LOCUS       DQ071614                1266 bp    RNA     linear   VRL 25-JAN-2006
DEFINITION  Bat SARS coronavirus Rp2 nucleocapsid protein (N), ORF13 (N), and
            ORF14 (N) genes, complete cds.
ACCESSION   DQ071614
VERSION     DQ071614.1
KEYWORDS    .
SOURCE      Bat SARS coronavirus Rp2
  ORGANISM  Bat SARS coronavirus Rp2
            Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
            Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae;
            Betacoronavirus; Sarbecovirus; Severe acute respiratory
            syndrome-related coronavirus.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Li,W., Shi,Z., Yu,M., Ren,W., Smith,C., Epstein,J.H., Wang,H.,
            Crameri,G., Hu,Z., Zhang,H., Zhang,J., McEachern,J., Field,H.,
            Daszak,P., Eaton,B.T., Zhang,S. and Wang,L.F.
  TITLE     Bats are natural reservoirs of SARS-like coronaviruses
  JOURNAL   Science 310 (5748), 676-679 (2005)
   PUBMED   16195424
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Li,W. and Shi,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAY-2005) Chinese Academy of Science, Wuhan Institute
            of Virology, China
REFERENCE   3  (bases 1 to 1266)
  AUTHORS   Yu,M. and Wang,L.-F.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAY-2005) Australian Animal Health Laboratory, CSIRO,
            Australia
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Bat SARS coronavirus Rp2"
                     /mol_type="genomic RNA"
                     /isolate="Rp2"
                     /host="bat"
                     /db_xref="taxon:349343"
                     /geo_loc_name="China"
     gene            1..1266
                     /gene="N"
     CDS             1..1266
                     /gene="N"
                     /codon_start=1
                     /product="nucleocapsid protein"
                     /protein_id="AAZ67046.1"
                     /translation="MSDNGPQNQRSAPRITFGGPTDSTDNNQDGGRSGARPKQRRPQG
                     LPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGKDDQIGYYRRATRRVRGGDGKMK
                     ELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAAIVLQ
                     LPQGTTLPKGFYAEGSRGGSQASSRSSSRSRGNSRNSTPGSSRGNSPARMASGGGETA
                     LALLLLDRLNQLESKVSGRSQQQQGQTVTKKSAAEASKKPRQKRTATKQYNVTQAFGR
                     RGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYH
                     GAIKLDDKDPQFKDNVILLNKHIDAYKIFPPTEPKKDKKKKTDEAQPLPQRQKKQPTV
                     TLLPAADMDDFSRQLQNSMSGASADSTQA"
     CDS             11..304
                     /codon_start=1
                     /product="ORF13"
                     /protein_id="AAZ67047.1"
                     /translation="MDPKTSVVLPALHLVDPQIQLTTTRMEDAVVHGQNNADLKVYPI
                     ILRLGSQLSLSMVRRNLDSLEVRVFQSTPIVVKMTKLATTEELPDEFVVVTAK"
     CDS             461..673
                     /codon_start=1
                     /product="ORF14"
                     /protein_id="AAZ67048.1"
                     /translation="MLPSCYNFLKEQHCQKASTQKGAEAAVKPLLALHHVVAVIQEIQ
                     LLAAVGEILQLEWLAEAVKLPSRYCC"
BASE COUNT          406 a          320 c          278 g          262 t
ORIGIN      
        1 atgtctgata atggacccca aaaccagcgt agtgctcccc gcattacatt tggtggaccc
       61 acagattcaa ctgacaacaa ccaggatgga ggacgcagtg gtgcacggcc aaaacaacgc
      121 cgacctcaag gtttacccaa taatactgcg tcttggttca cagctctcac tcagcatggt
      181 aaggaggaac ttagattccc tcgaggtcag ggtgttccaa tcaacaccaa tagtggtaaa
      241 gatgaccaaa ttggctacta ccgaagagct acccgacgag ttcgtggtgg tgacggcaaa
      301 atgaaagagc tcagccccag atggtacttc tattacctag gaactggccc agaagcttca
      361 cttccctacg gtgctaacaa agaaggcatc gtatgggttg caactgaggg agccctgaat
      421 acaccaaaag atcacattgg cacccgcaat cctaataaca atgctgccat cgtgctacaa
      481 cttcctcaag gaacaacatt gccaaaaggc ttctacgcag aagggagcag aggcggcagt
      541 caagcctctt ctcgctcttc atcacgtagt cgcggtaatt caagaaattc aactcctggc
      601 agcagtaggg gaaattctcc agctcgaatg gctagcggag gcggtgaaac tgccctcgcg
      661 ctattgctgc tagacagatt gaaccaactt gagagcaaag tttctggtag aagccaacaa
      721 caacaaggcc aaactgtcac taagaaatct gctgctgagg catccaaaaa gcctcgtcaa
      781 aaacgtactg ctacaaaaca gtacaacgtc actcaagcat ttgggagacg tggtccagaa
      841 caaacccaag gaaactttgg ggaccaagaa ttaatcagac aaggaactga ttacaaacat
      901 tggccgcaaa ttgcacaatt tgctccaagt gcctctgcat tcttcggaat gtcacgcatt
      961 ggcatggaag tcacaccttc gggaacatgg ctgacttatc atggagccat taaattggat
     1021 gataaagatc cacaattcaa agacaacgtc atactgctga acaagcacat tgacgcatac
     1081 aaaatattcc caccaacaga gcctaaaaag gacaaaaaga aaaagactga tgaagctcag
     1141 cctttaccgc agagacaaaa gaagcagccc acagtgactc ttcttcctgc agctgatatg
     1201 gatgatttct ccagacaact tcaaaattcc atgagtggag cttctgctga ttcaactcag
     1261 gcataa
//