LOCUS DP000181 2056961 bp DNA linear CON 22-SEP-2006 DEFINITION Dasypus novemcinctus target 1 genomic scaffold. ACCESSION DP000181 VERSION DP000181.1 KEYWORDS . SOURCE Dasypus novemcinctus (nine-banded armadillo) ORGANISM Dasypus novemcinctus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus. REFERENCE 1 (bases 1 to 2056961) AUTHORS Antonellis,A., Ayele,K., Benjamin,B., Blakesley,R.W., Boakye,A., Bouffard,G.G., Brinkley,C., Brooks,S., Chu,G., Coleman,H., Engle,J., Gestole,M., Greene,A., Guan,X., Gupta,J., Haghighi,P., Han,J., Hansen,N., Ho,S.-L., Hu,P., Hunter,G., Hurle,B., Idol,J.R., Kwong,P., Laric,P., Larson,S., Lee-Lin,S.-Q., Legaspi,R., Madden,M., Maduro,Q.L., Maduro,V.B., Margulies,E.H., Masiello,C., Maskeri,B., McDowell,J., Mojidi,H.A., Mullikin,J.C., Oestreicher,J.S., Park,M., Portnoy,M.E., Prasad,A., Puri,O., Reddix-Dugue,N., Schandler,K., Schueler,M.G., Sison,C., Stantripop,S., Stephen,E., Taye,A., Thomas,J.W., Thomas,P.J., Tsipouri,V., Ung,L., Vogt,J.L., Wetherby,K.D., Young,A. and Green,E.D. TITLE NISC Comparative Sequencing Initiative JOURNAL Unpublished REFERENCE 2 (bases 1 to 2056961) AUTHORS Green,E.D. TITLE Direct Submission JOURNAL Submitted (15-SEP-2006) NIH Intramural Sequencing Center, 5625 Fishers Lane, Rockville, MD 20852, USA COMMENT -------------- Genome Center Center: NIH Intramural Sequencing Center Center code: NISC Web site: http://www.nisc.nih.gov Contact: nisc_zoo@nhgri.nih.gov All clones contained in this assembly were sequenced by the NIH Intramural Sequencing Center (NISC). This multi-clone DNA sequence was assembled and annotated by NISC staff. FEATURES Location/Qualifiers source 1..2056961 /organism="Dasypus novemcinctus" /mol_type="genomic DNA" /db_xref="taxon:9361" /clone_lib="VMRC5" /note="target 1" misc_feature 1..103926 /note="fnq; AC146891.3; finished" repeat_region 3..227 /rpt_family="L1M5" repeat_region 623..666 /rpt_family="AT_rich" repeat_region complement(1691..1773) /rpt_family="L1M4" repeat_region complement(2160..2196) /rpt_family="Charlie4" repeat_region 3102..3236 /rpt_family="L1MEc" repeat_region complement(3237..3363) /rpt_family="MLT1C" repeat_region 3681..4271 /rpt_family="L1MEc" repeat_region 4379..4478 /rpt_family="L1MEc" repeat_region 4745..4964 /rpt_family="L1MEc" repeat_region complement(5486..5635) /rpt_family="L2" repeat_region 5642..5664 /rpt_family="AT_rich" repeat_region 5675..5868 /rpt_family="LTR33A" repeat_region 5943..6130 /rpt_family="LTR33A" repeat_region 6334..6356 /rpt_family="AT_rich" repeat_region 6388..6408 /rpt_family="AT_rich" repeat_region 7192..7311 /rpt_family="CT-rich" repeat_region 7882..8038 /rpt_family="MIRb" repeat_region 9555..9590 /rpt_family="AT_rich" repeat_region 11568..11786 /rpt_family="MIRm" repeat_region complement(12019..12519) /rpt_family="L2" repeat_region 13883..13916 /rpt_family="(TAAAAA)n" repeat_region complement(14016..14090) /rpt_family="MLT1J" repeat_region complement(14178..14345) /rpt_family="MLT1J" repeat_region complement(14953..15097) /rpt_family="MIRb" repeat_region 15392..15577 /rpt_family="MLT1A" repeat_region 15608..15619 /rpt_family="MER3" repeat_region complement(15620..15827) /rpt_family="MER3" repeat_region 16122..16204 /rpt_family="Charlie10" repeat_region 16894..16915 /rpt_family="AT_rich" repeat_region 18216..18258 /rpt_family="L3" repeat_region 18719..18859 /rpt_family="MIR3" repeat_region 18897..19392 /rpt_family="L3" repeat_region 19445..19652 /rpt_family="MER63A" repeat_region complement(22329..22418) /rpt_family="MLT1C" repeat_region 24711..24743 /rpt_family="AT_rich" repeat_region complement(25754..26444) /rpt_family="L1ME2" repeat_region 27266..27297 /rpt_family="AT_rich" repeat_region 27793..28202 /rpt_family="MLT1B-int" repeat_region 28252..28456 /rpt_family="MLT1B-int" repeat_region 28709..29080 /rpt_family="MLT1B-int" repeat_region 29393..29534 /rpt_family="MLT1C" repeat_region complement(29951..30193) /rpt_family="HAL1" repeat_region 30761..30814 /rpt_family="AT_rich" repeat_region 31021..31421 /rpt_family="MLT1B" repeat_region complement(31915..32061) /rpt_family="MIRb" repeat_region complement(32516..32630) /rpt_family="L2" repeat_region 32657..32694 /rpt_family="AT_rich" repeat_region 33884..33919 /rpt_family="AT_rich" repeat_region 34103..34145 /rpt_family="AT_rich" repeat_region 34263..34659 /rpt_family="MLT2C1" repeat_region 34660..34697 /rpt_family="(TAGA)n" repeat_region 34698..34752 /rpt_family="MLT2C1" repeat_region 34925..35338 /rpt_family="L2" repeat_region complement(35394..35719) /rpt_family="L2" repeat_region 36514..36555 /rpt_family="AT_rich" repeat_region complement(36943..37404) /rpt_family="L1MC5" repeat_region complement(37352..37523) /rpt_family="L1MC4a" repeat_region 37595..38091 /rpt_family="MLT1D" repeat_region 38784..40392 /rpt_family="L1M4" repeat_region 40441..41372 /rpt_family="L1M4" repeat_region complement(41373..41580) /rpt_family="MLT1C" repeat_region complement(41580..41669) /rpt_family="MLT1C" repeat_region 41670..42093 /rpt_family="L1M4" repeat_region complement(42231..42317) /rpt_family="L2" repeat_region 42542..42578 /rpt_family="AT_rich" repeat_region 42682..42764 /rpt_family="MIRb" repeat_region 43680..43809 /rpt_family="CT-rich" repeat_region complement(43831..44047) /rpt_family="L1ME3B" repeat_region complement(44282..44600) /rpt_family="L1MC4a" repeat_region 45173..45524 /rpt_family="L1MC2" repeat_region complement(45538..45718) /rpt_family="L1MC4a" repeat_region complement(45960..46090) /rpt_family="L1M3" repeat_region complement(46093..46157) /rpt_family="L1ME3B" repeat_region complement(47740..48155) /rpt_family="MLT1B" repeat_region 49027..49091 /rpt_family="(GA)n" repeat_region 49868..50242 /rpt_family="MLT1G1" repeat_region 50211..50378 /rpt_family="MLT1G1" repeat_region 50383..50445 /rpt_family="MLT1H-int" repeat_region 50597..50618 /rpt_family="AT_rich" repeat_region 50701..50746 /rpt_family="(TTTG)n" repeat_region complement(50815..51456) /rpt_family="L1MC4" repeat_region 52361..52485 /rpt_family="MER3" repeat_region 54154..54206 /rpt_family="L2" repeat_region complement(54223..54291) /rpt_family="tRNA-Ala-GCA" repeat_region 54298..54685 /rpt_family="L2" repeat_region 55755..55858 /rpt_family="MIR3" repeat_region 55985..56005 /rpt_family="AT_rich" repeat_region 56025..56090 /rpt_family="Charlie4" gene 56823..99090 /gene="TES" mRNA join(56823..56999,78687..78772,89967..90219,91106..91441, 92761..92976,93386..93544,97814..99090) /gene="TES" /product="testis derived transcript" CDS join(56973..56999,78687..78772,89967..90219,91106..91441, 92761..92976,93386..93544,97814..98002) /gene="TES" /note="testin; based on human NCBI RefSeq Accession Number NM_015641.2" /codon_start=1 /product="testis derived transcript" /protein_id="ABI93625.1" /translation="MDLEAKVKKMGLGHEQGFGAPCLKCKEKCEGFELHFWRKICRNC KCGQEEHDVLLSSEEDRKVGKLFEDTKYTTLIAKLKSDGIPMYKRNVMILTNPVPAKK NVSINTVTYEWAPPVQNQALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLPEHDQD PSKCHELSPKEVKEMEQFVKKYKNEALGVGDVKLPSEMDAQAPNRICIPGGDRSTTAA VGAMEAKSGEHRRTQYSCYGCKLSMKEGDPAVYAERAGYNKLWHPACFICSTCCELLV DMIYFWKNGKLYCGRHYCDSEKPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDNI LAGEIYVMVNEKPVCKPCYVKNHAVVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCS CCSKCLIGQKFMPVEGMVFCSVECKKMMS" repeat_region complement(58180..58275) /rpt_family="L1MB7" repeat_region 60029..60058 /gene="TES" /rpt_family="(T)n" repeat_region complement(61058..61146) /rpt_family="MIRb" repeat_region 61848..61868 /gene="TES" /rpt_family="AT_rich" repeat_region 62315..62457 /gene="TES" /rpt_family="MIR3" repeat_region 62559..62636 /gene="TES" /rpt_family="(TA)n" repeat_region complement(62859..63017) /rpt_family="L2" repeat_region 64955..65016 /gene="TES" /rpt_family="tRNA-Ala-GCG" repeat_region complement(65043..65278) /rpt_family="MER5C" repeat_region complement(66271..66369) /rpt_family="L2" repeat_region 66648..66866 /gene="TES" /rpt_family="MIR" repeat_region 67286..67783 /gene="TES" /rpt_family="MLT1H" repeat_region 69330..69753 /gene="TES" /rpt_family="MLT1F2" repeat_region 70297..70491 /gene="TES" /rpt_family="MIRb" repeat_region 71250..71435 /gene="TES" /rpt_family="MIR" repeat_region complement(71559..71912) /rpt_family="L2" repeat_region complement(72467..72636) /rpt_family="L1MB4" repeat_region complement(74437..74597) /rpt_family="MIR3" repeat_region 76266..76302 /gene="TES" /rpt_family="(A)n" repeat_region 76334..76529 /gene="TES" /rpt_family="L2" repeat_region 76700..76833 /gene="TES" /rpt_family="MIR" repeat_region 78405..78505 /gene="TES" /rpt_family="MIRb" repeat_region 78606..78660 /gene="TES" /rpt_family="AT_rich" repeat_region 79264..79293 /gene="TES" /rpt_family="AT_rich" repeat_region complement(81038..81477) /rpt_family="LTR33" repeat_region complement(81717..81965) /rpt_family="MLT1E2" repeat_region complement(81993..82042) /rpt_family="MLT1E3" repeat_region complement(82043..82194) /rpt_family="MIRb" repeat_region 83999..84032 /gene="TES" /rpt_family="AT_rich" misc_feature 85257..85273 /gene="TES" /note="single clone coverage" repeat_region 85816..85872 /gene="TES" /rpt_family="AT_rich" repeat_region complement(85963..86471) /rpt_family="L1M5" repeat_region complement(86478..86673) /rpt_family="L1M5" repeat_region complement(86676..87676) /rpt_family="L1MEc" repeat_region complement(87694..87757) /rpt_family="tRNA-Ala-GCA" repeat_region complement(87765..87948) /rpt_family="L1MEc" repeat_region 87950..87971 /gene="TES" /rpt_family="AT_rich" repeat_region 87993..88017 /gene="TES" /rpt_family="(C)n" misc_feature 88011 /gene="TES" /note="low quality single stranded/single chemistry region" repeat_region complement(88379..88793) /rpt_family="L1MCa" repeat_region complement(88830..89018) /rpt_family="MLT1B" repeat_region complement(89287..89421) /rpt_family="L1M5" repeat_region 89434..89507 /gene="TES" /rpt_family="GA-rich" repeat_region 92173..92207 /gene="TES" /rpt_family="AT_rich" repeat_region 94457..94730 /gene="TES" /rpt_family="L2" repeat_region 95293..95313 /gene="TES" /rpt_family="(TA)n" repeat_region 95594..95698 /gene="TES" /rpt_family="L2" repeat_region 96578..96616 /gene="TES" /rpt_family="AT_rich" repeat_region 97516..97548 /gene="TES" /rpt_family="(TG)n" repeat_region 98066..98089 /gene="TES" /rpt_family="AT_rich" repeat_region 99687..99719 /rpt_family="(CA)n" repeat_region complement(100737..100776) /rpt_family="L2" repeat_region 101443..101471 /rpt_family="AT_rich" repeat_region complement(102378..103024) /rpt_family="L2" repeat_region complement(103129..103425) /rpt_family="MLT1L" repeat_region complement(103550..103765) /rpt_family="MLT1C" repeat_region complement(103847..103973) /rpt_family="MLT1C" misc_feature 103927..211966 /note="fag; AC145363.4; finished" repeat_region complement(104201..104333) /rpt_family="MER5A" repeat_region 104642..104783 /rpt_family="MLT1C" repeat_region 105562..105584 /rpt_family="(TTCA)n" repeat_region complement(105586..105718) /rpt_family="L2" repeat_region complement(105748..105872) /rpt_family="L4" repeat_region 105975..106218 /rpt_family="L4" repeat_region 106889..106989 /rpt_family="MLT1J2" repeat_region 107073..107153 /rpt_family="MLT1J2" repeat_region complement(107176..107337) /rpt_family="L2" repeat_region 107415..107656 /rpt_family="L1MC4" repeat_region 107871..107982 /rpt_family="MIRb" repeat_region 108110..108475 /rpt_family="MLT1G3" repeat_region complement(109032..109163) /rpt_family="L2" repeat_region complement(109419..109493) /rpt_family="MIR" repeat_region complement(112826..113155) /rpt_family="L2" repeat_region 113332..113469 /rpt_family="MER103" repeat_region 113791..114114 /rpt_family="L1MC4" repeat_region 114120..114199 /rpt_family="L1MC4" repeat_region 114253..114372 /rpt_family="L1MC4" repeat_region complement(114413..114616) /rpt_family="L2" repeat_region 115567..115701 /rpt_family="MIR" repeat_region complement(116094..116434) /rpt_family="L1MC2" repeat_region 117836..117977 /rpt_family="L1ME2" repeat_region complement(118009..118674) /rpt_family="L1M3" repeat_region complement(118692..119261) /rpt_family="L1M4" repeat_region 119262..119499 /rpt_family="L1MC2" repeat_region complement(119520..120816) /rpt_family="L1M4" repeat_region 121208..121340 /rpt_family="MLT1J2" repeat_region 121665..121712 /rpt_family="AT_rich" repeat_region 121788..121818 /rpt_family="AT_rich" repeat_region 122491..122595 /rpt_family="MIR3" repeat_region complement(122681..123044) /rpt_family="L2" repeat_region 123124..123161 /rpt_family="AT_rich" repeat_region complement(123167..123566) /rpt_family="MLT1B" repeat_region complement(124656..124711) /rpt_family="L1M5" repeat_region 125673..125704 /rpt_family="(TTG)n" repeat_region complement(125985..126114) /rpt_family="L1M5" repeat_region 126145..126165 /rpt_family="AT_rich" repeat_region 126202..126226 /rpt_family="AT_rich" repeat_region complement(126317..128282) /rpt_family="L2" misc_feature 127148..127175 /note="single clone coverage" repeat_region 127431..127597 /rpt_family="MER5B" repeat_region complement(128374..128714) /rpt_family="MLT1J" repeat_region 128987..129012 /rpt_family="AT_rich" repeat_region complement(129764..130208) /rpt_family="L1M5" repeat_region 130511..130582 /rpt_family="Arthur1" repeat_region 130595..130786 /rpt_family="Arthur1" repeat_region 130800..131198 /rpt_family="L1M4c" repeat_region 132333..132372 /rpt_family="AT_rich" repeat_region 132423..132685 /rpt_family="L1ME4a" repeat_region complement(133430..133629) /rpt_family="MIRb" repeat_region complement(134296..134444) /rpt_family="MIR" repeat_region 135617..135728 /rpt_family="L2" repeat_region 137430..137527 /rpt_family="L2" repeat_region 137621..137839 /rpt_family="MER20" repeat_region 138252..138278 /rpt_family="AT_rich" repeat_region complement(138416..139282) /rpt_family="L2" repeat_region complement(139301..139348) /rpt_family="L2" repeat_region 139351..139829 /rpt_family="MLT1C" repeat_region 140702..140840 /rpt_family="MIR3" repeat_region complement(142038..142307) /rpt_family="MLT1J2" repeat_region 142603..143541 /rpt_family="L2" repeat_region 143879..144417 /rpt_family="L1ME3A" repeat_region 145122..145153 /rpt_family="(TTTG)n" repeat_region 145361..145391 /rpt_family="(TTTTC)n" repeat_region 145569..145760 /rpt_family="MLT1C" repeat_region complement(145762..145905) /rpt_family="L1MEc" repeat_region 146076..146099 /rpt_family="AT_rich" repeat_region complement(146910..147435) /rpt_family="ERVL-E" repeat_region complement(147446..147591) /rpt_family="LTR67" repeat_region 148075..148096 /rpt_family="AT_rich" repeat_region 148324..148351 /rpt_family="AT_rich" repeat_region 148619..148823 /rpt_family="L3b" repeat_region 149155..149202 /rpt_family="AT_rich" repeat_region complement(149428..149474) /rpt_family="L2" repeat_region complement(149599..149807) /rpt_family="MIRb" repeat_region 149956..150137 /rpt_family="G-rich" repeat_region 150634..150669 /rpt_family="(TAAAAA)n" repeat_region 153674..153756 /rpt_family="(TA)n" repeat_region complement(153800..153854) /rpt_family="tRNA-Ala-GCG" repeat_region 153867..153909 /rpt_family="T-rich" repeat_region complement(154017..154093) /rpt_family="L2" repeat_region 154384..155793 /rpt_family="Cheshire" repeat_region 156779..156810 /rpt_family="(G)n" repeat_region 156861..156885 /rpt_family="(A)n" repeat_region 157150..157211 /rpt_family="(TAAA)n" repeat_region 157647..157918 /rpt_family="L1ME4a" repeat_region 158360..158505 /rpt_family="L1MEc" repeat_region 159831..160814 /rpt_family="L1M5" repeat_region 160840..161133 /rpt_family="L1M5" repeat_region 161137..161858 /rpt_family="L1M5" repeat_region 162228..162363 /rpt_family="L1MC3" repeat_region 162394..162486 /rpt_family="L1MC2" repeat_region 162595..162619 /rpt_family="AT_rich" repeat_region 162879..162903 /rpt_family="AT_rich" repeat_region 163048..163207 /rpt_family="L1MEc" repeat_region complement(163552..164242) /rpt_family="L2" repeat_region complement(164243..164506) /rpt_family="L2" repeat_region complement(165367..165520) /rpt_family="MIR" repeat_region complement(166315..166384) /rpt_family="tRNA-Ala-GCG" repeat_region 166397..166439 /rpt_family="(TTTG)n" repeat_region complement(167101..167205) /rpt_family="L3" repeat_region 167915..167945 /rpt_family="AT_rich" repeat_region complement(169014..169119) /rpt_family="MER121" repeat_region complement(169532..169656) /rpt_family="L2" repeat_region complement(169992..170573) /rpt_family="MLT1E" repeat_region 172053..172404 /rpt_family="L1M5" repeat_region 172812..172838 /rpt_family="AT_rich" repeat_region complement(173063..173448) /rpt_family="ERVL-D" repeat_region complement(173453..173831) /rpt_family="ERVL-D" repeat_region 173833..173906 /rpt_family="T-rich" repeat_region complement(174289..175152) /rpt_family="ERVL-D" repeat_region complement(175154..175608) /rpt_family="MLT2D" repeat_region complement(175759..175851) /rpt_family="MLT1C" repeat_region complement(176199..176405) /rpt_family="MER53" repeat_region 178769..178799 /rpt_family="AT_rich" repeat_region 181071..181130 /rpt_family="tRNA-Ala-GCA" repeat_region 181228..181277 /rpt_family="T-rich" repeat_region complement(181458..181818) /rpt_family="HAL1b" repeat_region 181940..182994 /rpt_family="L1MB4" repeat_region 183015..187034 /rpt_family="L1MB4" repeat_region 187484..187849 /rpt_family="L1MC2" repeat_region 187927..188015 /rpt_family="AT_rich" repeat_region 189267..189632 /rpt_family="L1MC2" repeat_region 189732..190215 /rpt_family="LTR40a" repeat_region 190826..190958 /rpt_family="MLT1C" repeat_region complement(190959..191215) /rpt_family="MLT1J1" repeat_region 193190..193340 /rpt_family="MIRb" repeat_region complement(196102..196220) /rpt_family="MER94" repeat_region 196521..196712 /rpt_family="MER20" repeat_region 199066..199535 /rpt_family="L2" repeat_region 199832..199881 /rpt_family="GA-rich" repeat_region 202093..202218 /rpt_family="MER5B" repeat_region complement(202686..203094) /rpt_family="MLT1C" repeat_region 203654..203699 /rpt_family="(T)n" repeat_region 206421..206539 /rpt_family="MER94" repeat_region 208199..208222 /rpt_family="AT_rich" repeat_region complement(209033..209193) /rpt_family="L1M5" repeat_region 209392..209431 /rpt_family="C-rich" repeat_region complement(209823..210341) /rpt_family="L1M5" repeat_region complement(210341..210494) /rpt_family="L1MEe" repeat_region complement(211227..211411) /rpt_family="L1MEe" misc_feature 211967..323177 /note="fah; AC145418.5; finished" repeat_region