENSTTDFFVVAKTRVSKKPQSPKLYENRE EQRDRLFSGSPKLYENREKLPNGLRGYYVHRLLVNAVAMWASPRYAWYIYRLLDEIHR QIVKRWKTSLKQKNKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL" assembly_gap 196160..196259 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 196801..196881 /rpt_type=tandem /rpt_unit_seq="ttg" /satellite="microsatellite" repeat_region complement(196809..197606) /note="repeat family R105" repeat_region complement(197854..198129) /note="repeat family R105" repeat_region complement(198767..199477) /note="repeat family R1479" repeat_region complement(199808..203326) /note="repeat family R371" assembly_gap 199857..199956 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 201837..202017 /rpt_type=tandem /rpt_unit_seq="ttgtg" /satellite="microsatellite" gene complement(203877..>204802) /locus_tag="TVAG_463090" mRNA complement(203877..>204802) /locus_tag="TVAG_463090" /product="hypothetical protein" /note="transcript TVAG_463090A" CDS complement(203891..204802) /locus_tag="TVAG_463090" /note="encoded by transcript TVAG_463090A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18623.1" /translation="MDFKWLNDLSTEFEGVGIAPTKAEIVAMKASVSMLCEKANHDTV HFWGKVKGTERNYLIIVCYTGGLLGKRTAYASLDGVCWFGLPLVTDKLISHVTNIRGP LKGQPLLKTTVRHPRKTEAFKDLQPLVPPKPRQEEEEEEEEQKEEEPENEEEEKEEEE ELPEYEDAQIAEDQRLAVLVYLIDKRGLIFPQDALLWKSTKEVKSNPLFKGVVPDSTL FDFCRLDKDIRGESQRANGIIDTMPPLSEDLPPSGWKISQDPHTGTVRINSKVWPGLV FICKGSRWGTVYLGDGQRNTDYLFAAE" gene complement(<205097..>207028) /locus_tag="TVAG_463100" mRNA complement(<205097..>207028) /locus_tag="TVAG_463100" /product="hypothetical protein" /note="transcript TVAG_463100A" CDS complement(205097..207028) /locus_tag="TVAG_463100" /note="encoded by transcript TVAG_463100A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18624.1" /translation="MLSKDILYDIFSSLSGCKIPSQSSEQILHSIEDQYKYLEIIHKE NSVNEIVENYSFFQNCDGFFNRISSLCYNLIDSEHLSSKIIGITSLTKLFLQVPIQLA SFNGFMNKIISTLKDKSMPLHLRIIASNCLFEIQKAHPELMKIKDNELFQIANDIPTQ TFIPPILQSNNPDNPMLDSFVNQRFYALNPFEKLVFTPKIFYPENTIPNDPIQLNNFL EHKSINKSQALSILENPMSSFGLSTVIERSSQEFNFSAEELIHETDSVSTISLKSQLL PPTIDTILGSQILSNFSSHSSESTLVKSIFNLSLRFPPQDVVSFFQKFYPSSQALDAH WYNLFKHQNEATKNTLICFMAQYPSRKAFIKASIKFEPFYSVPAIYNIDKEDNDMCKL LSTPLKEGKALASIFAKEKLSNMPEVKDINEKIEPKDIEFVPDMFTIQNNEIHVYNQY SALVVLTIAAKRKLKEPIVGITVTASCPECFHADGSRTIPISDFSMPEEVAIEMIAKK AANTRMNFRVVFSTLSGETKYTIIEPINIQMFQLFSSSDADFLMACAGTQESRLFLQI KMNDLENLLRQTVFGVSLVNEGREMHCVVTTPDGQLIGLRFIQNGNGITVVMKANDIS YVASIDSFLRIIHNIVNKN" gene <207821..