LOCUS DS113197 292844 bp DNA linear CON 15-DEC-2022 DEFINITION Trichomonas vaginalis G3 strain G3; ATCC PRA-98 unplaced genomic scaffold 1047229024240, whole genome shotgun sequence. ACCESSION DS113197 AAHC03000000 VERSION DS113197.1 DBLINK BioProject: PRJNA16084 BioSample: SAMN02953626 KEYWORDS WGS. SOURCE Trichomonas vaginalis G3 ORGANISM Trichomonas vaginalis G3 Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas. REFERENCE 1 (bases 1 to 292844) AUTHORS Carlton,J.M., Hirt,R.P., Silva,J.C., Delcher,A.L., Schatz,M., Zhao,Q., Wortman,J.R., Bidwell,S.L., Alsmark,U.C., Besteiro,S., Sicheritz-Ponten,T., Noel,C.J., Dacks,J.B., Foster,P.G., Simillion,C., Van de Peer,Y., Miranda-Saavedra,D., Barton,G.J., Westrop,G.D., Muller,S., Dessi,D., Fiori,P.L., Ren,Q., Paulsen,I., Zhang,H., Bastida-Corcuera,F.D., Simoes-Barbosa,A., Brown,M.T., Hayes,R.D., Mukherjee,M., Okumura,C.Y., Schneider,R., Smith,A.J., Vanacova,S., Villalvazo,M., Haas,B.J., Pertea,M., Feldblyum,T.V., Utterback,T.R., Shu,C.L., Osoegawa,K., de Jong,P.J., Hrdy,I., Horvathova,L., Zubacova,Z., Dolezal,P., Malik,S.B., Logsdon,J.M. Jr., Henze,K., Gupta,A., Wang,C.C., Dunne,R.L., Upcroft,J.A., Upcroft,P., White,O., Salzberg,S.L., Tang,P., Chiu,C.H., Lee,Y.S., Embley,T.M., Coombs,G.H., Mottram,J.C., Tachezy,J., Fraser-Liggett,C.M. and Johnson,P.J. TITLE Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis JOURNAL Science 315 (5809), 207-212 (2007) PUBMED 17218520 REFERENCE 2 (bases 1 to 292844) AUTHORS Carlton,J., Miller,J., Delcher,A.L., Schatz,M., Schobel,S. and Fraser,C.M. TITLE Direct Submission JOURNAL Submitted (23-MAY-2005) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..292844 /organism="Trichomonas vaginalis G3" /mol_type="genomic DNA" /submitter_seqid="1047229024240" /strain="G3; ATCC PRA-98" /db_xref="ATCC:PRA-98" /db_xref="taxon:412133" /chromosome="Unknown" repeat_region complement(52..927) /note="repeat family R105" gene <964..>1416 /locus_tag="TVAG_238510" mRNA <964..>1416 /locus_tag="TVAG_238510" /product="hypothetical protein" /note="transcript TVAG_238510A" CDS 964..1416 /locus_tag="TVAG_238510" /note="encoded by transcript TVAG_238510A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20479.1" /translation="MSSDFAIYIRDKLFDSKTSVDHKILHSVNKKGEFVLKFCFWEYD KNHKTLSRAVLKFVNDRLVDRDDASWRDEVQQNFLECKEDTCTVLEDEIENRIEKLLK DKELLQKYGSEKFDITPPEKKKREKKEKKVEEEKKEPEPEPEMKKFDM" gene complement(<1433..>1852) /locus_tag="TVAG_238520" mRNA complement(<1433..>1852) /locus_tag="TVAG_238520" /product="hypothetical protein" /note="transcript TVAG_238520A" CDS complement(1433..1852) /locus_tag="TVAG_238520" /note="encoded by transcript TVAG_238520A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20480.1" /translation="MAKFISVNKYMSGLKEELDPFTYLNVYFYHFEKSSFSKVWNIEP VKFAIVTKNGAKFEDLDIEGLLAVKESFDRRFSKLEEGKAYKLVIPYEPKKADDYEYY ESKIVEVQGKLGKKILESKPVFAPKEEENIDIDPEMF" repeat_region complement(1890..3125) /note="virus-like, repeat family R105" repeat_region complement(3156..3971) /note="repeat family R105" repeat_region complement(4182..5735) /note="repeat family R1479" assembly_gap 4215..4314 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region complement(5889..9239) /note="virus-like, repeat family R1794" repeat_region 7809..7926 /rpt_type=tandem /rpt_unit_seq="ttg" /satellite="microsatellite" repeat_region 9715..10944 /note="repeat family R23a" gene <11344..>11883 /locus_tag="TVAG_238530" mRNA <11344..>11883 /locus_tag="TVAG_238530" /product="hypothetical protein" /note="transcript TVAG_238530A" CDS 11344..11883 /locus_tag="TVAG_238530" /note="encoded by transcript TVAG_238530A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20481.1" /translation="MSQTAPEQIKLPDAQGYPQVDWKLFLPVEGETKDQRKARLQHAV EEKNKVLKQREEFINNLPEEERLKYRENKLKKLEEKLRRKEEKLRRKQDKRSKQDKKD KKDKKDKKDKKDRDYDDKKDKKSHCKCGSDQEVEISIDEFVQFKKWENSFKKKRVNAM KYNAFCEWRKENGQAPQAQ" repeat_region 11618..11686 /locus_tag="TVAG_238530" /rpt_type=tandem /rpt_unit_seq="ataag" /satellite="microsatellite" assembly_gap 12853..12952 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14023..>18927) /locus_tag="TVAG_238540" mRNA complement(<14023..>18927) /locus_tag="TVAG_238540" /product="hypothetical protein" /note="transcript TVAG_238540A" CDS complement(14023..18927) /locus_tag="TVAG_238540" /note="encoded by transcript TVAG_238540A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20482.1" /translation="MHGQQSAFSTKATTNSAAGGSTRGFLSFSSQSVLEGANGPRFKE RISQNLKHLATNMTRYKGCGPIIYNLSMFIRILQMLGLYLMHSANEYWEVQNASRIVV TILTLPLHFSVYPHNEKYRIILMFLFSIYYIINTVIHIFILLRDPTEKSISNRMLFYL SFTTILISPNLAMFTACGYGYLLKCIIFFKYNDTLLITGVVFSTITLILALVTHYFGY LILRNAAILNFKIMFRPWSSDLGHLLRFEYYYFIMAFASDFLDLNKQLMILIYSILAL AAANPYFIYFTSTNALFNNYQDVKYISTVLATGFVLIILMNLKYFFTQISSTILFVTF LIIYSIFTFVFKAITTWFMNKQLMKLYSVYRQSQPVLPPTSPLIFSGNKDTHIPLSQD AYNVMQGFSSLEISTAREFQTIVAIGAASRMPAVTNFDFIRWGLNFFVDNKSLFMCAQ VCNYFHENAQTQTVLLQYLTEQSDLSLPQSIAVHILDRDHTDAISDQPIFLKLLKVKA TAAHARCRRCISTFWSAVLKHNIVSMRDGICKLRDAINEATTHFDELLRCYPYSIDAV SLYISFLLEVKSSFVECYNFINNTSSSFIEQQDELKANNKQQVVSISALMKDTTKSYN EYLTDLSSYSEQERRVKHNTNGPSRGVYALMLSAFLIIVGCFSAIIIVTLIKLKEYPG LLEIISTGSDVLIEIASLTMASRRLCLFSSGIINDTTIEGVSNDFDTMENITKYIATH AEKLPALCATFFTTSARRKKMIDALNYQMPINIFDTTYNASLARTLELMIQCISNIAS NIPSFYINGTVNKTCYKPTCQSDELKTLLNNFRPLNDLSVNFIFVFENITTDEITSLD KAFKWSMIVLPTAFVVVFGIFLLLVSICIHRESKFRMSLYLSLPENIASNIIYKQNNA ERNVIYRAGSQFASSSGPSPPKATNVIGAPTVNSSSQGQSGKEEKTKAAAIESLYQFT SMSNVNSTTGLIGFIAWMIVFMILGAIAMLSLTYYGKTVNSSFVGRTSMLCYSASRFS TLQYASLAAIESFNKNNDDLVLLNSSTIVNLTTYFTDLSEYLHDILTYGDKDIPFTYR EYPDIATLFDGNKSDEQEFEDYVGKSYSSISHRGYSDLGLEARLQLLYMVTIGIVENF KNNATDLNTTSNSWLAYNHLLLTHITEDLKSTTGIYITGATNVIEKAFLAALMISVVS IIVLLLIFVIPILKYTLDLSGYFALTTQILSGINPETFRSTIYINKWLQRSINRRNYR QFEDSFKRSVTPKLQSEIAFEIPEKIFLFDAYGKFFNINSFDISTIDDGNVDIKSILG LFFDLSKNQQLLDNVNRAFYTFQEAKDKAENFTFKALSKDGVPMQVYLKGITSADCLT YDLKEMQGFYAYVAVLIKEIIRESQDEEHYNIEKKTTLQMLEMVIPPHAARRLHAGEE SICFFSGIGCVAVAEIVGFFDMDSVLTPDAIMEVVSDVKIGVASYLRKFPRVSTLGLR NGYGIFVAGQFTEDSDGMNEACDMLNFIFLAAKFLEEGAQKKGVSLAFKVGIATGGPL YCKIVMESAPIAVTDGDIYIIAEKLSSLAKPEQIVMDKATVECASSVKMNPVSVGDVE IRDRKVQMWSIPIYPVEENPQNQD" assembly_gap 21948..22047 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<22479..>22793) /locus_tag="TVAG_238550" mRNA complement(<22479..>22793) /locus_tag="TVAG_238550" /product="hypothetical protein" /note="transcript TVAG_238550A" CDS complement(22479..22793) /locus_tag="TVAG_238550" /note="encoded by transcript TVAG_238550A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20483.1" /translation="MMEYIEDSNSIQNIDLVLIYSDKSLKVVGTQEIADKFNNDLSHY GQQSILDSLRDNSTQIKHGYMSINNTNYYSQIDFQTVQYFEGEIPCHATFARITSLEI YD" gene complement(<23163..>23702) /locus_tag="TVAG_238560" mRNA complement(<23163..>23702) /locus_tag="TVAG_238560" /product="hypothetical protein" /note="transcript TVAG_238560A" CDS complement(23163..23702) /locus_tag="TVAG_238560" /note="encoded by transcript TVAG_238560A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20484.1" /translation="MSQTAPEQIKLPDAQGYPQVDWKLFLPVEGETKDQRKARLQHAV EEKNKVLKQREEFINNLPEEERLKYRENKLKKLEEKLRRKEEKLRRKQDKRSKQDKKD KKDKKDKKDKKDRDYDDKKDKKSHCKCGSDQEVEISIDEFVQFKKWENSFKKKRVNAM KYNAFCEWRKENGQAPQAQ" repeat_region 23360..23428 /rpt_type=tandem /rpt_unit_seq="cttat" /satellite="microsatellite" gene complement(<24048..>32303) /locus_tag="TVAG_238570" mRNA complement(<24048..>32303) /locus_tag="TVAG_238570" /product="hypothetical protein" /note="transcript TVAG_238570A" CDS complement(24048..32303) /locus_tag="TVAG_238570" /note="encoded by transcript TVAG_238570A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20485.1" /translation="MKASFQTGIFRHHVPVPQRIAGFQCPGVYALINTGDYTKAAEIM KKSNIPFSQAYLFLSSYPDALSEYLRINALDKSLPDKQRVIYANSYVSLYTPILYALK KTDSYATAKANFISFLIDNQILQKFVSKSVIVDSLTQCNLLDVLQDIYLALQDWENYI KYYLEVQGTSKISVSTWRKLTSYIAKIPEMNIRQKIFKLFPRSQQKDLLRHWKELDLK RVLSVGADQAIRPIFPLLLDFVFEEPSDISLPEIVQPIFEDLLIDRYHGLNSPQYTTL YLVHLVRTENLSKLNDFFKTSTFNTGNQFFSQFWMGVKVYLLNLTIKTDKSHANRRKY FKKTIEPSKTAIKVQIEEVETQTQVKKTKSTVLQAVNLANIFSIFSKKKENKNQKDNE EEEDNDDDFMDDEEEEQCETGYLKLQIAQDTENNHIDIRYNPIEALTAPMRESPSKIS IRLKQETESEISSGEDDISELERFKEKSDVSESEAPPLYSSSDQSDVESDIDIKQEEE EIKEMETPEDIAPDSKRYHTSSSDSEHEDQNEENNEQDKPQEDNKEDEEQPQDAQQQP DSSNAINIINADKKHKVRTEEEERHHKERARLRKIAAKVSDQFEKDTYKPLLNYGIEL NSHASNTYSLSISYAVDKSLIEGSLQPLISLIEGPLAERFKFEEDKSELKECWMRIIS SVYELYTNQVRFDALVDIPGISYLVRNLSELMWNPNVDVSKNWKENINMIISDIDEVK FYNTMLKANPEQRKIFISILISLDEANIKQGKFDKQFDDLISKNDSIGNMANDFKNCT GEETLVALHEYVIKQITSGEKTREMWITSLDDLRPAQHRALYNLPSDARAQIIYLIIK QFNKVNDENKFLNLFKQTVLDFKNETRKSYEIAVQMNDKHKFILAQNLLTYRQQGNEP SKYWFNAIKQFINQVYNIVKSIVKSTSEFEINSVQETVMKLMNTPSLSKFKEQFVNDE IGYQTLSLLDETQVIELAKILDKKVEFNTYKSDMKWDESIKYRWSNAIKMLYDVNTQR VQKLLEIMPKFDVGFKKLIFENLTTNIPEFKYKFEQRLRDLLHSFGRITRLDRNIMQT FLGILRNQKRFKVKENWDDAVKEFTNLTSRQYTQIAQILLGFNNQLAIDCVRCFEEVY KDKNDESPEKSDEFRKMIIEILQKRIEPLQKIKLIDPHITAIFGELYLKNSSEKESKT VLLMTIDDFKKFVKMNIEEPFKQISSYESFVTEKTKELILSDPGRFKENFKEFVKELT TPYNYVYAIDENLLKMVVHRMQNLDPEITDPALQFKVPFRELQKRIKDEMIPKVKKFM DIPDDLVPEVVKTFNLNDFQSQFDALYQKQRSKKKDLLNPIKTLDPKFMRMFILLYLN PANPERDILKRWKSIVDGTLNYLKERLLPFISKVKKIERYAVDDLLYAFKNIKDIERT SIKSIVEQSYTNRSNRYYHIFEMHQDVIEHFSSYIKQGKRTELTWQNLCLEYPKVYEG IIKEIDVLKELDESTKETVQYFLMKDGRQMPDQCRIFINKLATDLYALVGRFEVDGVL FQGVSLDNGALNILKYYTIYDYEDKPEKLIKWKYAVSLFEKTVVEVYESVSKHLKLFD DRMIGMFNNYMTATNYTHSLFISDISKMVDEYSLFLSTGSETLKILETCVSSVAKDEE DVNKKWNIMFQMFSQKMNQNYIEKDNIFDQLQKVPVSVQHKVIFYLEDVYYSIQSVFE QYSLTVKEQVYDMDPTVMHIVTSHFNHLIEDEVNKQIQEFQASQQQQKTQNIIEEQIA NLKKKRREGDKEENNVPKPDRQVTLKENKIDYKKLSLSVWKKLFTKDDNDQTNIYHLI SSISKSVLPFSISNKQKPMPRQDIIAIFDAFNTKLSLFKERLIASGKDSTFLRDLLCL EDSVLNFLLSIMNKVTQDTKQVKIKEINDRKLVEKRQLEFENRMKEIKQQEMKQMNTN LEMENVVESTQMTQRISYDEGPQKPDPQVIRQSVEEEVFLTEQETETKVNLSDDDKIK IWEDSVKNFSDFFNTDTFNVWIQRLSNLTTSSQISRFTMPFTDVMTINLLSVCKDQRL LPKKKQNKPSENVKKRLQKSWSKEIFDFLVYQSQPVFYLSKFGRFDLTLIQRWSDIYF DCFSNFKFNMNNLKLATKQFNQTFSVIDKEQFDSLKNSIHSLGSVSFDQLNSYYDNTF DLCLATRENIINLSEIKQKELKDTENSKQKIILKEDIELLKRLLDVFNTILEISSQVE IIKSDEENEKNKGKKVTKSNTSPLLFNSVDGPRAKLLKRFAFFIHAINERGRLIEEKN SIGERQNHIIVSVRLNEFLAKLDQLMEKESTCTHNVDTSSITRKMWHLVLLHFDNYCH RKILEIESSLLQFKDAAITALCTNLVDMNARLLNDEEKFNKNMKQTLEEYQKFVQNFE YSVESITGTLPNSDPSKPKRIGLTAPECKLISKLFLQKCMDQQFVSRLYQQGFYRRFN IDHYESQKRILNLLGEDKSSLMMLLNTYRVCASSKRFTENQAFADKYYSSIFKAFGKR AEWLMTSHEEIREIDGYKQYVTIYEANDTWKDLLSRAITSKIIRLDDIMKFIPEKMEI TFLSPSIIDSIRGFQDESKQTEDKIENLKERSHQQRDIKSMFGDDQHAIDVESSELCE FCRQSLYTDKFIVFPCHHALHIHCFLENMDLFFEPVEQLNLIALQANALKREDTRAKL IDALSKSCPFCGELSVEILNKSFVVEDQEQIDKWALVPM" gene <32495..>33415 /locus_tag="TVAG_238580" mRNA <32495..>33415 /locus_tag="TVAG_238580" /product="hypothetical protein" /note="transcript TVAG_238580A" CDS 32495..33415 /locus_tag="TVAG_238580" /note="encoded by transcript TVAG_238580A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20486.1" /translation="MYVYPLKMKPGNQENTKPVEDPFNEDEDTSEWDSDDDDIPWDKY EVPKGLKTTPFLEFVKVYTEKLYEEYPGVNANDEARCTIGTWKELDKKERHKYFELAR KKNNMKPANLESTKHVEDPFNEDEDTSEWDSDDDDIPWDKYEVPKGLKTTPFLEFVKV YTEKLYEEYPGVNANDEARCTIGTWKELDKKERHKYFELARKKNNMKPANLESTKHVE DPFNEDEDTSEWDSDDDDIPWDKYEVPKGLKTTPFLEFVKVYTEKLYEEYPGVNANDE ARCTIGTWKELDKKERHKYFELARKKNGIK" gene <34349..>35668 /locus_tag="TVAG_238590" mRNA <34349..>35668 /locus_tag="TVAG_238590" /product="hypothetical protein" /note="transcript TVAG_238590A" CDS 34349..35668 /locus_tag="TVAG_238590" /note="encoded by transcript TVAG_238590A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20487.1" /translation="MFSDFFSKITNTLEAIDSQAATTAGEENDLKESSSDDVDTSKRK HDIENPKEDIEFIKEEKRIAVEQINSLQKEIQQLSVTNMNLETQIDESKEQYRLLQSQ NKVQESQISQLQSELTALKKKQSQTEKNYGKNQTNFDKMRDSLETDLSEAKTNLTSLQ VAHDQSKAEIEHLKTELQGKESEISSLETEIAQLRQLTAKQLSSNNDSSSVAQIEIYE SEVTRLKDRLTHINQQLAQKDALFHEIQSQKDKEIGEIKKQQTMSETELLKAKMRIEA LQHEAELFKSQAQAEKEELETNLNSELQKQKEIHKNEVERIRESMIKDFNKKESKADE LEAKLNQNTRMIASLKEENMAMRVALERKQDTFSVSVVRKKNKRRFTLNKALKVRKGT KLYSALRVVDLLISRFIGYFENRPIQSFVFVFYLIIIHIVLWCIFFF" gene <36932..