complement(212136..212197) /rpt_family="tRNA-Ala-GCY_" repeat_region 213738..213761 /rpt_family="AT_rich" repeat_region complement(214450..215919) /rpt_family="L1MB4" repeat_region complement(215920..217795) /rpt_family="L1MEe" repeat_region complement(218394..219361) /rpt_family="L1MB4" repeat_region 221677..221722 /rpt_family="(TTTA)n" repeat_region 222983..223026 /rpt_family="AT_rich" repeat_region 223200..223432 /rpt_family="MIR" repeat_region 224544..224580 /rpt_family="T-rich" repeat_region 227254..227321 /rpt_family="MER5A" repeat_region complement(227332..227425) /rpt_family="MLT1C" repeat_region 227533..228600 /rpt_family="L2" repeat_region 230888..230923 /rpt_family="(TTTTTA)n" repeat_region complement(231905..232393) /rpt_family="MER68" repeat_region 232858..232893 /rpt_family="(TA)n" repeat_region 234016..234046 /rpt_family="AT_rich" repeat_region complement(234278..234514) /rpt_family="MLT1J" repeat_region complement(235126..235412) /rpt_family="MIR" repeat_region 235458..235551 /rpt_family="MIRb" repeat_region 235995..236345 /rpt_family="L1MC2" repeat_region 237837..237858 /rpt_family="AT_rich" repeat_region 238700..238941 /rpt_family="MIR" repeat_region complement(239161..239331) /rpt_family="MER117" repeat_region 239573..240171 /rpt_family="MLT1E1" repeat_region complement(240807..240968) /rpt_family="L3" repeat_region complement(242022..242311) /rpt_family="L1MC2" repeat_region complement(242312..242392) /rpt_family="MIRb" repeat_region 242400..242541 /rpt_family="MIRb" repeat_region complement(242919..243026) /rpt_family="MIRm" repeat_region 243761..243841 /rpt_family="MER91C" repeat_region 244416..244446 /rpt_family="(CA)n" repeat_region complement(244865..244963) /rpt_family="MIRb" repeat_region 245025..245052 /rpt_family="AT_rich" repeat_region 245425..245498 /rpt_family="CT-rich" repeat_region complement(246620..246746) /rpt_family="L2" repeat_region complement(248652..248882) /rpt_family="MLT1D" repeat_region 248888..249112 /rpt_family="MLT1C" repeat_region 249493..249524 /rpt_family="G-rich" repeat_region 249534..249562 /rpt_family="AT_rich" repeat_region complement(249629..249705) /rpt_family="MLT1B" repeat_region 249706..249734 /rpt_family="(TTTTG)n" repeat_region 250172..250314 /rpt_family="MLT1C" repeat_region complement(250320..250393) /rpt_family="MLT1D" repeat_region 250921..250946 /rpt_family="AT_rich" repeat_region complement(251623..251863) /rpt_family="MIR" repeat_region complement(253212..253332) /rpt_family="L1ME4a" repeat_region complement(255176..255494) /rpt_family="MLT1L" repeat_region complement(255495..255660) /rpt_family="MER58A" repeat_region 255830..255857 /rpt_family="AT_rich" repeat_region 256564..256584 /rpt_family="AT_rich" repeat_region 258151..258193 /rpt_family="MIRb" repeat_region 259065..259189 /rpt_family="MLT1C" repeat_region complement(259184..259425) /rpt_family="MLT1L" repeat_region complement(259456..260005) /rpt_family="MLT1H" repeat_region complement(260556..260767) /rpt_family="MIRb" repeat_region 261138..261523 /rpt_family="MLT1J2" repeat_region 261761..262102 /rpt_family="MLT1J2-int" repeat_region 262188..262322 /rpt_family="MLT1J2-int" repeat_region 262624..262981 /rpt_family="MLT1J2-int" repeat_region 263321..263429 /rpt_family="MLT1C" repeat_region 263441..263583 /rpt_family="MLT1B" repeat_region 263659..263764 /rpt_family="MLT1B" repeat_region complement(263829..263982) /rpt_family="L1M5" repeat_region 264148..264199 /rpt_family="(TATAA)n" repeat_region 267049..267068 /rpt_family="(TGGGGG)n" repeat_region 267524..267552 /rpt_family="AT_rich" repeat_region complement(270588..270741) /rpt_family="MIR3" repeat_region 272306..272344 /rpt_family="(TA)n" repeat_region 274484..274756 /rpt_family="L1MC2" repeat_region 274776..274822 /rpt_family="AT_rich" repeat_region 276118..277186 /rpt_family="L1M5" repeat_region 277224..277308 /rpt_family="L1M3" repeat_region 277312..277522 /rpt_family="L1MC1" repeat_region 277570..278168 /rpt_family="L1M5" repeat_region 278766..278795 /rpt_family="AT_rich" repeat_region 279232..279266 /rpt_family="AT_rich" repeat_region 279328..279406 /rpt_family="MIR" repeat_region 279483..279671 /rpt_family="L1M5" repeat_region 279849..279963 /rpt_family="L1ME3" repeat_region 281403..281435 /rpt_family="G-rich" repeat_region 281489..281525 /rpt_family="(A)n" repeat_region 281526..281695 /rpt_family="L1ME3" repeat_region 282104..282161 /rpt_family="(TAAA)n" repeat_region 282179..282423 /rpt_family="L1ME3" repeat_region 283091..283411 /rpt_family="MLT1K" repeat_region complement(283661..283754) /rpt_family="L1MC2" repeat_region complement(283855..283957) /rpt_family="L1MC1" repeat_region complement(284397..285084) /rpt_family="L1M4" repeat_region complement(285131..286122) /rpt_family="L1M4c" repeat_region complement(287134..287316) /rpt_family="MIR" repeat_region 287459..287483 /rpt_family="AT_rich" repeat_region complement(287684..288071) /rpt_family="L1MB4" repeat_region complement(288138..288767) /rpt_family="L1ME1" repeat_region 289443..289462 /rpt_family="(TTTA)n" repeat_region complement(290492..290580) /rpt_family="MLT1C" repeat_region 290982..291137 /rpt_family="L2" repeat_region complement(292120..292199) /rpt_family="L2" repeat_region complement(292814..293462) /rpt_family="L2" repeat_region 294276..294298 /rpt_family="AT_rich" repeat_region complement(295116..296109) /rpt_family="L1M4" repeat_region complement(298271..298576) /rpt_family="L2" repeat_region 298613..298632 /rpt_family="(T)n" repeat_region 298681..298703 /rpt_family="AT_rich" repeat_region 299438..299459 /rpt_family="AT_rich" repeat_region 300002..300071 /rpt_family="tRNA-Ala-GCA" repeat_region 300396..300485 /rpt_family="MLT1K" repeat_region 300535..300738 /rpt_family="MIR" repeat_region 300739..300771 /rpt_family="(TA)n" repeat_region 300772..300823 /rpt_family="MIR" repeat_region 301605..301742 /rpt_family="T-rich" repeat_region 301755..301928 /rpt_family="T-rich" repeat_region 301946..302094 /rpt_family="T-rich" repeat_region 302262..302929 /rpt_family="L1M4c" repeat_region 302943..303119 /rpt_family="L1M4c" repeat_region 303256..303295 /rpt_family="AT_rich" repeat_region 303648..305597 /rpt_family="L1M4c" repeat_region complement(305679..305780) /rpt_family="L2" repeat_region complement(306607..306699) /rpt_family="L3" repeat_region complement(306747..306801) /rpt_family="MIRm" repeat_region 306874..306899 /rpt_family="polypurine" repeat_region 306900..307079 /rpt_family="(GGAA)n" repeat_region 307080..307119 /rpt_family="polypurine" repeat_region 307120..307299 /rpt_family="(GAAA)n" repeat_region complement(307549..307810) /rpt_family="MIR" repeat_region complement(308964..309173) /rpt_family="MER3" repeat_region 311159..311314 /rpt_family="MIR" repeat_region 311455..311901 /rpt_family="MLT2C1" repeat_region 312053..312245 /rpt_family="MER3" repeat_region 312584..313602 /rpt_family="L1MEb" repeat_region 314642..314673 /rpt_family="AT_rich" repeat_region 314972..315150 /rpt_family="T-rich" repeat_region 315540..316508 /rpt_family="L1MB4" repeat_region 316499..319746 /rpt_family="L1MB4" repeat_region 319957..320649 /rpt_family="L1MB4" repeat_region 321119..321153 /rpt_family="AT_rich" misc_feature 321138..321314 /note="single clone coverage" repeat_region 321557..321917 /rpt_family="L1MC2" repeat_region 322010..322047 /rpt_family="AT_rich" misc_feature 323178..413695 /note="fai; AC145507.3; finished" repeat_region 323406..323762 /rpt_family="L1MC2" repeat_region 323807..323863 /rpt_family="(TATAA)n" repeat_region 323869..324013 /rpt_family="L1MEb" repeat_region 324996..326532 /rpt_family="L1MC4" repeat_region 327729..327752 /rpt_family="AT_rich" repeat_region 329524..329689 /rpt_family="MER69A" repeat_region complement(330454..330680) /rpt_family="MIRb" repeat_region 331738..331912 /rpt_family="HAL1b" repeat_region 331949..332198 /rpt_family="HAL1" repeat_region 333702..334523 /rpt_family="L2" repeat_region 334539..334601 /rpt_family="MLT1J" repeat_region 334601..334866 /rpt_family="MLT1I" repeat_region 334867..335791 /rpt_family="L2" repeat_region complement(338070..338518) /rpt_family="L2" repeat_region 338821..338974 /rpt_family="L1M5" repeat_region 339265..339601 /rpt_family="L1MD" repeat_region 339879..339914 /rpt_family="(TAAA)n" repeat_region 339915..340067 /rpt_family="L1M5" repeat_region 340070..340449 /rpt_family="L1MC2" repeat_region 340456..340624 /rpt_family="L1M5" repeat_region 340610..340912 /rpt_family="L1M5" repeat_region 342323..342613 /rpt_family="L1MC2" repeat_region 342657..342697 /rpt_family="AT_rich" repeat_region 343234..343409 /rpt_family="L1MB4" repeat_region 343419..343580 /rpt_family="L1MC2" repeat_region 343887..343922 /rpt_family="AT_rich" repeat_region 345488..345543 /rpt_family="AT_rich" repeat_region 346244..346422 /rpt_family="L1MC2" repeat_region 347003..347383 /rpt_family="L1MC2" repeat_region 347387..347437 /rpt_family="A-rich" repeat_region 349063..349088 /rpt_family="AT_rich" repeat_region 349327..349356 /rpt_family="AT_rich" repeat_region complement(349896..349912) /rpt_family="L1MA10" repeat_region complement(349913..350141) /rpt_family="L1ME2" repeat_region complement(350160..350436) /rpt_family="L1ME2" repeat_region complement(350461..351583) /rpt_family="L1ME2" repeat_region complement(351947..352182) /rpt_family="L1ME2" repeat_region 353114..353141 /rpt_family="(TGGGGG)n" repeat_region 353152..353181 /rpt_family="AT_rich" repeat_region 353319..353358 /rpt_family="AT_rich" repeat_region 355042..355099 /rpt_family="CT-rich" repeat_region 355703..356096 /rpt_family="LTR16B" repeat_region complement(356187..356665) /rpt_family="MLT1D" repeat_region complement(356848..356924) /rpt_family="MIR" repeat_region complement(356919..357006) /rpt_family="L2" repeat_region 357040..357349 /rpt_family="L1ME2" repeat_region complement(357936..358220) /rpt_family="L3" repeat_region 358551..358570 /rpt_family="(TTTA)n" repeat_region 359132..359165 /rpt_family="(TG)n" repeat_region 359534..359719 /rpt_family="LTR33" repeat_region 359819..359897 /rpt_family="LTR33" repeat_region complement(361165..361471) /rpt_family="Charlie2" repeat_region complement(362574..362688) /rpt_family="Charlie2" repeat_region 362762..362796 /rpt_family="(CTCA)n" repeat_region complement(362800..363051) /rpt_family="Charlie2" repeat_region 363325..363862 /rpt_family="L1MC4" repeat_region 363567..364050 /rpt_family="L1MB8" repeat_region complement(364896..365185) /rpt_family="L1MC2" repeat_region 365403..365552 /rpt_family="MIRb" repeat_region 365801..365841 /rpt_family="AT_rich" repeat_region 366109..366180 /rpt_family="MER94" repeat_region complement(366853..367090) /rpt_family="HAL1" repeat_region complement(367360..367516) /rpt_family="MIR" repeat_region 367667..368089 /rpt_family="L3" repeat_region complement(368110..368658) /rpt_family="L2" repeat_region 369146..369361 /rpt_family="L1MCc" repeat_region 369365..369582 /rpt_family="L1MCc" repeat_region 369583..369783 /rpt_family="L1MCc" repeat_region 369798..370528 /rpt_family="L1MCc" repeat_region complement(370539..370870) /rpt_family="L1MC2" repeat_region 372143..372235 /rpt_family="AT_rich" repeat_region complement(372342..372713) /rpt_family="L1MC2" repeat_region 373337..374021 /rpt_family="L1MB4" repeat_region 374022..374129 /rpt_family="L1MCc" repeat_region 374158..375349 /rpt_family="L1ME3A" repeat_region complement(375441..375766) /rpt_family="L2" repeat_region 375763..376332 /rpt_family="L3" repeat_region 376400..376689 /rpt_family="L1MC1" repeat_region 376694..376746 /rpt_family="AT_rich" repeat_region 376776..376996 /rpt_family="L3" repeat_region 377032..377100 /rpt_family="GA-rich" repeat_region 379746..380059 /rpt_family="L1MC2" repeat_region 381453..381667 /rpt_family="MER20" repeat_region complement(382571..382699) /rpt_family="MLT1C" repeat_region 384248..384283 /rpt_family="AT_rich" repeat_region complement(384494..384722) /rpt_family="MIR" gene 384726..392391 /gene="CAV2" mRNA join(384726..385333,385650..385837,390136..392391) /gene="CAV2" /product="caveolin 2" repeat_region 384995..385044 /gene="CAV2" /rpt_family="GC_rich" repeat_region 385083..385183 /gene="CAV2" /rpt_family="GC_rich" CDS join(385184..385333,385650..385837,390136..390286) /gene="CAV2" /note="caveolae protein, 20kD; alpha isoform; based on human NCBI RefSeq Accession Number NM_001233.3 and TIGR THC642455" /codon_start=1 /product="caveolin 2" /protein_id="ABI93626.1" /translation="MGLETEKADVQLFVDDDVYSRHSGVDYGDSEKFTDLGVDRDPRR LNSHLQLGFEDVIAEPVSTHSLDKVWICSHALFEISKYIIYKFLTVFLAIPLAFAAGI LFATLSCLHIWITMPFVKTCLMVLPSVQTIWKSVTDVAIAPLCTSVGRSFSSVSLQLS HD" repeat_region 387801..387825 /gene="CAV2" /rpt_family="(T)n" repeat_region complement(391820..392008) /rpt_family="MARNA" repeat_region 392480..392501 /rpt_family="AT_rich" repeat_region 393006..393196 /rpt_family="MIR3" repeat_region 393489..393826 /rpt_family="L2" repeat_region complement(396177..396279) /rpt_family="MIR" repeat_region complement(397007..397171) /rpt_family="L1M5" repeat_region complement(399561..399716) /rpt_family="MER5A1" repeat_region complement(400853..401305) /rpt_family="MLT2D" repeat_region 402618..402711 /rpt_family="MLT1H" repeat_region 402736..402767 /rpt_family="AT_rich" repeat_region 403199..403243 /rpt_family="AT_rich" repeat_region complement(405346..405427) /rpt_family="MIR" repeat_region 406382..406449 /rpt_family="tRNA-Ala-GCA" repeat_region 406473..406544 /rpt_family="MIR3" repeat_region complement(408294..408363) /rpt_family="tRNA-Ala-GCY_" gene 409197..446510 /gene="CAV1" mRNA join(409197..409509,410886..411050,444284..446510) /gene="CAV1" /product="caveolin 1" CDS join(409480..409509,410886..411050,444284..444625) /gene="CAV1" /note="caveolae protein, 22kD; alpha isoform; based on human NCBI RefSeq Accession Number NM_001753.3" /codon_start=1 /product="caveolin 1" /protein_id="ABI93627.1" /translation="MSGGKYVDSEGHLYTAPIREQGNIYKPNNKAMAEEMNEKQVYDA HTKEIDLVNRDPKHLNDDVVKIDFEDVIAEPEGTHSFDGIWKASFTTFTVTKYWFYRL LSTLFGIPMALIWGIYFAILSFLHIWAVVPCIKSFLIEIQCIGRVYSIYIHTFCDPLF EAVGKLFSNIRINMQKEI" repeat_region complement(413344..413542) /rpt_family="MER3" misc_feature 413696..438106 /gene="CAV1" /note="iwn; AC156759.3; finished" repeat_region 415436..415483 /gene="CAV1" /rpt_family="(TTATA)n" repeat_region complement(415772..416095) /rpt_family="L2" repeat_region 417508..417528 /gene="CAV1" /rpt_family="AT_rich" repeat_region 417533..417554 /gene="CAV1" /rpt_family="(A)n" repeat_region 418017..418141 /gene="CAV1" /rpt_family="L1MB8" repeat_region 418180..418261 /gene="CAV1" /rpt_family="MIR" repeat_region complement(418292..418392) /rpt_family="L2" repeat_region complement(418740..418862) /rpt_family="MER5A" repeat_region 419216..419313 /gene="CAV1" /rpt_family="MER94" repeat_region 420050..420094 /gene="CAV1" /rpt_family="AT_rich" repeat_region complement(421428..421617) /rpt_family="MIR" repeat_region 422222..422243 /gene="CAV1" /rpt_family="(CAAAAA)n" repeat_region complement(424458..424897) /rpt_family="MLT2C1" repeat_region complement(426709..426878) /rpt_family="MER5B" repeat_region 427446..427614 /gene="CAV1" /rpt_family="MIR3" repeat_region complement(428723..428874) /rpt_family="L2" repeat_region 429308..429534 /gene="CAV1" /rpt_family="MER20" repeat_region complement(431167..431379) /rpt_family="MIR" repeat_region 431510..431669 /gene="CAV1" /rpt_family="MER5A" repeat_region 431681..432028 /gene="CAV1" /rpt_family="L1MC2" repeat_region 432463..432581 /gene="CAV1" /rpt_family="MIRb" repeat_region complement(434736..434840) /rpt_family="MER5A" repeat_region 435027..435047 /gene="CAV1" /rpt_family="AT_rich" repeat_region complement(435252..435828) /rpt_family="MLT1F2" repeat_region complement(436090..436549) /rpt_family="MLT1L" repeat_region 437131..437169 /gene="CAV1" /rpt_family="AT_rich" misc_feature 438107..558938 /note="faj; AC145851.3; finished" repeat_region 438516..438668 /gene="CAV1" /rpt_family="MIRm" repeat_region 438905..439015 /gene="CAV1" /rpt_family="MIR" repeat_region complement(439150..439289) /rpt_family="MIRb" repeat_region 439613..439638 /gene="CAV1" /rpt_family="AT_rich" repeat_region 439861..439938 /gene="CAV1" /rpt_family="MIRb" repeat_region 440059..440125 /gene="CAV1" /rpt_family="tRNA-Thr-ACY_" repeat_region complement(440881..441111) /rpt_family="MER89-int" repeat_region complement(441726..442128) /rpt_family="MER89-int" repeat_region 442815..443010 /gene="CAV1" /rpt_family="MIRb" repeat_region complement(443998..444151) /rpt_family="MER5A" repeat_region 446552..446629 /rpt_family="(TG)n" repeat_region 447737..447993 /rpt_family="L1ME4a" repeat_region 448032..448314 /rpt_family="L1ME4a" repeat_region complement(448350..448549) /rpt_family="MIRb" repeat_region complement(448746..448883) /rpt_family="MIR" repeat_region complement(448981..449083) /rpt_family="L1MCb" repeat_region 449112..449179 /rpt_family="MER91C" repeat_region complement(449183..449272) /rpt_family="L1MCb" repeat_region 449301..449712 /rpt_family="L2" repeat_region complement(449726..450518) /rpt_family="L1MCb" repeat_region 450519..450539 /rpt_family="(TTGG)n" repeat_region complement(450540..451126) /rpt_family="L1MCb" repeat_region 451350..451389 /rpt_family="(TGGA)n" repeat_region complement(452330..452502) /rpt_family="MIRb" repeat_region complement(453078..453236) /rpt_family="MLT1C" repeat_region complement(454806..454907) /rpt_family="MIR" repeat_region 455879..455990 /rpt_family="L2" repeat_region 456103..456302 /rpt_family="MER3" repeat_region 456320..456367 /rpt_family="L2" repeat_region 457097..457284 /rpt_family="MIRb" repeat_region 457342..457370 /rpt_family="AT_rich" repeat_region 459327..459369 /rpt_family="L3" repeat_region 459773..459897 /rpt_family="Charlie9" repeat_region 459939..460016 /rpt_family="Charlie9" repeat_region complement(460236..460686) /rpt_family="LTR16C" misc_feature 460943..461019 /note="single clone coverage" repeat_region 461071..461108 /rpt_family="AT_rich" repeat_region 462211..462317 /rpt_family="MLT1J2" repeat_region 462388..462587 /rpt_family="MLT1J1" repeat_region complement(462780..462830) /rpt_family="MIRb" repeat_region 463073..463478 /rpt_family="L1MC2" repeat_region complement(464690..464910) /rpt_family="MER58A" repeat_region 466556..466693 /rpt_family="MER5B" repeat_region 466723..466789 /rpt_family="MIRm" repeat_region 468541..469534 /rpt_family="L1M4c" repeat_region 469581..470257 /rpt_family="L1M4" repeat_region 470836..470864 /rpt_family="AT_rich" repeat_region 