>209443 /locus_tag="TVAG_463110" mRNA <207821..>209443 /locus_tag="TVAG_463110" /product="hypothetical protein" /note="transcript TVAG_463110A" CDS 207821..209443 /locus_tag="TVAG_463110" /note="encoded by transcript TVAG_463110A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18625.1" /translation="MDFVFSIFLATNPIKFYENSIQPLLEIFTTDVIEKQYKYMPTKE GGVERTQYWMKTSEFCINCFNRMMECAPLLPTATRQLITALWTFESGDRIFWRKFILD TIICKFIHRFHLVTNVTLALNIQTCIHKMAAEKFDLIDKMIEKFCITPGENIISDGIS EAAEIAERSIIVAPRDLTLLFSTIQKFTTVASGPLLGPLSDAFAGLESPTIADDSQYL LIRPWKAETITDSLEILKTFGFDEFVDIVNSLDLSKLPFNNSEDLSKMVTQLTSSYTT PLQQLRIDINSRKIQNFNDAIMNALKNCKTMKDLGSSASTALYFMGDSLEKSFCQKKS LSSAFIKEKVLPALIEKYPTDFLYNDENIFTPMSSYSKLIENVKNRVQSLNLPDSNGL LLRHHFFLDLLDRIDFKFGFQLMPNTNNRSFTFAKYCQENRQCTSELGPYGMEIIAKA AKAFQEISVYQKPSKNLANAMYALRIMSRYDNEKLKFAIALSGNPQVFSFASFIGGYL KTNEVVDLVLGEGNFPLIKRFRVALVSFTNST" repeat_region 209961..209981 /rpt_type=tandem /rpt_unit_seq="taaa" /satellite="microsatellite" gene complement(<210001..>211353) /locus_tag="TVAG_463120" mRNA complement(<210001..>211353) /locus_tag="TVAG_463120" /product="dTDP-D-glucose 4,6-dehydratase, putative" /note="transcript TVAG_463120A" CDS complement(210001..211353) /locus_tag="TVAG_463120" /note="encoded by transcript TVAG_463120A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="dTDP-D-glucose 4,6-dehydratase, putative" /protein_id="EAY18626.1" /translation="MTKFTCMKQFEIENLEVPGAQIIKSPVYGDIRGNLYESFHILKV DYTTSIDEINGIYPGKNTLYGPVAHKGEELLYLIRGKLLVYLVDFNDHSKRARIEVEP GMIIRIPCMCIHAFYSLDETTIFDLVKTTSHVEESHFKPEELGLEFPGPVVQAPHIDN KPLYVDYAIMGANGMIGSAFVREIEARGQTWVQLRSRLNQQEGLENELRHIMPKVSVI IAAGVGTRPNTKWCEDHHIETIDANVTAQLAAVRICKKIGLHCTIIGTSGFYHSESET SKGFVETDEPNHGCNYYYQMRVLEEKLLKDTGLENHCLNLRALFPFDHKLTTSSLVGK LLRFKVINSIKTSVTVLPDLVPLALEMMEKKINGPINWNCRGTLSNGDILRIYKEVVD PSFTFNEQILSHEQSKANGNSAANLEPKRLIEIFGDRVPEVHDAVKHVMELIKMEKPE " gene complement(<212385..>213746) /locus_tag="TVAG_463130" mRNA complement(<212385..>213746) /locus_tag="TVAG_463130" /product="hypothetical protein" /note="transcript TVAG_463130A" CDS complement(212385..213746) /locus_tag="TVAG_463130" /note="encoded by transcript TVAG_463130A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18627.1" /translation="MSIIHWKKAFENFASFNQNNNQSISITINNHEYSSTIFFLSAIS NKLKNDLNVETIPTNYTFTCTISDENTYKILEDLFKGKLINKVLEDSIITDLFEVAVA IECPDLIDYYYENFQLSQYTLKNFDKNITYFKHFELKDEFITFVSQNINNIGIPTLIQ CCSSLGYNFAELIIKSCISQSIDCNDFVISLVENSLSYFNLILLLDESKLNEEAKIKI ISFYFNSLNKDEVKNESIIAYINSFLPSLTNPRIENEKLRKESEITKEENEKLRKESE TTKQENDVIRKESEINKIEIDKLKQEIEILKREIEKYNQDPNSYKIENDKLRKELDIA KREIADYKKDPNEYKEENEKVRKELETIRQENEKLRKAIYSSQQEIAILSKEAESKSR TIAGILRNLEDPNMDDEQKSEPVHVHKPVNCFPPKHQNGSNPFCKRPFGSNTFRGSND PFY" gene complement(<217227..