>37576 /locus_tag="TVAG_238600" mRNA <36932..>37576 /locus_tag="TVAG_238600" /product="NOT2 / NOT3 / NOT5 family protein" /note="transcript TVAG_238600A" CDS 36932..37576 /locus_tag="TVAG_238600" /note="encoded by transcript TVAG_238600A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="NOT2 / NOT3 / NOT5 family protein" /protein_id="EAY20488.1" /translation="MMKTKSIAESQLDEEYPALSTVTARRTQSTPYINQIQQQPQQIT PEQTNPWKEFEPYNINSPESFIQADLSPQDLGYALTKTLGLIPDAPYDVAVNSKPTPT GKQQQNNGYPKMPYLKLLQPEFFKKYDNQTLFFIFFYFIKTSQQYFAGCELKRRNWRF NTKYQTWFHRIGKPLEKTDQYEIGKFEYFDNESAESWCIRVRSPFKFEYQYMDE" gene <38067..>41117 /locus_tag="TVAG_238610" mRNA <38067..>41117 /locus_tag="TVAG_238610" /product="hypothetical protein" /note="transcript TVAG_238610A" CDS 38067..41117 /locus_tag="TVAG_238610" /note="encoded by transcript TVAG_238610A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20489.1" /translation="MSRFILNNFDWVSKIQDLFESLTEQNAVIVADELMLECECDHEI KFKILAKEFIYSSIAQPQNVDSIVAVLSYIFENYAKDFEIDFQEILVSQIKTAINQAK YFGNLINIHYFLKQCLVLGIFQKSDLKEDLFDVSNITFTFPPDSIEYIIKNDNTDRLI EYLEEGLIQKDYKSQKKCFELLHVEQHNPDLLQLAALYGSLNCFNYLKSINVPSDHVN DYAIAGANKDILSYCVKLENNLYVAVITRKFESLKFIIQNFMNPIDPVYPILDKAFMY ACIEGHYRMINELYNNNARTFFVENHMNAIYGSILRSHVDIVEFLSKIPQTPMNEIVN GQTPILTAVENNEIEIVRILSSREDINYHLMLKGKTPLYIAAEKNLKEIVSILSKTKN IDLNEGDQKGDTPLAVAIRNGYHDIVEELAMIETTEINKKDANGETPLFVAISTKKNE IAMTLLSFEDIDVSVLTNFGESCFLASCLTGNFEIMEIIYQRNPQLLTVSDNNNMSPL IAASISGNEKIVKFLLEKVTDVNCCDIQNQNALYHACENGYLEIAKMMIEKGCKKNVI SLNNYNCFTIAVCRGHYDVVELLINDKDIDKSVKDWTGRNILCLAASNNQPKILSLLL EKLDIDVNEKDNSGDTSLLVASHLGYFDIMEILIKNDKTDINVKNKKGQSAFVLAARI PNTQFMELFFTNSKFVLDDEQKKLAAIECAKYGNLQNLKYLRDKGVEFNGDVFGEAIL GGNQETIEFLSNYCKDFSPHIDHFLKSIETENFELFELLSKISTSCFTRKTSNGDLLL HKCAEKGLNNFIEIILNDDKVDINTQNNNGQTAFLLACRNDQLSTVEFLSNYDNIDME IAGKGKRTPLFMAASYGNSGIVAFLIEAGVNVNTYSVYGETPLYAACSRGFASVVRSL IAIDYVDVNAVAENGNTPLFTATINNHENVVALLLTREDINPNIPDKTGETPLQNAIA NKFTNIVKMIADKLGFELPKEECHCHDECEHHHNHDYCTCVHCH" gene <42056..>42310 /locus_tag="TVAG_238620" mRNA <42056..>42310 /locus_tag="TVAG_238620" /product="hypothetical protein" /note="transcript TVAG_238620A" CDS 42056..42310 /locus_tag="TVAG_238620" /note="encoded by transcript TVAG_238620A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20490.1" /translation="MSSERPYVFIHVIPSMDGKITGNIFNTQSLLNLRGEFGRTLGFH ERDAWLCGRATFDAICTHNETVDLSSMKKVKETSILLPLL" gene <42481..>42750 /locus_tag="TVAG_238630" mRNA <42481..>42750 /locus_tag="TVAG_238630" /product="hypothetical protein" /note="transcript TVAG_238630A" CDS 42481..42750 /locus_tag="TVAG_238630" /note="encoded by transcript TVAG_238630A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20491.1" /translation="MLSKLKNTFHLKSIAVQGGGMVNWSLLRAGLVDELSYVIAPTTD GRSTDVSFIRRNPEDTDSPPLEFDLIDVQRVGDNGVWLRYAPKKN" repeat_region 42852..42882 /rpt_type=tandem /rpt_unit_seq="taaa" /satellite="microsatellite" gene complement(<42907..>45879) /locus_tag="TVAG_238640" mRNA complement(<42907..>45879) /locus_tag="TVAG_238640" /product="hypothetical protein" /note="transcript TVAG_238640A" CDS complement(42907..45879) /locus_tag="TVAG_238640" /note="encoded by transcript TVAG_238640A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20492.1" /translation="MEEPDDNQAFIHNVCKKTAQLTRVAADFQDAHFDQAMLIKNLQK HYFQLYDSVIEQTRKNAQDAFNALVKYRKAQIEDSCHEYGLQYKQIKSDFARILNEKS TQLNNISREAKLCHRNVKEMTRDSILLAKSVLSTADEVEKSLNAQARCQTPTLNIDNK QDLIEIRKKISDEKKRHQKVTNDIKELYKSQALEFKNKVRAILVKEIQKRKPYFSNVT DKLKQLQNDITILHDDYMKSLEEAKIFEKEAYNKREQVMNLTNLEVKEIGDEIKKIKV SIQTENKTSTERLANARKILKNGRASQSAIIREISKIVDRQRDDSRDLERSIAQRRKE RLEQLASQETGLMQQHKTELQMKLSEISLQRQIIDERQLTTDHLREKSRNLVDMFMND LREFSSTFDKSLQKMEFDINSLFNTEKMKYGQMNDDQYNGLNSSFTSIYEESRHHRKE VRKSSHKMKKDLTELKAKITTDGEERERTNNIKREEYENKFKEIMAERRSQKEERCKS MSNKHSQKDDQAFITFQNDLSAKRDEIQKNNKIPEMTYTLTYEETEFKHEKDTLEATL DIISRQIESMQNNKEIRMAELASDVVNADKNKRMLERQLKTARDEINQEYELTLQVDQ VQLADKIDKISLLYNADENERGREVIEAIRRVKQTENRTKEIVKRKMDEHNAKMKEIH NQMNQIKERIRKLSTGEDENVLKQKLVDMQKEQTQKLQDVEVSYNKLKQYFRQLFKQI ENDFQKQKDEIKASEEQDLAQFKEGENHYQLKHEKLRQETDEKKQEIEEKFSEKKQEI EVEHQKLIENMKRRIESAQRNFEEYNEDMNKKYTEFQKKCDEEYDNSMENLPPRMQTQ INELIDQNKDLHSKMEELNQKVSDLRYEYFTNETRVVDKNKINTLKKESETKITEIAE AFKPLFGLKMRRYTHPVFYRTVATNTDTDPIPRSAWDVGKPTPLGERPSTGAHRSKAS IVFPRSARMSADNLNMLQ" gene complement(<46583..>47065) /locus_tag="TVAG_238650" mRNA complement(<46583..>47065) /locus_tag="TVAG_238650" /product="centrin, putative" /note="transcript TVAG_238650A" CDS complement(46583..47065) /locus_tag="TVAG_238650" /note="encoded by transcript TVAG_238650A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="centrin, putative" /protein_id="EAY20493.1" /translation="MSDKKEAKGRGELSEEQRQEIREAFDLFDTDGSGSIDAKELKVA MKALGFEPTKEEIRRMISDVDTDGTGAISFAQFLQMMTKKMEERNPEDEIRKAFRLFD DGNTGRISFKNLKRVSVELGENLTDEELREMIEEADRDNDGEVSYEEFVHIMKKTSLF " gene complement(<47244..>47603) /locus_tag="TVAG_238660" mRNA complement(<47244..>47603) /locus_tag="TVAG_238660" /product="hypothetical protein" /note="transcript TVAG_238660A" CDS complement(47244..47603) /locus_tag="TVAG_238660" /note="encoded by transcript TVAG_238660A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20494.1" /translation="MEKAPNKRVSKEVKEDVNRIEQLKLKFIVIRMWFTCGETPPQSV KITIFGVLALIFAAFKVGTNCYKSIRYLDHKTPQNYALLVTTIFIVVPSLYILFISFC CWRRIAGYDWWMIPHLT" gene complement(<48731..>48952) /locus_tag="TVAG_238670" mRNA complement(<48731..>48952) /locus_tag="TVAG_238670" /product="hypothetical protein" /note="transcript TVAG_238670A" CDS complement(48731..48952) /locus_tag="TVAG_238670" /note="encoded by transcript TVAG_238670A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20495.1" /translation="MFPFEHIEKDKYGCTALHHATHNNKETDELLISYGANINGKVIQ GFTALIFTGIFFHLKMINSKVLKGALTTF" gene complement(<49061..51745) /locus_tag="TVAG_238680" mRNA complement(<49061..51745) /locus_tag="TVAG_238680" /product="Clan SB, family S8, subtilisin-like serine peptidase" /note="transcript TVAG_238680A" CDS complement(49061..51724) /locus_tag="TVAG_238680" /note="encoded by transcript TVAG_238680A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Clan SB, family S8, subtilisin-like serine peptidase" /protein_id="EAY20496.1" /translation="MRNNIALDDSSKEKISKHDASWYYVRFEEDKKYQDVLKALNLNS SQFKPIEKGFYSVFLSQKQALTLKNKFHLWIKKIPSKDKYPLIKSTKNITEFYVLHTE NCKLPGKLIEKGLKFSRISFENNEDAFKLLSKTHCVRSFEPVVSRIQFQTRFNKELLN NFQDKVWKPQMSEYETGLPYFFRRYTGKDQCVLMADSGIDTSSIWLSDPTPENNIFGF NRPHRKVKKYISYADYKDDTGHGTFLAGLMVGRTFNDDESKYYNGIAPDAKIVVADIS QGDLTKLPSNIADLSRDAQENNCTVQMNAWTQPDQPLLTYIMDEIAYDSPNTITVFPG QADEFGYLETPADAKNVLTVGAVYGNMVSKSVFEKNSVVYIYPTGLSRFIAGIVDESG PSLFNVTNTNYIKMTIDSEQKQVCVMNHPNQLNLEKCKVILYFGEEKIKRKFQVPVIR LPSRWRGPFQTDLELSIVPADTESGREDERYELLPKSAKKVKYPGRIKPEIVAPGGPM TGPKAGARIGDSTPNSLTTNQGTSVAASMISAYLLVLAEYFKDKQYNTLNTPLAKALL VASADDIGRIDVERGNNTQFSSNEPGYGFGLPRMERIVNNLGAYQKNVKAYNYKPYYQ CFSAHQNEDVEIAISWLDKPRDPYSPIQITTPLIAWVSDAEEYHQSSRNQINSIKQNI DRVNNIIKIKFKAERDRKYHLKVVPDSFESEDHVEFSYVILGDVSLEMSCTDITNGCP KQCQNGGTCQQLKCQCFGEYRGDFCQYKINSAYAGVPIKVDLPQNNWAYYSLALPKWE PGSSVVFDMQNFDEDNFDFLIRSQDIPTHSDYFCSYAKCDWGIIDRENKFLTIKYEQW DYMKTRDPIFIGVYARSARPTNCTFIPVKLT" gene 52273..53120 /locus_tag="TVAG_238690" mRNA 52273..53120 /locus_tag="TVAG_238690" /product="hypothetical protein" /note="transcript TVAG_238690A" CDS 52285..53034 /locus_tag="TVAG_238690" /note="encoded by transcript TVAG_238690A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20497.1" /translation="MFLIHQQDAQSLISNKQIGIEFHIDEKTQQIVGSFYNNSMIYEF NSLGSNAILDFVTVEITDEKFKLISTKNYIGKTIEFEYSEDGGSVDMGATIDGIKISI SFANGKTATVMYSDETYQLEKDVQPDASQISPMFYRINPKYARQPVQKANMSFIDLFK QAIEPYKRYSYIIYTATFILFIEFIFICSGFCFKRNKYPENKEEQPEEKAVSKEDDSE KEEESNDEKGEKFSDGVDDDVEDDDDGDASH" repeat_region 52989..53023 /locus_tag="TVAG_238690" /rpt_type=tandem /rpt_unit_seq="atg" /satellite="microsatellite" repeat_region 54630..54650 /rpt_type=tandem /rpt_unit_seq="a" /satellite="microsatellite" repeat_region 54851..55669 /note="repeat family R321a" gene <55809..>56171 /locus_tag="TVAG_238700" mRNA <55809..>56171 /locus_tag="TVAG_238700" /product="hypothetical protein" /note="transcript TVAG_238700A" CDS 55809..56171 /locus_tag="TVAG_238700" /note="encoded by transcript TVAG_238700A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20498.1" /translation="MDAQNLANAQQPGQPNPENIPNEVRIQTAMANYGQVPTDVQMQT AMSNDAALGLPPWYANMRWKEFYTNPEVGYKQLYADDANTGVDPEYVFYQRRNRMYEL QLKNAMELNRKRKRLGGH" gene <56190..>56432 /locus_tag="TVAG_238710" mRNA <56190..>56432 /locus_tag="TVAG_238710" /product="hypothetical protein" /note="transcript TVAG_238710A" CDS 56190..56432 /locus_tag="TVAG_238710" /note="encoded by transcript TVAG_238710A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20499.1" /translation="MGFFSKIGNFFRNVGRGIWNGIKTVGRGIWNGVKNIGKRVGQFV GIIPKDPEPEEQAPVIQQPEPAPQSSWQPNPTPQPY" gene complement(<56437..>57285) /locus_tag="TVAG_238720" mRNA complement(<56437..>57285) /locus_tag="TVAG_238720" /product="hypothetical protein" /note="transcript TVAG_238720A" CDS complement(56437..57285) /locus_tag="TVAG_238720" /note="encoded by transcript TVAG_238720A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20500.1" /translation="MLPIEKENSRVATTKPLDELFTNVGQKFETETVKHEGYRFDYPL RWLRDPSVTKAIGFRRMKFISEAIHGFPFTVGFEVRYYNKEKRMYEKFEQGKLLQVSL LVNLETTLQAFQEKINDIYIEYANQYNIDEGEYHLDIIYDRKNATVKINKIEDLGENV YISTKYNNLAWYRFMRMLNQPAAYPVHPDFYEVENPNGTYENVFDQDAIIVHASFSGA QNSFLCLANDFYEKPTKLYEPPSGSISDFQVWFTTDGRKRIIPLYHAFYLELSFIYNY YRTIKI" repeat_region 57304..58713 /note="repeat family R131d" repeat_region complement(58710..59669) /note="repeat family R11b,R31b" repeat_region 59687..60088 /note="repeat family R31b" gene <60108..>60260 /locus_tag="TVAG_238730" mRNA <60108..>60260 /locus_tag="TVAG_238730" /product="hypothetical protein" /note="transcript TVAG_238730A" CDS 60108..60260 /locus_tag="TVAG_238730" /note="encoded by transcript TVAG_238730A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20501.1" /translation="MNNTALRQISSRWICRLPAVTQRVCQVLPIPQEVLDRLKKQQQP VENKPK" repeat_region 60280..60864 /note="repeat family R31b" repeat_region 60911..61534 /note="repeat family R31b" repeat_region 61535..62125 /note="repeat family R31b" assembly_gap 61541..61640 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 62274..63134 /note="repeat family R321a" gene <63584..>64522 /locus_tag="TVAG_238740" mRNA <63584..>64522 /locus_tag="TVAG_238740" /product="hypothetical protein" /note="transcript TVAG_238740A" CDS 63584..64522 /locus_tag="TVAG_238740" /note="encoded by transcript TVAG_238740A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20502.1" /translation="MISTIGTTTIQTTAPNSLVMNPTSMLVEMKSFIPSSYTFETEIQ KIKQELLTSNLDCSAKDETNEQYLYEMQDIIDHLPKLPEIQQQKLTIPEFDEIEVKAT DSVEIKKFIRKVNYEFLGFHCNHKVMDKDCDMVYKNVSDIYKSVEFKTYDNFVTLVAK CVWQIRDKDRRGKVWNEQIKPTASDLKKTIDALVVLAGFISMYNAKMNPQCSKCKAAI RKYNYSVKEIERMRNDYADLKKEAEKPAENKMDMLEFLNKNYPTAEDFLLSDVKKKYK ETFGIVKTFDILTEEIEATKLFRISNIHRTIHVKRL" gene <65377..>65877 /locus_tag="TVAG_238750" mRNA <65377..>65877 /locus_tag="TVAG_238750" /product="hypothetical protein" /note="transcript TVAG_238750A" CDS 65377..65877 /locus_tag="TVAG_238750" /note="encoded by transcript TVAG_238750A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20503.1" /translation="MLNIEFETVRKIDNDTKVVRIGDLNVRYSKKYNKYSLSDIISPS GKKTSHDWVKIASTQKILTRNPKLMISVRFYGTTAYLIDKSLIPIVLLWLDPVVGYNF ITYGSFDTERCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLEKNFLPTGKI FSVVRP" assembly_gap 65716..65815 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<66076..>66951) /locus_tag="TVAG_238760" mRNA complement(<66076..