471413..471540 /rpt_family="MIR" repeat_region complement(471811..471871) /rpt_family="MER81" repeat_region complement(473307..473494) /rpt_family="MER3" repeat_region complement(473702..473867) /rpt_family="MIR3" repeat_region complement(476043..476226) /rpt_family="MER63A" repeat_region complement(476444..476948) /rpt_family="L3" repeat_region 477335..477455 /rpt_family="MLT1J2" repeat_region 477904..477939 /rpt_family="AT_rich" repeat_region complement(479555..479697) /rpt_family="MIRb" repeat_region complement(480585..480616) /rpt_family="MIRb" repeat_region 480624..480657 /rpt_family="polypurine" repeat_region 480786..481135 /rpt_family="MLT1G" repeat_region 481600..481632 /rpt_family="(G)n" repeat_region 481649..481718 /rpt_family="AT_rich" repeat_region complement(482430..482510) /rpt_family="L2" repeat_region 482849..482982 /rpt_family="MLT1B" repeat_region complement(483905..484387) /rpt_family="MLT1C" repeat_region 485848..485949 /rpt_family="MIRb" repeat_region complement(485974..486075) /rpt_family="MIR" repeat_region 486078..486307 /rpt_family="MLT1C" repeat_region complement(486318..486719) /rpt_family="MLT1C" repeat_region 486749..486926 /rpt_family="MLT1C" repeat_region complement(487041..487107) /rpt_family="Charlie4" repeat_region 487805..487839 /rpt_family="polypurine" repeat_region complement(489646..489842) /rpt_family="L1ME3B" repeat_region complement(490280..490511) /rpt_family="L1ME3B" repeat_region complement(491088..491223) /rpt_family="L2" repeat_region complement(491256..491425) /rpt_family="MIRb" repeat_region 492386..492422 /rpt_family="(TAAA)n" repeat_region 492771..493058 /rpt_family="L1MB4" repeat_region 493072..493289 /rpt_family="L1MC2" repeat_region complement(496846..497060) /rpt_family="MIRb" repeat_region complement(497559..497631) /rpt_family="tRNA-Ile-ATT" repeat_region complement(497725..497886) /rpt_family="L2" repeat_region 497882..498084 /rpt_family="MIRb" repeat_region 498684..498775 /rpt_family="MLT1C" repeat_region 500092..500246 /rpt_family="MIR" repeat_region complement(500295..500387) /rpt_family="L2" repeat_region 501791..501918 /rpt_family="L2" misc_feature 501888..501948 /note="single clone coverage" repeat_region 502003..502023 /rpt_family="(TTG)n" repeat_region 502192..503829 /rpt_family="L2" misc_feature 503889 /note="low quality single stranded/single chemistry region" misc_feature 503892 /note="low quality single stranded/single chemistry region" misc_feature 503895..503898 /note="low quality single stranded/single chemistry region" misc_feature 503902..503909 /note="low quality single stranded/single chemistry region" misc_feature 503998..504059 /note="single clone coverage" repeat_region 504032..504174 /rpt_family="L2" repeat_region complement(504419..504849) /rpt_family="MLT1C" repeat_region 506144..506238 /rpt_family="L1MC1" misc_feature 506211..506253 /note="single clone coverage" repeat_region 506267..506337 /rpt_family="A-rich" repeat_region complement(506621..506694) /rpt_family="MIRb" repeat_region 507069..507098 /rpt_family="AT_rich" repeat_region 507118..507152 /rpt_family="AT_rich" repeat_region 507176..507206 /rpt_family="AT_rich" repeat_region 507383..507437 /rpt_family="AT_rich" repeat_region 507756..507824 /rpt_family="tRNA-Ala-GCA" repeat_region 507865..507935 /rpt_family="tRNA-Ala-GCA" repeat_region complement(508618..508831) /rpt_family="MLT1H2" repeat_region 509012..509352 /rpt_family="L1M4c" repeat_region 509943..510864 /rpt_family="L1M4c" repeat_region 510910..515050 /rpt_family="L1MB3" repeat_region 515333..515657 /rpt_family="L1MB8" repeat_region 516718..516805 /rpt_family="GA-rich" repeat_region 516866..517022 /rpt_family="MIRb" repeat_region complement(517719..517900) /rpt_family="MIR3" repeat_region complement(518747..518792) /rpt_family="L4" repeat_region complement(518997..519329) /rpt_family="MER46C" repeat_region 519531..519712 /rpt_family="MIR3" repeat_region 519740..519780 /rpt_family="AT_rich" repeat_region 520661..520693 /rpt_family="(TA)n" repeat_region 521025..521056 /rpt_family="AT_rich" repeat_region 521384..521407 /rpt_family="(TTTA)n" repeat_region 521910..522075 /rpt_family="L1MC2" repeat_region complement(522467..522667) /rpt_family="MIR" repeat_region 523992..524087 /rpt_family="L2" repeat_region 524386..524407 /rpt_family="AT_rich" repeat_region complement(524501..524876) /rpt_family="L1ME3B" repeat_region 524901..525296 /rpt_family="LTR16A1" repeat_region 525468..525499 /rpt_family="AT_rich" repeat_region complement(525653..525859) /rpt_family="MIR" repeat_region 526173..526196 /rpt_family="(TAAA)n" repeat_region complement(526212..526338) /rpt_family="MIR" repeat_region 526461..526689 /rpt_family="MLT1D" repeat_region 527043..527352 /rpt_family="L1MC2" repeat_region 527358..527387 /rpt_family="AT_rich" repeat_region 527405..527636 /rpt_family="MLT1D" repeat_region complement(527731..527791) /rpt_family="L1MEd" repeat_region 532849..532984 /rpt_family="MIRb" repeat_region 534875..535005 /rpt_family="L1M4c" repeat_region 535652..536529 /rpt_family="L1M4c" repeat_region 536544..537960 /rpt_family="L1M4c" repeat_region 539188..539477 /rpt_family="L1MC1" repeat_region 539482..539536 /rpt_family="AT_rich" repeat_region 539655..541424 /rpt_family="L1M4c" repeat_region complement(542507..542543) /rpt_family="LTR16D" repeat_region 542598..542767 /rpt_family="MER45A" repeat_region complement(542907..542995) /rpt_family="LTR16D" repeat_region 544480..544544 /rpt_family="tRNA-Ala-GCY_" repeat_region complement(544864..545069) /rpt_family="ERVL" repeat_region complement(545485..545631) /rpt_family="LTR16D" repeat_region complement(546287..546655) /rpt_family="L4" repeat_region complement(547128..547268) /rpt_family="L4" repeat_region 547286..547530 /rpt_family="MLT1J" repeat_region complement(548269..548388) /rpt_family="LTR45C" repeat_region complement(549275..549564) /rpt_family="MLT1J" repeat_region 549756..549860 /rpt_family="MLT1G1" repeat_region 550131..550151 /rpt_family="AT_rich" repeat_region 550236..550652 /rpt_family="MLT1G1" repeat_region 550932..551085 /rpt_family="L1MC2" repeat_region complement(551788..552187) /rpt_family="MLT1J" repeat_region complement(554162..554220) /rpt_family="L2" repeat_region complement(555048..555156) /rpt_family="MIR3" repeat_region 555333..555729 /rpt_family="L2" repeat_region complement(555892..555965) /rpt_family="LTR33" repeat_region complement(555967..556028) /rpt_family="MLT1E3" misc_feature 556560^556561 /note="bacterial transposon excised; IS10 element sequence can be found in GenBank Accession Number J01829.1 nucleotides 1-1329" repeat_region 556724..556745 /rpt_family="AT_rich" repeat_region 556763..556831 /rpt_family="tRNA-Ala-GCY_" repeat_region 556863..556897 /rpt_family="(T)n" repeat_region complement(556909..557077) /rpt_family="L1MC3" repeat_region complement(556988..557135) /rpt_family="L1MC2" repeat_region complement(557144..557467) /rpt_family="MLT1E2" repeat_region 557892..557929 /rpt_family="AT_rich" repeat_region complement(557938..558150) /rpt_family="MLT1E2" repeat_region complement(558156..558590) /rpt_family="LTR33" repeat_region 558770..558861 /rpt_family="HAL1" repeat_region 558916..559003 /rpt_family="HAL1" misc_feature 558939..639534 /note="fak; AC146367.3; finished" misc_feature 561451..561497 /note="single clone coverage" repeat_region 562131..562961 /rpt_family="L1M2c" repeat_region 562991..565516 /rpt_family="L1MEe" repeat_region 565910..565942 /rpt_family="AT_rich" repeat_region 565958..567283 /rpt_family="L1MB3" repeat_region 567596..567861 /rpt_family="L1MB8" repeat_region 568259..568298 /rpt_family="AT_rich" repeat_region 568419..568550 /rpt_family="L1MB7" repeat_region complement(570592..570731) /rpt_family="MLT2E" repeat_region complement(570765..570864) /rpt_family="MLT2E" repeat_region complement(570991..571076) /rpt_family="MLT2E" repeat_region 571485..571536 /rpt_family="AT_rich" repeat_region 571601..572052 /rpt_family="L2" repeat_region complement(573340..573406) /rpt_family="MIR" repeat_region 573668..573708 /rpt_family="(GGGA)n" repeat_region 574254..574449 /rpt_family="MIRb" repeat_region 574678..574709 /rpt_family="AT_rich" repeat_region 574903..574958 /rpt_family="MER103" repeat_region 574959..574982 /rpt_family="(TTTTG)n" repeat_region 574983..575077 /rpt_family="MER103" repeat_region complement(575657..575853) /rpt_family="MIR" repeat_region complement(576187..576255) /rpt_family="MLT1J" repeat_region 577210..577336 /rpt_family="MIR3" repeat_region 577417..577495 /rpt_family="MIRb" gene 578693..699842 /gene="MET" mRNA join(578693..578869,606659..607875,634592..634783, 648079..648213,648974..649147,653753..653913, 655912..656014,656132..656268,657115..657276, 658045..658144,661425..661643,673640..673786, 674925..675081,675290..675430,678238..678468, 680394..680474,683229..683410,685955..686064, 687278..687443,697349..697485,697590..699842) /gene="MET" /product="met proto-oncogene precursor" repeat_region 579295..579317 /gene="MET" /rpt_family="GC_rich" repeat_region complement(581490..581607) /rpt_family="L2" repeat_region complement(582664..582996) /rpt_family="L2" repeat_region complement(583020..583067) /rpt_family="MER91B" repeat_region 584430..584457 /gene="MET" /rpt_family="AT_rich" repeat_region 584763..585047 /gene="MET" /rpt_family="MER121" repeat_region 585283..585321 /gene="MET" /rpt_family="L2" repeat_region 586968..587002 /gene="MET" /rpt_family="AT_rich" repeat_region 587348..587404 /gene="MET" /rpt_family="(TAAA)n" repeat_region 588653..588814 /gene="MET" /rpt_family="GA-rich" repeat_region 589183..589205 /gene="MET" /rpt_family="GC_rich" repeat_region 589206..589244 /gene="MET" /rpt_family="GA-rich" repeat_region 590269..591017 /gene="MET" /rpt_family="L2" repeat_region complement(591246..591802) /rpt_family="L2" misc_feature 591734 /gene="MET" /note="low quality single stranded/single chemistry region" misc_feature 591736 /gene="MET" /note="low quality single stranded/single chemistry region" repeat_region 591816..592987 /gene="MET" /rpt_family="L2" repeat_region 593093..593461 /gene="MET" /rpt_family="L2" repeat_region 593669..593706 /gene="MET" /rpt_family="polypyrimidine" repeat_region 593726..593765 /gene="MET" /rpt_family="(CA)n" repeat_region complement(595025..595058) /rpt_family="MIR3" repeat_region complement(596097..596187) /rpt_family="MER53" repeat_region 596305..596503 /gene="MET" /rpt_family="L3b" repeat_region complement(596534..596734) /rpt_family="MIRb" repeat_region complement(598362..598522) /rpt_family="MLT1K" repeat_region 598941..599026 /gene="MET" /rpt_family="MIRb" repeat_region complement(600021..600222) /rpt_family="MER63A" repeat_region complement(600237..600327) /rpt_family="MIR" repeat_region 600369..600587 /gene="MET" /rpt_family="L2" repeat_region complement(600608..600829) /rpt_family="MIR" repeat_region 601715..601747 /gene="MET" /rpt_family="AT_rich" repeat_region 602713..602739 /gene="MET" /rpt_family="(TAAA)n" repeat_region 603774..603869 /gene="MET" /rpt_family="L2" repeat_region 604224..604353 /gene="MET" /rpt_family="L2" repeat_region complement(604979..605045) /rpt_family="MER117" repeat_region 605187..605420 /gene="MET" /rpt_family="L2" repeat_region 605443..605545 /gene="MET" /rpt_family="MIRb" repeat_region complement(605550..605674) /rpt_family="L2" CDS join(606673..607875,634592..634783,648079..648213, 648974..649147,653753..653913,655912..656014, 656132..656268,657115..657276,658045..658144, 661425..661643,673640..673786,674925..675081, 675290..675430,678238..678468,680394..680474, 683229..683410,685955..686064,687278..687443, 697349..697485,697590..697797) /gene="MET" /note="hepatocyte growth factor receptor; based on human NCBI RefSeq Accession Number NM_000245.2" /codon_start=1 /product="met proto-oncogene precursor" /protein_id="ABI93628.1" /translation="MKAPTVLAPGILVLLFTLVQKSNGECREALAKSEMNVNMKYQLP NFTAETPIQNVVLHKHHIYLGAVNYIYVLNDKDLQKVAEYKTGPVLEHPDCVPCQNCS SKANLSGSAWRDNINMALLVDTYYDDQLISCGSVNRGTCQRHVFPPHNTADIQSEVRC MYSPQPEEEPSQCPDCVVSALGTKVLLTVKDRFINFFVGNTINSSYLPDHSLHSISVR RLKETQDGFKFLTDQSYIDVLPEFRDSYPIKYVHAFESNHFIYFLTVQRETLDSQTFH TRIIRFCSVDSGLHSYMEMPLECILTEKRRKRSTRQEVFNILQAAYVSKPGAHLAKQI GASPNDDILYGVFAQSKPDSAEPMNRSAVCAFPIKYVNEFFNKIVNKNNVRCLQHFYG PNHEHCFNRTLLRNSSGCEVRSDEYRTEFTTALQRVDLFMGQFNQVLLTSISTFIKGD LTIANLGTSEGRFMQVVVSRSVLPAPHVNFLLDSNPVSLEALVEDPVNQNGYTLVVTG KKITRIPLDGLGCGHFQSCSQCLSAPPFVQCGWCQDKCVQVEECPNGTWTQEICLPTV YEVFPTSAPLEGGTMLTICGWDFGFRRNNKFDLKKTRVLVGNESCTLTLSESTTNTLK CTVGHAMNENFNMSIIISNGRRTVHYNAFSYVDPIITSIFPKYGPKAGGTLLTLTGKY LNSGNSRHISIGGKTCTLKSVSNSILECYTPAQIISTEFPIKLKIDLANREASSFSYR EDPIVYEIHPTKSFLSGGSTITGVGKNLNSVSVTRMVINVHEARKNFTVACQHRSNSE IMCCTTPSLQQLNLQLPLKTRAFFVLDGIYSNYFDLIYVHNPVFKPFEKPVMISMGRE NVLEIKGNDIDPEAVKGEVLKVGNKSCENIHSRSQAVLCTVPNDLLKLNSVLYIEWKQ AVSSYILGKVIVQSDQSFTGVIVGVVAISIILLLLLGLFLWLKKKKQIKDLGSELVRY DARVHTPHLDRLVSARSVSPTTEMVSNESVDYRATFPEDQFPNSSQNGSCRQVQYPLM DLSPILTSGDSDISSPLLQNVVHIDLSALNPELVQEVQHVVIGPSSLIVHFNEVIGRG HFGCVYHGTLLDSDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDRLYEVMLKC WHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVNVKCIAPYPSLLSQDDLDGE VDT" repeat_region complement(611268..611933) /rpt_family="Kanga2_a" repeat_region 612406..612621 /gene="MET" /rpt_family="MIRb" repeat_region 612990..613019 /gene="MET" /rpt_family="AT_rich" repeat_region 613059..613267 /gene="MET" /rpt_family="MIRb" repeat_region 613689..613712 /gene="MET" /rpt_family="AT_rich" repeat_region 614471..614507 /gene="MET" /rpt_family="AT_rich" repeat_region 614900..614967 /gene="MET" /rpt_family="tRNA-Ala-GCY_" repeat_region 616129..616149 /gene="MET" /rpt_family="AT_rich" repeat_region complement(617216..617427) /rpt_family="L2" repeat_region complement(617682..617750) /rpt_family="tRNA-Ala-GCA" repeat_region complement(619810..620166) /rpt_family="L1ME3B" repeat_region 620549..620572 /gene="MET" /rpt_family="AT_rich" repeat_region 621547..621756 /gene="MET" /rpt_family="L2" repeat_region complement(621774..621965) /rpt_family="MER63A" repeat_region 624257..624320 /gene="MET" /rpt_family="MER58B" repeat_region 624397..624438 /gene="MET" /rpt_family="(CAAAAA)n" repeat_region 624458..624519 /gene="MET" /rpt_family="tRNA-Ala-GCG" repeat_region 624531..624633 /gene="MET" /rpt_family="MER58B" repeat_region 624774..624874 /gene="MET" /rpt_family="L2" repeat_region complement(624875..624979) /rpt_family="L1MB8" repeat_region complement(625022..625207) /rpt_family="MIR" repeat_region 626272..626354 /gene="MET" /rpt_family="L1MC4a" repeat_region complement(627326..627407) /rpt_family="MIR3" repeat_region 627484..627580 /gene="MET" /rpt_family="MIR" repeat_region complement(627592..627707) /rpt_family="MIR3" repeat_region 627964..628054 /gene="MET" /rpt_family="MIRb" repeat_region 628221..628251 /gene="MET" /rpt_family="(TATATG)n" repeat_region complement(628253..628446) /rpt_family="L1ME3B" repeat_region 629408..629504 /gene="MET" /rpt_family="MIR3" repeat_region 629542..629746 /gene="MET" /rpt_family="MIRm" repeat_region 630859..630881 /gene="MET" /rpt_family="GC_rich" repeat_region 630889..630921 /gene="MET" /rpt_family="AT_rich" repeat_region complement(631365..631461) /rpt_family="L2" repeat_region complement(632525..633734) /rpt_family="L2" misc_feature 633624..633674 /gene="MET" /note="single clone coverage" repeat_region complement(633893..634077) /rpt_family="MIR" repeat_region 637566..637594 /gene="MET" /rpt_family="(TG)n" misc_feature 639535..715325 /note="iwo; AC156761.3; finished" repeat_region 642513..642902 /gene="MET" /rpt_family="L1MC1" repeat_region 642922..643635 /gene="MET" /rpt_family="L1MB8" repeat_region 643709..643735 /gene="MET" /rpt_family="AT_rich" repeat_region 644643..644834 /gene="MET" /rpt_family="MIR" repeat_region complement(645966..646030) /rpt_family="MIRm" repeat_region 646607..647151 /gene="MET" /rpt_family="L1ME1" repeat_region complement(647611..647666) /rpt_family="MIR" repeat_region complement(649822..649951) /rpt_family="L2" repeat_region 650536..650555 /gene="MET" /rpt_family="(TG)n" repeat_region 651506..651529 /gene="MET" /rpt_family="(TTTTG)n" repeat_region 653080..653102 /gene="MET" /rpt_family="MIRm" repeat_region complement(654360..654527) /rpt_family="MIRb" repeat_region complement(654947..655002) /rpt_family="MIRb" repeat_region 659497..659564 /gene="MET" /rpt_family="tRNA-Ala-GCA" repeat_region 660153..660196 /gene="MET" /rpt_family="AT_rich" repeat_region 660234..660284 /gene="MET" /rpt_family="AT_rich" repeat_region 660648..660863 /gene="MET" /rpt_family="MIR" repeat_region complement(660995..661132) /rpt_family="MIRb" repeat_region 661975..662003 /gene="MET" /rpt_family="(A)n" repeat_region complement(662165..662268) /rpt_family="MIR3" repeat_region complement(663957..664166) /rpt_family="MIRb" repeat_region 665539..665614 /gene="MET" /rpt_family="L2" repeat_region 665616..665749 /gene="MET" /rpt_family="MIRb" repeat_region 667092..667117 /gene="MET" /rpt_family="(A)n" repeat_region complement(667684..667751) /rpt_family="tRNA-Ala-GCA" repeat_region 667913..668045 /gene="MET" /rpt_family="L1MB4" repeat_region 668561..668596 /gene="MET" /rpt_family="AT_rich" repeat_region 668615..668914 /gene="MET" /rpt_family="L1MB4" repeat_region 668952..669654 /gene="MET" /rpt_family="L1MB4" repeat_region 669669..670426 /gene="MET" /rpt_family="L1MB4" repeat_region 670455..670505 /gene="MET" /rpt_family="AT_rich" repeat_region 670889..670928 /gene="MET" /rpt_family="AT_rich" repeat_region 670929..671704 /gene="MET" /rpt_family="L1MB4" repeat_region 672494..672569 /gene="MET" /rpt_family="L1MB8" repeat_region 672889..672918 /gene="MET" /rpt_family="AT_rich" repeat_region 673073..673254 /gene="MET" /rpt_family="MER5B" repeat_region complement(674366..674411) /rpt_family="MIR3" repeat_region 674580..674688 /gene="MET" /rpt_family="L2" repeat_region 677803..677825 /gene="MET" /rpt_family="(CATATA)n" repeat_region 679568..679694 /gene="MET" /rpt_family="L2" repeat_region 681089..681199 /gene="MET" /rpt_family="MLT1K" repeat_region 681439..681489 /gene="MET" /rpt_family="AT_rich" repeat_region 681540..681570 /gene="MET" /rpt_family="(C)n" repeat_region 682772..682913 /gene="MET" /rpt_family="MER58B" repeat_region 683806..683943 /gene="MET" /rpt_family="L2" repeat_region 684019..684296 /gene="MET" /rpt_family="MER33" repeat_region 684316..684391 /gene="MET" /rpt_family="(TA)n" repeat_region 684393..684511 /gene="MET" /rpt_family="L2" repeat_region 685283..685488 /gene="MET" /rpt_family="MIRb" misc_feature 687860..687940 /gene="MET" /note="single clone coverage" misc_feature 687862..687866 /gene="MET" /note="low quality single stranded/single chemistry region" misc_feature 687875..687876 /gene="MET" /note="low quality single stranded/single chemistry region" misc_feature 687881..687882 /gene="MET" /note="low quality single stranded/single chemistry region" misc_feature 687888..687895 /gene="MET" /note="low quality single stranded/single chemistry region" misc_feature 687901 /gene="MET" /note="low quality single stranded/single chemistry region" misc_feature 687904..687908 /gene="MET" /note="low quality single stranded/single chemistry region" misc_feature 687916..687928 /gene="MET" /note="low quality single stranded/single chemistry region" misc_feature 687930..687937 /gene="MET" /note="low quality single stranded/single chemistry region" repeat_region 687958..687977 /gene="MET" /rpt_family="(TAAA)n" repeat_region 689091..689316 /gene="MET" /rpt_family="L2" repeat_region 689393..689517 /gene="MET" /rpt_family="L2" repeat_region complement(689520..690612) /rpt_family="L1ME1" repeat_region 690721..691172 /gene="MET" /rpt_family="MLT1C" repeat_region 691179..691277 /gene="MET" /rpt_family="MLT1C-int" repeat_region 691660..691692 /gene="MET" /rpt_family="G-rich" repeat_region 691717..692461 /gene="MET" /rpt_family="MLT1C-int" repeat_region 692716..692939 /gene="MET" /rpt_family="MLT1C-int" repeat_region 692968..692996 /gene="MET" /rpt_family="AT_rich" repeat_region 693434..693533 /gene="MET" /rpt_family="MLT1C-int" repeat_region 693553..693738 /gene="MET" /rpt_family="MLT1C" repeat_region 694601..694739 /gene="MET" /rpt_family="MIRb" repeat_region 694846..694967 /gene="MET" /rpt_family="L2" repeat_region complement(695269..695356) /rpt_family="MLT1C" repeat_region 696575..696713 /gene="MET" /rpt_family="MIRm" repeat_region 699057..699087 /gene="MET" /rpt_family="AT_rich" repeat_region 700806..700938 /rpt_family="MIRb" repeat_region complement(701675..701731) /rpt_family="L3" repeat_region 702230..702253 /rpt_family="AT_rich" repeat_region 703404..703424 /rpt_family="AT_rich" repeat_region 704286..704355 /rpt_family="tRNA-Ala-GCA" repeat_region 704739..704760 /rpt_family="AT_rich" repeat_region 705191..705637 /rpt_family="MLT2C1" repeat_region 705639..705853 /rpt_family="MIR" repeat_region 705876..705913 /rpt_family="AT_rich" repeat_region 706059..706175 /rpt_family="MIRb" repeat_region 706800..706829 /rpt_family="AT_rich" repeat_region complement(707192..707574) /rpt_family="L2" repeat_region 707575..707603 /rpt_family="(TTTTG)n" repeat_region complement(707604..708188) /rpt_family="L2" repeat_region 709077..709100 /rpt_family="AT_rich" repeat_region complement(709712..710345) /rpt_family="L1M4" repeat_region complement(710392..711382) /rpt_family="L1M4c" repeat_region complement(712909..713103) /rpt_family="MLT1J" repeat_region 713595..713628 /rpt_family="AT_rich" repeat_region complement(713633..713744) /rpt_family="MLT1J" repeat_region 714574..714633 /rpt_family="L2" misc_feature 715326..765325 /note="clone gap" gap 715326..765325 /estimated_length=50000 misc_feature 765326..910199 /note="kaj; AC161329.3; finished" repeat_region 765506..765548 /rpt_family="AT_rich" repeat_region 765616..765644 /rpt_family="AT_rich" repeat_region 765990..766024 /rpt_family="AT_rich" repeat_region 766025..766087 /rpt_family="L1MB4" repeat_region 766166..766211 /rpt_family="A-rich" repeat_region 766230..766289 /rpt_family="tRNA-Ala-GCG" repeat_region 766310..767756 /rpt_family="L1MB4" repeat_region 768124..768610 /rpt_family="L1MB4" repeat_region complement(768977..769181) /rpt_family="LTR40b" repeat_region 769219..769394 /rpt_family="L2" repeat_region complement(769607..769706) /rpt_family="MIRb" repeat_region complement(769914..770023) /rpt_family="MIRb" repeat_region 770332..770359 /rpt_family="AT_rich" repeat_region 771682..771861 /rpt_family="MER53" repeat_region 771969..772074 /rpt_family="L2" repeat_region complement(772162..772350) /rpt_family="L1MC2" gene 772669..839289 /gene="CAPZA2" mRNA join(772669..772801,805317..805380,815341..815392, 821105..821168,824516..824722,826325..826404, 831078..831156,834462..834533,836949..837011, 837761..839289) /gene="CAPZA2" /product="capping protein (actin filament) muscle Z-line, alpha 2" CDS join(772763..772801,805317..805380,815341..815392, 821105..821168,824516..824722,826325..826404, 831078..831156,834462..834533,836949..837011, 837761..837901) /gene="CAPZA2" /note="F-actin capping protein alpha-2 subunit; based on human NCBI RefSeq Accession Number NM_006136.2" /codon_start=1 /product="capping protein (actin filament) muscle Z-line, alpha 2" /protein_id="ABI93629.1" /translation="MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDN LLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLR KEATDPRPYEAENAIESWRTSIETALRAYVKEHYPNGVCTVYGKKIDGQQTIIACIES HQFQAKNFWNGRWRSEWKFTISPSATQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTV SNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS YKIGKEMQNA" repeat_region complement(775002..775248) /rpt_family="MIRb" repeat_region 776283..776319 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 777142..777275 /gene="CAPZA2" /rpt_family="MIRb" repeat_region complement(777637..777753) /rpt_family="L1M4" repeat_region complement(777752..777832) /rpt_family="L1M4c" repeat_region 777887..777931 /gene="CAPZA2" /rpt_family="(CACCC)n" repeat_region complement(778259..779919) /rpt_family="L1M4c" repeat_region 779924..779961 /gene="CAPZA2" /rpt_family="(TTTTTG)n" repeat_region complement(781201..781286) /rpt_family="L2" repeat_region complement(782082..782229) /rpt_family="MER5A" repeat_region complement(782346..782438) /rpt_family="MER53" repeat_region complement(782658..783235) /rpt_family="MER82" repeat_region 783794..783828 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region complement(785496..785584) /rpt_family="MIR" repeat_region complement(785842..786263) /rpt_family="L2" repeat_region 786367..786395 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region complement(786819..787062) /rpt_family="L2" repeat_region 787177..787334 /gene="CAPZA2" /rpt_family="MER5B" repeat_region 787691..787744 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 788351..788457 /gene="CAPZA2" /rpt_family="U6" repeat_region 788458..788673 /gene="CAPZA2" /rpt_family="L1MB4" repeat_region 789293..789333 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region complement(789914..789983) /rpt_family="tRNA-Ala-GCA" repeat_region 789998..790031 /gene="CAPZA2" /rpt_family="(TTTG)n" repeat_region complement(790034..790102) /rpt_family="tRNA-Ala-GCA" repeat_region 790439..790475 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region complement(792063..792156) /rpt_family="MIRb" repeat_region 793071..793098 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 793107..793171 /gene="CAPZA2" /rpt_family="L1M4" repeat_region 793229..793256 /gene="CAPZA2" /rpt_family="(CCA)n" repeat_region 793792..794345 /gene="CAPZA2" /rpt_family="L1M4" repeat_region 794688..794716 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 794718..795306 /gene="CAPZA2" /rpt_family="L1M4" repeat_region complement(795393..795640) /rpt_family="MLT1B" repeat_region 795767..796409 /gene="CAPZA2" /rpt_family="L1MD" repeat_region 796537..797429 /gene="CAPZA2" /rpt_family="L1M4" repeat_region complement(797430..797546) /rpt_family="L1M4" repeat_region 797950..797981 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 798054..798194 /gene="CAPZA2" /rpt_family="L1MB8" repeat_region 798353..798498 /gene="CAPZA2" /rpt_family="L1MC3" repeat_region 799758..799796 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 799929..799970 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region complement(800085..800489) /rpt_family="L1MC4" repeat_region complement(800517..800744) /rpt_family="L1MB3" repeat_region complement(800748..801143) /rpt_family="L1M4c" repeat_region complement(801138..801193) /rpt_family="L1MD" repeat_region complement(801591..803277) /rpt_family="L1M5" repeat_region 803488..803511 /gene="CAPZA2" /rpt_family="(TTTA)n" repeat_region 803811..803869 /gene="CAPZA2" /rpt_family="MIR" repeat_region complement(804009..804350) /rpt_family="L1MC2" repeat_region complement(804467..804630) /rpt_family="MER5A" repeat_region 804686..804749 /gene="CAPZA2" /rpt_family="MIRb" repeat_region 805590..805610 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 805762..805962 /gene="CAPZA2" /rpt_family="L1MB4" repeat_region 805963..805997 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 806333..806428 /gene="CAPZA2" /rpt_family="L1MB4" repeat_region 806623..806863 /gene="CAPZA2" /rpt_family="L1MB4" repeat_region 806882..807322 /gene="CAPZA2" /rpt_family="L1M4c" repeat_region 807333..807499 /gene="CAPZA2" /rpt_family="L1M4c" repeat_region 807900..808149 /gene="CAPZA2" /rpt_family="L1M4c" repeat_region 808594..808621 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region complement(808815..809023) /rpt_family="L1MC2" repeat_region complement(809045..809390) /rpt_family="L1MB4" repeat_region 809391..809423 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 809424..809444 /gene="CAPZA2" /rpt_family="GC_rich" repeat_region complement(809795..811188) /rpt_family="L1MB4" repeat_region complement(811201..811748) /rpt_family="L1MB4" repeat_region 811749..811774 /gene="CAPZA2" /rpt_family="(TTTA)n" repeat_region complement(811775..813456) /rpt_family="L1MB4" repeat_region 814055..814079 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 814737..814769 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 815134..815156 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 817316..817353 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 818501..818602 /gene="CAPZA2" /rpt_family="L2" repeat_region complement(818630..818780) /rpt_family="MIR3" repeat_region 819769..819805 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region complement(820002..820048) /rpt_family="L2" repeat_region 820624..820651 /gene="CAPZA2" /rpt_family="(TAAAA)n" repeat_region 820793..820901 /gene="CAPZA2" /rpt_family="MIRm" repeat_region complement(821885..822091) /rpt_family="L1M5" repeat_region 822111..822712 /gene="CAPZA2" /rpt_family="L1M" repeat_region 823075..823210 /gene="CAPZA2" /rpt_family="L1M" repeat_region 823553..823588 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 823611..824128 /gene="CAPZA2" /rpt_family="L1MC4a" repeat_region 825284..825438 /gene="CAPZA2" /rpt_family="L2" repeat_region 825453..825557 /gene="CAPZA2" /rpt_family="MER94" repeat_region 826575..826609 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 827453..827491 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 828131..828151 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 828741..828761 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 828869..828934 /gene="CAPZA2" /rpt_family="tRNA-Ala-GCY_" repeat_region 830989..831009 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 831512..831533 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 831635..831676 /gene="CAPZA2" /rpt_family="(TTTA)n" misc_feature 832259..832332 /gene="CAPZA2" /note="single clone coverage" repeat_region 832800..833012 /gene="CAPZA2" /rpt_family="MIR" repeat_region 833252..833274 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 833632..833717 /gene="CAPZA2" /rpt_family="L2" repeat_region 834054..834073 /gene="CAPZA2" /rpt_family="(TAAA)n" repeat_region complement(834149..834244) /rpt_family="L2" repeat_region 834539..834564 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region complement(834696..835743) /rpt_family="L1MB8" repeat_region 835916..835965 /gene="CAPZA2" /rpt_family="AT_rich" repeat_region 839109..839143 /gene="CAPZA2" /rpt_family="(TTTTTG)n" repeat_region complement(839714..839999) /rpt_family="L2" repeat_region complement(840038..840564) /rpt_family="L2" repeat_region 841825..841853 /rpt_family="(TTTTG)n" repeat_region 842019..842047 /rpt_family="AT_rich" repeat_region complement(842912..843349) /rpt_family="MLT2D" repeat_region 843769..843804 /rpt_family="(TTTG)n" repeat_region complement(844254..844556) /rpt_family="L1MC2" repeat_region 845799..845840 /rpt_family="AT_rich" repeat_region complement(846125..846405) /rpt_family="L1MC2" repeat_region 848181..848420 /rpt_family="L1M5" repeat_region 848415..848786 /rpt_family="L1M2" repeat_region 848852..848959 /rpt_family="MLT1J" repeat_region 848992..849048 /rpt_family="MLT1H-int" repeat_region complement(849100..849186) /rpt_family="MER20B" repeat_region 849265..849341 /rpt_family="MLT1H-int" repeat_region complement(850222..850437) /rpt_family="MLT1E1" repeat_region 850539..850764 /rpt_family="MLT1H-int" repeat_region complement(850962..851017) /rpt_family="tRNA-Ala-GCG" repeat_region 851113..851321 /rpt_family="MLT1J" repeat_region 851455..851478 /rpt_family="AT_rich" repeat_region 851504..851610 /rpt_family="U6" repeat_region 853296..853912 /rpt_family="L2" repeat_region 854152..854177 /rpt_family="GC_rich" repeat_region complement(854300..854374) /rpt_family="MLT1L" repeat_region 855078..855103 /rpt_family="AT_rich" repeat_region 855227..855318 /rpt_family="CT-rich" repeat_region 855350..855713 /rpt_family="MLT1J" repeat_region 855769..855838 /rpt_family="L2" repeat_region 856206..856238 /rpt_family="AT_rich" repeat_region 856566..856597 /rpt_family="AT_rich" repeat_region 857708..857727 /rpt_family="(TAAA)n" repeat_region 857899..858010 /rpt_family="L2" repeat_region 858451..858615 /rpt_family="L1MEc" repeat_region 858618..858922 /rpt_family="L1MEc" repeat_region 858923..858991 /rpt_family="tRNA-Ala-GCG" repeat_region 858992..859350 /rpt_family="L1MEc" repeat_region 859581..859608 /rpt_family="AT_rich" repeat_region 860367..860753 /rpt_family="MLT1D" repeat_region 861348..861375 /rpt_family="AT_rich" repeat_region 862289..862347 /rpt_family="AT_rich" repeat_region complement(862368..862531) /rpt_family="L1MB3" repeat_region 862594..862615 /rpt_family="AT_rich" repeat_region 863348..863410 /rpt_family="MLT2C2" repeat_region 863483..863775 /rpt_family="MLT2C1" repeat_region 863778..864423 /rpt_family="ERVL-C1" repeat_region 864590..865886 /rpt_family="ERVL-C1" repeat_region 865887..866020 /rpt_family="MLT2C1" repeat_region 866268..866346 /rpt_family="(TTATA)n" repeat_region 866806..866828 /rpt_family="AT_rich" repeat_region 866878..867210 /rpt_family="L1MC4_3endX" repeat_region 867863..867884 /rpt_family="(TAAAA)n" repeat_region 868703..868725 /rpt_family="(TTTG)n" repeat_region 869488..869557 /rpt_family="tRNA-Ala-GCA" repeat_region 869605..869665 /rpt_family="tRNA-Ala-GCG" repeat_region 869677..869717 /rpt_family="(CAAAA)n" repeat_region 872592..872659 /rpt_family="tRNA-Ala-GCG" repeat_region 872662..872688 /rpt_family="(CAAAA)n" repeat_region complement(873372..873502) /rpt_family="MIRb" repeat_region 873519..873613 /rpt_family="MIRb" repeat_region 874187..874423 /rpt_family="L1MC4" repeat_region 874448..874552 /rpt_family="L1MC5" repeat_region complement(874574..874618) /rpt_family="MLT2C1" repeat_region 874619..874653 /rpt_family="(TG)n" repeat_region complement(874654..875031) /rpt_family="MLT2C1" repeat_region 875051..875286 /rpt_family="L1MC4" repeat_region 875437..875677 /rpt_family="L1MC4_3endX" repeat_region 875765..875968 /rpt_family="L1ME4a" repeat_region complement(876466..876626) /rpt_family="MIR" repeat_region 878246..878265 /rpt_family="(A)n" repeat_region 878429..878470 /rpt_family="MIR" repeat_region 878661..878748 /rpt_family="GC_rich" gene 878803..1223649 /gene="ST7" mRNA join(878803..878953,1055283..1055365,1069212..1069371, 1091312..1091366,1092377..1092492,1094214..1094289, 1098349..1098503,1100700..1100797,1154054..1154168, 1178782..1178854,1180353..1180455,1202466..1202616, 1212603..1212695,1213790..1213929,1223380..1223649) /gene="ST7" /product="suppression of tumorigenicity 7, isoform a" CDS join(878803..878953,1055283..1055365,1069212..1069371, 1091312..1091366,1092377..1092492,1094214..1094289, 1098349..1098503,1100700..1100797,1154054..1154168, 1178782..1178854,1180353..1180455,1202466..1202616, 1212603..1212695,1213790..1213929,1223380..1223475) /gene="ST7" /note="HELG protein; suppression of tumorigenicity 7 (breast); family with sequence similarity 4, subfamily A, member 1; FAM4a1; based on human NCBI RefSeq Accession Number NM_018412.2" /codon_start=1 /product="suppression of tumorigenicity 7, isoform a" /protein_id="ABI93630.1" /translation="MAEAGTGFLEQLKSCIVWSWTYLWTVWFFFVLFLVYILRVPLKI NDNLSTVSMFLNTLTPKFYVALTGTSSLISGLILIFEWWYFRKYGTSFIEQVSVSHLR PLLGGVDNNSSNSSNSSNGDSDSNRQSVSECKVWRNPLNLFRGAEYNRYTWVTGREPL TYYDMNLSAQDHQTFFTCDSDHLRPADAIMQKAWRERNPQARISAAHEALEINECATA YILLAEEEATTIAEAEKLFKQALKAGDGCYRRSQQLQHHGSQYEAQHRRDTNVLVYIK RRLAMCARRLGRTREAVKMMRDLMKEFPLLSMFNIHENLLEALLELQAYADVQAVLAK YDDISLPKSATICYTAALLKARAVSDKFSPEAASRRGLSTAEMNAVEAIHRAVEFNPH VPKYLLEMKSLILPPEHILKRGDSEAIAYAFFHLAHWKRVEGALNLLHCTWEGTFRMI PYPLEKGHLFYPYPICTETADRELLPSFHEVSVYPKKELPFFILFTAGLCSFTAMLAL LTHQFPELMGVFAKAFLSTLFAPLNFVMEKVESILPSSLWHQLTRI" mRNA join(878803..878953,1055283..1055365,1069212..1069371, 1091312..1091366,1092377..1092492,1094214..1094289, 1096407..1096475,1098349..1098503,1100700..1100797, 1154054..1154168,1178782..1178854,1180353..1180455, 1202466..1202616,1212603..1212695,1213790..1213929, 1214693..1215547) /gene="ST7" /product="suppression of tumorigenicity 7, isoform b" CDS join(878803..878953,1055283..1055365,1069212..1069371, 1091312..1091366,1092377..1092492,1094214..1094289, 1096407..1096475,1098349..1098503,1100700..1100797, 1154054..1154168,1178782..1178854,1180353..1180455, 1202466..1202616,1212603..1212695,1213790..1213929, 1214693..1214812) /gene="ST7" /note="HELG protein; suppression of tumorigenicity 7 (breast); family with sequence similarity 4, subfamily A, member 1; FAM4a1; based on human NCBI RefSeq Accession Number NM_021908.1" /codon_start=1 /product="suppression of tumorigenicity 7, isoform b" /protein_id="ABI93631.1" /translation="MAEAGTGFLEQLKSCIVWSWTYLWTVWFFFVLFLVYILRVPLKI NDNLSTVSMFLNTLTPKFYVALTGTSSLISGLILIFEWWYFRKYGTSFIEQVSVSHLR PLLGGVDNNSSNSSNSSNGDSDSNRQSVSECKVWRNPLNLFRGAEYNRYTWVTGREPL TYYDMNLSAQDHQTFFTCDSDHLRPADAIMQKAWRERNPQARISAAHEALEINEIRSR VEVPLIASSTIWEIKLLPKCATAYILLAEEEATTIAEAEKLFKQALKAGDGCYRRSQQ LQHHGSQYEAQHRRDTNVLVYIKRRLAMCARRLGRTREAVKMMRDLMKEFPLLSMFNI HENLLEALLELQAYADVQAVLAKYDDISLPKSATICYTAALLKARAVSDKFSPEAASR