>218141) /locus_tag="TVAG_463140" mRNA complement(<217227..>218141) /locus_tag="TVAG_463140" /product="hypothetical protein" /note="transcript TVAG_463140A" CDS complement(217227..218141) /locus_tag="TVAG_463140" /note="encoded by transcript TVAG_463140A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18628.1" /translation="MHSEFSSLKHPNIYEAIKKISQIQLDKYNAIKNNQKIERHIKTV ITDSYKNYILDCFQKELEKTIFSIKQYNVSDLSLAQNEISPYGSIESSSLFENIPVHD ADILKSIDLTDKDTMITKFINEKREKIMALFNETLNHPDFNSSTPIQTNFEQADTNQG SDAPIRSENSNIADSTDLEPENQNHPSTNQMSSNLEHKLDLLDHIEKQLSKMRSLLGI LPTTNAIVGPSKQVSVNSKQNSEKNKKKSSITTNQTIKNKIHPTILLNVKLLFRKGFS AIITYIFKFIERDRKANVPHLQRKRIDI" mobile_element 218402..218845 /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" mobile_element 218893..219417 /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" gene complement(<219495..>220790) /locus_tag="TVAG_463150" mRNA complement(<219495..>220790) /locus_tag="TVAG_463150" /product="hypothetical protein" /note="transcript TVAG_463150A" CDS complement(219495..220790) /locus_tag="TVAG_463150" /note="encoded by transcript TVAG_463150A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY18629.1" /translation="MGKSSIFNQKRANFIDENKIFIREQSDKYQKSTSRDEKTNIIKQ VLQYFNIKYAENESKAVRRYFSYIAVKNIPAVTGKYPDTIVRKDMLYSHDHTNIINSN NIERYYRCIDHSCQARYLVKIENSSVSEDLQKEHIHECRQFKKLQNEKNDLHKSMTLT ETYNKAMAKFSEDNGTFQQIKKFMTELAVGTDENPLIKDSLVREVYNKSRKFSVGEKI TDDEIANFCLINGEQFFIDHDFQANCETMFFGFEKAIQFAKEATDLFCDGTFKITPKH FQKGQMLTIMICEPSTNQYLPLLFIFMKNRTFESYKKAFEYIFTVKGIQFSKLIQIHC DFEKGMIEALQQIFPKVRIIGCLFHFKQALHRKLVALYTKNFNTLQNSLFKLYSITPF MSHEEFVLTMHIINQNKVDSIKDYIDYFNKVWLPHYNLI" CONTIG join(AAHC03003939.1:1..6254,gap(unk100),AAHC03000526.1:1..37354, gap(unk100),AAHC03004971.1:1..4924,gap(unk100), complement(AAHC03021777.1:1..1380),gap(unk100), AAHC03026024.1:1..1264,gap(unk100),AAHC03001343.1:1..21879, gap(unk100),AAHC03000479.1:1..39123,gap(unk100), AAHC03000842.1:1..29608,gap(unk100), complement(AAHC03006579.1:1..3659),gap(unk100), AAHC03011743.1:1..1943,gap(unk100),AAHC03000528.1:1..37309, gap(unk100),AAHC03003827.1:1..6479,gap(unk100), AAHC03006367.1:1..3783,gap(unk100),AAHC03006687.1:1..3597, gap(unk100),AAHC03001353.1:1..21778) //