>66951) /locus_tag="TVAG_238760" /product="hypothetical protein" /note="transcript TVAG_238760A" CDS complement(66076..66951) /locus_tag="TVAG_238760" /note="encoded by transcript TVAG_238760A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20504.1" /translation="MLEKKFADIDKKFENVLNKNKRKLENAQIKPIHEKFLFAQNGIT GLIAPPGSGKTFTYLKMAAQQQELDEKNPFYELVVICSTSGQFDQTVNSFKDIIKKSK LVCIKDTELLDWIKKYQRRVLKYNAINEYINSKFKDPNEEMQRILEKKHFRNKQKEIE YISKKLQSYDWKTYPHRCLLILDDFASHPLLKNREQDMCRILKKLRHFNISFVICVQT AKSLSKDVKRILTDIILFPGLSEDDFMELMKESMAGKFDRHELWEKYKVIQDPHTSFR IHIYANKVQIVKSQA" repeat_region complement(67008..68498) /note="repeat family R1479" assembly_gap 67253..67352 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region complement(68652..70907) /note="virus-like, repeat family R1794" repeat_region 70455..70594 /rpt_type=tandem /rpt_unit_seq="ttgtg" /satellite="microsatellite" assembly_gap 70960..71059 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <71252..>71818 /locus_tag="TVAG_238770" mRNA <71252..>71818 /locus_tag="TVAG_238770" /product="hypothetical protein" /note="transcript TVAG_238770A" CDS 71252..71818 /locus_tag="TVAG_238770" /note="encoded by transcript TVAG_238770A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20505.1" /translation="MLRTLYQVRQNLPRYMQRSFDKRIAEFQVFSYGYDEDEYVDEFG DNCTKWFECYTTTQFEFDFLEFNAATIHIIALYLSEQQQDLADGDVVTVVMETPEQFG KKKSLIAKFVPGHQLFQRTEVFCIPGTKFFVRSELKERYNVSFNYTLYNVFDPEEGFF PEAMEEEEEEEEIQNSIQEESSEFTPED" repeat_region 71899..71921 /rpt_type=tandem /rpt_unit_seq="t" /satellite="microsatellite" gene <72441..>74312 /locus_tag="TVAG_238780" mRNA <72441..>74312 /locus_tag="TVAG_238780" /product="Bap-like" /note="transcript TVAG_238780A" CDS 72441..74312 /locus_tag="TVAG_238780" /note="encoded by transcript TVAG_238780A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Bap-like" /protein_id="EAY20506.1" /translation="MAMLPLEIDSLSAEPYFYTPGTNLSIVANVYDYNANPVPYWYLT ILKNEEPIEIGGETIEDISLESTSIGKNDRKTLKYPEEKDIPTSSIEVGNYTAELTFR ESDEYDSKKFTKGRFDFFIRNRMHIEYIEGNKEFYFPGEEASLKFKFLNDEDEDTYYN VYVNDVKEVVHETNRDPFIVKIQIPENAPIGDYIINYNVSVADVIWSENKSGTIQVRA KPNISNPIRMDSYLIDDEIIILFTCNDEDDNDDFRISYKIGKTSDFHQLPDTISANVS KETILKIKVDNSLLKPGINEVFIKVSDSFHIESNIIQTDIKIVNKPVIIISRQSDFYQ VGDDIHLYIDLTDNDDEDYANISFSFGEDSSNPTFLQQITYPNNGHSFSDYLETFKIP NARAGPLNLTIFATDSFGRTSNQTIVLLIHKNPTITPHILETDLVPGKTYQVTFDISD EDLPNDEINISYKLGSNDYQYVLTYRVDVAKEFNVSIPFDYPPGETTIFVKAVDNYSL SDEKRLTVNIKHKPTITVDELEKFDYTGGNVVIFKGIYSDEDNDLGKIHLISEIGNST SEAINSGEIFSISLPIPKEQQVGSITVYLFGEDLDGLTSEKHPVTFRVRSTPPIWRM" gene <74962..>75681 /locus_tag="TVAG_238790" mRNA <74962..>75681 /locus_tag="TVAG_238790" /product="Bap-like" /note="transcript TVAG_238790A" CDS 74962..75681 /locus_tag="TVAG_238790" /note="encoded by transcript TVAG_238790A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Bap-like" /protein_id="EAY20507.1" /translation="MSIEDLDSNEIVNLKYKYEGMENYVDITPSIPIVSESKIETTQV EVHLPSKYSGVLQIELVATDSHSLESLKEFVNVTIRNVPQLYISSEVPSIAKGDSLTI SGYIADIDPDDSFTFHIDNKEYESKLNRTSENISFSIQVQISDITTGEKSLDIYVTDK YNFDSNKHSFIFFIRAKPEVVIYPIKGKHVKGRQLEFSFKIKDEDEGDSSIVNIKYEN KEITSIARKLHNEGRIPRSFS" gene <75971..>76717 /locus_tag="TVAG_238800" mRNA <75971..>76717 /locus_tag="TVAG_238800" /product="Bap-like" /note="transcript TVAG_238800A" CDS 75971..76717 /locus_tag="TVAG_238800" /note="encoded by transcript TVAG_238800A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Bap-like" /protein_id="EAY20508.1" /translation="MKSSCNEKDSVFNFSIPEFTSDGEFPIIAVLNDTYGQSSTFPVK LDVMNYPPEVEIVNKEKIEKSVFVQNETVIITYRIRDNNTDDSSKVYIAIYNNNSSKT DNNEPYIILETSKYWTEYNYSFEIPSNFSDGEYTFDIYLVDKNGKKSKISNALLKIDF SKAQDGSVNLFLIEVERKWIIIVVVSVIVMIVLLIVLIIIILLIPCGEKEKQEMEEIG EEPEDWPSASDSGETVSIDSDEIVEYNAQP" gene <77208..>79406 /locus_tag="TVAG_238810" mRNA <77208..>79406 /locus_tag="TVAG_238810" /product="hypothetical protein" /note="transcript TVAG_238810A" CDS 77208..79406 /locus_tag="TVAG_238810" /note="encoded by transcript TVAG_238810A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20509.1" /translation="MESGFSKEALEEAYKLAELQRLLSSMNEENFNSTVENIMKLPYI KTIDGVYFFVHELMDVFEIRSTNQRLHARLFGELNKNAAPDNALEHLKPIILKAAFRP YGKALLHRKEEALCFIRNCLMAKVLTINEIAEKICNILSDCIFETAENSLLYFFFGAE LEAFDPPLFTLLSQKTNRHNNPLEEFIDTLDLLCADGWEKMHDFTDVGCTKDSPFYAI HRDDPSLWGPDLNINQKFPNLFFQPRFIYERTPNLIQLACFYGAINCVKELIKRGASL KNTEKYAVAGANPEVLQILKDKGLSLLRSIKIAARFRRYELFEQIYKQTPFGVADQEY EALSNDEALTIDGIFNKCARTNNVVSMLFVLKNGATPTKWNASGMIMIAADEGHVGVL KLLASIPGIEAPGISKGTTALFQAAENGHLGSLKVIMGMKGADCSFRKGSRTILHAAA LNGHQDVVQYIIDNNCVDINSVDASKRTPLYFAIDGCYINVIRAFLNSPNCDTNHKDV DGLTALHSACKSAPSSIVRFLVLSGKFDINAKDKQGNTPFHYAASRETMAIAESLSQN SNQIDYNSKNKQGNTPLHLAAQTLSRAITFVVSCPGIDYNAVNKDGMTPLHLACKRNR PESVQSLVQQQGIELNKHDAQNKTALAIASKMGFIDVVKILVKTPGIDPNDGNPLYEA AVGQWPDVVIALTSCKGIDVEQKGPDGNTALEVVNSNEAKIAIREVMNRK" assembly_gap 79728..79827 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<82592..>84649) /locus_tag="TVAG_238820" mRNA complement(<82592..>84649) /locus_tag="TVAG_238820" /product="hypothetical protein" /note="transcript TVAG_238820A" CDS complement(82592..84649) /locus_tag="TVAG_238820" /note="encoded by transcript TVAG_238820A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20510.1" /translation="MEISLSYYPILHTSPINRNGLCVFKLAGHVTQKFAFIGSDGVLK YYRFDKNILSQRYESNILSNSNECVIASDDNVIVSQMKGISRYNRKGAHVKTYKIPFD NHITSMIEQGSYIHVASGTMSYTVGVQESAIAYDSPIIGFAVVNNVPYAGIASGNVYS FVPGQSQLVQTLPGSLTMISSVHHTKTDSYLAVGCSDKKLRFYNKLDKEVSSVELQSP ATAMSEFDIDKDGYPELFVAMENGNVCLISLALIESPRVLSSISIGFSATNIEAGYIY SANLVSAVVTSQSGHIGIVSAEPRRDRSLLTSIAPKVTEQELDQLRREISALENISKN SSYQRSIVPVQTKMELRGDIYSQSFVMIVESEKPISRVSIGANLPITVKSRNDCQTTI FTAKRKAPNSSAVIVPVDPNATRITFDISYETGQGGELQAFVNYAGSATVFSKEYQLR PFGLLKKLPTNPLETIKDDSLAVVDLVAADGASSVFHSIVANCFPIPLEEDVTASFSM GVVGAPLSVTLNGDKLTARSLFLPLVIQIRSYILGAMNSQKQSVTFETHLGPNCVNEF FNYIEKRFFEVNKAASDHMKLTALKEVRNSTMASTSIQANEETARLMAESQEIEKKYE ECSAEYFSYIDVIHQFYIEMWKIENINSANCIEELDAVTKEAIDGNSLTSLINFMKAS PPK" gene 85996..87759 /locus_tag="TVAG_238830" mRNA 85996..87759 /locus_tag="TVAG_238830" /product="malate dehydrogenase:SUBUNIT=B" /note="transcript TVAG_238830A" CDS 86013..87716 /locus_tag="TVAG_238830" /note="encoded by transcript TVAG_238830A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="malate dehydrogenase:SUBUNIT=B" /protein_id="EAY20511.1" /translation="MLTSSVNFPARELSRNVRPTLKTGMTLLQDGDLSKGSAFTKEER DRLNLRGLLPYKVFTKDEQAARIRRQFELMPTPLLKYIFLANEREKNSQSFWRFLFTH PPEETMPVLYTPTVGEACQKWATHRQSYRGIYITPEDSGKIKDILRNYPRQDIRCIVV TDAGRILGLGDLGASGLGIPVGKLMLYTLIGQVDPDQTLPVQLDMGTDRKEILADPLY HGWRHPRVRGAEHLKFVEEFVAAVKEVFGETCLVQFEDFEMEAAFKLLDHFRWRCNCF NDDIEGTAAVAAATLASATHMEGVPDLKNQKIIFIGAGSAATGIANLIVDMAVSRGGI TKEQAYKNIIMFDHKGMVHSGRTDLYDFNIPYMHDMEHYGSVLEAVKKFKATCVIGVS GVPGLITKEIVQATLENAEHPVIMPLSNPTPKAEATPHDVYLWSNGKALCATGSPFPA EQVNGRKIITAQANNSWIFPAVGYALVTTQARHCPPKVFEIAAESLASLVKKEDHDQG NLLPPLNKIREYSFGIAYDVSKYLIDNVLATAVPPKGTSLKDWLKAQLFEPSAEYDPL Y" gene complement(<88090..>88848) /locus_tag="TVAG_238840" mRNA complement(<88090..>88848) /locus_tag="TVAG_238840" /product="hypothetical protein" /note="transcript TVAG_238840A" CDS complement(88090..88848) /locus_tag="TVAG_238840" /note="encoded by transcript TVAG_238840A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20512.1" /translation="MYITLLLSIKGWCVYKTKLTFKDVFSALIFVLIYTICNCLLALT TLGKAETIIRLVSMFAIMLYVRELVISITKTNIHFIAHLYVISNAGVTPTSTPIYAKY RVYKLLRLAVAFCCFNISVRLITSLFNNPFLWIDQLIFDLMQIAIDIILCVTFKLSKS ESNDQYLMLSDDEYEHTKPEELQLTDIKQISIKELINKTGIAWERGIKLPNAPIIKDT AQRYDTSRLQAAKIIKPIDETDDFTESTESLSNL" gene complement(<91857..>92039) /locus_tag="TVAG_238850" mRNA complement(<91857..>92039) /locus_tag="TVAG_238850" /product="hypothetical protein" /note="transcript TVAG_238850A" CDS complement(91857..92039) /locus_tag="TVAG_238850" /note="encoded by transcript TVAG_238850A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20513.1" /translation="MDSPDRNIEDLDNDGKDNEAHIYHEGVRDSKQSIDPKANVKIPQ EVLIPFYDVNATSQTK" gene <92477..>93778 /locus_tag="TVAG_238860" mRNA <92477..>93778 /locus_tag="TVAG_238860" /product="CMGC family protein kinase" /note="transcript TVAG_238860A" CDS 92477..93778 /locus_tag="TVAG_238860" /note="encoded by transcript TVAG_238860A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="CMGC family protein kinase" /protein_id="EAY20514.1" /translation="MKVIHPTPKHNLLIKVPNGKRNSERNLASIKLSPKLEPKVPESA RFRYVKTPLDIGNNNSLKKTFEGPCSNHEVLASYRHFITDREEYEIVNYSIIYYIRKS PITCKKSDCTSNNLLRFEKDDHIAYRFQMISILGEGSSGFVIKCHDHKLNEDVAIKAL RDTRKTHDHVLLEKAYLTTLQQNGGPDKFHIIRYKDSFIFRGYFCIVMELASINIYSL ICSQPFKRLQASTYQMVARQTAEALDFMHKNNVIHSDIKPENILFTNVRRTSIKLIDF GCSCTEGNTLYTYIQSRFYRAPEVVLENEYDSKIDIWSYGCLLCEMFTGKPLFEAFDE EELMCLMISMLGIPPKSILKTAKRAKYYFDENFELLDTMEINETSLKEKTNISDPYLL QLISGCLRWDPKERFSAEDIIKHNYFKQSNNSSQSSTYMRT" gene complement(<94138..>95217) /locus_tag="TVAG_238870" mRNA complement(<94138..>95217) /locus_tag="TVAG_238870" /product="dentin sialophosphoprotein precursor, putative" /note="transcript TVAG_238870A" CDS complement(94138..95217) /locus_tag="TVAG_238870" /note="encoded by transcript TVAG_238870A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="dentin sialophosphoprotein precursor, putative" /protein_id="EAY20515.1" /translation="MSKSISQAPNSKNALLKELIRTSPKKYTAILLSDSEDEGEKKAI LISDSELDDDEDEYANTKAHKQDKYNNKNDHCRFDNKPRNQIARGIDFSSDEDDDFDD DDDTYTSFAESDYSNQTGDYSAYSNSTYQSKTYSSYSGSAVSSQYSHCSDYSEKKVCP RCSKVLSSDSYLSSEDESEDESESLSSDSELNSDSFDDSSDSFELPVPKFNKTFDPRK ELAKQRREAGNRAILEKRAKCENIPTPQVIVSPKKPSPMRLRKLSNLSKVDEIIQKRK EKLIKEKEAERKRMEEEAMKKAQEEMEQRRKESVKNLLESLGERKAHPQRYVALYRRH RKYIDSDSESEALSSSDNYSDDSEF" repeat_region 95866..96864 /note="repeat family R371,R1794" repeat_region 96259..96312 /rpt_type=tandem /rpt_unit_seq="caccat" /satellite="microsatellite" gene complement(<97791..>98228) /locus_tag="TVAG_238880" mRNA complement(<97791..>98228) /locus_tag="TVAG_238880" /product="Myb-like DNA-binding domain containing protein" /note="transcript TVAG_238880A" CDS complement(97791..98228) /locus_tag="TVAG_238880" /note="encoded by transcript TVAG_238880A" /codon_start=1 /product="Myb-like DNA-binding domain containing protein" /protein_id="EAY20516.1" /translation="MKSEKMLQRKVKRFTPEDDSLIRKYCNKYTIKNAVKKLSSILER SERSIRERFTKFLALNCEPFTKEEDQTILEMQAQFGNKWKLIASYLQSRSDIQTRIRY KQLKKEIDFPENSIPNDNPDDFNEIFGIEEIPEFDFNDFCPDF" gene complement(<99882..>104372) /locus_tag="TVAG_238890" mRNA complement(<99882..>104372) /locus_tag="TVAG_238890" /product="hypothetical protein" /note="transcript TVAG_238890A" CDS complement(99882..104372) /locus_tag="TVAG_238890" /note="encoded by transcript TVAG_238890A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20517.1" /translation="MIFKVFNIWVWTVLNLITFGSTSIYFIAPLLKKKINIPWLFDST VTVNPNVMFSKVWPFLILFILTAIQRYYYRPPPQIVIKFSRTIGVFLSLCFSCVYIDN SIFTVLYQLLIVANLFLYHWNYILIVINTIISASQIVVIATFGYPEIKSIVTHKAFFF KFFGISEHPDITRHQMIPIIILILYIFFGSIARKYDVDENHELMTFLIENLWAIVLKF SFYFFWSAIFLVVIVSKGVSIVGAVMLIVLGIIKVTGHSAKKSGVFLYVIFMLDVLFV TTVASVNVPSKVTKIVNLIGPLCDTPLAKLANVLVCLCAFLNMSHFDAKQINPIITYV GNCLASILISGVEFTLVIMAIQENNILNLFGIIVVFIILVHPKVSLLEARIITIILNL VLGYVLAFIIIKFKGKNEWYDYFLLTNVKMIEIFYIFLTMIVFSLFCEFGRVDAAVGR SFLTTYFPTIVSVATTVISFYAHTYLTFIHTCLLLINQGFNYYNSRFHPKSFNVVIWY AYIILLVKALRPLRFIPQTETTFDKAFGTIKVDNLNWCVCFWLEFLLRSCLNSPMYRM IHEKELKRAEFRRNRTKIIEEMIEIDQKFADLYFKHTLKILEEGVVNLNITEDIQNTH SVEDIKQTIIDKEPSLPKYKLITNDGNPDAPPISPVKLLYHSIIGWVLRLLRWFFLWL VDSLIELGSNFTDINLEPGVHTDFLLKVRDMMTEMVDKFSNSNVLAIPQNYVDFSKQL PLSYLNHFQIFHSLDLLSITEKTRFPLLYHYLKVCSRQAIPALLLALCFYYPLVERSV FALILFFLALFCVSFNIESYIPFVITSGFYMFLRCILRSYGMKPLVQTFINSLEETHR KLKVSVCFGLNLSVGEKIYLLIVLCLSCASQTYSFTHPFQIRRPKQHPIEEPQTNQMP KLGLSEKLLSRINMKSFIKYAFNKIALLIDVIAFVIALFFYMSWTRSSDANSFIHGSS SVTYDFVFFLMGNFIFILLNQWVILSKHKLWLFIYNFLYSVFTFIYMTYLIPVFTDNG CFEHASYWTFYFLRILSVIVYSCNLMFGFARMPPSLGNPNPLFTYIKLLTISKVPFLF EFIQLTKWLACTTSLNMFDFMIIGQLRSKLCKQVALLKLFPANSRKKSHVLGILFMIA MFCLLFAPFIVMMSSSTTSITNNVQVASVSLGIYGLPELFTGTVLPNEDSFITNSMQK KIMAMNDQKLDPFFANSKRESQYFNYPGITMTNWIISESSARFAMYTIKNTTNPIFIP YVTFKFTVQTPTTKKNIDQITITKNGKQLSEKDLETLYKALECTVTSTSPQENLTFYL DSLVPVFFIIPLSADATAVSGYTFNVTFSFQQSYSGNYYWSINAMRNENLPDDIKEGP ISSIVFSKPTYDETIGSILSKTGGGFYGMLLFVIMTCGKFIRSFINSFFSDLWIDKMG KPQIFLNVILAIEAHRKEGDLTSEYATAMMLLNTIRSVHNLVRIGGTVPINEGERVNY LL" assembly_gap 104573..104672 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <107322..