RGLSTAEMNAVEAIHRAVEFNPHVPKYLLEMKSLILPPEHILKRGDSEAIAYAFFHLA HWKRVEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPICTETADRELLPSFHEVSVYP KKELPFFILFTAGLCSFTAMLALLTHQFPELMGVFAKAMIDIFCSAEFRDWNCKSIFI RVEDELEIPPAPQSQHFQN" repeat_region 879019..879110 /gene="ST7" /rpt_family="GC_rich" repeat_region 879456..879479 /gene="ST7" /rpt_family="GC_rich" repeat_region complement(880274..880611) /rpt_family="L1MC2" repeat_region 881167..881208 /gene="ST7" /rpt_family="AT_rich" repeat_region 882715..882742 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(883185..883235) /rpt_family="L1MC4" repeat_region complement(883263..883484) /rpt_family="L1MB3" repeat_region complement(883486..883774) /rpt_family="L1M4c" repeat_region complement(883794..884239) /rpt_family="L1M4c" repeat_region complement(884666..884713) /rpt_family="L1MB4" repeat_region complement(885071..885357) /rpt_family="L1MB4" repeat_region 885434..885469 /gene="ST7" /rpt_family="AT_rich" repeat_region 885770..885886 /gene="ST7" /rpt_family="MIRb" repeat_region complement(886372..886439) /rpt_family="tRNA-Ala-GCY_" repeat_region complement(886487..886542) /rpt_family="tRNA-Ala-GCG" repeat_region 886595..886635 /gene="ST7" /rpt_family="MIRm" repeat_region 886959..887028 /gene="ST7" /rpt_family="MIR3" repeat_region 887149..887248 /gene="ST7" /rpt_family="L2" repeat_region complement(888152..888395) /rpt_family="L1MC4" repeat_region 888704..888847 /gene="ST7" /rpt_family="MLT1C" repeat_region complement(888849..889034) /rpt_family="L1MC4" repeat_region complement(889053..890437) /rpt_family="L1MB4" repeat_region complement(890462..890593) /rpt_family="L1MB8" repeat_region complement(890598..890640) /rpt_family="L1MB4" repeat_region 890955..890983 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(890984..893393) /rpt_family="L1MB4" repeat_region complement(893453..893919) /rpt_family="LTR33" repeat_region 894376..894481 /gene="ST7" /rpt_family="L2" repeat_region 895049..895082 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(895875..896242) /rpt_family="L1MC4" repeat_region complement(896261..896603) /rpt_family="L1MC1" repeat_region complement(898724..902698) /rpt_family="L1MB4" repeat_region complement(902731..903465) /rpt_family="L1MB4" repeat_region 904384..904409 /gene="ST7" /rpt_family="(CAA)n" repeat_region 904484..904505 /gene="ST7" /rpt_family="GC_rich" repeat_region 904507..904682 /gene="ST7" /rpt_family="(CTCGG)n" repeat_region 904688..904715 /gene="ST7" /rpt_family="GC_rich" repeat_region complement(905154..905422) /rpt_family="L1MC4" repeat_region complement(905423..905479) /rpt_family="tRNA-Ala-GCY_" repeat_region complement(905480..905836) /rpt_family="L1MC4" repeat_region 906552..906656 /gene="ST7" /rpt_family="L2" repeat_region 906958..907035 /gene="ST7" /rpt_family="MIRb" repeat_region 907036..907068 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(907515..907814) /rpt_family="L1MC2" misc_feature 910200..960199 /gene="ST7" /note="clone gap" gap 910200..960199 /estimated_length=50000 misc_feature 960200..1031340 /gene="ST7" /note="mfb; AC173470.3; finished" repeat_region 960371..960710 /gene="ST7" /rpt_family="L2" repeat_region 961968..962216 /gene="ST7" /rpt_family="MIR" repeat_region 962409..962444 /gene="ST7" /rpt_family="AT_rich" repeat_region 962573..962651 /gene="ST7" /rpt_family="(TA)n" repeat_region 962667..962778 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(962815..963136) /rpt_family="L1MC2" repeat_region 964608..964641 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(965041..965267) /rpt_family="L1MC2" repeat_region 966634..966721 /gene="ST7" /rpt_family="CT-rich" repeat_region complement(968336..968683) /rpt_family="L1MC2" repeat_region 969681..969708 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(969709..969927) /rpt_family="L1ME3" repeat_region complement(974460..975015) /rpt_family="MLT1G1" repeat_region complement(975077..975248) /rpt_family="MER58B" repeat_region complement(975249..975686) /rpt_family="MLT1C" repeat_region complement(975695..975867) /rpt_family="MER58B" repeat_region complement(976478..977325) /rpt_family="L1MB7" repeat_region 977592..977620 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(977624..977691) /rpt_family="tRNA-Ala-GCY_" repeat_region 977948..977976 /gene="ST7" /rpt_family="AT_rich" repeat_region 978333..978490 /gene="ST7" /rpt_family="MIR" repeat_region 979015..979042 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(979621..979792) /rpt_family="L1M5" repeat_region 980238..980306 /gene="ST7" /rpt_family="CT-rich" repeat_region complement(980307..980454) /rpt_family="L1ME2" repeat_region complement(980621..980875) /rpt_family="L1MEc" repeat_region complement(981032..981098) /rpt_family="tRNA-Ala-GCY_" repeat_region 981596..981853 /gene="ST7" /rpt_family="L2" repeat_region 982551..982729 /gene="ST7" /rpt_family="MIR" repeat_region complement(987355..987480) /rpt_family="L1MC2" repeat_region complement(987500..987612) /rpt_family="L1MB8" repeat_region complement(987907..989213) /rpt_family="L1MB4" repeat_region 989240..989260 /gene="ST7" /rpt_family="AT_rich" repeat_region 989290..989320 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(989701..989921) /rpt_family="L1MB4" repeat_region complement(989928..990277) /rpt_family="L1MC2" repeat_region complement(991077..992581) /rpt_family="L1MB4" repeat_region complement(993014..993791) /rpt_family="L1MB4" repeat_region complement(993812..994544) /rpt_family="L1MB4" repeat_region complement(995151..995209) /rpt_family="L1MB4" repeat_region 996963..997174 /gene="ST7" /rpt_family="MIRb" repeat_region 998150..998173 /gene="ST7" /rpt_family="(TTTTA)n" repeat_region 998894..998960 /gene="ST7" /rpt_family="Charlie4" repeat_region 999658..999678 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(999682..999754) /rpt_family="tRNA-Ala-GCY_" repeat_region 999969..1000453 /gene="ST7" /rpt_family="MLT1D" repeat_region complement(1000550..1000751) /rpt_family="MLT1J" repeat_region 1001565..1001584 /gene="ST7" /rpt_family="(TAAA)n" repeat_region complement(1001632..1001744) /rpt_family="L1MC2" repeat_region 1002469..1002545 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1002582..1002652) /rpt_family="L1MC2" repeat_region complement(1002933..1002996) /rpt_family="L1MC2" repeat_region 1003291..1003357 /gene="ST7" /rpt_family="tRNA-Ala-GCY_" repeat_region 1004983..1005047 /gene="ST7" /rpt_family="tRNA-Ala-GCG" repeat_region 1005117..1005154 /gene="ST7" /rpt_family="AT_rich" repeat_region 1005226..1005253 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1005312..1005390) /rpt_family="Charlie4" repeat_region complement(1005721..1005967) /rpt_family="Charlie4" repeat_region complement(1006022..1006084) /rpt_family="Charlie4" repeat_region complement(1006203..1006393) /rpt_family="MIR" repeat_region 1006401..1006484 /gene="ST7" /rpt_family="L2" repeat_region 1006490..1007286 /gene="ST7" /rpt_family="L2" repeat_region complement(1007461..1007694) /rpt_family="MIRb" repeat_region 1007870..1008175 /gene="ST7" /rpt_family="L2" repeat_region 1008333..1008489 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1009443..1009728) /rpt_family="L2" repeat_region complement(1009754..1009865) /rpt_family="L1MC2" repeat_region 1010365..1010505 /gene="ST7" /rpt_family="MIR3" repeat_region 1010707..1010737 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1012264..1012324) /rpt_family="tRNA-Ala-GCG" repeat_region complement(1012481..1012545) /rpt_family="tRNA-Ala-GCY_" repeat_region 1012565..1012602 /gene="ST7" /rpt_family="AT_rich" repeat_region 1013282..1013332 /gene="ST7" /rpt_family="AT_rich" repeat_region 1013439..1013459 /gene="ST7" /rpt_family="AT_rich" repeat_region 1013507..1013736 /gene="ST7" /rpt_family="L1M4c" repeat_region 1014369..1014503 /gene="ST7" /rpt_family="L1M4c" repeat_region 1014519..1014627 /gene="ST7" /rpt_family="L2" repeat_region complement(1015864..1015994) /rpt_family="L2" repeat_region complement(1016701..1016880) /rpt_family="MIRb" repeat_region 1017019..1017375 /gene="ST7" /rpt_family="L2" repeat_region complement(1017448..1017494) /rpt_family="MIR" repeat_region 1018106..1018207 /gene="ST7" /rpt_family="L2" repeat_region complement(1018210..1018286) /rpt_family="L1M4" repeat_region 1019742..1019776 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1019788..1019849) /rpt_family="tRNA-Ala-GCY_" repeat_region 1020742..1020835 /gene="ST7" /rpt_family="MIR" repeat_region 1020836..1020859 /gene="ST7" /rpt_family="AT_rich" repeat_region 1021142..1021263 /gene="ST7" /rpt_family="MIRb" repeat_region 1022573..1022648 /gene="ST7" /rpt_family="T-rich" repeat_region 1022703..1022736 /gene="ST7" /rpt_family="(C)n" repeat_region 1024533..1024672 /gene="ST7" /rpt_family="L1MC4a" repeat_region 1024901..1025088 /gene="ST7" /rpt_family="MIR" repeat_region 1026167..1026206 /gene="ST7" /rpt_family="(TA)n" repeat_region complement(1026275..1026332) /rpt_family="MIRb" repeat_region 1026798..1026832 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1027274..1027339) /rpt_family="MIR3" repeat_region 1028955..1028984 /gene="ST7" /rpt_family="AT_rich" repeat_region 1029469..1029496 /gene="ST7" /rpt_family="AT_rich" repeat_region 1030104..1030152 /gene="ST7" /rpt_family="(TA)n" repeat_region 1030362..1030392 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1030395..1030589) /rpt_family="L1M5" repeat_region 1030732..1030752 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1031207..1031398) /rpt_family="MLT2C1" misc_feature 1031341..1109895 /gene="ST7" /note="kak; AC164516.2; finished" repeat_region 1031408..1031437 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1031882..1032025) /rpt_family="MLT2C1" repeat_region complement(1032587..1032686) /rpt_family="MLT2C1" repeat_region 1032749..1032967 /gene="ST7" /rpt_family="MARNA" repeat_region complement(1033103..1033326) /rpt_family="MER58A" repeat_region 1033605..1033638 /gene="ST7" /rpt_family="AT_rich" repeat_region 1034046..1034120 /gene="ST7" /rpt_family="MIR" repeat_region 1034333..1034558 /gene="ST7" /rpt_family="MIRb" repeat_region 1034781..1035086 /gene="ST7" /rpt_family="L1MB4" repeat_region 1035087..1035113 /gene="ST7" /rpt_family="(TA)n" repeat_region 1035114..1036047 /gene="ST7" /rpt_family="L1MB4" repeat_region 1036265..1036299 /gene="ST7" /rpt_family="A-rich" repeat_region 1036503..1036581 /gene="ST7" /rpt_family="A-rich" repeat_region complement(1037846..1038689) /rpt_family="L1MB4" repeat_region 1038690..1038712 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1038948..1039119) /rpt_family="L1MB4" repeat_region complement(1039127..1039193) /rpt_family="tRNA-Ala-GCA" repeat_region complement(1039198..1039382) /rpt_family="L1MB4" repeat_region complement(1039368..1040542) /rpt_family="L1MB4" repeat_region 1040543..1040570 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1041254..1041311) /rpt_family="tRNA-Gly-GGG" repeat_region 1041896..1042124 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1042231..1042359) /rpt_family="MLT1C" repeat_region complement(1043402..1043451) /rpt_family="MLT1C" repeat_region 1043878..1044155 /gene="ST7" /rpt_family="L2" repeat_region 1045534..1045731 /gene="ST7" /rpt_family="L2" repeat_region 1046067..1046154 /gene="ST7" /rpt_family="L4" repeat_region complement(1046201..1046309) /rpt_family="L2" repeat_region complement(1047648..1048186) /rpt_family="MLT1E" repeat_region complement(1049232..1049302) /rpt_family="MIRb" repeat_region 1049790..1049809 /gene="ST7" /rpt_family="(TTTA)n" repeat_region 1050636..1050879 /gene="ST7" /rpt_family="L2" repeat_region complement(1051054..1051163) /rpt_family="L3b" repeat_region 1051652..1051679 /gene="ST7" /rpt_family="AT_rich" repeat_region 1053615..1053825 /gene="ST7" /rpt_family="L2" repeat_region 1054149..1054169 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1054325..1054585) /rpt_family="MLT2B1" repeat_region complement(1054692..1054754) /rpt_family="MLT2C2" repeat_region complement(1056767..1056979) /rpt_family="L1MC2" repeat_region complement(1056989..1058282) /rpt_family="L1MB4" repeat_region 1058283..1058350 /gene="ST7" /rpt_family="tRNA-Ala-GCY_" repeat_region complement(1058351..1058754) /rpt_family="L1MB4" repeat_region complement(1059088..1059273) /rpt_family="MIRb" repeat_region complement(1061296..1061402) /rpt_family="MIRm" repeat_region 1062157..1062327 /gene="ST7" /rpt_family="L2" repeat_region 1062328..1062415 /gene="ST7" /rpt_family="MER5A" repeat_region 1063917..1063953 /gene="ST7" /rpt_family="AT_rich" repeat_region 1064836..1064857 /gene="ST7" /rpt_family="AT_rich" repeat_region 1065646..1065690 /gene="ST7" /rpt_family="AT_rich" repeat_region 1066122..1066257 /gene="ST7" /rpt_family="MIR3" repeat_region complement(1066771..1066929) /rpt_family="MIRb" repeat_region 1068441..1068461 /gene="ST7" /rpt_family="AT_rich" repeat_region 1068626..1068652 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1068725..1068968) /rpt_family="L1MC2" repeat_region complement(1071199..1071565) /rpt_family="L1MC4" repeat_region complement(1072065..1072541) /rpt_family="L1M4c" repeat_region 1072897..1072935 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1073359..1073810) /rpt_family="L1M4c" repeat_region 1073882..1073904 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1073910..1073954) /rpt_family="L1MB4" repeat_region complement(1074317..1074474) /rpt_family="L1MB4" repeat_region complement(1076924..1076965) /rpt_family="MIRb" repeat_region 1078174..1078225 /gene="ST7" /rpt_family="AT_rich" repeat_region 1078880..1078909 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1080013..1080186) /rpt_family="MIR" repeat_region 1080339..1080519 /gene="ST7" /rpt_family="MIRb" repeat_region 1081229..1081322 /gene="ST7" /rpt_family="AT_rich" repeat_region 1081339..1081369 /gene="ST7" /rpt_family="(C)n" repeat_region 1081869..1081947 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1082189..1082311) /rpt_family="L1MC2" repeat_region 1082417..1082440 /gene="ST7" /rpt_family="(TG)n" repeat_region 1083195..1083364 /gene="ST7" /rpt_family="L1ME1" repeat_region complement(1083379..1083753) /rpt_family="L1M4c" repeat_region 1083845..1083871 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1084155..1086986) /rpt_family="L1M4c" repeat_region complement(1086995..1087180) /rpt_family="L1M4c" repeat_region complement(1087219..1087521) /rpt_family="L1MC2" repeat_region complement(1087788..1088569) /rpt_family="L1M4c" repeat_region 1090244..1090298 /gene="ST7" /rpt_family="(TGGA)n" repeat_region complement(1091074..1091129) /rpt_family="MIRb" repeat_region 1093106..1093143 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1094801..1094923) /rpt_family="L3" repeat_region complement(1094976..1096745) /rpt_family="L3" repeat_region 1097560..1097661 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1097939..1098169) /rpt_family="MIRb" repeat_region 1099698..1099719 /gene="ST7" /rpt_family="AT_rich" repeat_region 1100905..1101160 /gene="ST7" /rpt_family="MIR" repeat_region 1103278..1103305 /gene="ST7" /rpt_family="AT_rich" repeat_region 1103329..1103560 /gene="ST7" /rpt_family="MIRb" repeat_region 1103687..1103743 /gene="ST7" /rpt_family="(TA)n" repeat_region 1104662..1104879 /gene="ST7" /rpt_family="L2" repeat_region 1104886..1104985 /gene="ST7" /rpt_family="L2" repeat_region complement(1104982..1105112) /rpt_family="MIR" repeat_region 1105171..1105233 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1105336..1105812) /rpt_family="Charlie1b" repeat_region 1106379..1107560 /gene="ST7" /rpt_family="L1MB5" repeat_region complement(1107994..1108070) /rpt_family="MIRb" repeat_region 1108270..1108307 /gene="ST7" /rpt_family="MER105" repeat_region complement(1108368..1108437) /rpt_family="Charlie1" repeat_region complement(1108726..1108846) /rpt_family="L1MC3" repeat_region complement(1109097..1109154) /rpt_family="L1MC2" repeat_region complement(1109165..1109461) /rpt_family="L1MB4" misc_feature 1109896..1276658 /note="faa; AC145508.3; finished" repeat_region complement(1110560..1111570) /rpt_family="L1MB4" repeat_region 1112164..1112197 /gene="ST7" /rpt_family="AT_rich" repeat_region 1112209..1112241 /gene="ST7" /rpt_family="(CACCC)n" repeat_region complement(1113255..1113383) /rpt_family="L1MB4" repeat_region 1113400..1113422 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1113832..1114145) /rpt_family="L1MC2" repeat_region 1115421..1115501 /gene="ST7" /rpt_family="AT_rich" repeat_region 1115630..1118109 /gene="ST7" /rpt_family="L1MB4" repeat_region complement(1118418..1119287) /rpt_family="L1MB4" repeat_region complement(1119707..1122727) /rpt_family="L1MB4" repeat_region 1124768..1124798 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1125343..1125507) /rpt_family="HAL1" repeat_region 1125514..1125534 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1125890..1126075) /rpt_family="HAL1" repeat_region 1126077..1126160 /gene="ST7" /rpt_family="(TA)n" repeat_region complement(1126248..1126349) /rpt_family="L1MC2" repeat_region complement(1126392..1126585) /rpt_family="L1MB4" repeat_region 1127567..1127601 /gene="ST7" /rpt_family="AT_rich" repeat_region 1129932..1129957 /gene="ST7" /rpt_family="(T)n" repeat_region 1129963..1129989 /gene="ST7" /rpt_family="(TTTA)n" repeat_region 1133092..1133124 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1134233..1134287) /rpt_family="MER66-int" repeat_region 1134350..1134384 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1137758..1137950) /rpt_family="L1MB4" repeat_region 1138009..1138233 /gene="ST7" /rpt_family="HAL1" repeat_region 1138625..1138646 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1138647..1139111) /rpt_family="L2" repeat_region complement(1139112..1139397) /rpt_family="L2" repeat_region 1139401..1140146 /gene="ST7" /rpt_family="L2" repeat_region complement(1140206..1140566) /rpt_family="L2" repeat_region complement(1140653..1141141) /rpt_family="L2" repeat_region complement(1141382..1141710) /rpt_family="L4" repeat_region 1141963..1141986 /gene="ST7" /rpt_family="AT_rich" repeat_region 1142156..1142182 /gene="ST7" /rpt_family="(A)n" repeat_region 1142791..1143198 /gene="ST7" /rpt_family="L1MC2" repeat_region 1143236..1143759 /gene="ST7" /rpt_family="L1MC2" repeat_region 1146497..1146835 /gene="ST7" /rpt_family="L1MC2" repeat_region 1147048..1147203 /gene="ST7" /rpt_family="L1MC2" repeat_region complement(1147373..1147619) /rpt_family="L1ME3B" repeat_region