LOCUS       DQ779181                1015 bp    mRNA    linear   VRT 14-SEP-2006
DEFINITION  Gasterosteus aculeatus Pitx1 splice variant a (Pitx1) mRNA,
            complete cds, alternatively spliced.
ACCESSION   DQ779181
VERSION     DQ779181.1
KEYWORDS    .
SOURCE      Gasterosteus aculeatus (three-spined stickleback)
  ORGANISM  Gasterosteus aculeatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Cottioidei;
            Gasterosteales; Gasterosteidae; Gasterosteus.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Shapiro,M.D., Bell,M.A. and Kingsley,D.M.
  TITLE     Parallel genetic origins of pelvic reduction in vertebrates
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (37), 13753-13758 (2006)
   PUBMED   16945911
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Shapiro,M.D. and Kingsley,D.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUN-2006) Department of Developmental Biology,
            Stanford University School of Medicine, 279 Campus Dr., Stanford,
            CA 94305, USA
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gasterosteus aculeatus"
                     /mol_type="mRNA"
                     /db_xref="taxon:69293"
                     /clone="PB_RTclone21_long"
                     /geo_loc_name="Canada: Paxton Lake (benthic), British
                     Columbia"
     gene            1..1015
                     /gene="Pitx1"
     CDS             107..1009
                     /gene="Pitx1"
                     /note="transcription factor; long variant; alternatively
                     spliced"
                     /codon_start=1
                     /product="Pitx1 splice variant a"
                     /protein_id="ABH01137.1"
                     /translation="MELNLSKNVISGADAGGMNSDRGVEAAAAAAAAPAFHLPRAPRG
                     GRGGVENSSSESSDAEPPEKERGAEPRSDDGTADDPKKKKQRRQRTHFTSQQLQELEA
                     TFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQMDLCKSSYLPQF
                     SGLMQPYEDMYPTYSYNNWPNKGLAPAPLSSKNFTFFNSMSPLTSQSMFSAPSSISSM
                     TMAPGMGPPAAPPGLNNLNGIGASGINSGMSPSACPYGPPGSPYSVYRDTCTLRLKSK
                     QHPSFGYGGLQGPGTSLNACQYNS"
BASE COUNT          200 a          346 c          329 g          140 t
ORIGIN      
        1 cacacgcatg aagtggattt actgaagacc tgcatggggg gaaactctga ggctttatcc
       61 ctgttttctg tcgtctgcct ccgttgggca ccatccggga actggaatgg aactgaatct
      121 gtcgaagaac gtgatttccg gcgcggacgc aggtgggatg aattcggacc ggggcgtcga
      181 ggcggcggcg gcggcggcgg cggcgcccgc gtttcactta ccgagagccc cgcgcggcgg
      241 ccgggggggg gtggagaact ccagcagcga gtcctcggac gcggagccgc cagagaagga
      301 gcgcggcgcg gagccgcgca gcgatgacgg gaccgcggac gacccgaaga agaagaagca
      361 gcggcggcag cgcacgcact tcaccagcca gcagctgcag gagctggagg ccacgttcca
      421 gaggaaccgc tacccggaca tgagcacgcg cgaggagatc gccgtgtgga ccaacctcac
      481 cgaggcccga gtgcgggtgt ggttcaagaa ccgccgggcc aagtggagga agcgcgagcg
      541 caaccagcag atggacctgt gcaagagcag ctacctgccg cagttcagcg ggctgatgca
      601 gccctacgag gacatgtacc ccacctactc ctacaacaac tggcccaaca aggggctggc
      661 ccccgcgccg ctctcctcca agaacttcac cttcttcaac tccatgagcc cgctcacctc
      721 gcagtccatg ttctccgcgc ccagctccat ctcctccatg accatggcgc ccgggatggg
      781 cccccccgcc gcgccgccgg gcctcaacaa cctgaacggc atcggcgcgt ccggcatcaa
      841 ctccggcatg tcgccgtccg cgtgcccgta cgggccgccc ggctctccgt acagcgtcta
      901 ccgggacacg tgcacgctca gactcaagtc caaacagcac ccgagcttcg gctacggcgg
      961 cctgcagggc ccgggcacga gcctgaacgc gtgccagtac aacagctgac gggag
//