>107837 /locus_tag="TVAG_238900" mRNA <107322..>107837 /locus_tag="TVAG_238900" /product="hypothetical protein" /note="transcript TVAG_238900A" CDS 107322..107837 /locus_tag="TVAG_238900" /note="encoded by transcript TVAG_238900A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20518.1" /translation="MIPGEGKVFPHPTEPYALVTGMNLQLIDLRCPGRVASIPMQGGI GALSWMPNDKSGIIIGYQNGSIDLFSLADQKAIVTQQISYCPISAVEFCRSKPGTALI ASDTDIVFANLRSWGYGRLTVTRTHQGHIGYIQDAHWYDGDELKVISCDNRRIINVFQ MPDSYLPVYQE" gene complement(108401..>109709) /locus_tag="TVAG_238910" mRNA complement(108401..>109709) /locus_tag="TVAG_238910" /product="Transmembrane amino acid transporter protein" /note="transcript TVAG_238910A" CDS complement(108423..109709) /locus_tag="TVAG_238910" /note="encoded by transcript TVAG_238910A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Transmembrane amino acid transporter protein" /protein_id="EAY20519.1" /translation="MSIKEEDVSLFTATEQTTTDAKPAQYTGVLATSINLLNSTLGAS ILTIANSFTFCGLIPSISILAVSACVSYVSASAIVKFHTITDIDSFAKISQVGLGKLG QYVTDISIMLYCYSCMTGYVVMGAEIIQSWFAIFHVNLYNARWKRYVTVLCYHFFVLF MLTLPRNMNFLSSTSIFCFIGLMLYFSGMIYKGVTILPKEGINPSVETGTFDLRIFNT LSINVLCYSLSGIVIPVIRVMAPSLHLRNVACAISYFFSFHIVFIPAVIGYLLFGAGT PTLILNAFDDHDHLFIIVRIACFVIMITSYPMMGLSLKRMYSHYFYGTDDQHLLPLKK RIICLACENLPPLLIGLFLPNARPALAIGGAIGGGMTNLFLPPLLYIKIMNKNRKQFV YWLMIIFAIIGLFLVGIATFEAVVDAIHFFKKAHSS" gene complement(<110491..>111816) /locus_tag="TVAG_238920" mRNA complement(<110491..>111816) /locus_tag="TVAG_238920" /product="Low temperature viability protein" /note="transcript TVAG_238920A" CDS complement(110491..111816) /locus_tag="TVAG_238920" /note="encoded by transcript TVAG_238920A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Low temperature viability protein" /protein_id="EAY20520.1" /translation="MTSKLNKRKVVTFQLVHRSVEDPLNADPNAPEQVLVPIHIGEDV DPELVEQLQKQMTPEARKQQQKKPKTERKGIGARYNKFFGEDLPDDGEDYSQYFKAID EENDDGVFVAPDGSVHDLRKREVEDVDILVDKLGITNDMFGTKEDPNLPKLVNDTDNP LAAGIDPELLMALDDDDAPPFEDDFVSKLLDAELNEEEDEEDDGETFTDRTADGREIK KTISRVSATASHMSHISHRSHAMDLQEKRVDYFVKTLFEEEEDAFALEEDNLEPAQVD WADIAADMQTFEGQIKLNPVKPSPETCREVTPSTEQAGEEEEEMEEEEERRDLYKLDI RSVAENASTTNNLPAQIRDGNRKKKSNKKKQEEEEEVEAPLPPEFAPKPGETKEEAKA RKKAIKEYQRQKRMLKKERKVKFSKATNKVRKSIAANGATRGTRVYNLD" gene <112383..>113030 /locus_tag="TVAG_238930" mRNA <112383..>113030 /locus_tag="TVAG_238930" /product="surface antigen BspA-like" /note="transcript TVAG_238930A" CDS 112383..113030 /locus_tag="TVAG_238930" /note="encoded by transcript TVAG_238930A; Probable pseudogene - evidence: point mutation" /codon_start=1 /product="surface antigen BspA-like" /protein_id="EAY20521.1" /translation="MRFLLFLLYKEIDPSCNSEDGKTLIKVNDTSQYLKISAKCEIIQ SYCFSKLKSLSSFTFEDNPNLTTIGYSSFKECSNLTIVNLSICSKLTTIDNYAFYQCE KVTEILFPNGLSEIGICTFYNNYLVKFITIPATVKTMNSVVFDGLRRLENITFMIGLD SMVFSSCKIPSSFQIPENVSRVHGQAFDGCEITNISVHPLNQYLYVENNIIYSAN" assembly_gap 115786..115885 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<120227..>120442) /locus_tag="TVAG_238940" mRNA complement(<120227..>120442) /locus_tag="TVAG_238940" /product="hypothetical protein" /note="transcript TVAG_238940A" CDS complement(120227..120442) /locus_tag="TVAG_238940" /note="encoded by transcript TVAG_238940A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20522.1" /translation="MAAGIFKKLWDKVKRGAHKVWETMKKGANWIFKNKEAISDIAES ITPKAAPIREILNKGEKVYQRLQPILR" repeat_region 120512..121573 /note="repeat family R40b" assembly_gap 121422..121521 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <121606..>122277 /locus_tag="TVAG_238950" mRNA <121606..>122277 /locus_tag="TVAG_238950" /product="hypothetical protein" /note="transcript TVAG_238950A" CDS 121606..122277 /locus_tag="TVAG_238950" /note="encoded by transcript TVAG_238950A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20523.1" /translation="MRRRFTSQKNTNAKAEITVGYNVNDDKSRIIQNVKVNVSPELTR SATQPNLLTRDLPKNEENEENHENGDPIILSEPGKEPVEIPTYPTYPPPLSSNIENPY KIDINSELMKIYRDIIINNYDSIINLIDQSGLIILPYESLIHIIAILCDVQDSDVKIQ FFIDDEVSCCGTVAKINPIKDISTIKISKNGTTTELHLTYNDIYNKIVDEYKISLEKF FVKAI" repeat_region 123509..124564 /note="repeat family R131d" repeat_region 124963..125625 /note="virus-like, repeat family R9a" repeat_region 126370..128685 /note="virus-like, repeat family R3a" gene complement(<129172..>129492) /locus_tag="TVAG_238960" mRNA complement(<129172..>129492) /locus_tag="TVAG_238960" /product="hypothetical protein" /note="transcript TVAG_238960A" CDS complement(129172..129492) /locus_tag="TVAG_238960" /note="encoded by transcript TVAG_238960A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20524.1" /translation="MSDNKAVKSPDLIKIQSPDDEYKKKLNRIKSKICYYKKKPQCGG VDAHKTKVIENDEERKEIIEKLETYRSILKLGEAKIKEFNRINKLIGRDEFNKDEFLN SIQI" assembly_gap 129906..130005 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region complement(130846..131730) /note="repeat family R54a" gene complement(<132189..>135485) /locus_tag="TVAG_238970" mRNA complement(<132189..>135485) /locus_tag="TVAG_238970" /product="WD repeat protein, putative" /note="transcript TVAG_238970A" CDS complement(132189..135485) /locus_tag="TVAG_238970" /note="encoded by transcript TVAG_238970A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="WD repeat protein, putative" /protein_id="EAY20525.1" /translation="MKSSNENPMLRMSWNRSNGLIAGGYSDGMISLFNVTPSREQPGS IQVETSEVISVHNKKITALSWSDNGKYFSSGDSSGKIAFFAKKEKGWKNIVNNSSVNS SVNNISWSKKNNILAIAYQDGTCACVGNEGNLHWSNMMRQVLEFLEWSPNSKVLLGGT IYGEILIIDSKGVEINTVPLPCLSNSKTEPKLVALEWHKRAEYGLLIAFRDGQIQLMR NESDSQPFVITMELEISTATWFKNGQNFVAAGIKPNGRAVAIFFNAHGDNIRELELQG KEIHAISLDPTDTSLAIASDHHFCLAQIVPSIIWAYSNNVLCYCYSKNNDNMYHAIFF NRKSGERRIQQFKDVLTLSAHSGFFTFATKTGAEDATITVTNTIGVALTSAQIPFIPF QSSSHGQTTALVSQNKICVWRFQEDEQPQIIDFHDPITAAHLTAKCLYISAGAQIVVL DMPSLAEITRYTINFSCEMIGANANGSLLSLNDSYGTVQFFSTEEKRIVGPVCKEVWA SAWSNDNPDQFAALERQKLVVFNDLDSEEPVSCLSHIAEFTDLEILTVDLLWLLKDPQ NPSPRYFRVHQTKQLRQLQQMLSARPETSVEDIFAFCKKENKTKLWDSFAETVMLEMN FSLTERCYLETTNYKGLQFVKRIRTVKDPNIQRAQVLSYLGRFDEAESIYLSMDRLDL AVEMRRSIGDFHHVLKIMGNGVGDDETIAAAYTARGDELCEQGHWSEAAMAYSQARND EKLMKARFLAQDYDGLERQMMALPAQSPLLHKIGEMFVAIGAVDDAVTAFTSCGDIAA AIDACAKMNHWKPALKLASRGRNEEIKARMVKYAEDLIANGQRASAVDFYVRAGLNVE AAKLLLKAGDEILAVGDDFISAKMCYIFAGIQLEQQRKGAFDGSATAEERLDGLMRED EVTTSGLHREVWRKAEGVHFLLLANRFFQERKYKDALVAACRVFDDYSDIVGEARAAS LLALCGLKKRFFGQCSRAMTTLEHSDELPQAQREKFEDLAIDIFTRNQPVDQESLGIV QCPKCSGVVSNLQSQCPECGERMKVCTYTARLIDGQNYWECKYCKHYVMIDAVDELRY CPLCHHKITQ" gene <136007..>138112 /locus_tag="TVAG_238980" mRNA <136007..>138112 /locus_tag="TVAG_238980" /product="hypothetical protein" /note="transcript TVAG_238980A" CDS 136007..138112 /locus_tag="TVAG_238980" /note="encoded by transcript TVAG_238980A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20526.1" /translation="MNNALEYELKRAEEQAFNSVARKLKGQSDLEILPQTKQKTISKH TDKLSKLKARVQQIVGNVDDGIHDLDDISATLKKLRKDIAEISSQCQDVTANMPRYQE TKDLAKILGRLYKVSELQRRFAEAEAQMEDVEEFCRTHEGDFSIQCFKIVIQLLDFEE ELLENLKNETQKSFICEKFEPIQEKMMTLLVNAQRVVTSAFRITTDEEQKITTDRLAR AVWIVIAGSIRLKQPITVKDLLTDSIADQFKNANTALSVAQLDSLLKKLQEVLENITD TLDIIIPALPLPQESVQGIQIMDILGQLANAEVLKVIDKVVMNSTSSTFLLSRIIIWM RDYIGSMGHMLGVEPSDEMKKRLITYETRLESQIPEDLHQFLTNIINMEEDAIDTNRD GTLSTQAPYDFMKRLIDADKVAIETNLPGSLPNIRSGLLMTFISDTQALGEYVVSCNN RKYVMAAINNSLSGIRTSGDLGKDLPDVVDQAAVMTLKNKWATMQKNAFAHLNDLIIN DFAIPDEYDIRINFPSKLEAAQQACDEAKKALLAPLYRKFISQFLHQFIAYYIISYKQ PTSLSLDEFTSNLDNDILSLSDWLLQYESNQWSKNLKSVLDSLKRILTESDGLMKLDY GAIVEVYKDFTPQLMEQLVKKSPKSTSISSEVMKGITSKYESVKAEADNGEKYIASVI DRFPDKSLFKNLKNLANKD" assembly_gap 138573..138672 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <138861..>139790 /locus_tag="TVAG_238990" mRNA <138861..>139790 /locus_tag="TVAG_238990" /product="hypothetical protein" /note="transcript TVAG_238990A" CDS 138861..139790 /locus_tag="TVAG_238990" /note="encoded by transcript TVAG_238990A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20527.1" /translation="MQIQDHELTYIELLKYGVQQEIQAGCSYSYKTRKERNQIQFNCK WPNCPCRFLVDTLPDDKYHIRKCINTHNHSAPFPNKSQQITSYFYRSYLTRYFESNQD RVYAQLRCFKDLNIPFDSGIIPEMFQQSTDALKKFSKRLHAINTRFSADDVTSLAIFV DMVKSHSPDDLIEFIHEPDRMIFYYAPFEANAFSHQIQTYHIDSTYKLLRSRISFYAV TGKFAESIVFPFLYFFVWPDTSENIQVCLTAYLAPSIANHLXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXGFEAPVLPRKAKSSTR" assembly_gap 139638..139737 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<142336..>143922) /locus_tag="TVAG_239000" mRNA complement(<142336..>143922) /locus_tag="TVAG_239000" /product="ankyrin repeat protein, putative" /note="transcript TVAG_239000A" CDS complement(142336..143922) /locus_tag="TVAG_239000" /note="encoded by transcript TVAG_239000A; Probable pseudogene - evidence: frame shift Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY20528.1" /translation="MIKTNLIDSKKLYPQSIIRNILNIIPYNNRYTKSYLSLAKLISD DYHVEEVRRIPIISNYMFYKEYGIKLDKSNDFEKIQTENLSIHTENTIYKAIMYNDKE TFISFTERGGFDKDQILDSRLYPDSEKGYSLLELCCYHGAVDCFKLLRTKFNSEITET CLQFSFLGGNPEIMSECLKSQTPNKECMKYATISHNIDFVTFLLNDFNININLEYCAK FNLESFLVYFDQTNDIHRCYTYSALFEMLSLCEYFLSLRTNINISMGEYGTALHIAAM YNCKEIAEFLISHGANINEKTNKGSTPLHDAAKSNNKEIAEFLISHEKRTALHDAARY NSKEMAELLISLGLNINKKDRHENTPLHDAAWKNSKETVEFLLSHGANIKEKNNVGKT AFHLAALNNCKETVEYLLSHGPNINEKDNNGYTALRIALDDSKGEIANLLLSHGANVN EKDKNVKTVLHFAVEYYNKKTIEVLLSHGANINEKDRYGKTALQYALDYNKNDIAELL ISHGANINTNIKDAPKYMLI" gene complement(144429..144509) /locus_tag="TVAG_239010" tRNA complement(144429..144509) /locus_tag="TVAG_239010" /product="tRNA-Ser" /note="anticodon GCT" gene complement(<144612..>145274) /locus_tag="TVAG_239020" mRNA complement(<144612..>145274) /locus_tag="TVAG_239020" /product="hypothetical protein" /note="transcript TVAG_239020A" CDS complement(144612..145274) /locus_tag="TVAG_239020" /note="encoded by transcript TVAG_239020A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20529.1" /translation="MEKETLLIDCDGVLFPESALPIAKITQSLKNAALKIGYSAADIK EARKKAEKNQELGLFNSIWELSGKDIERFESICSEAFKTIDYSKIISNRKLYDLLKNA SEYYNIFIATNNHLLHFRKVFERLFEMEFSDDCFITCIDITQTLDNGCFHPKQSIDGL KIFARVAKTRPEMCILLDDSSINIQRAKKINMKSMEIGLVQNLEFCLKELLSSQMSRI KV" assembly_gap 146654..146753 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" mobile_element 146785..147249 /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" repeat_region 149221..149347 /rpt_type=tandem /rpt_unit_seq="actg" /satellite="microsatellite" repeat_region 149796..149922 /rpt_type=tandem /rpt_unit_seq="actg" /satellite="microsatellite" gene complement(<152182..>152418) /locus_tag="TVAG_239030" mRNA complement(<152182..>152418) /locus_tag="TVAG_239030" /product="hypothetical protein" /note="transcript TVAG_239030A" CDS complement(152182..152418) /locus_tag="TVAG_239030" /note="encoded by transcript TVAG_239030A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20530.1" /translation="MTTKVTEAMKQKFLVEYIKSGAVPEGFYVHTMKDGRVQFRKIKQ PLDKEGILRKIKLHEDNIAELKKKLEELEKGREL" gene complement(<152467..>152925) /locus_tag="TVAG_239040" mRNA complement(<152467..>152925) /locus_tag="TVAG_239040" /product="hypothetical protein" /note="transcript TVAG_239040A" CDS complement(152467..152925) /locus_tag="TVAG_239040" /note="encoded by transcript TVAG_239040A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20531.1" /translation="MSSSSSSREPSPSMKQTLPNDYGAPIEYFLRAAQWQRAVSPRLG VPPAPVKNSIWSSPYIKYGLPLGLLATAGAVMMLKRNKANVINNTEVAEVKQTPTHSP KPTPSQAKPSITPEPMEVQTPVQKSTPKPTPTFKPEPTPQINRKTPAFPY" repeat_region complement(152956..153378) /note="repeat family R488b" assembly_gap 153405..153504 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <153642..>154217 /locus_tag="TVAG_239050" mRNA <153642..