complement(1147674..1147752) /rpt_family="L1ME3B" repeat_region 1147820..1147848 /gene="ST7" /rpt_family="AT_rich" repeat_region 1147858..1148024 /gene="ST7" /rpt_family="MER58A" repeat_region complement(1148264..1148397) /rpt_family="MIRb" repeat_region 1148593..1148650 /gene="ST7" /rpt_family="polypyrimidine" repeat_region 1148655..1148817 /gene="ST7" /rpt_family="CT-rich" repeat_region complement(1149190..1149329) /rpt_family="L3" repeat_region complement(1149518..1149862) /rpt_family="L2" repeat_region complement(1150028..1150244) /rpt_family="L1ME4a" repeat_region complement(1150755..1151428) /rpt_family="L2" repeat_region 1151532..1151552 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1151695..1151756) /rpt_family="tRNA-Ala-GCG" repeat_region 1153059..1153200 /gene="ST7" /rpt_family="L2" repeat_region 1153315..1153417 /gene="ST7" /rpt_family="L2" repeat_region 1153934..1153973 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1154410..1154678) /rpt_family="L3" repeat_region 1155191..1155218 /gene="ST7" /rpt_family="(TTTTTG)n" repeat_region 1157162..1157195 /gene="ST7" /rpt_family="AT_rich" repeat_region 1157232..1157270 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1158127..1158320) /rpt_family="MIR" repeat_region complement(1158393..1158460) /rpt_family="MIR" repeat_region complement(1158523..1158743) /rpt_family="MIRb" repeat_region complement(1159203..1159346) /rpt_family="MIR3" repeat_region 1159293..1159551 /gene="ST7" /rpt_family="MIR" repeat_region 1160899..1160933 /gene="ST7" /rpt_family="(TTTA)n" repeat_region 1162185..1162228 /gene="ST7" /rpt_family="(CAAAAA)n" repeat_region 1163725..1163745 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1165498..1165558) /rpt_family="L2" repeat_region complement(1166330..1166651) /rpt_family="L2" repeat_region 1167088..1167176 /gene="ST7" /rpt_family="L3" repeat_region 1167261..1167404 /gene="ST7" /rpt_family="L3" repeat_region 1167709..1167748 /gene="ST7" /rpt_family="(TAAA)n" repeat_region 1167756..1167797 /gene="ST7" /rpt_family="(CAAAAA)n" repeat_region 1168177..1168329 /gene="ST7" /rpt_family="MIR3" repeat_region 1168568..1168597 /gene="ST7" /rpt_family="AT_rich" repeat_region 1168700..1168891 /gene="ST7" /rpt_family="L3" repeat_region 1169105..1169206 /gene="ST7" /rpt_family="MIR" repeat_region 1169263..1169829 /gene="ST7" /rpt_family="L3" repeat_region 1169844..1169988 /gene="ST7" /rpt_family="L1ME1" repeat_region 1169999..1170048 /gene="ST7" /rpt_family="AT_rich" repeat_region 1173802..1174148 /gene="ST7" /rpt_family="L1MD2" repeat_region complement(1175022..1175509) /rpt_family="L1ME4a" repeat_region 1175872..1175899 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1177320..1177530) /rpt_family="L1MC2" repeat_region complement(1177575..1178033) /rpt_family="LTR53" repeat_region 1178670..1178690 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1180962..1181192) /rpt_family="L1MC2" repeat_region complement(1181202..1181523) /rpt_family="L1MB4" repeat_region 1182367..1182491 /gene="ST7" /rpt_family="MIRb" repeat_region 1182510..1182576 /gene="ST7" /rpt_family="tRNA-Ala-GCA" repeat_region complement(1183477..1183540) /rpt_family="L3" repeat_region 1184561..1184598 /gene="ST7" /rpt_family="AT_rich" repeat_region 1184603..1185025 /gene="ST7" /rpt_family="MLT1-int" repeat_region 1185087..1185283 /gene="ST7" /rpt_family="MLT1-int" repeat_region 1185807..1186009 /gene="ST7" /rpt_family="MLT1-int" repeat_region complement(1186614..1186643) /rpt_family="MIR" repeat_region 1186644..1186664 /gene="ST7" /rpt_family="(TA)n" repeat_region complement(1186665..1186819) /rpt_family="MIR" repeat_region complement(1188648..1188808) /rpt_family="L1M5" repeat_region 1189259..1189290 /gene="ST7" /rpt_family="AT_rich" repeat_region 1189676..1189700 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1190198..1190282) /rpt_family="L1M5" repeat_region 1190451..1190589 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1191003..1191046) /rpt_family="L2" repeat_region 1192678..1193137 /gene="ST7" /rpt_family="L2" repeat_region 1193501..1193671 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1193726..1194164) /rpt_family="L1MB5" repeat_region 1194568..1194598 /gene="ST7" /rpt_family="AT_rich" repeat_region complement(1194658..1195075) /rpt_family="L1MB5" repeat_region complement(1195780..1195973) /rpt_family="MIRb" repeat_region complement(1197067..1197417) /rpt_family="L1ME4a" repeat_region complement(1197540..1197708) /rpt_family="L3" repeat_region 1198837..1199038 /gene="ST7" /rpt_family="MER3" repeat_region complement(1200181..1200463) /rpt_family="L1MC1" repeat_region 1201032..1201059 /gene="ST7" /rpt_family="(CCCCCA)n" repeat_region 1204301..1204381 /gene="ST7" /rpt_family="(TA)n" repeat_region complement(1205092..1205251) /rpt_family="MIRb" repeat_region 1205506..1205657 /gene="ST7" /rpt_family="L1ME4a" repeat_region 1205663..1205740 /gene="ST7" /rpt_family="(TA)n" repeat_region 1205938..1205994 /gene="ST7" /rpt_family="MIRb" repeat_region complement(1207761..1207836) /rpt_family="L2" repeat_region 1207861..1207905 /gene="ST7" /rpt_family="(TATG)n" repeat_region complement(1208037..1208140) /rpt_family="MIR" repeat_region complement(1208339..1208508) /rpt_family="MIRb" repeat_region 1208505..1208544 /gene="ST7" /rpt_family="L2" repeat_region 1208581..1208686 /gene="ST7" /rpt_family="L2" repeat_region 1209185..1209244 /gene="ST7" /rpt_family="T-rich" repeat_region 1209369..1209396 /gene="ST7" /rpt_family="AT_rich" repeat_region 1210966..1210999 /gene="ST7" /rpt_family="(TTTTG)n" repeat_region 1214769..1215736 /gene="ST7" /rpt_family="L2" repeat_region complement(1215851..1216209) /rpt_family="L3" repeat_region complement(1216506..1216597) /rpt_family="MER5A" repeat_region complement(1216760..1216927) /rpt_family="MER5B" repeat_region complement(1218740..1218861) /rpt_family="MER105" repeat_region 1220330..1220372 /gene="ST7" /rpt_family="T-rich" repeat_region complement(1220389..1220677) /rpt_family="L1MC1" repeat_region 1221361..1221442 /gene="ST7" /rpt_family="L2" repeat_region 1224792..1224841 /rpt_family="L2" repeat_region complement(1224941..1225010) /rpt_family="L2" repeat_region complement(1225004..1225094) /rpt_family="MIR3" repeat_region complement(1225135..1225169) /rpt_family="L2" repeat_region complement(1227284..1227390) /rpt_family="MIRb" repeat_region 1228399..1228426 /rpt_family="AT_rich" repeat_region 1229133..1229172 /rpt_family="(CAAA)n" repeat_region 1229185..1229245 /rpt_family="tRNA-Ala-GCG" repeat_region complement(1229486..1229575) /rpt_family="L2" repeat_region complement(1230964..1231055) /rpt_family="MLT1C" repeat_region complement(1231216..1231382) /rpt_family="MLT1C" repeat_region complement(1232668..1232725) /rpt_family="L1M4" repeat_region 1232729..1232794 /rpt_family="MLT1D" repeat_region 1233057..1233161 /rpt_family="(CAAA)n" repeat_region complement(1233439..1233652) /rpt_family="MER20" repeat_region complement(1234020..1234542) /rpt_family="L1MC4" repeat_region 1234543..1234577 /rpt_family="(TA)n" repeat_region complement(1234578..1234969) /rpt_family="L1MC4" repeat_region 1235147..1235253 /rpt_family="GA-rich" repeat_region complement(1235484..1235711) /rpt_family="L1MC4" repeat_region complement(1237955..1238214) /rpt_family="L1M4" repeat_region 1238251..1238287 /rpt_family="AT_rich" repeat_region 1240123..1240153 /rpt_family="AT_rich" repeat_region 1240755..1241022 /rpt_family="L2" repeat_region 1241070..1241346 /rpt_family="L2" repeat_region 1241606..1241778 /rpt_family="L2" repeat_region complement(1241993..1242139) /rpt_family="MIRb" repeat_region complement(1242652..1242817) /rpt_family="MER5B" repeat_region complement(1244375..1244542) /rpt_family="LTR50" repeat_region complement(1244569..1244819) /rpt_family="LTR50" repeat_region complement(1244930..1245098) /rpt_family="MIRb" repeat_region complement(1245697..1245905) /rpt_family="Tigger7" repeat_region 1247352..1247386 /rpt_family="AT_rich" repeat_region 1249554..1249610 /rpt_family="MIRb" repeat_region complement(1251257..1251288) /rpt_family="L2" repeat_region complement(1251518..1251819) /rpt_family="MLT1J2" repeat_region complement(1252005..1252382) /rpt_family="L1MEe" repeat_region 1252428..1252539 /rpt_family="MLT1C" repeat_region complement(1252555..1252775) /rpt_family="L1MEe" repeat_region complement(1252828..1252906) /rpt_family="L3" repeat_region complement(1254670..1255479) /rpt_family="L1MEe" repeat_region 1255911..1255934 /rpt_family="AT_rich" repeat_region 1256615..1256638 /rpt_family="AT_rich" repeat_region 1257491..1257623 /rpt_family="MIRb" repeat_region 1257642..1258034 /rpt_family="MLT1B" repeat_region 1258158..1258251 /rpt_family="L2" repeat_region 1258322..1258406 /rpt_family="MIR3" repeat_region 1258495..1258523 /rpt_family="AT_rich" repeat_region 1260495..1260706 /rpt_family="MER20" repeat_region complement(1261408..1262307) /rpt_family="L1M3de" repeat_region 1266068..1266143 /rpt_family="MIR3" gene complement(1267217..1315564) /gene="WNT2" mRNA complement(join(1267217..1268346,1290889..1291153, 1306937..1307214,1312747..1312973,1315180..1315564)) /gene="WNT2" /product="wingless-type MMTV integration site family member 2 precursor" CDS complement(join(1268117..1268346,1290889..1291153, 1306937..1307214,1312747..1312973,1315180..1315262)) /gene="WNT2" /note="int-1 related protein; oncogene INT1-like 1; secreted growth factor; based on human NCBI RefSeq Accession Number NM_003391.1" /codon_start=1 /product="wingless-type MMTV integration site family member 2 precursor" /protein_id="ABI93632.1" /translation="MNAPLGGIWLWLPLLLTWLTPEVSSSWWYMRATGGSSRVMCDNV PGLVSRQRQLCHRHPDVMRAIGLGVAEWTAECQHQFRQHRWNCNTLDRDHSLFGRVLL RSSRESAFVYAISSAGVVFAITRACSQGELKSCSCDPKKKGTAKDSKGTFDWGGCSDN IDHGIKFARAFVDAKERKGKDARALMNLHNNRAGRKAVKRFLKQECKCHGVSGSCTLR TCWLAMADFRKTGDYLWRKYNGAIQVVMNQDGTGFTVANKRFKKPTKNDLVYFENSPD YCIRDRDAGSLGTAGRVCNLTSRGMDSCEVMCCGRGYDTSHVTRMTKCECKFHWCCAV RCQDCLEALDVHTCKAPKSADWAVPT" repeat_region 1269345..1269431 /rpt_family="MLT1K" repeat_region 1270526..1270636 /rpt_family="MIRb" repeat_region 1272068..1273056 /rpt_family="L1M4c" repeat_region 1273106..1273772 /rpt_family="L1M4" repeat_region 1274365..1274393 /rpt_family="AT_rich" repeat_region 1274417..1274509 /rpt_family="L1MC2" repeat_region 1274885..1274958 /rpt_family="MIRb" repeat_region complement(1274963..1275282) /gene="WNT2" /rpt_family="L2" repeat_region 1275354..1275654 /rpt_family="L1MB5" repeat_region 1275815..1276075 /rpt_family="L1ME3A" repeat_region complement(1276107..1276526) /gene="WNT2" /rpt_family="L2" repeat_region 1276527..1276565 /rpt_family="(TGGA)n" repeat_region complement(1276566..1276817) /gene="WNT2" /rpt_family="L2" misc_feature 1276659..1331284 /note="igz; AC150476.3; finished" repeat_region 1276819..1277334 /rpt_family="MLT1C" repeat_region complement(1277691..1277876) /gene="WNT2" /rpt_family="MLT1C" repeat_region 1278596..1278744 /rpt_family="(GGAA)n" repeat_region complement(1279013..1279235) /gene="WNT2" /rpt_family="MIRb" repeat_region 1279843..1280146 /rpt_family="MARNA" repeat_region 1281635..1281658 /rpt_family="AT_rich" repeat_region complement(1281932..1282047) /gene="WNT2" /rpt_family="MIR3" repeat_region 1282334..1282378 /rpt_family="(TA)n" repeat_region complement(1283057..1283802) /gene="WNT2" /rpt_family="L2" repeat_region 1284159..1284286 /rpt_family="L2" repeat_region 1285432..1285549 /rpt_family="MIRb" repeat_region complement(1286651..1286793) /gene="WNT2" /rpt_family="MIR3" repeat_region 1287533..1287727 /rpt_family="MIRb" repeat_region 1288042..1288506 /rpt_family="MLT1C" repeat_region 1288526..1288661 /rpt_family="MIRb" repeat_region 1288792..1288812 /rpt_family="AT_rich" repeat_region complement(1288994..1289116) /gene="WNT2" /rpt_family="MIR3" repeat_region 1290623..1290655 /rpt_family="(G)n" repeat_region 1290708..1290757 /rpt_family="(A)n" repeat_region complement(1291553..1291771) /gene="WNT2" /rpt_family="MIRb" repeat_region 1291775..1291802 /rpt_family="(A)n" repeat_region complement(1291886..1291952) /gene="WNT2" /rpt_family="MIRb" repeat_region complement(1292186..1292320) /gene="WNT2" /rpt_family="MIRb" repeat_region complement(1292391..1292713) /gene="WNT2" /rpt_family="L1MC2" repeat_region 1293999..1294040 /rpt_family="(CA)n" repeat_region 1295041..1295581 /rpt_family="MLT1L" repeat_region complement(1295922..1296089) /gene="WNT2" /rpt_family="MIRb" repeat_region 1296656..1297115 /rpt_family="L1M4" repeat_region complement(1298207..1298630) /gene="WNT2" /rpt_family="HAL1" repeat_region 1298631..1298667 /rpt_family="AT_rich" repeat_region complement(1299056..1299269) /gene="WNT2" /rpt_family="HAL1" repeat_region complement(1299432..1299580) /gene="WNT2" /rpt_family="HAL1" repeat_region 1299983..1300014 /rpt_family="AT_rich" repeat_region 1300624..1300644 /rpt_family="(TTTA)n" repeat_region 1301252..1301280 /rpt_family="(GAAAA)n" repeat_region complement(1301389..1301522) /gene="WNT2" /rpt_family="MIRb" repeat_region complement(1302976..1303034) /gene="WNT2" /rpt_family="L1ME4a" repeat_region complement(1303043..1303370) /gene="WNT2" /rpt_family="MLT1C" repeat_region 1303554..1303750 /rpt_family="MIR" repeat_region complement(1303900..1303969) /gene="WNT2" /rpt_family="MIRb" repeat_region 1304397..1304437 /rpt_family="L3b" repeat_region 1306210..1306342 /rpt_family="MIR3" repeat_region 1306983..1307002 /rpt_family="(TTTCC)n" repeat_region 1308095..1308133 /rpt_family="MIR" repeat_region 1308648..1308668 /rpt_family="AT_rich" repeat_region 1312043..1312093 /rpt_family="L2" repeat_region 1312471..1312649 /rpt_family="MIRm" repeat_region 1314659..1314705 /rpt_family="(TG)n" repeat_region 1314706..1314785 /rpt_family="(GA)n" repeat_region 1314818..1314849 /rpt_family="(CA)n" repeat_region 1315357..1315389 /rpt_family="GC_rich" repeat_region 1318718..1318867 /rpt_family="L1MEc" repeat_region 1319378..1319501 /rpt_family="L1MEc" repeat_region 1319627..1319905 /rpt_family="L1MC1" repeat_region 1319912..1319963 /rpt_family="AT_rich" repeat_region 1319971..1320622 /rpt_family="L1M4b" repeat_region 1321424..1321753 /rpt_family="L1MB8" repeat_region 1322131..1322180 /rpt_family="AT_rich" repeat_region 1322181..1322279 /rpt_family="L1M4b" repeat_region 1322386..1322618 /rpt_family="L1MD2" repeat_region 1323313..1323368 /rpt_family="(TAAA)n" repeat_region 1323370..1324098 /rpt_family="L1MEc" repeat_region 1324115..1324269 /rpt_family="L1MD2" repeat_region 1324277..1325132 /rpt_family="L1MD2" repeat_region 1325139..1325209 /rpt_family="tRNA-Ala-GCG" repeat_region 1325540..1325712 /rpt_family="L1MD2" repeat_region 1326060..1326491 /rpt_family="L1MD2" repeat_region complement(1326597..1326665) /rpt_family="tRNA-Ala-GCA" repeat_region 1327129..1327307 /rpt_family="L1MD2" repeat_region 1327686..1327720 /rpt_family="AT_rich" repeat_region 1327821..1329165 /rpt_family="L1MD2" repeat_region 1329585..1329630 /rpt_family="L1MD2" repeat_region 1330094..1330458 /rpt_family="L1MC2" repeat_region 1330475..1330499 /rpt_family="L1MD2" repeat_region 1330500..1330521 /rpt_family="(CAAAA)n" repeat_region 1330522..1331236 /rpt_family="L1MD2" repeat_region complement(1331256..1331402) /rpt_family="L1ME1" misc_feature 1331285..1426426 /note="fab; AC146536.3; finished" repeat_region 1331408..1331723 /rpt_family="MLT1D" repeat_region 1331725..1331932 /rpt_family="L1MD2" repeat_region 1331940..1332630 /rpt_family="L1ME3B" repeat_region complement(1332831..1333098) /rpt_family="MLT1H2" repeat_region 1333106..1333794 /rpt_family="L1ME3B" repeat_region 1333792..1334461 /rpt_family="L1ME3B" repeat_region 1334513..1335053 /rpt_family="L1ME3B" repeat_region 1335116..1335207 /rpt_family="L1ME3B" repeat_region complement(1335261..1335383) /rpt_family="LTR33" repeat_region complement(1335530..1335614) /rpt_family="LTR33" repeat_region 1335637..1335921 /rpt_family="L1ME3B" repeat_region complement(1335998..1336182) /rpt_family="MLT1J" repeat_region complement(1336963..1337367) /rpt_family="MLT1C" repeat_region complement(1337519..1337651) /rpt_family="MIRb" repeat_region 1339111..1339142 /rpt_family="(A)n" repeat_region 1339317..1339351 /rpt_family="AT_rich" repeat_region complement(1339568..1339641) /rpt_family="MIR3" repeat_region 1340403..1340432 /rpt_family="AT_rich" repeat_region complement(1340608..1340776) /rpt_family="L1MC2" repeat_region complement(1340784..1340890) /rpt_family="L1MC2" repeat_region complement(1340946..1341773) /rpt_family="L1MB4" repeat_region complement(1341851..1344766) /rpt_family="L1MEc" repeat_region 1344787..1344861 /rpt_family="T-rich" repeat_region complement(1346934..1347349) /rpt_family="L1MB5" repeat_region complement(1347365..1348334) /rpt_family="L1M4c" repeat_region 1349068..1349640 /rpt_family="L1M4b" repeat_region complement(1349642..1350083) /rpt_family="MLT2C1" repeat_region 1350084..1350269 /rpt_family="L1M4b" repeat_region 1350617..1350650 /rpt_family="AT_rich" repeat_region 1350657..1350732 /rpt_family="L1M4b" repeat_region 1350728..1351681 /rpt_family="L1MB4" repeat_region 1352162..1352508 /rpt_family="L1MC2" repeat_region 1352514..1352917 /rpt_family="L1MB8" repeat_region 1352926..1353596 /rpt_family="L1MB8" repeat_region 1353635..1354091 /rpt_family="L1MB8" repeat_region complement(1354515..1355251) /rpt_family="L1ME3" repeat_region complement(1355252..1355292) /rpt_family="MER58" repeat_region 1355312..1355729 /rpt_family="L2" repeat_region 1356104..1356440 /rpt_family="L2" repeat_region complement(1356461..1356540) /rpt_family="L2" repeat_region complement(1356945..1357136) /rpt_family="L2" repeat_region 1357707..1357735 /rpt_family="(TTTTG)n" gene complement(1358584..1469566) /gene="GASZ" mRNA complement(join(1358584..1359131,1362358..1362471, 1363305..1363410,1373480..1373589,1374713..1374769, 1375881..1375956,1376734..1376858,1379530..1379664, 1380153..1380264,1464178..1464289,1466238..1466360, 1468822..1468921,1469411..1469566)) /gene="GASZ" /product="GASZ" CDS complement(join(1358979..1359131,1362358..1362471, 1363305..1363410,1373480..1373589,1374713..1374769, 1375881..1375956,1376734..1376858,1379530..1379664, 1380153..1380264,1464178..1464289,1466238..1466360, 1468822..1468921,1469411..1469518)) /gene="GASZ" /note="similar to Fugu frank1 in GenBank Accession Number AJ271361; based on human NCBI RefSeq Accession Number NM_130768.1" /codon_start=1 /product="GASZ" /protein_id="ABI93633.1" /translation="MAAAVGLRGLAVAGGGESTDSEDDGWEIGYLDRASQKLTGLLPT