LOCUS       DQ302476                1794 bp    DNA     linear   BCT 20-JUN-2006
DEFINITION  Acidobacterium capsulatum major sigma factor RpoD (rpoD) gene,
            complete cds.
ACCESSION   DQ302476
VERSION     DQ302476.1
KEYWORDS    .
SOURCE      Acidobacterium capsulatum
  ORGANISM  Acidobacterium capsulatum
            Bacteria; Acidobacteriota; Terriglobia; Terriglobales;
            Acidobacteriaceae; Acidobacterium.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Sabree,Z.L., Bergendahl,V., Liles,M.R., Burgess,R.R., Goodman,R.M.
            and Handelsman,J.
  TITLE     Identification and characterization of the gene encoding the
            Acidobacterium capsulatum major sigma factor
  JOURNAL   Gene 376 (1), 144-151 (2006)
   PUBMED   16698197
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Sabree,Z.L., Bergendahl,V., Liles,M.R., Burgess,R.R., Goodman,R.M.
            and Handelsman,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2005) Microbiology Doctoral Training
            Program/Plant Pathology, University of Wisconsin Madison, Russell
            Laboratories 1630 Linden Drive, Madison, WI 53706, USA
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Acidobacterium capsulatum"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:33075"
     gene            1..1794
                     /gene="rpoD"
     CDS             1..1794
                     /gene="rpoD"
                     /note="transcriptional regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="major sigma factor RpoD"
                     /protein_id="ABC16653.1"
                     /translation="MRPSSRDFVRNGTCLSWPRSHFVRFNARSDHIRGRRIRLALDDK
                     YEEDLQKLIDAGKEKGYLTYNEVNDLIPGDMTSPEDLDDLMTTIGTQGIDILEGSPKL
                     GNDGFDDEDSDDVELDLTPGTLEKTNDPVRMYLREMGTVPLLTREGEVEIAKRIERGQ
                     LRVMKAVSRSPIVIREIIALGEDLRRGVRSVKEVVIFDEEEITEEVLAARVRQTANKI
                     DGIVKHQKKIQALEEKMQAAKSKVKEQRKLRWLIAREMVFITRIVRDLKYTNQERKRL
                     LDKVNKTVDSMRTLERQIRSLDQKYDQSKSEELKKEYRRQQKNCKTDLEKLEEEAGLS
                     IADLKRTQREIIQGDMDAEQAKRELIEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGL
                     MKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRQL
                     VQELGREPTSEEIARRMDIPVAKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDSQA
                     VSPSEAVISVNLKEYTSQVLRTLTPREERVIKMRFGLEDGSEHTLEEVGQSFQVTRER
                     IRQIEAKALRKLRHPSRSRKLRAFVDNAREM"
BASE COUNT          443 a          544 c          516 g          291 t
ORIGIN      
        1 gtgcgcccat cgtcccgcga ctttgttcgc aatgggacat gcctgtcatg gcctcgatcg
       61 cacttcgtcc gattcaacgc cagatccgac catattcgcg ggagacgaat ccgcttggca
      121 ttagacgata aatacgaaga ggatctgcag aagctcatcg acgccggtaa ggaaaagggc
      181 tatttgacct acaacgaggt caacgacctg atccctggcg acatgacttc tccagaagac
      241 ctggacgacc tgatgacgac catcgggacc cagggaatcg acattcttga aggcagtccc
      301 aagctcggca acgatggctt cgacgacgaa gacagcgacg acgtcgagct tgatcttacc
      361 ccaggaacgc ttgaaaaaac caacgacccc gtgcgcatgt atctgcgcga aatgggcacc
      421 gttccgctgc tcacacgcga aggcgaagta gaaatcgcca agcgcattga acgcggccag
      481 ttgcgcgtga tgaaggctgt ctcgcgctcg cccatcgtga ttcgcgagat catcgcgctc
      541 ggtgaagatc tgcgccgcgg tgtgcgcagc gtcaaggaag tggtgatctt cgacgaagaa
      601 gagatcactg aagaagtact ggccgcccgc gtgcgccaga cggccaacaa gatcgacggc
      661 atcgtcaagc accagaagaa gattcaggcg ctcgaagaga agatgcaggc cgccaagagc
      721 aaggtgaagg agcagcgcaa gctgcgctgg ctcatcgcgc gcgaaatggt cttcatcacg
      781 cgcattgtgc gcgacctgaa gtacaccaat caggagcgca agcgcctgct cgacaaggtc
      841 aacaagaccg tcgattccat gcgcacgctt gagcgccaga ttcgctctct cgaccagaag
      901 tatgaccagt cgaagagcga agagctcaag aaggaatacc gccgccagca gaagaactgc
      961 aagaccgacc tcgaaaagct cgaagaggaa gccggactct ccattgccga cctgaagcgc
     1021 acgcagcgcg agatcattca gggcgacatg gatgccgagc aggccaagcg cgagctgatt
     1081 gaagccaacc tgcgcctggt ggtctcgatt gccaagaagt acaccaatcg cggcctgcag
     1141 ttcctcgatc tgattcagga aggcaacatc ggcctgatga aggccgtgga caagttcgag
     1201 taccgccgcg gttacaagtt ctccacctac gccacctggt ggattcgcca ggccatcacg
     1261 cgcgccatcg ccgatcaggc ccgcaccatc cgtattccgg tgcacatgat tgagacgatc
     1321 aacaagctca tccgcacctc gcgtcaactg gtgcaggagc tgggccgcga acccacctca
     1381 gaggaaattg cccgccgcat ggatattccg gtggccaagg tccgcaaggt gctcaagatt
     1441 gcgcaggagc ccatctccct cgaaacgccg atcggcgaag aggaagattc gcacctgggc
     1501 gacttcattg aggactcgca ggcggtctcg ccttcagagg cggtcatcag cgtgaacctc
     1561 aaggagtaca cctcgcaagt gctgcgcacc ctgacaccgc gcgaagagcg cgtcatcaag
     1621 atgcgcttcg gcctcgaaga cggctcagag cacacgctcg aagaagtagg ccagagcttc
     1681 caggtcaccc gcgagcgcat tcgccagatc gaagccaagg cgctgcgcaa gctgcggcac
     1741 ccctcgcgct cgcgcaagct gcgggccttt gtggacaacg cccgcgaaat gtaa
//