>154217 /locus_tag="TVAG_239050" /product="hypothetical protein" /note="transcript TVAG_239050A" CDS 153642..154217 /locus_tag="TVAG_239050" /note="encoded by transcript TVAG_239050A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20532.1" /translation="MKVFNTKLQTVVREQLTAEGHPLPSEVSIAYNFETNSIDFKVIS AKKSGFTFNEADVYSNENFKAIAWLDNDDCFKKIFKFSDSKMSIDDLRGMLPSTFTVE GSAGLLTRLSIGGIWSRENIVIKSSISEFAEESILCLSNYMYSPPKHYSITNFVSKFN IRLVEPSSMKDVVLPKDGKDGLIIEMILIAY" gene <154416..>154928 /locus_tag="TVAG_239060" mRNA <154416..>154928 /locus_tag="TVAG_239060" /product="hypothetical protein" /note="transcript TVAG_239060A" CDS 154416..154928 /locus_tag="TVAG_239060" /note="encoded by transcript TVAG_239060A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20533.1" /translation="MVAWAALGAMGTKALAFGAKALGAYDAVNKMSGGRFSKTLDANK GKIGGWVAKKLRLNKIGLINKASNLVATESENALGKDDEFAKHAKDFNDQMKGETMHL NRVDGTLPPPAVLPYGPYGMYGNPYERPFDPLTGGSNWYHYGRRRKTVKLETDVKKAT KKKPRKRVIK" assembly_gap 158028..158127 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <160136..>161620 /locus_tag="TVAG_239070" mRNA <160136..>161620 /locus_tag="TVAG_239070" /product="hypothetical protein" /note="transcript TVAG_239070A" CDS 160136..161620 /locus_tag="TVAG_239070" /note="encoded by transcript TVAG_239070A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20534.1" /translation="MFDEYKDEKDAKHEDSNDLLNSIKDENEVSQNDIDESIDESSLK DFEEFQTKIHSFSNSPQDILYLYNSLIQNNNSDLELFQQKLITIEELGILPQIISSIP NFAPEIIAISIEIINLLISTSDDLMKLLTEMNGFLMICDISLANIENLQIVINCIEFI KLFIVSPSNDEIIYCTCENEVNPNCVYCKLINFLENMKNLLQSKIYESTSSLLVSCLN VYTERNYERILQLSIDFISISIQQETTDDFLAKTVSNITNGLKQFGDEDDENKFTIIK FIFESELRNILFQQEYSTLKIPIFNLISQLFQDLINRKFDEHTNSIYDLMNKCIGTIP LEFITTYFNEKSNPDFLPSIVHLMTIIVQVPVTTSTLDPALQNDIRFNNFIIDHLINH VMFLLDSGSLKTKELAIEFLDFLSNIPTSSILMHKFLSQQDETSGQLEFIDNIHMLYE LGDPEIKRKVVTVLSRILQLTNKEEVIEKINNTFCEEEDEDDDY" gene <162342..>163388 /locus_tag="TVAG_239080" mRNA <162342..>163388 /locus_tag="TVAG_239080" /product="hypothetical protein" /note="transcript TVAG_239080A" CDS 162342..163388 /locus_tag="TVAG_239080" /note="encoded by transcript TVAG_239080A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20535.1" /translation="MPKKGAKKNKFNELRSIFIHEIDIYNALYQLKTDKEEELNDIYK MIKTELIDSKKYPPNNIMGDILNIIPYNNRYTKSYLSLAKLISDDYHVEEVRRIPIIS NYMFYKEYGIKLDKSNDFEKIQTENLSIHTENTIYKAIMYNDKETFISFTERGGFDKD QILRNSFLYPIFFSLSPRQGYSLLELCCYHGAVDCFKLLRTKFNSEITETCLQFSFLG GNPEIMSECLKSQTPNKECMRYAIISHNIDFVTFLMNEHKIKIKLSYCGQYRNFESSL VYLDQIKDIKKCFIKSAVLNIPSFCKYFLSHGAKINAKDEDGRIALYFAAGNNSKETA EFLISQGADIDVKI" gene <163466..>164212 /locus_tag="TVAG_239090" mRNA <163466..>164212 /locus_tag="TVAG_239090" /product="ankyrin repeat protein, putative" /note="transcript TVAG_239090A" CDS 163466..164212 /locus_tag="TVAG_239090" /note="encoded by transcript TVAG_239090A; Probable pseudogene - evidence: frame shift Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="ankyrin repeat protein, putative" /protein_id="EAY20536.1" /translation="MNDSRDIIEPLLSHGTNINEKTKFGETALHIAVERGYKEFAESL LSHGTNINEKNYKGQTALHIATRNNRFDIAELLISHGANIYEKDDKGHTALHYASANN SMETVKLLISQGMDVNETDKCGMTALHHTTYGNCKEIAEFLISQGITINKKDDTGETA LHSAVRNNSKEIAELLLSHGVKINEKNKYGYTALHLAAENNSKETAELLTSHGADINK RNEFGDTPLRAASKKHCNETVKLLKSYGAK" gene complement(<165888..>166907) /locus_tag="TVAG_239100" mRNA complement(<165888..>166907) /locus_tag="TVAG_239100" /product="hypothetical protein" /note="transcript TVAG_239100A" CDS complement(165888..166907) /locus_tag="TVAG_239100" /note="encoded by transcript TVAG_239100A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20537.1" /translation="MFIKNYLSSSVSDIDHLASKMEASANDIKAQGSAFNMLCTSLMD LVNKECQNYSEYFGRIVTNFNAITNAYYKCADLHLRAADDLKDISTRRAVVQRMEKDI DTTRKKLDAVVVKQTSLEAINPLTPSQMNQLQEAKTMKVELATQLKGLLVAFQEYKPK FDKFVFNRVKSAYEHYGQGLEIKGSLELSMYNSVMILFRSIRDHAKNPQQIISSYKPQ GVQPDIVVKDTPNPAPQEEAPKKKKAPAKKKPRPKNSGEPGEIEIKGFMYDGKMDEEE KQQNNHPNEGEKTENKDLFTFDDEDKEFNVSYQVKKQEPEPFNPEIDESKLDVNEIAK ELNLE" gene <166984..>167781 /locus_tag="TVAG_239110" mRNA <166984..>167781 /locus_tag="TVAG_239110" /product="IQ calmodulin-binding motif family protein" /note="transcript TVAG_239110A" CDS 166984..167781 /locus_tag="TVAG_239110" /note="encoded by transcript TVAG_239110A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="IQ calmodulin-binding motif family protein" /protein_id="EAY20538.1" /translation="MSENSGIFYLTKGPTRASRPSTATSRNRPKTAPKSTKIFDLQTL KAKIEELEKKNARISNKITHLQGAMVSQQQRTLLYNDFEMDLEDDLKSLEKRFTKLNE ITKEINAFADPTKNTYDYIPPRIEEENYPERTKQRRENEILAQQALYNERKIMLLEMK LKLNHDRRDLALLRSNLNLFEGGGNSITSDREIEENLKIQIENIKMHQNHEKRRIEHE KSPIISLHDAATTIQSLWRGYRYRMQNKEQIEKEHEELSHRNLSERS" gene complement(<168026..>168292) /locus_tag="TVAG_239120" mRNA complement(<168026..>168292) /locus_tag="TVAG_239120" /product="hypothetical protein" /note="transcript TVAG_239120A" CDS complement(168026..168292) /locus_tag="TVAG_239120" /note="encoded by transcript TVAG_239120A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20539.1" /translation="MFLVTEEQLRNYAPPIQILMLAMALALVAVFFYYSFWESFYKIV FTDEPRTGADYAAFALSIGNIIVIISTVFRLLKHSADELKKKLK" repeat_region 169800..169866 /rpt_type=tandem /rpt_unit_seq="ttata" /satellite="microsatellite" gene complement(<170871..>171311) /locus_tag="TVAG_239130" mRNA complement(<170871..>171311) /locus_tag="TVAG_239130" /product="hypothetical protein" /note="transcript TVAG_239130A" CDS complement(170871..171311) /locus_tag="TVAG_239130" /note="encoded by transcript TVAG_239130A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20540.1" /translation="MDSNSATSKDALFTFYINEEIKTNTQNVEFTLSSPLKHTPSSDN HIFFDNSSKTPKKDKKIIIIGVAVAIVIIVIIIAAVILICEARKPAKQFSQENVEKYD INNGIGCEIDNPLYTSNIQEIDPFKDDFSDDQYNGNIVLKSMMP" gene complement(<171697..>172869) /locus_tag="TVAG_239140" mRNA complement(<171697..>172869) /locus_tag="TVAG_239140" /product="hypothetical protein" /note="transcript TVAG_239140A" CDS complement(171697..172869) /locus_tag="TVAG_239140" /note="encoded by transcript TVAG_239140A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20541.1" /translation="MISLLVLPKLISSSSSSKELSYKFVSNSAFGNRLPGNFEILYGG EKTSYKSNGWASVFHVNNYPDVQILGSNNGVASSHNVNISTRLTSLFDNKWILIEFIA KNLGSEPCYVSIASYCDIQLGNNDRAYLYPFAETRGLILEDQYGQNGQKTKLKMIVRD GYGVENIDTFWYGRFFDARIQFWNNITGPYPVFDNEIDTAFSLGWKDRLLQPQEAFGI LIGVDNNLNTPPTISFANEFKKLYSPGENVEIIVNVKDFELDNIIQLFYNYSNGSENK VKELVGSFKTRQNKLRETMNFTIDLGNEVDSYNLTIWAEDNNKLSNVLVKRFLVNTEP VLKIIKSIDQRLFIDGAFDIYGTIWDDTFSYITYKIDNSFGANIGSPILQQNREKF" gene <173802..>174440 /locus_tag="TVAG_239150" mRNA <173802..>174440 /locus_tag="TVAG_239150" /product="hypothetical protein" /note="transcript TVAG_239150A" CDS 173802..174440 /locus_tag="TVAG_239150" /note="encoded by transcript TVAG_239150A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20542.1" /translation="MESNWRTIGENISKYIDDDEFLSNTKPLQMCKILNYATLTSNQF ANLFKNLSEHYGKDDMFKMMSRARTVDFKTFQEVEEVEDTFNSVLGIPTLSKIFSFYK NSPRTEANSKPNKFHASILPRSISLGCGGYRVIIKISGLTTDVYGVRDDMDSTEFLKQ IAQAAVLTDLSLSPHDFVIRLLNGKTILNSHPLSDYKMHDGSVLKLYLRSRV" gene <174474..>174995 /locus_tag="TVAG_239160" mRNA <174474..>174995 /locus_tag="TVAG_239160" /product="hypothetical protein" /note="transcript TVAG_239160A" CDS 174474..174995 /locus_tag="TVAG_239160" /note="encoded by transcript TVAG_239160A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20543.1" /translation="MDVNVNIKINDGIFSFVYPSFDEGSTWKVKAYPSGEIEHLGKKM RYLFWETLFYPNLNMGRGFIIKGEDCVDFFHDKLKMMNLNDCEICDFITYWCPKLVSY KFVKICFQFENFDDMCPLTVEPKPQNINRVFFAALPLDSPCDIEPQDLPRFNRDGFTV IEWGGTIVSTLNY" gene complement(<175420..>178887) /locus_tag="TVAG_239170" mRNA complement(<175420..>178887) /locus_tag="TVAG_239170" /product="hypothetical protein" /note="transcript TVAG_239170A" CDS complement(175420..178887) /locus_tag="TVAG_239170" /note="encoded by transcript TVAG_239170A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20544.1" /translation="MSDLEEKVRNYAKQLDEIKSQSCKPSETEDYEKQIEKLVNTIEK ASYQSEIYEETEVFKIDDEMINGFIDSNFRKLTTSTEAAVNDVKELDQSKILLTALAS SELKTDSPLNNSSQFQDDGVFVNTNMLVKDENAQRVKNRLKRTPKDRVFLDEQSNLKL DPLFIRQTPPQLNYKYKKGDYIENVPYYSVDEIHTSFYPAFFWDPTNVSVNDILRVEI KNIKYDVHALSSDQFYYSKKLESLYNAYMQHSNESLIAFYKSRIKILRHSLKENPDNK VEILSDIINCREEIDKEEQKLQSYKDQLTVIWQNLQQLRSNSFVETPIALKWYSKKYS EEDKTKLQKKQEKTFKKRINEIIEYNYLISGEKLEEKQLYNDLMKHRKQLGLPNAGDT EWNPKLTTVETTEDSKIPNSEVQRLNQASETYNYVKIIVGGQQAISMASSLDSDFTSQ VNFGAKFIITRIPKYINIEIWEQSKNGVFKVCDTTLPVFNGEPAKYYENHFTSDTPLS NGKLVEGNILGAAFICVNPNASITRIRQNKPHQKAEKQISVSGIPGRQRTFACSAVSE EHCDPNDPQIIEALSFNADPNDNKDRDMMRFKLDNKKNDTLLASMAPTIVFKNPIDIR EKKKEEKEENKICYDEIVSEIKSESPFSILKKIWNFLFMKRRPLFTYEQEREATEEPQ TLFVRISALMNCPKRTEMCLIDKELNSQGYYSENGKKPRISMIAICEDQVYESTPMKT VADRWDCEFEIDVSKCPNFYLSNLTLNFFDNVEYQFPQLGNKKESHYIGQLEIPLSSI IENKCNLNGTFSINTPMTNLTNSNDKLMRVQMSCSINKNNLFKDTKDDDTMLDSNGIP LCDYLYKISLPEHEKDVTSILRFVSMFPVSQKDQGIVFNAQEIIDNSLGSSLELCILL SCYLLTLNYNPCIILCNDIIRGENAYVFVEIDGSKYYMDPTKNKRYLYCPFYRVNAII DKDGVYLPLTSVYNPDYHDQVYWKKVRTAKSKQQEEIEIKYAEPECDTEELSKAIFKA VRSTAKKYSARKIKWNRSVSLNLEKIIDACENQLQTGTISNDVSFYCEASAIRAIGAP FVHYYFMRDNDLDNFIDIVCATLENQHFYSIEGDNIISGLSVKVFPHENGIYAVWVFL ASVHKLSND" gene complement(180205..>181451) /locus_tag="TVAG_239180" mRNA complement(180205..>181451) /locus_tag="TVAG_239180" /product="hypothetical protein" /note="transcript TVAG_239180A" CDS complement(180255..181451) /locus_tag="TVAG_239180" /note="encoded by transcript TVAG_239180A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20545.1" /translation="MESNWRAIGENISKYIDDDEFLSNTKPLQMCKILNYATLTSNQF ANLFKNLSEHYGKDDMFKMMSRARTVDFKTFQEVEEVEDTFNSVLGIPTLSKIFSFYK NSPRTEANSKPDECCCGSNSLANKPPKSISLGSGGYRVKVNCMDHFIINVSGVRDDMS STEFLQQIAQAAVLTPNDFKIVFGIRQFFENHPLSDYKMHDGSVLKLSLRNRGGKPVI YLYPKKEMDVNVNIKINDGIFSFVYPSFDEGSTWKVKAYPSGEIEHLGKKMRYLFWET LFYPNLNMGRGFIIKGEDCVDFFHDKLKMMNLNDCEICDFITYWCPKLVSYKFVKICF QFENFDDMCPLTVEPKPQNVNRVFFAALPLDSPCDIEPQDLPRFNRDGFTVIEWGGTI VSTLNY" gene <182316..>188894 /locus_tag="TVAG_239190" mRNA <182316..>188894 /locus_tag="TVAG_239190" /product="PIKK family atypical protein kinase" /note="transcript TVAG_239190A" CDS 182316..188894 /locus_tag="TVAG_239190" /note="encoded by transcript TVAG_239190A" /codon_start=1 /product="PIKK family atypical protein kinase" /protein_id="EAY20546.1" /translation="MDLRQRKKNVIDMNPPALQTYITQLCDNINQNESILFKVAQNNF QFYVESTYRIAEDSNEASYFLDELFVAISLQQQSAINHIYLLNSLIDVYLGDKISKAN RMTRDLINLPPIPNQKVWDGLAILLNWMAKTLRASIQLILKPLADSMWRWCYSKEIDH CQSGLMLMKLFLTNFPGFLEEHFFQVQSIIRSSMENPNDMIRSAAESSLIAAISKPET REHFRVVTLCASLNFTLSEKKWQDFAGAIKAANIVVSIIPENLACFTFVSLPLSFLNE RDIECQVATLKVLTFALQTTPSLFTAEIIVNILNEFRTLLKKKSNYRREILFTFGDFL LQRKPPYFTKEITIIQKLRASLSDQIDCEQACYAIIGINSVLDLNASEFNSIYQQPLT DVIVDGLVKLSKNNPDKRSFVLNSFISLANTLILSQASPQQIIVYCNGFVKLDIPPQY FTTTLIYQCLLFLSNPELAVRTSVTSFISNYASKKQSNDVSKLLLSAACTEPNLDLKM KLVTSSTLVPPLDDTYFIPIKTLLHDESANIRKAALDLLATHVDDPKVVVIFKDFLSE QVSILKNEISFSKSAIYSILMIATSLEKENPSFLNTLFSPFSTFIILHLVEIKDKLPT CALSLLSHVIDISSADVDVAKLTKVHISTSLTIHSSKKRLDAALELIMAALKYTDLKF SIYRENFYLVRMLFDLGSLGESDVTRSKLLSVLSMIGSVRQDTFESDLVRNAMTAYST SYFISLLESNSPVECLIFASAGVSLSLLFSILRDESFSALHASTIEALLAVIKVQSQF GNRLENTLIKQMNDLLTHCGQSTSNILLSNITTLIAVLGDRFRPLVPHVVDFICQKWT KLDKGQLIRITDWLVNSAHDAAEPFIPRLATVFINGIMTYDDRTVDSIFSVFMSFSEQ VAAITHIIYPPMLLWISYNAKSPIINDVLTRTRFIFVNSDTSQFCGQIIQCMIDVIKQ DHILQDKILDILCIVASHCGMSFLLFLPRLNGLFDVFSHPVLKEIILTLKNGGKISEV KKLMNFVSPDSRQQAVLNRKKSTINKPREASFVAMAPKQASDEIQWLNWSNDFFYGIV KNSISRAISACYTLCMRHAEVCRTIYPLAISLVYVISLEDKSNKGNIVTIFQSVFSEN EAPRSVIRHFLAAIEILEILNIKTPISTESIAMAASKSGVFQQALRATENLYEQGNFD LAEKLIILNQSLNLPLAAQGILKQSRQKGLVVKQDLLYEKLGMWDDALEMAEKNLISH PKDYNLLLRKIKCLSQLSRYDEIRLYNADLLMKANADIHLFDYSSFMKSCEELSKKKI EYENDDYFWYLAIYYVIKKENSKSIKIIEELRQQRISNLFPVIHEDYERAITPLSEID ALQQLYEIIDVLKLKDLSNSPLPNERNKANSEISKILQVWKERFKLMHKNQQSLHRYL YLATIAFEPKDLQEQWLFFIDLSLSNKSYSLTKSVINYLNQKVTEKESLFRNKLSIFE CKLSHCLGDTESISRLQNIMNTLNGNDLLEECANTLGIWLSKPEKIREVLNQVYKTSK KPETFEKWSRTNLSLYKTTKEMSYVEDALNGAISGLIATEGKTINLSLLLLSLLCLVP EDDEKTMGIFRDRMKEIQPHKWIDIVPQIIARLTRDDTCFHKTLFDLLFYIGEIHPNA IVYPMMVQYKSDNDLRRSIAKRIFEKLEMKYNNITNNITDIANEMMRVSVSWFELAYQ CIDESSHEFCPDVNKQMMLKFLDPLKEILSKKCETCMESKFFAQNYSHLKIAFGLLKK YEENDDLGSLNEVWDHFSTVFNKLRNVCNDMNELKLQEISPVLFNLHNSDLAVPGTYE FSKPLVYISSFKNVIKIINSKQRPRKICITGSDGNKYKFLLKAHEDTRLDERVMQLFD FINTLVDNSVLRMKNFLGMTTYRVVPITGEVGLIGWVNDCGTLHEAVKESRRKRGMKI QAEMQSTINYAPNYDTLKLDDKLIAFKKGLQATDGLDVRRILLASAPSTATWLTRRTT YASSMAIISMAGYILGLGDRHFSNIMIGKTTAKLVHIDFGDCFEVAMHRERFPEKVPF RLTRMLVNALEVSKIEGTFRTCCEDSLDLMRQNGRQILSLLEAFIHDPLLQRQTNHSG SSNVDDAVSAVKRISDKLSGNDFEGMQGNLKVSDQVELLIAQAMDEKNLCQMFSGWCP WW" gene complement(189752..189825) /locus_tag="TVAG_239200" tRNA complement(189752..189825) /locus_tag="TVAG_239200" /product="tRNA-Ile" /note="anticodon TAT" repeat_region 190387..193170 /note="repeat family R371" assembly_gap 192397..192496 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 193203..194810 /note="repeat family R1479" repeat_region 195187..195522 /note="repeat family R105" assembly_gap 195407..195506 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" repeat_region 195733..196368 /note="repeat family R105" gene <196404..