EEKNETFKKALTTGDISLVEELLDSGISIDSSFRYGWTPLMYAASVANVELVRVLLDR GANASFDKDKQTILITACSARGSEEQILKCVELLLSRNADPNVACRRLMTPVMYAARA GHPQVVAVLVAYGAEVNTQDENGYTALTWAARQGHKNVILKLLELGADKMLQTKDGKT PSEIAKRNKHLEIFNFLSLSLNPLEGKLQQLTKEETICKLLTTVSDKEKDHIFSSYAA FEDLEIFLHGLGLEHMTDLLKERDITLRHLLTMRKDEFTKNGITSRDQQKILAALKEL EVEEIKFGELPEVAKLEISGDEFLNFLLKLNKQCGHLITAVQNIITELPVNSHKIVLE WASPQNFTSVCEELVSNVEDLSEEVCKLKDLIQKLQNERENDPTHIPSMDEVSSWNNR ILKRTAFTVCGFGFLLFICKLTFQRK" repeat_region 1359937..1359980 /rpt_family="AT_rich" repeat_region 1361011..1361063 /rpt_family="L2" repeat_region 1361285..1361326 /rpt_family="AT_rich" repeat_region 1361645..1361737 /rpt_family="(TTATA)n" repeat_region complement(1361882..1361995) /gene="GASZ" /rpt_family="L1M5" repeat_region 1362902..1362922 /rpt_family="AT_rich" repeat_region 1364134..1364269 /rpt_family="MLT1A0" repeat_region 1364270..1364358 /rpt_family="MLT1A0-int" repeat_region complement(1364430..1364576) /gene="GASZ" /rpt_family="L2" repeat_region 1364957..1365138 /rpt_family="MIRb" repeat_region 1365218..1365405 /rpt_family="Charlie4" repeat_region 1365692..1365868 /rpt_family="L1M5" repeat_region 1365909..1366081 /rpt_family="L1MC4" repeat_region 1366529..1366556 /rpt_family="AT_rich" repeat_region 1366960..1366987 /rpt_family="AT_rich" repeat_region complement(1367057..1367154) /gene="GASZ" /rpt_family="MER91C" repeat_region 1367263..1367567 /rpt_family="MLT1I" repeat_region complement(1367692..1368006) /gene="GASZ" /rpt_family="L1ME4a" repeat_region complement(1369143..1369183) /gene="GASZ" /rpt_family="MER5B" repeat_region complement(1369861..1369931) /gene="GASZ" /rpt_family="L3" repeat_region complement(1369935..1370233) /gene="GASZ" /rpt_family="L3" repeat_region 1370234..1370374 /rpt_family="MER33" repeat_region 1370489..1370523 /rpt_family="(CAAA)n" repeat_region complement(1370707..1370792) /gene="GASZ" /rpt_family="L3" repeat_region 1371324..1371820 /rpt_family="L1MDa" repeat_region 1372337..1373172 /rpt_family="L1MDa" repeat_region 1374601..1374655 /rpt_family="A-rich" repeat_region 1374988..1375048 /rpt_family="tRNA-Ala-GCY_" repeat_region complement(1375380..1375577) /gene="GASZ" /rpt_family="MIRb" repeat_region 1376456..1376479 /rpt_family="AT_rich" repeat_region 1376627..1376649 /rpt_family="AT_rich" repeat_region 1377121..1377149 /rpt_family="AT_rich" repeat_region 1378080..1378413 /rpt_family="L1MC2" repeat_region complement(1380639..1380691) /gene="GASZ" /rpt_family="L2" repeat_region 1381567..1381886 /rpt_family="L2" repeat_region 1381889..1382050 /rpt_family="L1M4" repeat_region complement(1382052..1382246) /gene="GASZ" /rpt_family="L1M4c" repeat_region complement(1382417..1382526) /gene="GASZ" /rpt_family="L1M4c" repeat_region 1382523..1383404 /rpt_family="L1MB4" repeat_region 1383422..1383529 /rpt_family="L1MC2" repeat_region 1383665..1383762 /rpt_family="L1MC2" repeat_region 1383777..1384786 /rpt_family="L1M4" repeat_region 1384960..1385130 /rpt_family="MIR" repeat_region 1385132..1385655 /rpt_family="LTR53" repeat_region complement(1385708..1385809) /gene="GASZ" /rpt_family="L2" repeat_region 1386658..1386679 /rpt_family="AT_rich" repeat_region complement(1386693..1387128) /gene="GASZ" /rpt_family="MLT2C2" repeat_region 1388416..1389084 /rpt_family="L2" repeat_region 1389144..1389211 /rpt_family="tRNA-Ala-GCY_" repeat_region complement(1389764..1390148) /gene="GASZ" /rpt_family="L1MEd" repeat_region complement(1390665..1390766) /gene="GASZ" /rpt_family="L1MC4" repeat_region complement(1390773..1390940) /gene="GASZ" /rpt_family="HAL1b" repeat_region 1391148..1391173 /rpt_family="AT_rich" repeat_region 1391817..1391953 /rpt_family="MLT1C" repeat_region complement(1391993..1392220) /gene="GASZ" /rpt_family="L1MEd" repeat_region 1392509..1392626 /rpt_family="MER20B" repeat_region 1392871..1392899 /rpt_family="AT_rich" repeat_region complement(1392964..1393134) /gene="GASZ" /rpt_family="L1MEd" repeat_region complement(1393488..1393849) /gene="GASZ" /rpt_family="L1M5" repeat_region 1394694..1395072 /rpt_family="Tigger7" repeat_region 1395996..1396036 /rpt_family="AT_rich" repeat_region 1397408..1397438 /rpt_family="AT_rich" repeat_region 1397532..1397767 /rpt_family="MIR" repeat_region complement(1398356..1398738) /gene="GASZ" /rpt_family="L1M3" repeat_region complement(1398829..1398947) /gene="GASZ" /rpt_family="MLT1C" repeat_region 1399444..1399639 /rpt_family="L1M5" repeat_region 1400007..1400055 /rpt_family="AT_rich" repeat_region 1400130..1400473 /rpt_family="L1MC2" repeat_region 1400580..1401374 /rpt_family="L1MB8" repeat_region complement(1401394..1401461) /gene="GASZ" /rpt_family="Charlie4" repeat_region 1401596..1402064 /rpt_family="L1MB8" repeat_region 1403109..1403430 /rpt_family="L1MC2" repeat_region 1403476..1404318 /rpt_family="L1MB8" repeat_region 1405124..1405153 /rpt_family="AT_rich" repeat_region 1405158..1405528 /rpt_family="L1MB8" repeat_region 1405576..1405790 /rpt_family="L1MB8" repeat_region 1405825..1405981 /rpt_family="L1MEe" repeat_region 1406370..1406397 /rpt_family="AT_rich" repeat_region 1406404..1408423 /rpt_family="L1MB8" repeat_region 1408428..1408881 /rpt_family="MLT2C2" repeat_region 1408882..1410623 /rpt_family="L1MB8" repeat_region 1410855..1411229 /rpt_family="L2" repeat_region 1411386..1411435 /rpt_family="T-rich" repeat_region 1411722..1411837 /rpt_family="L1MB8" repeat_region 1412973..1413894 /rpt_family="L1MEc" repeat_region 1414457..1414741 /rpt_family="L1MEc" repeat_region 1414766..1414923 /rpt_family="L1MEc" repeat_region 1416409..1416569 /rpt_family="L1MEc" repeat_region 1416689..1416732 /rpt_family="AT_rich" repeat_region 1416767..1417032 /rpt_family="L1MEc" repeat_region 1417031..1417416 /rpt_family="L1ME2" repeat_region 1420020..1420155 /rpt_family="L1MC" repeat_region 1420241..1420284 /rpt_family="A-rich" repeat_region complement(1420658..1420893) /gene="GASZ" /rpt_family="MIR" repeat_region 1420904..1421090 /rpt_family="L1ME4a" repeat_region 1421112..1421185 /rpt_family="(TATG)n" repeat_region 1422155..1422260 /rpt_family="L1MA9" repeat_region 1422359..1422435 /rpt_family="AT_rich" repeat_region complement(1422644..1422859) /gene="GASZ" /rpt_family="L1MB4" repeat_region 1423252..1423396 /rpt_family="MIRb" repeat_region 1424976..1425005 /rpt_family="AT_rich" repeat_region 1425633..1425918 /rpt_family="L1MEd" repeat_region 1426374..1426455 /rpt_family="(TTAGGG)n" misc_feature 1426427..1490840 /note="fac; AC146366.3; finished" repeat_region 1426457..1426543 /rpt_family="(GAGAA)n" repeat_region 1427063..1427360 /rpt_family="MER58B" repeat_region 1427423..1427773 /rpt_family="L1MB4" repeat_region 1428716..1428881 /rpt_family="L1MB4" repeat_region 1428880..1429374 /rpt_family="L1M4" repeat_region 1429848..1430438 /rpt_family="L1M4" repeat_region 1430459..1430645 /rpt_family="L1M4" repeat_region 1430638..1430710 /rpt_family="L1MB4" repeat_region 1431399..1431564 /rpt_family="L1MB4" repeat_region 1431574..1432036 /rpt_family="L1MC4" repeat_region 1432358..1432501 /rpt_family="HAL1b" repeat_region 1434652..1435714 /rpt_family="L1M4c" repeat_region 1435761..1436427 /rpt_family="L1M4" repeat_region 1436877..1436962 /rpt_family="L1MC1" repeat_region 1437021..1437046 /rpt_family="AT_rich" repeat_region 1437257..1437332 /rpt_family="(TA)n" repeat_region 1437542..1437569 /rpt_family="AT_rich" repeat_region 1437930..1438025 /rpt_family="L1M4c" repeat_region complement(1438326..1438782) /gene="GASZ" /rpt_family="L1M4" repeat_region 1438783..1438962 /rpt_family="MER20" repeat_region 1439677..1439880 /rpt_family="L1ME3A" repeat_region complement(1439883..1439961) /gene="GASZ" /rpt_family="MER81" repeat_region 1439963..1440269 /rpt_family="L1ME3A" repeat_region 1440472..1440580 /rpt_family="MIR" repeat_region 1441783..1441997 /rpt_family="L1MB4" repeat_region 1442284..1442808 /rpt_family="L1MB4" repeat_region 1443617..1443652 /rpt_family="AT_rich" repeat_region 1443743..1443769 /rpt_family="AT_rich" repeat_region complement(1443781..1444122) /gene="GASZ" /rpt_family="L1MC2" repeat_region 1445239..1445558 /rpt_family="L1MC2" repeat_region complement(1445875..1446146) /gene="GASZ" /rpt_family="L1MC2" repeat_region 1446619..1446640 /rpt_family="AT_rich" repeat_region 1447509..1447693 /rpt_family="L1MC2" repeat_region 1447706..1447787 /rpt_family="L1MB8" repeat_region 1447792..1447826 /rpt_family="(CAAAA)n" repeat_region 1449070..1450013 /rpt_family="L1MD3" repeat_region 1450053..1450662 /rpt_family="L1MD3" repeat_region 1450656..1451514 /rpt_family="L1MD3" repeat_region 1451132..1451687 /rpt_family="L1MB4" repeat_region 1452091..1452431 /rpt_family="L1M4c" repeat_region 1452886..1455419 /rpt_family="L1M4c" repeat_region 1455824..1455843 /rpt_family="(CAAA)n" repeat_region 1455853..1456255 /rpt_family="L1MB3" repeat_region 1456806..1456997 /rpt_family="L1MC2" repeat_region 1457549..1457651 /rpt_family="L1MC3" repeat_region 1459124..1459437 /rpt_family="L1MC2" repeat_region 1459344..1459496 /rpt_family="L1MC3" misc_feature 1459427..1459562 /note="single clone coverage" repeat_region 1460283..1460468 /rpt_family="L1MC2" repeat_region 1460760..1461127 /rpt_family="L1ME2" repeat_region 1461340..1461360 /rpt_family="(TAAA)n" repeat_region complement(1462492..1462660) /gene="GASZ" /rpt_family="MER20" repeat_region 1464582..1464634 /rpt_family="MIR" repeat_region 1464967..1465037 /rpt_family="MIR3" repeat_region 1465374..1465395 /rpt_family="AT_rich" repeat_region 1466062..1466083 /rpt_family="AT_rich" repeat_region 1466597..1466627 /rpt_family="AT_rich" repeat_region 1466674..1466702 /rpt_family="AT_rich" repeat_region 1466891..1466939 /rpt_family="AT_rich" repeat_region complement(1467836..1467986) /gene="GASZ" /rpt_family="MIRb" repeat_region complement(1468229..1468384) /gene="GASZ" /rpt_family="MIRb" repeat_region 1468404..1468445 /rpt_family="(CA)n" repeat_region 1469540..1469570 /rpt_family="(CCGCG)n" repeat_region complement(1469969..1469999) /rpt_family="L3" repeat_region 1470145..1470202 /rpt_family="L1MC3" repeat_region 1470214..1470383 /rpt_family="L1MC2" repeat_region complement(1470872..1471053) /rpt_family="L2" repeat_region 1471057..1471283 /rpt_family="MIR" repeat_region complement(1471545..1471778) /rpt_family="MIR" repeat_region complement(1471792..1471996) /rpt_family="MIR" repeat_region complement(1472778..1473038) /rpt_family="L2" repeat_region complement(1473066..1473159) /rpt_family="L2" repeat_region 1473166..1473321 /rpt_family="MER5B" repeat_region complement(1473674..1473844) /rpt_family="L2" repeat_region complement(1473848..1474109) /rpt_family="L1M3" repeat_region 1474802..1474829 /rpt_family="AT_rich" repeat_region 1474848..1474917 /rpt_family="tRNA-Ala-GCY_" repeat_region 1475134..1475303 /rpt_family="L1MB7" repeat_region 1475567..1475599 /rpt_family="AT_rich" repeat_region 1475808..1475847 /rpt_family="AT_rich" repeat_region 1478164..1478195 /rpt_family="AT_rich" repeat_region 1478336..1478381 /rpt_family="(CA)n" repeat_region 1479152..1479191 /rpt_family="AT_rich" repeat_region complement(1479221..1479508) /rpt_family="L1MC2" repeat_region 1481205..1481530 /rpt_family="L1MC1" repeat_region 1481239..1481574 /rpt_family="L1MC2" repeat_region 1482214..1482244 /rpt_family="AT_rich" repeat_region 1482397..1482417 /rpt_family="AT_rich" repeat_region 1483695..1483733 /rpt_family="AT_rich" repeat_region complement(1484025..1484194) /rpt_family="MIR" repeat_region complement(1485722..1485907) /rpt_family="MIRb" repeat_region 1486343..1486509 /rpt_family="L2" repeat_region complement(1487261..1487470) /rpt_family="MIRb" repeat_region 1489309..1489919 /rpt_family="L1MB3" repeat_region complement(1490242..1490503) /rpt_family="L3" repeat_region 1490558..1491620 /rpt_family="L1ME3A" misc_feature 1490841..1573452 /note="igy; AC150475.2; finished" repeat_region 1491674..1491743 /rpt_family="MIRb" repeat_region complement(1491751..1491902) /rpt_family="L3" repeat_region complement(1491967..1492189) /rpt_family="L3" repeat_region 1492929..1494319 /rpt_family="L1MB3" repeat_region 1494429..1494488 /rpt_family="AT_rich" misc_feature 1494702..1494788 /note="single clone coverage" repeat_region 1496553..1496594 /rpt_family="AT_rich" repeat_region 1497658..1497748 /rpt_family="MLT1C" repeat_region 1497987..1498055 /rpt_family="AT_rich" repeat_region 1499659..1499872 /rpt_family="MIRb" repeat_region complement(1500968..1501055) /rpt_family="L1MC3" repeat_region 1501051..1501653 /rpt_family="L1MC3" repeat_region complement(1501656..1502379) /rpt_family="L1MC3" repeat_region complement(1502571..1502697) /rpt_family="MIR" repeat_region complement(1502904..1503258) /rpt_family="L1MC1" repeat_region complement(1503955..1504154) /rpt_family="L1MC1" repeat_region 1508346..1508582 /rpt_family="L4" repeat_region 1509031..1509060 /rpt_family="AT_rich" repeat_region complement(1509525..1509559) /rpt_family="L2" repeat_region 1509601..1509825 /rpt_family="MER20" repeat_region complement(1509851..1510018) /rpt_family="MIRb" repeat_region 1510334..1510362 /rpt_family="(TA)n" repeat_region 1511050..1511314 /rpt_family="MIR" repeat_region 1512026..1512197 /rpt_family="MIRb" repeat_region 1513757..1513878 /rpt_family="GA-rich" gene 1513996..1715600 /gene="CFTR" mRNA join(1513996..1514185,1551503..1551613,1556144..1556252, 1571662..1571877,1575062..1575151,1575988..1576151, 1576935..1577060,1581850..1582096,1584220..1584312, 1590339..1590521,1599916..1600107,1622432..1622526, 1626232..1626318,1627789..1628515,1630727..1630855, 1641627..1641664,1642139..1642389,1646037..1646116, 1651567..1651717,1652626..1652853,1655788..1655888, 1674525..1674776,1681930..1682085,1691090..1691179, 1711255..1711427,1712057..1712162,1713917..1715600) /gene="CFTR" /product="cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)" CDS join(1514133..1514185,1551503..1551613,1556144..1556252, 1571662..1571877,1575062..1575151,1575988..1576151, 1576935..1577060,1581850..1582096,1584220..1584312, 1590339..1590521,1599916..1600107,1622432..1622526, 1626232..1626318,1627789..1628515,1630727..1630855, 1641627..1641664,1642139..1642389,1646037..1646116, 1651567..1651717,1652626..1652853,1655788..1655888, 1674525..1674776,1681930..1682085,1691090..1691179, 1711255..1711427,1712057..1712162,1713917..1714117) /gene="CFTR" /note="CFTR/MRP; based on human NCBI RefSeq Accession Number NM_000492.2" /codon_start=1 /product="cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)" /protein_id="ABI93634.1" /translation="MQRSPLEKASVISKLFFSWTRPILRKGYRQRLELSDIYQIPSAD SADNLSEKLEREWDRELASKKNPKLINALRRCFFWRFTFYGIILYLGEVTKAVQPLLL GRIIASYDPDNKVERSIAIYLAVGLCLLFVVRTLLLHPAIFGLHHIGMQMRIAMFSLI YKKTLKLSSRVLDKISIGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVTLLMGLLWDL LQASAFSGLGVLIILACFQAGFGRMMMKYRDQRAGKINERLVITSEMIENIQSVKAYC WEEALEKMIENFRQSELRLTRKAAYVRYFNSSAFFFSGFFVVFLSVLPYALIKGIILR KIFTTISFCIVLRMAVTRQFPWAVQTWYDSLGAINKIQDFLQKQEYKSLEYNLTTTDV VMETVTAFWEERFGELFEKAKQNNNNRKISNVDNSLFFSNFSLLGTPVLKDINFKIER GQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIF GVCYDEYRYRSVIKACQLVEDISKFAEKDNTVLGEGGITLSGGQRARISLARAVYKDA DLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSS YFYGTFSELQNLRPDFSSKLMGYDSFDQFSAERRNSIITETLRRFSLEGDAAHSWNET KKQSFKQTGEFGEKRKNSILNPINSLRRISITQKTPLPMNGIDEDSGETLERRLSLVP DCEQGEGILPRSNLINTGPTLQRGRRQSVLNLMTHSSGNQGQNIHRRTTAFTRKMSLA PQANLVEMDIYSRRLSQDSGLEISEEINEEDLKECFLDDVESIPAVTTWNTYLRYITV HKRLIFVLIWCFVVFLIEVAASLVLLCLLSKVSPEDKGNTTKSANDSSAVIITSTSSF YFLYIYVGVADTFLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGG ILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSILKPYIFLATVPVIVAFVLL RAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFEALFHKALNLHTA NWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGTVGIILTLAMNIMSTLQW AVNSSIDVDSLMRSVSRVFKFVDIPTEENKPTKSIKLPKDGQLSKVMIIENQHVKKDD IWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRL LNTKGEIQIDGVSWDSITLQEWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDQEIWKV ADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHL DPITYQIIRRTLKQAFADCTVILCEHRIEAMLECQRFLVIEENKVRQYDSIQRLLSEK SLFRQAISPSDRVKLFPHQNSGKHKSRSKITALKEETEEEVQDTRL" repeat_region 1514577..1514619 /gene="CFTR" /rpt_family="MIRm" repeat_region 1515855..1516051 /gene="CFTR" /rpt_family="MIRb" repeat_region 1517133..1517714 /gene="CFTR" /rpt_family="MARNA" repeat_region complement(1520001..1520291) /rpt_family="L2" repeat_region complement(1520350..1520586) /rpt_family="L2" repeat_region complement(1521413..1521470) /rpt_family="MER94" repeat_region 1522937..1522957 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1522998..1523075) /rpt_family="Charlie10" repeat_region complement(1523076..1523252) /rpt_family="Charlie10" repeat_region 1523429..1523450 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1523701..1523765 /gene="CFTR" /rpt_family="MIRm" repeat_region 1524872..1524933 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1524950..1524985 /gene="CFTR" /rpt_family="(C)n" repeat_region 1526600..1526722 /gene="CFTR" /rpt_family="MER5A" repeat_region 1528371..1528400 /gene="CFTR" /rpt_family="(GGGA)n" repeat_region complement(1529278..1529386) /rpt_family="MER5B" repeat_region complement(1529962..1530085) /rpt_family="MER5B" repeat_region 1531153..1531424 /gene="CFTR" /rpt_family="Kanga1" repeat_region 1531686..1531707 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1532386..1532667 /gene="CFTR" /rpt_family="MIRb" repeat_region 1532671..1532696 /gene="CFTR" /rpt_family="(CAG)n" repeat_region 1536463..1536484 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1536730..1536762 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1537282..1537341) /rpt_family="L1MB8" repeat_region 1537733..1538518 /gene="CFTR" /rpt_family="L1MB8" repeat_region 1538519..1538547 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1538936..1539172) /rpt_family="L1M4" repeat_region 1539204..1539440 /gene="CFTR" /rpt_family="MIRb" repeat_region complement(1539553..1539650) /rpt_family="MIRb" repeat_region 1541924..1541947 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1542125..1542482) /rpt_family="MLT1B" repeat_region 1543066..1543487 /gene="CFTR" /rpt_family="MER63B" repeat_region 1543561..1543585 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1543796..1543816 /gene="CFTR" /rpt_family="(TTA)n" repeat_region complement(1543930..1544023) /rpt_family="L1MC2" repeat_region 1544047..1544074 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1544429..1544474 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1544479..1544768) /rpt_family="L1MC1" repeat_region