>196823 /locus_tag="TVAG_239210" mRNA <196404..>196823 /locus_tag="TVAG_239210" /product="hypothetical protein" /note="transcript TVAG_239210A" CDS 196404..196823 /locus_tag="TVAG_239210" /note="encoded by transcript TVAG_239210A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20547.1" /translation="MTKFISVNKYMTAVKDKLAPFAYLNVYFYNFEKSTFDKIWNIAP VKFAVVRKSGATFEDLDIEGLLTVKENFDRKFSKLEEGKAYKLVIPYEPKKADDYEYY ESKIVEVQGKLGKKILESKPVFTPKEEENIDIDPEMF" gene complement(<196840..>197292) /locus_tag="TVAG_239220" mRNA complement(<196840..>197292) /locus_tag="TVAG_239220" /product="hypothetical protein" /note="transcript TVAG_239220A" CDS complement(196840..197292) /locus_tag="TVAG_239220" /note="encoded by transcript TVAG_239220A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20548.1" /translation="MTSDFTIYIRDKLFDSKTSVDHKILHSVNKKGEFVLKFCFWEYD KNHKTLSREVLKFVNDRLVDRDDADWKDEVQQKFLECKEDTCAVLEDEIENRIDELLK DKELLHKYSCAKFDITPPEKKKREKKEKKVEEEKKEPEPVPEKKKFDM" gene <197329..>198201 /locus_tag="TVAG_239230" mRNA <197329..>198201 /locus_tag="TVAG_239230" /product="hypothetical protein" /note="transcript TVAG_239230A" CDS 197329..198201 /locus_tag="TVAG_239230" /note="encoded by transcript TVAG_239230A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20549.1" /translation="MLEKKFADIDKKFENVLNKNKRKLENAQIKPIHDKFLFAQNGIT GLIAPPGSGKTFTYLKMAAQQQELDEKNPFYELVVICSTSGQFDQTVNSFKDIIKKSK LVCIKDTELLDWIKKYQRRVLKYNAINEYINSKFKDPNEEMQRILEKKHFRNKQKEIE YISKKLQSYDWKTYPHRCLLILDDFASHPLLKNRKQDMCRILKKLRHFNISVVICVQT AKSLSKDVKRILTDIILFPGLSEDDFMELMKESMAGKFDRHELWEKYKVIQDPHTSFR IHIYANKVQIVKSQ" gene complement(<198217..>199056) /locus_tag="TVAG_239240" mRNA complement(<198217..>199056) /locus_tag="TVAG_239240" /product="hypothetical protein" /note="transcript TVAG_239240A" CDS complement(198217..199056) /locus_tag="TVAG_239240" /note="encoded by transcript TVAG_239240A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20550.1" /translation="MSTTENTTTVIVHEAINEEYEWVQFNKQLRLIRSVKDDMYQMQS ILTACYAPDTKLPKDWFRNQSTQELLSEVQRDILFSENSEEQRVGKKPQSPKLYENRE KLPNGLRGYYVHRLLVNAVAMWASPRYAWYIYRLLDEIHRQEREEMENKLEAKDKSIQ KRIPRSVPKGKEKNYKYMIYTEEMENEEDKDMVMLHLVRRNNKSFYDLAKIYKSDRNR FYRENLPISMTPNEDVKQIVQDTLPQTHYDMKGCTILTFKEDLPLLKEKITEYFDNFK QVG" repeat_region 199073..199103 /rpt_type=tandem /rpt_unit_seq="taaaaa" /satellite="microsatellite" gene complement(<199590..>200318) /locus_tag="TVAG_239250" mRNA complement(<199590..>200318) /locus_tag="TVAG_239250" /product="hypothetical protein" /note="transcript TVAG_239250A" CDS complement(199590..200318) /locus_tag="TVAG_239250" /note="encoded by transcript TVAG_239250A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20551.1" /translation="MEDLIDHLPKLPEIQQQKLTIPEFDEIEVKATDSVEIKKFIRKV NYEFLGFHCNHKVMDKDCDMVYKNISDIYKSGEFKTYDNFVSLAAKCVWQIRDKDRRG KVWNEQIKPTASDLKKTIDALVVLAGKVSMYNAKMNPQCSKCKAAMRKYNYSVKEIER MRNDYADLKKEAEKPVENKMDMLEFLNKNYPTADDFLLSDVKKKYKETFGIVKTFDVL KEEIEATKLFRISNIHRTIHVKRL" repeat_region 200543..200573 /rpt_type=tandem /rpt_unit_seq="taaaaa" /satellite="microsatellite" repeat_region 200941..200966 /rpt_type=tandem /rpt_unit_seq="actg" /satellite="microsatellite" repeat_region complement(201073..201405) /note="repeat family R1569_R581_R22b" repeat_region 201871..202236 /note="repeat family R23a" repeat_region complement(202886..203209) /note="repeat family R321a" repeat_region complement(203359..203949) /note="repeat family R31b" repeat_region complement(206161..207297) /note="repeat family R31b" repeat_region complement(207344..207928) /note="repeat family R31b" repeat_region complement(207948..208100) /note="repeat family R31b" repeat_region complement(208120..208521) /note="repeat family R31b" mobile_element 208632..209498 /mobile_element_type="transposon:transposon-like, repeat family R11b" gene complement(<209737..>211362) /locus_tag="TVAG_239260" mRNA complement(<209737..>211362) /locus_tag="TVAG_239260" /product="hypothetical protein" /note="transcript TVAG_239260A" CDS complement(209737..211362) /locus_tag="TVAG_239260" /note="encoded by transcript TVAG_239260A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20552.1" /translation="MSNETASMREIQQNRQLIMQALNKNTTNFSNYSKISESLKGGDL KLTINPITDEFLFQDNKNNTVCINPTKGTLNEKPINELLLKADVDNKADKEYVDDAIA KEEERANNAYATKEHTHPELADKTYVDNKMSSEVTRAENEYSKKTHIHYINQIPSLKE TLETKADKTHTHSISDITNLQETLNRKSDVGHTHTIANITNLQETLNRKSDVGHTHSI SDITNLQETLNRKSDVGHTHTIANITNLQETLNRKSDVGHTHTSSEITDLNVSLENKA DKTYVNEIYQSLIGTKNIETIVGDFSVNEENKYFRWQLVQSLENGTRYKLIPKNNNEM YVSYKKNDGTQVKVPLDNNCYLNLYGDEQKKYLRVYEMADMTLPDPAPAPYYYDYGDD DRTPHVDEQKLTLYLDYYRYKRYNAIEKTRIVYYYTDDRNKYYSQDFTYPENIRLYYK KYSDTNQNKPEIVALYFKFKRDNPIISHMFDLMNPVGSIYTSMEARGPQVMFGVGAWE QIVDRFLYCANSSKETGGSKRFQVKIYLHTVTT" gene <211381..>212229 /locus_tag="TVAG_239270" mRNA <211381..>212229 /locus_tag="TVAG_239270" /product="hypothetical protein" /note="transcript TVAG_239270A" CDS 211381..212229 /locus_tag="TVAG_239270" /note="encoded by transcript TVAG_239270A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20553.1" /translation="MLPIEKENSRVATTKPLDELFTNVGQKFETDTVKHEGYRFDYPL RWLRDPSVTKAIGFRRMKFISEAIHGFPFTVGFEVRYYNKEKRMYEKFEQGKLLQVSL LINLETTLQAFQEKINDIYIEYANQFNIDEGEYHLDIIYDRKNATVKINKIEDLGENV YISTKYNNLAWYRFMRMLNQPAAYPVHPDYYEVENPNGTYENIFDPDAIIVHASFSGA QNSFLCLMNDFYEKPTKLYEPPSGSISDFQVWFTTDGRKRIIPLYHAFYLELSFIYNY YRTVKI" gene complement(<212234..>212476) /locus_tag="TVAG_239280" mRNA complement(<212234..>212476) /locus_tag="TVAG_239280" /product="hypothetical protein" /note="transcript TVAG_239280A" CDS complement(212234..212476) /locus_tag="TVAG_239280" /note="encoded by transcript TVAG_239280A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20554.1" /translation="MGFFSSIGNFFRRVGRGIWNGIKSVGRGVWNGVKNIGKRVGQFV GIIPKDPEPEEQAPVIQQPEPAPQSSWQPNPTPQPY" gene complement(<212495..>212770) /locus_tag="TVAG_239290" mRNA complement(<212495..>212770) /locus_tag="TVAG_239290" /product="hypothetical protein" /note="transcript TVAG_239290A" CDS complement(212495..212770) /locus_tag="TVAG_239290" /note="encoded by transcript TVAG_239290A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20555.1" /translation="MANYGQVPTDVQMQTAMSNDAALGLPPWYANMRWKEFYTNPEVG YKQLYADDANTGVDPEYVFYQRRNRMYELQLKNAMELNRKRKRLGGH" assembly_gap 212801..212900 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <214377..>215615 /locus_tag="TVAG_239300" mRNA <214377..>215615 /locus_tag="TVAG_239300" /product="hypothetical protein" /note="transcript TVAG_239300A" CDS 214377..215615 /locus_tag="TVAG_239300" /note="encoded by transcript TVAG_239300A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20556.1" /translation="MVLIHLNNQILERINNYQAPDKVTISINNIEIQLTKSFAVAISK LFYSQYLLDNNINRIDIHTDIKSIYTFDVLKDILQYNKSEIECDGTILYDLFHIGMAL ESEELINFYKLNLIDKENLDKNNCIQLLEFYFDNSAKDKISECVDFISSHFYEIDTDQ LKSISQKIGLEILQRIFNNDKLVVEDEDSLAHFIISLAKESETYCPLIENIHFELCNE SVIKEIKNFTDENNFQSIVNSLADSLIRSRNLKPRILGKYETDYFKSGNVEMSASSTY NGTVDVINKYQVNTCFYTANDVNSWVQWKLKQNYAIRPTEYIVRTCQNYSHFTLMLKT WRIEGTTIDGETKVIHEVTNSSLRPDEIRKYSIKTNDKFVSFRLIQTDTNQSTKYNDY HKLLLDVFDFSENVYELKFN" gene complement(216802..220473) /locus_tag="TVAG_239310" mRNA complement(216802..220473) /locus_tag="TVAG_239310" /product="actinin, putative" /note="transcript TVAG_239310A" CDS complement(216929..220318) /locus_tag="TVAG_239310" /note="encoded by transcript TVAG_239310A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="actinin, putative" /protein_id="EAY20557.1" /translation="MSNNRGLLDDAWEQTQIKVFSRWTAKQLSFKGIPFDNVLEEFAD GVKLIQLLEIVSKEPMKGKWHKQPKMRVQMRENCGMALDFISSKNIRMVGIGSDDIID KNKKLTLGLIWTIINKFMIEEISVEEATARDALLLWAKKNTQGYKGVNVTNFTTSWSD GLAFCALINKFRPNMLDYDSLDQTQQKENCEKAFAACKELGIYVFLDPEDLVGTQPDE KSVVTQVAEFFHFFAGESKTQAAADKLKRTIGIQKAIEEEALNYEKQAQECLDVINTE REKLLAQDYDQTVPGVKSKLFNCIKFGRVVRPVIVDKRGVAMKTWGQLVTKCNSNGRP IPQVKEELLPPNLNLKFEEIEKTASDRRDELTKILEELQAKLIKAFDEAANAKIAVCD DINNKAINLTGDLYEQRDALNNYLQQAQEAAGTVKELQPQFVELVELRLNNRVKRTVI AVDGEFEQLIATIKRLIEGNKAAIFEYENKKKIEEYNQAAQKYVDEVAQLKQDLEAIA GELREQRAANVDKSEEIIQKRNGVSDIRPMFQELEKQSLHLGIENTPDAVTAMYTACL SQAQDKITQISKQLVDEYNEKAIAIHEKIGDVHKTADSVSGTTQEKKDGVLKCQSDLT EIKASIQPTLEEPYQYLQSIKYSNAVKYTPNDLTRDSDITFAFLTTLLNQLEEQLQSE SNDARIAAYNELAKKYVDIANEFHQKVSTIDGDRATRRNAYLSAQLELGNKREGLSQL KPEYEALERDTLHIRVNDSPATISKVYANALQIITDKLAEIYNEMVADFDAQVLAIAE KVKVVQNVELTGTLLELKDKIAQSKAQAQEILPELPTLDAPWEDLCDFNLNYRVKQTP ENLRATLEAVIAFLNHQEESNNEKLASEGRESRIFAYNQKAAVSVALARELEQKVSNV DGTLPEKQQKLFDIKQEVIDGDEAAKELTPIFEDLEKDELHLAIEDTPDSIAAFFANI LSHIDGLVREIDTAIAAEKGLQISEEQLTEFRETFNHFDKDHTNFLQYFELRACLTAL GDDISDDQAKEVCKKYSATGEEKLNFDEYVKFMLDHFSKAENADTTAKAFKAIANNNP ILTDAQLDQYFKGEEAEYLRKVLKQVDGGYEFAEWVNSIYA" gene complement(221483..>221841) /locus_tag="TVAG_239320" mRNA complement(221483..>221841) /locus_tag="TVAG_239320" /product="histone H4-3" /note="transcript TVAG_239320A" CDS complement(221536..221841) /locus_tag="TVAG_239320" /note="encoded by transcript TVAG_239320A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="histone H4-3" /protein_id="EAY20558.1" /translation="MSGRGKGGKGLGKGGAKRHRKVMRENIQGITKPAIRRLARRGGV KRISGDIYEEVRGVLRHFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGF" gene 222032..222530 /locus_tag="TVAG_239330" mRNA 222032..222530 /locus_tag="TVAG_239330" /product="histone H3-1" /note="transcript TVAG_239330A" CDS 222036..222452 /locus_tag="TVAG_239330" /note="encoded by transcript TVAG_239330A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="histone H3-1" /protein_id="EAY20559.1" /translation="MARTKQTARKSTGGKTPRKSLGAKAARKSTPTIDSQGAKKQHRF RPGTVALREIRKYQKSTDLLIRKLPFQRLVREIASGFRGDLRFQSSAIAALQEASEAY LVGLFEDTNLCAIHANRVTIMERDVQLAQRIRGERN" gene complement(<222843..>229229) /locus_tag="TVAG_239340" mRNA complement(<222843..>229229) /locus_tag="TVAG_239340" /product="Beige/BEACH domain containing protein" /note="transcript TVAG_239340A" CDS complement(222843..229229) /locus_tag="TVAG_239340" /note="encoded by transcript TVAG_239340A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Beige/BEACH domain containing protein" /protein_id="EAY20560.1" /translation="MILCYQFNEENQIAIEHLDEYIKTQLLGCDLNFPPTTEKQFKYN ENRSISDLPPIESAFRSQEGSLSDLFFALLNIHDPIIDNALPHFLKLTMDAEKYNIIL NLVLLNAGTNEFKYQIKNPVQTFFNPKIFNPCYSLYDSEVSYMISIRKYTLDCFYHFL KQDFSYINSYFEFLSSASSYPWLFAEILAFSKEIFQLINTEVHASILIECICQFMLTK AGKYEDNFFPVIFSTIKSFLTNPKIYEQIMINPLLIDSLFKNTIDCQTCSDIIYILFE NFLETPIDSIFINIMIENFRNDIKLASKIMKIFEKFSNNSQMVSFIHLKLFKDIMMQV GKFNDPELTQMLIDFIASFQRKLDFSKLPFSSMIEDITLNDNMYESLLRMISNSSKFI GIRGEISIDIIRKIFSTEYFVDFMQRVKELVCNSIVECYYCNKFGFSLFLIESVQKRD KIEDVDLILEVFKEINKWNSSRPIMFSYLRLLSNETNKRSRYAEKLLEALYETIKSSQ DQVLYAFLFTPGTGSLMIPHQINYSTFVINIYMILCNLTETQRLITLKTEGETVTFSI SPTTLSIIKNFTVIASKNIPFNQNEWSNFTFQISTNELILYINNNTSVQIKSQVPIIK STVDSMEIFCDELTGEAAHVSVFSGSLDDRMLNVIHSDTTEYTTVIHEPSLLMLYSAH YVEGNHVSNALQNSFESATTTCINLSFISSFRRIFETSKGTHFLTSLFSQIDFNTYQG TRNNGFLMQLLQSFTDIIQGAPQIQDLMEQVNTFAVIAYFLSQPTINEYLNSELWQHI YILEQHIKNPVLLEQFQTNVLLNLEIWRRSAKKECGSFMLCCHRVCQSNEQTFFSLFN INSLCDLFLYIVDENEFTETNISILKTLFQKAAKIRFGQKETLTMLKMVSYFNGNFQK VSVLVKFLKSMAKVRPDMWSFIVAKVFELVDLVQVRILIIKSIPTYLITTAFSLMMSK FDKFSDSKKEEYFNEFNNAIEPNKWNTNLFVFMLCFAFRNRMWNAIAIQSCLLCFESS KFIEKFKNLGISGIGIVTAYFMFCNDKNSVKIFGRFLAKSITITKDVFAISSVIESLT NMNFDNFVADLLTAVIENAFSKEEKSVEEKLEYFHFIVEKIFFRHNHSTINKKPLRSF ETVDINSFILLLTTVRDRVSFNYGYSISEEGKWVDEDLAVELLHQGWLSFSTNCLNMI DYMCLMSFVMKRNINKNKKFLFDENYKIIRESEYAAPLILSVVANAKDLGVDEKVDEN LMQKSVEVFEKFYQYLIQNFDTRKIYFEQVVEFPDFPFDPANSIAEIQSLERAKEKEL AANLRRAWHRLWQTVSHDRSPFISSSSFIMMPHFKIGNHFDKHFMPSVLVVNNHFTNH IDAINKATVLTQELNENKPPSHFFFDKDTNESKSSSIELVDVLWRSPCERIKITKTFP GDFYVIQSGLVFKSQTKSILIPREQVKYLFWVWVNQKPNAIQIYTNSYSCYLFRFPKV ENHKFVTNLLQIGFANAEFIQENPPNIEIERLGLTHKWMRRQLSNFDYLIWLNILSGR SFLDSRVYPIFPIIALKNDTQEMEDKDEDYRDLTKNIMFINPTSSQRMKERLAIFQHN GATPFCHSSYLSNAYTVNHYLIRMEPFTTLHIMMQDGHFDVGPRLFISLQDNINRMMS KMPYFREFTPEFYQNEAFLLNSNDLPLGKYNETDDIGDVVLPTWSSSPADFIYKHRNL LESERVSQVIHGWIDLIWGFKQKGQSAADAMNTFDPQIYPDIWTKTSENNGQEQMMAE AVIAMLNTIGQIPQQLFTSPHPKRNPIVTEQFNGKAVALHNIPDDVACVICSGSVFEK MKIYAALRNGRVFCLRLAATNFEVQLMKHAKIPADPKKIAHFRSETNDDFIFAFAQDH SAKVTILNVIKRSVIRSKTSPHLSEINCISVAKNMILSGGEDALATLWLYDGKDNIEQ LNFIMAHRSEITCCCLSEAFGIAITCSPDNTMIISSLPELTFIRAVDLRMPPGSIPSS VVMTSHVGYIVVFFGNQAETFTANGMFCNTNQFESNIISACIAESKYLVEYVVALLSN NSILLLEPYSLKIVRVVWRGGAKIKEVGYHKDSNNFILITENANVILVPAFFQQ" gene <230266..>231279 /locus_tag="TVAG_239350" mRNA <230266..>231279 /locus_tag="TVAG_239350" /product="hypothetical protein" /note="transcript TVAG_239350A" CDS 230266..231279 /locus_tag="TVAG_239350" /note="encoded by transcript TVAG_239350A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20561.1" /translation="MLSYLLALTREVGIGECADRVQGSTGMYFYSQTLGCSVNICVNI SVYDFYLIINELPANSEVIEYRSYIGDKKLMYSKTYYPPNVPFYIQSSIPFASYTIRL GSEGYCEFMYGSLPNICKTGLILTSEVNKTIQLSSSASGYYKIRSYEDKCILFVLAKQ INVSIKSNADNIDRRFLLYQNYDNPLPALQPNIDFSLDCVFRPFLLRFLSKGQNSFLS ISIAADVALSNNLKTEYREPNNFTKLCDEKECTIWEFMSPNILTLSILFTVLFIFLAS VFVYFMMICCCPKFMGDKKSTTGKPASKKSAILETRSEPEGYFAVDYLITADGRSSPA KDV" gene complement(<233249..>233416) /locus_tag="TVAG_239360" mRNA complement(<233249..>233416) /locus_tag="TVAG_239360" /product="hypothetical protein" /note="transcript TVAG_239360A" CDS complement(233249..233416) /locus_tag="TVAG_239360" /note="encoded by transcript TVAG_239360A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20562.1" /translation="MEKRQINREDLLAEKSKLSEELKKLNQEDLRLQEEYIKVLEEID LILQQMQQESV" gene <235722..>238925 /locus_tag="TVAG_239370" mRNA <235722..>238925 /locus_tag="TVAG_239370" /product="hypothetical protein" /note="transcript TVAG_239370A" CDS 235722..238925 /locus_tag="TVAG_239370" /note="encoded by transcript TVAG_239370A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20563.1" /translation="MSEGRFEETEILLKHSEFVLASLEFAAHQFREDGEIMKMLSSSD GSKIRSFAKNFVKAKKKGDSLPTLNQSLYQTREKIAMQMIMPIRTIDYTVYWCQLSVA QLKVMTETSREFDFRWNLPITLSSLKLFGAFCRIVLYLHHITAAKFLVQLFSSSSLPT TLPLQCQFDDLLDFVSKCQDEPFAFIASQLDFIKEKMSLMVVNLLPFFSTLMGDWTVF DWSMLSIYERSPESTIGDSMPINEYTYLANISFLQEVLTLFTLTFTSFMDENQQFIAL GHAILSETGTFYLSRNFPVSIEELIKVSIPSKSLTGLKSNLQNSINRKNKEVHLYRMK QLLLLASDVVNFSELNFNSFLRSIHIVRAIAAFAYYEIDLFFRTSDKFAKSPDHIKTV SHLLHYIVELAYLFIKRKPDVERFFLYNLATVDADHLSYILNKFGTDLGTAGADVVAT GRLILESLEDLDLAKFDNGIRYDFYPLQLTHGRALHRHNVTSQRLRVSFLTPLCEHLM TISMHASACQDPVNWFLECCQLHTMWRHLNKFDAFISNPSAPIVECTCFVHIFELFNY DKIVMSMHMNEGATAQSILENQIRQSFIKRMFSLMSNLLSSNSRIMQFSLDGPIGQVI PEQNLTRDLRSKEYCNREAEEINSIANANKLIEKLPQTCNVLGKVIDISPYIVRRLTS DILRIVLLNMTTNGSAIINSAPLVWTFFSHARALNVDQFEDEELVFRRGLFEYSLKSA MFAGSSISAQAQAFIGRGSLEPRDITDPSRFIVFISSQMIKFVDTEYDSHLYNHFAES FSSCNHNISYYRNIFRVLGIHPALYLDATLTNGIVENFYIVHQAFEFIRQNLKKPNDV FKHEMAKPASKALLSLSVGLALRNIIRRAISLVNEEAIPGISDIIATTELDDRPECNL LKEVFSQEDTTWFIKTRLLSRIKVHNDGLKDFFTFIATLIAGPFFDDIEFDPENNTLS HNVHLIPYAFQLIIELAPSLFTEASYNKLQGAIELFFTKISQIVESRMKKLKAQNLKA RYILMDQFPKLCSKLEYGRMKHVFPYALLTHSYPETQ" gene complement(239315..>240951) /locus_tag="TVAG_239380" mRNA complement(239315..>240951) /locus_tag="TVAG_239380" /product="hypothetical protein" /note="transcript TVAG_239380A" CDS complement(239320..240951) /locus_tag="TVAG_239380" /note="encoded by transcript TVAG_239380A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20564.1" /translation="MDVDLPLEWRIAVETIRSDPLSYGSDGQSGTSNSFEKILEKEDS TQSPPIELTPLERQIQKANFVANNIQNCVEQLTLAEKKRSDISSYAELILGGSESYSS QIHYINTFVQSIDLFLPYFDSIEKLMLDFMHGVNIDLGASFENIEYCMKFFKFNENFK DSKNYEIKAQSLLNKLESSAKRYINSEFEKITTSNNATYDEIIVVIYNQFISQTESIR NLYKLCEKSVSFSSFLNIYSNTRIRLLEPLLKQILDDLGNNDQACYRILELCNKEYEL FRRFFNVDENLYNQSIMKIIEWIFQIFNQYLIKISQPSILIKLCKIFQKLIKNDDNIH MITKNHMKSTLATLKERLVFRLEASELQIISAKELYETFSDLLELFPSEICEDIIANQ LEMYIKVVSNSDYLSKLNQTEISIYFLYEMKYLQLCFDYVNNNTSNTEYEVGIEPLLC LLANYLHVQAQNISPNPKKVFLSNFFSMKSKTKTRDCSTILADLSSQICKKLKLEKEN VTSISEIKIECPSLPPEIFKDPNFITYLDSIINTY" gene complement(<241225..>242136) /locus_tag="TVAG_239390" mRNA complement(<241225..>242136) /locus_tag="TVAG_239390" /product="CMGC family protein kinase" /note="transcript TVAG_239390A" CDS complement(241225..242136) /locus_tag="TVAG_239390" /note="encoded by transcript TVAG_239390A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="CMGC family protein kinase" /protein_id="EAY20565.1" /translation="MDPRLRYIKQEKLGAGTYGMVFKAKDKTTGKIVAIKEMILDQEE EGVSSTTMREISILKKMNHPNIVSLVDTYVQGTQLTIVLEYLDMNIRDYMKKPVKMDP KLVKSYAFQLLAGTYYLHTHRVIHRDIKPDNLLINHDGYLKICDFGLSRFFTIPIQQY TENIVTLWYRPPEILLHNPIYEISADIWSVGCVIAEIATKTPLFPGDSILDQIHRIFS VLGTPNEEMCKFFKDVKDELVIIPTYPPKDLSDVIKVNDLSLIDLISKLINIDPCKRL TAREALHHPYFNDIPESMKSKFCPGEF" gene complement(<243409..>244128) /locus_tag="TVAG_239400" mRNA complement(<243409..>244128) /locus_tag="TVAG_239400" /product="hypothetical protein" /note="transcript TVAG_239400A" CDS complement(243409..244128) /locus_tag="TVAG_239400" /note="encoded by transcript TVAG_239400A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20566.1" /translation="MDKKGLFRYGAVSHETKVLTQHPRGDFLVDNDINSLLNTLEKSF PISVIEKQSRLYTIRSDKTANYIVMTDKSVDTASCGAFLSDLKKLWNSFSAIEENVSK EDSIPDKFDGQIKDLIEKYNKDRIEDTEDKQNDIPEIILDEHKLPTIDPDPVVTLEES REEPLLGSDATPDLTITFNQEHYDESLTHLRIKICWQRHKITILIALFVIIVSIVIIL IACGGFNIQSCISHQKGSDSK" gene 244207..244279 /locus_tag="TVAG_239410" tRNA 244207..244279 /locus_tag="TVAG_239410" /product="tRNA-Thr" /note="anticodon TGT" gene complement(244440..244914) /locus_tag="TVAG_239420" mRNA complement(244440..244914) /locus_tag="TVAG_239420" /product="hypothetical protein" /note="transcript TVAG_239420A" CDS complement(244467..244910) /locus_tag="TVAG_239420" /note="encoded by transcript TVAG_239420A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20567.1" /translation="MSLDEKRLYESVMAKYNETLERGNKLKERENEINARMLYLCNEI KELELNKPQYEIEHDHLKEMAEKLGEKLKQIENFQASQLSNEVARQMEGLKDLQDKIR RNNEHLRKIDVDHLNAQFLGNIESIKRYIEIIKKRNIKDTKGSLL" gene <245880..>246737 /locus_tag="TVAG_239430" mRNA <245880..>246737 /locus_tag="TVAG_239430" /product="hypothetical protein" /note="transcript TVAG_239430A" CDS 245880..246737 /locus_tag="TVAG_239430" /note="encoded by transcript TVAG_239430A; Probable pseudogene - evidence: point mutation Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20568.1" /translation="MSDKDIHSSKYSELRSIYKCYIDSYNVFYRLKTENEEEINKIYK LIKTELIDSKKHLPYTIISDILCIIPYNNRYTKAYLSLAKLIYDNYKVNEEIRVPLTV GYLFYKEYGIKLNKSDDFEKIKSENLQIHIENTIYRAIMYNNLETFISFTEKEGFDKD QRLESELYPYYKKGYSLLELCCYHGAVDCFKLLRTKFSSEITQKCIHLSFLGGNQEIM CECLKYQIPIERCMKYAIISHNIDFVTFLMNEYDIEIDLDYCGMFNNLESFLVYFDQT NDFNKCFIN" assembly_gap 247729..247828 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <248662..>249765 /locus_tag="TVAG_239440" mRNA <248662..>249765 /locus_tag="TVAG_239440" /product="hypothetical protein" /note="transcript TVAG_239440A" CDS 248662..249765 /locus_tag="TVAG_239440" /note="encoded by transcript TVAG_239440A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20569.1" /translation="MSSLVDMLTNKDGVINFIYENSLNHFDFILNSVWPIVSEYIVSN TKATSTSTKEMHSIYVQTQKLFREIRNLCRNQHSFDQSINEQNIYGKLNLQFYPQLLL AEIAPEIEKIKNSNPVLISGEFKVSTSYQLFEIIKRLFGDEYYIENEIKEIVIIAMKI CLVYKEICQRTTTFKTHFAFDISTFVTKLREVMPKECENPINLIESSLLETKIQREDE TLKEILQKTDANLFWILNLPERIIESHIHKSKLPSASSVLVDSIFKIDNDWINLGTFT SLVYDGIMQIITQKMINLVKSVPKKVEFANRRIEDSENKNEKEKMDPKQVEEELKHLL LDYLHMIALEATRKLNINATENQTYQEIYKYLN" gene <250233..>250994 /locus_tag="TVAG_239450" mRNA <250233..>250994 /locus_tag="TVAG_239450" /product="hypothetical protein" /note="transcript TVAG_239450A" CDS 250233..250994 /locus_tag="TVAG_239450" /note="encoded by transcript TVAG_239450A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20570.1" /translation="MIIILSIVEARRGQINMNLTQDRDNTSKVEQNSLNKSEISNATT ETNNHEISKLARINESNIRLSNNLKQITKNNFTDVKCDKCHDLAHCIWPGICQCPPGY EGNGIQTCKIPTPYSFQYKLGRFAENSTVYMNVSYTGVSSKFNITQVFCKIGNMSLPA INFGHQYAICNTTYSKHGLEISLSFDNIHFGEGIVIGNSFLSGWFSFIGIGLGIIIGI AALILLFTTKSGPLAKKDEVIPLTRDINRSDDFNA" gene <251261..>256000 /locus_tag="TVAG_239460" mRNA <251261..>256000 /locus_tag="TVAG_239460" /product="viral A-type inclusion protein, putative" /note="transcript TVAG_239460A" CDS 251261..256000 /locus_tag="TVAG_239460" /note="encoded by transcript TVAG_239460A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="viral A-type inclusion protein, putative" /protein_id="EAY20571.1" /translation="MQRSPPVSKRAAVKKTPPKQTRSNNSTPDSLKPIKNREFTGIVA PRSDGYEVLIDEMRITQAKMIKQIESLNKENRKLKLELDCSQNQIQENKEEHNNEQNT LKNNILDMKNKLRRATEDIAVLTAENKQLEEQVELYRLSSLKQQSIIDELNSQLSSPQ VIDKPQRFADTKIHLLQEKNKKLLSTVISLRKQQQISNVELSTQKSANRELTQQLTDA LTNEDEDQDTIVHIEDMSSYPEVKKLVEMNARKAKRIESLKSEINFMKQTILEQSEKE KTLIDFIESSNTENQKKLTEMNQRLSDFQNSKISQVTDDSQNTELRKSLDEMKSQLTE LRKKSLIEEQQKSQLKTELEKVQSENSDLKEKLKFSSDTSFDSNYSMDPIFEQELQQK TKEISQMKVAINSLTSMLSENEQNLQSQISEKENELQIAQQNIKRCQDELNSMKAIQE EQGKSFNRIKENVQVLLDDVQTSFSFASLKVTDDMDSLKDVSKFICTNYNRSKDMVSQ LQKENEDLKKELKQSNLKNKELSLTLNDLRSSTEMKLQNTMSQQQMNEERMKEELQKS QNQISTINEMFKQKSIEYEKDLATSHLTIDQFEEEKVNMKTKIDDLLDQLSAFQSRQT DFTSSINSLETTYKNKEKSLSDTISQLNDDKSKLKLKEEQLTNRVNSMESAMLDLRNE NKKIENKKQKLIVENNELKTALEEFTNENKTTLAEKDQKYYKLKETNSEMENQIKELK KEVKEQRKQFEDLKNQSTLSLQTKAEKINKLRLKLKQLQEAFVNLTKEKDQKERENVE LQLQITGQSDTVRRAEEQSQKMTAAKEAGDYVFKSLTKKYQDLQKEYADHLQFVEKSK EDIEEMKKVVDDKEKERSDAVDQMNSTISKLENLQNEKNDIEKENSQLSSDLETANKN NTNLQIERKQNLEKIKELTDNNQELKSQISVLQKQNHELSQNTVLLSVYEKLKNDKDE LQKSFNFINDELHTTKSCYEMEDKEYTDYKDQMTKKVASLTSTIEDLNKEIAKIKDEN DRAAQQDTQTINKLQDQVDSLRGKLETQTAEYSKIDEETKEIRKKSRESVDNIKAKNN ELTQAIENKGKLIDELKNKIKELEDDKKDIMSNYDNLNAQKIEVEKQLNTTQSTQQEK FDDFTRKLSSYKQKIKEMEADKATSERIIRENGLRIDELKSQLRNSVPKDDYNKLQKK IDLLKKEKLLESTVLQKTAFANEVNAEKLKDKFTRKEKDYQDQIEQLKQDRDKKAEAA KNLASQVKSLNQELVKATENKVPMCPKAEKDAISMELKAKVEELALSETKLKNKDQII QMKEKEIEELNKNIEKLKDQIEEIKSNDDQIQELNESISNLAADNKSKDNEIASLTTT IRSMNEKLLSKTKDLEQMKSDMNNKNPKVIQLDNINKIAKDLLNIINSPQFAKQQALQ RLSTLQDSISTIFTILGLPSSNIMPPARALSHQQGPIFYIPGDKSLETKEERKIAELI IREFPELGKEVTDSDSLDRQLRMIHASVNNLKLLLEDRERRIRDMSAIVQSQHNAVIQ ISKDPEATNLVSQSIMNSSVAKDLDDF" gene <257472..>258023 /locus_tag="TVAG_239470" mRNA <257472..>258023 /locus_tag="TVAG_239470" /product="Myb-like DNA-binding domain containing protein" /note="transcript TVAG_239470A" CDS 257472..258023 /locus_tag="TVAG_239470" /note="encoded by transcript TVAG_239470A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Myb-like DNA-binding domain containing protein" /protein_id="EAY20572.1" /translation="MSSLKSVRANRKFSQEEDIKLRCVVSKLGTHSWKSVASFMPGRN VRQCRERWNKFLSPSVNLSPFTREEDVRLLGLYKELGPQWVKIGKHLGNRSDIAIKAR FMLLERHRKKREMSEESSSSCEDNVSESSVSEAPIHNHVKPNRQISAGITSKELNNEI DSLFFSDFTDFFDFNEVFGVEQL" gene complement(<258663..259560) /locus_tag="TVAG_239490" mRNA complement(<258663..259560) /locus_tag="TVAG_239490" /product="hypothetical protein" /note="transcript TVAG_239490A" CDS complement(258663..259355) /locus_tag="TVAG_239490" /note="encoded by transcript TVAG_239490A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20573.1" /translation="MQNDQNKGKKTSNRSVLDNRRIIISIHSSIPIQVITAIKDTIKT IRSVGLDVSEYVPETTISVTYQKKAMKPMIYFEPPSIDEEFLSNIEENSIIHTDKYDD IDLKTYASYFNIILLPKKPEDIVSSLRFVLVENSIIGEGYSVRVYGDLWKEVLSQIPG IDTTYSNAISAATRNRAEMFQSIDSITTSNGKKINERSLKNIELFFTSESPDTLFVPS GNNRKRKEPNPA" gene 259442..259513 /locus_tag="TVAG_239480" tRNA 259442..259513 /locus_tag="TVAG_239480" /product="tRNA-Gln" /note="anticodon CTG" gene 259592..260398 /locus_tag="TVAG_239500" mRNA 259592..260398 /locus_tag="TVAG_239500" /product="40S ribosomal protein S4-C, putative" /note="transcript TVAG_239500A" CDS 259601..260368 /locus_tag="TVAG_239500" /note="encoded by transcript TVAG_239500A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="40S ribosomal protein S4-C, putative" /protein_id="EAY20574.1" /translation="MPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPI NIFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRII YDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDAL KFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVF ATRIMNVFVIGENEHPLISLPAREGVRPSILEGINQE" gene complement(<260918..>262234) /locus_tag="TVAG_239510" mRNA complement(<260918..>262234) /locus_tag="TVAG_239510" /product="hypothetical protein" /note="transcript TVAG_239510A" CDS complement(260918..262234) /locus_tag="TVAG_239510" /note="encoded by transcript TVAG_239510A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20575.1" /translation="MDEYKNLTNEKRHLAENSEEEEHEEEEDIIEFDAETYYTAIQNI ITPENSEIFAESIYIVSVCTKIEDAAIEFLKYKVDNASILKYLLKMLQNDLEIQTILS IFQIFTNCVILGDCANEFYDSDLYLVISTLMHSDLQGDRQGIADFINEHIEFTNEILH FLNALSSQEIPEENINSCRIFWSDLLKFPVISLETEIEMLNSNSFEIIYNILNSKAKL STSIIYNGFVRIAFHRLAQFSTDFDRSYICLRFLMEDDPLNTTEEFPEDWLQVFGTFL TEDHDFNQINKILKIIYHATKHPLLRKNMKEADYINLLIQYSENSNFKNRAISLKILL CLLNDPNDPMLVNFIIDQGNLEFLLPFLEVENQKINKIIVFQLLEIIKYFDENVELLD AILNSEEVLNYIQEIADLDEDESSSPQMIEAAYMIMEEIRARVEKE" repeat_region 264104..264170 /rpt_type=tandem /rpt_unit_seq="aaatg" /satellite="microsatellite" gene complement(<265578..>266396) /locus_tag="TVAG_239520" mRNA complement(<265578..>266396) /locus_tag="TVAG_239520" /product="hypothetical protein" /note="transcript TVAG_239520A" CDS complement(265578..266396) /locus_tag="TVAG_239520" /note="encoded by transcript TVAG_239520A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20576.1" /translation="MFKSEQLINENECDYSNLKPIEVFKYPTLAAKIILDVNSSNISQ SSSQINDLIKNNRITIQMALYLIDKFSKVRPKEIESFSKLYQNILIEFSCITKPKNEK LAAMLHNKRFKLENYNLYSTNSPLFYIAFDKVDDLKSKFPKFNVYRKIDEITPLDWAI KYGSELCFNYLKNMGALYTNNSEEYAVQGGNKNIFMQMIEDGKSFDKMINIALEYHNN EIAEYLKSNCGQTFDSIAESMYFGNYDVASYLLSHSANVNKIYILFLFILCVVF" gene <267062..>268417 /locus_tag="TVAG_239530" mRNA <267062..>268417 /locus_tag="TVAG_239530" /product="hypothetical protein" /note="transcript TVAG_239530A" CDS 267062..268417 /locus_tag="TVAG_239530" /note="encoded by transcript TVAG_239530A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20577.1" /translation="MQVVKNDFLEELELAPTEELIPTNVNTDEIHNLISLTLESASKN DFNQLATSIKNLRIKIVPDFRMYPNILNNIDNSQLFSVFLSLLSIDVPTIVQDSLSLL TAITKRNKQYSQMIFDEQMIPIYIKILGSENIVSRKFVMTFLLNNMQDHQEIGLIFIY YFLQPADIVQLTPYYALYILKELEYFKNIDNLDFTNVILRLQDYIEAGDKNAIRYSIT AVKKGLEEEIEAFRDFCIQNCWWELISTKAICCPVTSIRIIGYETLGVLLPFIPLEVL SEKPLIPLEYIYKCFIYTDDSTGPMLDFIHEYIEVFPFYVREFVETYVYEELTCFDKL VSLMANGKRKLLDGCIKVLVDIIMKASGNQLKKMTPGSTIPAMLDWIETSDNNQLIGD ILSALQRWIMSMKSYWPLDTILDFFQFPLTEDIFTELLESDDDVISELATKILEDLSG E" repeat_region 268769..268821 /rpt_type=tandem /rpt_unit_seq="taaa" /satellite="microsatellite" gene complement(268941..>271175) /locus_tag="TVAG_239540" mRNA complement(268941..>271175) /locus_tag="TVAG_239540" /product="hypothetical protein" /note="transcript TVAG_239540A" CDS complement(268959..271175) /locus_tag="TVAG_239540" /note="encoded by transcript TVAG_239540A; Identical to: GlimmerHMM gene prediction Covered by: TigrScan gene prediction" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20578.1" /translation="MIWSSETDRETARFKLGCVERNKAVLIDCDSDLSLVAYTQKSGI VLVSNVFDPEIFTFPAETQVTSLCALDRNKVLIIYSNRTVSIFDAEKRIFENINYPFY QRLNFFRNPIINESIILVNGHDKLYGVLSGYLTVFDLEYQPVKTISIPSGRPVSATMF DDTIYLTNDRRQVIRILNVNSEESQVTTQELDESIDLTHITAISNTACIVCSSWSAHL ISFSEFVLSLRCSDTFDNFIIGIYGSQDTLRVLTTSGGLSRLFIANPENSIPLLELLR SVLRQFIHGQNVFNVLRNHNISLEVFNELDTQFAETNITLIKERLAVHRELYRLAGQY FGKFDTSFFSSNHFKMSIFESALNDDFGELSDLIRSAAQTSDISSLFNFFAGNPQKFA PSFLRILERSMDSMEHAGFETHQKHNFVAETASFEAALIACLQFCDVRSDTFCGLVRI YALTQPSSQIQIMRLFEVRSADAERIAIEAECYTAIAEMSHRDCDYNRFDRCYQKHGD KCVKSLISYYADREVPYVSDLLEVGKFHGFRKSVQESLSFDESALAFHYIQESGADFV KSANLFYEYVRANKNELSVSQAASLLAIANLCVIATERKDVAPLRRKIENRLTLLELQ KVRGLGALDILDSNDLVKHFMKMGEQGTTLSVIAATFDDRNDDENGQLYIDAIMMDAN IGEKNLTQLLEATGAAAVLPKTLKANLEKKIKDVALKTTISNAFTVAHKNIVNSTN" gene complement(272222..272677) /locus_tag="TVAG_239550" mRNA complement(272222..272677) /locus_tag="TVAG_239550" /product="hypothetical protein" /note="transcript TVAG_239550A" CDS complement(272244..272672) /locus_tag="TVAG_239550" /note="encoded by transcript TVAG_239550A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20579.1" /translation="MTAPPENLLPLPLDDLFDQIKKRAYESPDKQKLITTELEKLLKK VNKLDTGIYVDEVANKEILAQMQEKLKPYVSKDMKIVELRKLGQLVAQKSGVPITESE KKKVNLLYWFHMHWGTLKVWLDNIQYDQSRDMQREANPYQ" gene 273159..273230 /locus_tag="TVAG_239560" tRNA 273159..273230 /locus_tag="TVAG_239560" /product="tRNA-Glu" /note="anticodon TTC" gene <273833..>274903 /locus_tag="TVAG_239570" mRNA <273833..>274903 /locus_tag="TVAG_239570" /product="hypothetical protein" /note="transcript TVAG_239570A" CDS 273833..274903 /locus_tag="TVAG_239570" /note="encoded by transcript TVAG_239570A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20580.1" /translation="MKKSKAHFLWLLYTLSDKCNDTKAKELCQNLDAMDSQEFLGYFS DIKTYILLTNYIFDVNTDAPIDILHNHGYYRYGDASIFAKSNFDEIAFINLIECYMWA SLDRKIPTNVLVKKVGRTKVFSLNDPEAIICSWINTCCSTYTKLRPVTSISQYFIGSN QFRALLYSYTRDESLLQYSDPKTNAEISLRTCSTYGIKQTFEYENYQQSPLVIMCFLV DAIAKLDSIKPLPRPRTISRMDMQRIEKNISDTKKEVESLKIRCGVLANDVNLIAARL VRMKRPSTSISAVKSKPQLPVQMQFPDGPGLPPLHDLQSDIPDDRPKSALHVKWEIPV EMLSNRGGGKLKDPQSSPVESL" gene complement(276937..>279045) /locus_tag="TVAG_239580" mRNA complement(276937..>279045) /locus_tag="TVAG_239580" /product="Elongation factor Tu GTP binding domain containing protein" /note="transcript TVAG_239580A" CDS complement(276991..279045) /locus_tag="TVAG_239580" /note="encoded by transcript TVAG_239580A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="Elongation factor Tu GTP binding domain containing protein" /protein_id="EAY20581.1" /translation="MSQWIDDIDLEESGSDAKEEEPEEEEEDGPAAWEQAQESSESEE EEAKKPEPVKPEPVKPEPIKQEKETSAPKSKIQYTEMEAVPEHQRSPICVIMGHVDTG KTKILDKIRHSNIQDGEAGGITQQIGATYFPESEIKRRTQFFKGPFKLEYNIPGLLII DTPGHESFSNLRSRGSSLCDIAILVIDIMHGVENQTLESLQMLVSKKVPFIIALNKID RLSGWQSKDWREFVNGVKVQDQHTMAQYQKGLQRVITQLGQQGLNGVPFNNWVRNIST KIELEDVPIVPTSAITGEGIPDLLAILQLRAHIQMKNRLTSKNELQCTVLEVKVEQGM GTTLDVILVNGVLHVNDIIVLAGMNGPIVSRIRALLTPAPLKELRVRSEYLHHDKIYA AMGCKISGPDLQSAIAGSELFVAHSDEDVEILKKRVEADITAITSSVNKNEDGLLVQA STLGSLEALLSYLKSQNVNVAAVGIGPLYKKDIQQILHIAQANPKYACVLCFNVEISA DAKTFAQQNDIKIFSAEIIYHLTDMYAKYIEDLKVKAREAARAQMVWPVEFQYLEKSL IHRSKPIIIGIKVLDGTLKKGTPISTIGENARFIGTVDSIQVNQQPIEEAKIGQECAI LIKDPASWSPEADKDFHPKDIFVSKLTRPLIDLLKEHFRDELAREDWELVRKIKGYLK II" gene <279544..>280518 /locus_tag="TVAG_239590" mRNA <279544..>280518 /locus_tag="TVAG_239590" /product="hypothetical protein" /note="transcript TVAG_239590A" CDS 279544..280518 /locus_tag="TVAG_239590" /note="encoded by transcript TVAG_239590A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20582.1" /translation="MNDITNQQLQLAEKYISTLADKEIIRRYYDVKNKLLSDSINTNR SIENASKSYSRSKIGRETAIDGESVSRSINSDDPNEPDSICLKLHEVQKKIITGQLLQ VSTDPLEELETLKRVVQAKIQSLSLVRNKIRDENIRLTNDFKELSAQYNAKLSEVKEN GNAEFQKIVDEETALNDKYSIVESELEDLREEYDSLKGENEEKIKNLTSISLQDCQSD NQLKKLAELIQTKRREVESLQKNIEKMQQDIEDKSKSLSKKKYGTDDEKLLEEVVHLT EQIDLVKSQNAQIELKLKKYPILVPETTSPIDIDEDEMARQILFNNVK" gene <282896..>284269 /locus_tag="TVAG_239600" mRNA <282896..>284269 /locus_tag="TVAG_239600" /product="hypothetical protein" /note="transcript TVAG_239600A" CDS 282896..284269 /locus_tag="TVAG_239600" /note="encoded by transcript TVAG_239600A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20583.1" /translation="MFLLLLSLRRYNNSNISREIDTKLISMFPECNGRLLTKNLDQNK NLDIFKTLSNDEYLCVYGSLIIGANSSISANVFYPKLDSRLQISITNSTIVDPFVITN KIDTEDIYTAIYDINPLSKVYCSNQLQNCEIQISFIQQPYHISTEITNNGENIKIEDE NVVYISSDDNFSVDENVSLEISKETIKYKTLSVFITGNNKKILKYEKNDNIFDIFTYN IIDKEANPNSILFFTSSKNINSILPAQTPIPSPVPTPIQTPFNTPYQTLSPTLDRYVR VKTFIHIEEGILTETEIIIGVRHAKRLNKAKKLENTIATRIEYHKTHPIIKEVEHLDI YYEDFVLMGNHQAKNDLKIHSEKIEELKETKNYYPNNTTIVLRTNNGAKRLVDLIDVS HPKPTSKPDVDAGVKFPYLIVFLSVFGALIIASTIAIVIVICIRRNHREKTSSDSITC NTSDAYN" gene complement(<286837..>287943) /locus_tag="TVAG_239610" mRNA complement(<286837..>287943) /locus_tag="TVAG_239610" /product="hypothetical protein" /note="transcript TVAG_239610A" CDS complement(286837..287943) /locus_tag="TVAG_239610" /note="encoded by transcript TVAG_239610A" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20584.1" /translation="MADDSLYQLTQLVKHNDYSSDSLNQLYQCISTMTERSIGCLNWD KFFKKITVTDEVLLHFLASVLNIEKISECFKDSIFYHNINLEKFSNLTETEQQTILNS YKADKFTYYIMCSQIVKSNWNNLSQTLVNIANQYLPFLDEEKQIYIFTEITGNYQNFE ISVANLLLFYENDEEKLSNCFNLTLFQQIYSKNGIEQMIFFAANTICCNNTSINFYNL LEIEEMNPFDFFYFSIQYKEILNCDDFPKVTEVITGLISASNINAIMRICQKILGKIT FYKCNYCHITSIWNFITNAAIILPDEDLLIKLLKFIEKTEKATDELFEPENDLGFYEY LNLIFSDITSARNKQFLLEFLNTHEDDFTYDQTL" mobile_element complement(288058..288519) /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" mobile_element complement(288519..289073) /mobile_element_type="transposon:transposon-like, repeat family R8_Tvmar1" gene <290131..>291834 /locus_tag="TVAG_239620" mRNA <290131..>291834 /locus_tag="TVAG_239620" /product="hypothetical protein" /note="transcript TVAG_239620A" CDS 290131..291834 /locus_tag="TVAG_239620" /note="encoded by transcript TVAG_239620A; Identical to: TigrScan, GlimmerHMM gene predictions" /codon_start=1 /product="hypothetical protein" /protein_id="EAY20585.1" /translation="MTELAVGTDENPLIKDSLVREVYNKSRKFSVGEKITDDEIANFC LINGEQFFIGHDFQANCETMFFGFEKAIQFAKEATDLFCDGTFKITPKHFQKGQMLTI MICEPSTNQYLPLLFIFMKNRTFESYKKALEYIFTVKGIQFSKLIQIHCDFEKGMIEA LQQIFPKVRIIGCLFHFKQALHRKLVALYTKNFNTLQNSLFKLYSITPFMSHEEFVLT MHIINQNKVDSIKDYIDYFNKVWLPHYNLISQYNNATAIFTNDCLESMHSEFSSLKHP NIYEAIKKISQIQLDKYNTIKNNQKIERHIKTVITDSYKNYILDCFQKELEKTIFSIK QYNVSDLSLAQNEISPYGSIESSSLFENIPVHDADILKSIDLTDKDTMITKFINEKRE KIMALFNETLNHPDFNSSTPIQTNFEQADTNQGSDAPIRSENSNIADSTDLEPENQNH PSTNQMSSNLEHKLDLLDHIEKQLSKMRSLLGILPTTNAIVGPSKQVSVNSKQNSEKN KKKSSITTKSNNKKQNSSDNPPKRKAPISERILSDNNLYFQVHRKRSKSKRSTSTEKK N" repeat_region 291863..291883 /rpt_type=tandem /rpt_unit_seq="a" /satellite="microsatellite" repeat_region 292151..292789 /note="repeat family R371" CONTIG join(AAHC03005754.1:1..4214,gap(unk100),AAHC03002992.1:1..8538, gap(unk100),complement(AAHC03002886.1:1..8995),gap(unk100), AAHC03000472.1:1..39493,gap(unk100),AAHC03005942.1:1..4075, gap(unk100),AAHC03020084.1:1..1437,gap(unk100), AAHC03006672.1:1..3607,gap(unk100),AAHC03002956.1:1..8668, gap(unk100),AAHC03001109.1:1..24745,gap(unk100), complement(AAHC03002487.1:1..11113),gap(unk100), AAHC03004423.1:1..5536,gap(unk100),AAHC03003049.1:1..8384, gap(unk100),AAHC03002981.1:1..8567,gap(unk100), complement(AAHC03056152.1:1..965),gap(unk100), AAHC03003587.1:1..6916,gap(unk100),AAHC03003732.1:1..6651, gap(unk100),AAHC03005390.1:1..4523,gap(unk100), AAHC03000638.1:1..34269,gap(unk100),AAHC03008106.1:1..2910, gap(unk100),AAHC03001739.1:1..17294,gap(unk100), AAHC03000613.1:1..34828,gap(unk100),AAHC03000329.1:1..45016) //