complement(1546460..1546658) /rpt_family="L1MC2" repeat_region complement(1547001..1547743) /rpt_family="L1M4c" repeat_region 1549170..1549297 /gene="CFTR" /rpt_family="MIRb" repeat_region 1550299..1550568 /gene="CFTR" /rpt_family="L1MC2" repeat_region 1550569..1550593 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1550715..1550753 /gene="CFTR" /rpt_family="(TTC)n" repeat_region complement(1552015..1552176) /rpt_family="MIRb" repeat_region complement(1552225..1552371) /rpt_family="MLT1K" repeat_region 1552891..1553019 /gene="CFTR" /rpt_family="L2" repeat_region complement(1554225..1554300) /rpt_family="Charlie4" repeat_region 1554354..1554392 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1554787..1555021) /rpt_family="Charlie4" repeat_region complement(1558463..1558669) /rpt_family="MIRb" repeat_region complement(1559553..1559623) /rpt_family="tRNA-Ala-GCY_" repeat_region 1559647..1559685 /gene="CFTR" /rpt_family="(TTTG)n" repeat_region 1560524..1560557 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1561386..1561474) /rpt_family="MER5B" repeat_region 1561963..1562092 /gene="CFTR" /rpt_family="MIR3" repeat_region 1562239..1562470 /gene="CFTR" /rpt_family="MIR" repeat_region 1562834..1562853 /gene="CFTR" /rpt_family="(TG)n" repeat_region 1563208..1563276 /gene="CFTR" /rpt_family="tRNA-Ala-GCY_" repeat_region complement(1563493..1563667) /rpt_family="L1ME4a" repeat_region complement(1563686..1564011) /rpt_family="L1ME4a" repeat_region complement(1564021..1564300) /rpt_family="L1MD" repeat_region complement(1564549..1564658) /rpt_family="L2" repeat_region complement(1564659..1564730) /rpt_family="MLT1B" repeat_region complement(1565221..1565538) /rpt_family="L1M4" repeat_region 1565613..1565640 /gene="CFTR" /rpt_family="(TTTA)n" repeat_region complement(1566049..1566486) /rpt_family="L1M4" repeat_region complement(1567726..1567870) /rpt_family="MIR3" repeat_region 1569864..1570212 /gene="CFTR" /rpt_family="L1ME3B" repeat_region 1571153..1571231 /gene="CFTR" /rpt_family="MARNA" repeat_region 1571234..1571335 /gene="CFTR" /rpt_family="MIRb" repeat_region 1573043..1573063 /gene="CFTR" /rpt_family="AT_rich" misc_feature 1573453..1677941 /gene="CFTR" /note="fad; AC145506.1; finished" repeat_region 1576562..1576786 /gene="CFTR" /rpt_family="MIRb" repeat_region 1577581..1577862 /gene="CFTR" /rpt_family="L1MC2" repeat_region complement(1579323..1579480) /rpt_family="MIRb" repeat_region 1579674..1579740 /gene="CFTR" /rpt_family="Charlie4" repeat_region complement(1580301..1581220) /rpt_family="L1MB4" repeat_region 1581333..1581354 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1581604..1581796) /rpt_family="MIRb" repeat_region 1581828..1581848 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1582823..1582942 /gene="CFTR" /rpt_family="Charlie8" repeat_region 1583009..1583090 /gene="CFTR" /rpt_family="GA-rich" repeat_region 1584046..1584095 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1584590..1584800 /gene="CFTR" /rpt_family="MIRb" repeat_region complement(1585406..1585619) /rpt_family="MIRb" repeat_region 1586891..1587167 /gene="CFTR" /rpt_family="L2" repeat_region complement(1587154..1587330) /rpt_family="MIRb" repeat_region complement(1587390..1587441) /rpt_family="MIR" repeat_region 1587543..1588282 /gene="CFTR" /rpt_family="L1ME4a" repeat_region 1588415..1588592 /gene="CFTR" /rpt_family="L2" repeat_region 1588735..1588761 /gene="CFTR" /rpt_family="(TAAA)n" repeat_region complement(1588882..1589025) /rpt_family="Charlie2a" repeat_region complement(1589026..1589153) /rpt_family="Charlie2a" repeat_region complement(1589308..1589375) /rpt_family="tRNA-Ala-GCY_" repeat_region complement(1589447..1589732) /rpt_family="Charlie2a" repeat_region 1589905..1590074 /gene="CFTR" /rpt_family="MIRb" repeat_region 1590740..1590810 /gene="CFTR" /rpt_family="MIR" repeat_region 1590811..1590846 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1591576..1591804 /gene="CFTR" /rpt_family="L3b" repeat_region 1592678..1592722 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1592744..1593086 /gene="CFTR" /rpt_family="L1ME4a" repeat_region complement(1594040..1595321) /rpt_family="L1MC4a" repeat_region complement(1595828..1595981) /rpt_family="L2" repeat_region complement(1595998..1596790) /rpt_family="L2" repeat_region 1596845..1596927 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1596940..1597129) /rpt_family="L1M5" repeat_region 1597516..1597543 /gene="CFTR" /rpt_family="(TTTA)n" repeat_region complement(1598234..1598562) /rpt_family="L1M5" repeat_region complement(1598568..1598670) /rpt_family="L1M5" repeat_region 1599098..1599456 /gene="CFTR" /rpt_family="L2" repeat_region 1599443..1599619 /gene="CFTR" /rpt_family="MIR" repeat_region 1599733..1599785 /gene="CFTR" /rpt_family="MIRm" repeat_region 1600296..1600325 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1601727..1601870) /rpt_family="L1MC2" repeat_region complement(1602161..1602372) /rpt_family="L1MB8" repeat_region complement(1602409..1602538) /rpt_family="L2" repeat_region 1602816..1602903 /gene="CFTR" /rpt_family="MIRb" repeat_region complement(1603197..1603754) /rpt_family="L2" repeat_region 1603823..1603901 /gene="CFTR" /rpt_family="MIRb" repeat_region 1603939..1603985 /gene="CFTR" /rpt_family="(TAG)n" repeat_region complement(1606797..1606874) /rpt_family="MIRb" repeat_region complement(1607693..1608052) /rpt_family="L2" repeat_region 1608053..1608228 /gene="CFTR" /rpt_family="L1M" repeat_region complement(1608479..1608654) /rpt_family="L2" repeat_region 1608784..1608812 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1609313..1609417) /rpt_family="MIRb" repeat_region 1611055..1611138 /gene="CFTR" /rpt_family="CT-rich" repeat_region complement(1611942..1612097) /rpt_family="MER5A" repeat_region complement(1613278..1613863) /rpt_family="L1ME3B" repeat_region 1613902..1614335 /gene="CFTR" /rpt_family="LTR16B" repeat_region complement(1614368..1614506) /rpt_family="L1ME3B" repeat_region complement(1614746..1615022) /rpt_family="L1M4" repeat_region 1615034..1615067 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1615203..1615238 /gene="CFTR" /rpt_family="L2" repeat_region complement(1615332..1615707) /rpt_family="L2" repeat_region 1616135..1616297 /gene="CFTR" /rpt_family="(TA)n" repeat_region complement(1617554..1617631) /rpt_family="MIRb" repeat_region 1618986..1619014 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1619429..1619471 /gene="CFTR" /rpt_family="CT-rich" repeat_region 1620188..1620222 /gene="CFTR" /rpt_family="AT_rich" misc_feature 1620509..1620608 /gene="CFTR" /note="single clone coverage" misc_feature 1620800..1620849 /gene="CFTR" /note="single clone coverage" repeat_region 1620841..1620872 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1621112..1621233 /gene="CFTR" /rpt_family="L1MC3" repeat_region 1621234..1621361 /gene="CFTR" /rpt_family="MER5A" repeat_region complement(1621796..1621947) /rpt_family="MIRm" repeat_region complement(1623067..1623289) /rpt_family="MIRb" repeat_region 1623770..1623791 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1623854..1623882 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1624111..1624148 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1625036..1625287) /rpt_family="MLT1C" repeat_region complement(1625293..1625473) /rpt_family="MLT1C" repeat_region 1625876..1625903 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1626629..1626675 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1627431..1627564) /rpt_family="MIR3" repeat_region 1627646..1627681 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1629694..1629815 /gene="CFTR" /rpt_family="MIR3" repeat_region complement(1629943..1630072) /rpt_family="MIR" repeat_region complement(1631502..1631775) /rpt_family="MER102b" repeat_region 1632077..1632444 /gene="CFTR" /rpt_family="L2" repeat_region complement(1632466..1632883) /rpt_family="MLT1H2" repeat_region complement(1632953..1633142) /rpt_family="L2" repeat_region complement(1633168..1633242) /rpt_family="Charlie4" repeat_region complement(1633272..1633515) /rpt_family="Charlie4" repeat_region complement(1633523..1633773) /rpt_family="L2" repeat_region 1633864..1633917 /gene="CFTR" /rpt_family="CT-rich" repeat_region 1634252..1634441 /gene="CFTR" /rpt_family="MIR" repeat_region 1635146..1635166 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1635264..1635580) /rpt_family="L1M3" repeat_region complement(1635576..1635953) /rpt_family="L1MC2" repeat_region complement(1636270..1636673) /rpt_family="L1M3" repeat_region 1636674..1636703 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1636704..1637056) /rpt_family="L1MC2" repeat_region complement(1637309..1637683) /rpt_family="L1M3" repeat_region complement(1637685..1638176) /rpt_family="Tigger5" repeat_region complement(1640304..1640391) /rpt_family="L2" repeat_region complement(1643152..1643241) /rpt_family="MIR3" repeat_region 1643283..1643441 /gene="CFTR" /rpt_family="MIR" repeat_region complement(1644257..1644700) /rpt_family="L2" repeat_region 1644822..1644953 /gene="CFTR" /rpt_family="L2" repeat_region complement(1645257..1645716) /rpt_family="MLT1C" repeat_region 1647493..1647622 /gene="CFTR" /rpt_family="MIR3" repeat_region 1647906..1647926 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1650574..1650683) /rpt_family="MIR" repeat_region 1651123..1651401 /gene="CFTR" /rpt_family="L1MC1" repeat_region 1651408..1651460 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1653411..1653444 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1654547..1654578 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1654652..1654876 /gene="CFTR" /rpt_family="MIR" repeat_region 1655177..1655219 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1656089..1656514) /rpt_family="L1MC4" repeat_region complement(1656537..1657087) /rpt_family="L1MC4" repeat_region 1657588..1657976 /gene="CFTR" /rpt_family="MLT1D" repeat_region complement(1658088..1658180) /rpt_family="L1MC" repeat_region 1658182..1658229 /gene="CFTR" /rpt_family="C-rich" repeat_region complement(1658313..1658416) /rpt_family="LTR16D" repeat_region 1659065..1659093 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1660483..1660506 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1660517..1660853) /rpt_family="L1MC2" repeat_region 1661266..1662134 /gene="CFTR" /rpt_family="L2" repeat_region complement(1662775..1663181) /rpt_family="MLT1B" repeat_region 1663971..1664137 /gene="CFTR" /rpt_family="MIR3" repeat_region 1664434..1664501 /gene="CFTR" /rpt_family="MIR" repeat_region 1664511..1664656 /gene="CFTR" /rpt_family="MER5B" repeat_region 1664833..1664858 /gene="CFTR" /rpt_family="(TAAA)n" repeat_region complement(1664867..1664906) /rpt_family="MER5B" repeat_region 1664907..1664959 /gene="CFTR" /rpt_family="MIR3" repeat_region complement(1664960..1665077) /rpt_family="MER58B" repeat_region complement(1665068..1665123) /rpt_family="MER58B" repeat_region complement(1667723..1667789) /rpt_family="Charlie4" repeat_region 1668333..1668365 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1668469..1668552) /rpt_family="L2" repeat_region 1668560..1668729 /gene="CFTR" /rpt_family="MER69A" repeat_region complement(1670174..1670312) /rpt_family="MLT1C" repeat_region 1670981..1671002 /gene="CFTR" /rpt_family="(A)n" repeat_region complement(1672221..1672361) /rpt_family="L1MB8" repeat_region 1672435..1672464 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1672472..1672839) /rpt_family="L1MC2" repeat_region 1673638..1673685 /gene="CFTR" /rpt_family="(TTCA)n" repeat_region complement(1676626..1676768) /rpt_family="MIRb" repeat_region complement(1676745..1676820) /rpt_family="MIRm" repeat_region 1676823..1676918 /gene="CFTR" /rpt_family="GA-rich" repeat_region 1677022..1677179 /gene="CFTR" /rpt_family="MER69A" repeat_region complement(1677363..1677515) /rpt_family="MER58B" misc_feature 1677942..1703498 /gene="CFTR" /note="iwp; AC156764.3; finished" repeat_region 1678101..1678229 /gene="CFTR" /rpt_family="L2" repeat_region 1679260..1679282 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1679981..1680069 /gene="CFTR" /rpt_family="MIR" repeat_region 1680312..1680351 /gene="CFTR" /rpt_family="(TCCA)n" repeat_region complement(1680361..1680548) /rpt_family="L2" repeat_region 1680654..1680734 /gene="CFTR" /rpt_family="L2" repeat_region 1680766..1680848 /gene="CFTR" /rpt_family="MER5C" repeat_region 1680842..1680953 /gene="CFTR" /rpt_family="Charlie10" repeat_region 1683300..1683321 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1683631..1683676 /gene="CFTR" /rpt_family="tRNA-Ala-GCA" repeat_region 1684727..1684911 /gene="CFTR" /rpt_family="MIR" repeat_region 1686418..1686525 /gene="CFTR" /rpt_family="MIRm" repeat_region 1686846..1686910 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1687145..1687204) /rpt_family="MIRm" repeat_region 1687367..1687568 /gene="CFTR" /rpt_family="L1MC2" repeat_region 1687611..1687674 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1687676..1687737 /gene="CFTR" /rpt_family="L1MB8" repeat_region 1687862..1688009 /gene="CFTR" /rpt_family="L1MB8" repeat_region complement(1688010..1688677) /rpt_family="L2" repeat_region complement(1688679..1688710) /rpt_family="MIRb" repeat_region 1689163..1689391 /gene="CFTR" /rpt_family="MIRb" repeat_region 1689778..1689806 /gene="CFTR" /rpt_family="(CA)n" repeat_region 1690738..1690779 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1692725..1693064) /rpt_family="L1MC2" repeat_region complement(1693520..1693646) /rpt_family="BLACKJACK" repeat_region 1696933..1697027 /gene="CFTR" /rpt_family="L4" repeat_region complement(1698265..1698399) /rpt_family="MER31-int" repeat_region 1698579..1698601 /gene="CFTR" /rpt_family="AT_rich" repeat_region complement(1699079..1699209) /rpt_family="MER31-int" repeat_region 1701584..1701674 /gene="CFTR" /rpt_family="MIRm" repeat_region 1701681..1702738 /gene="CFTR" /rpt_family="L2" repeat_region complement(1702755..1702894) /rpt_family="MIRb" misc_feature 1703499..1851958 /note="fae; AC145419.3; finished" repeat_region complement(1703585..1703921) /rpt_family="L1MC4" repeat_region complement(1704588..1704694) /rpt_family="L1MC2" repeat_region complement(1704736..1704805) /rpt_family="L1MC2" repeat_region complement(1704825..1704951) /rpt_family="L1MC2" repeat_region complement(1704983..1705284) /rpt_family="L1MB4" repeat_region complement(1705277..1706241) /rpt_family="L1M3b" repeat_region 1706242..1706302 /gene="CFTR" /rpt_family="(T)n" repeat_region 1706356..1706388 /gene="CFTR" /rpt_family="(C)n" repeat_region complement(1707267..1708606) /rpt_family="L1M3b" repeat_region 1709539..1709660 /gene="CFTR" /rpt_family="L2" repeat_region 1709770..1709851 /gene="CFTR" /rpt_family="L2" repeat_region 1710226..1710267 /gene="CFTR" /rpt_family="AT_rich" repeat_region 1710939..1711027 /gene="CFTR" /rpt_family="L2" repeat_region 1717316..1717578 /rpt_family="MLT1C" repeat_region complement(1717774..1718081) /rpt_family="L1MC5" repeat_region complement(1718104..1718716) /rpt_family="Tigger6" repeat_region 1718879..1718900 /rpt_family="(TG)n" repeat_region complement(1719067..1719211) /rpt_family="MIRb" repeat_region 1719481..1719945 /rpt_family="MLT1C" repeat_region 1720349..1720443 /rpt_family="MER103" repeat_region 1720782..1720881 /rpt_family="L2" repeat_region 1722622..1722981 /rpt_family="L1MC2" repeat_region 1722989..1723302 /rpt_family="L1MC2" repeat_region 1725324..1725579 /rpt_family="MLT2C2" repeat_region 1725580..1725599 /rpt_family="(CAGC)n" repeat_region 1725600..1725809 /rpt_family="MLT2C2" repeat_region 1726357..1726402 /rpt_family="AT_rich" repeat_region 1726695..1726742 /rpt_family="MIRb" repeat_region complement(1726800..1726880) /rpt_family="L2" repeat_region complement(1726882..1727076) /rpt_family="L2" repeat_region 1727086..1728336 /rpt_family="L1MB5" repeat_region complement(1728383..1729140) /rpt_family="L2" repeat_region 1729392..1729529 /rpt_family="L1M5" repeat_region 1729561..1729692 /rpt_family="MLT1C" repeat_region 1729735..1729763 /rpt_family="(TCTA)n" repeat_region 1730135..1730365 /rpt_family="MIR" repeat_region complement(1730515..1730700) /rpt_family="MLT1C" repeat_region 1730790..1731075 /rpt_family="MLT1-int" repeat_region 1731440..1731464 /rpt_family="AT_rich" repeat_region complement(1731465..1731642) /rpt_family="L1MC2" repeat_region complement(1731659..1731749) /rpt_family="L1MC2" repeat_region complement(1731793..1731901) /rpt_family="L1MB7" repeat_region complement(1731901..1731993) /rpt_family="L1MC2" repeat_region complement(1732224..1736207) /rpt_family="L1MB4" repeat_region complement(1736241..1737295) /rpt_family="L1MB4" repeat_region 1739147..1739203 /rpt_family="MIRb" repeat_region complement(1739498..1740217) /rpt_family="L2" repeat_region complement(1740264..1740716) /rpt_family="LTR16B" misc_feature 1742219..1742298 /note="single clone coverage" repeat_region 1743126..1743165 /rpt_family="AT_rich" repeat_region complement(1743195..1743299) /rpt_family="L1MC2" repeat_region 1743760..1743817 /rpt_family="Arthur1" repeat_region 1744086..1744261 /rpt_family="Arthur1" repeat_region complement(1744308..1744517) /rpt_family="L1MB8" repeat_region complement(1744870..1745127) /rpt_family="MLT1K" repeat_region complement(1745160..1745230) /rpt_family="Charlie4" repeat_region complement(1745260..1745503) /rpt_family="Charlie4" repeat_region complement(1745548..1745713) /rpt_family="MLT1K" repeat_region 1745721..1745909 /rpt_family="MIR3" repeat_region 1747046..1747120 /rpt_family="MIRm" repeat_region complement(1747466..1747766) /rpt_family="LTR52" repeat_region complement(1747770..1748171) /rpt_family="MLT1C" repeat_region complement(1748199..1748301) /rpt_family="LTR52-int" repeat_region complement(1748302..1748628) /rpt_family="LTR52-int" repeat_region complement(1748620..1748872) /rpt_family="HERVL74" repeat_region 1748875..1748908 /rpt_family="(TTTTA)n" repeat_region 1748912..1748934 /rpt_family="AT_rich" repeat_region 1749337..1749382 /rpt_family="(TTTA)n" repeat_region complement(1749733..1749883) /rpt_family="HERVL74" repeat_region 1749886..1750079 /rpt_family="MLT2F" repeat_region complement(1750191..1750402) /rpt_family="L1ME4a" repeat_region 1750688..1750978 /rpt_family="MLT2D" repeat_region 1751468..1751702 /rpt_family="L2" repeat_region complement(1752270..1754464) /rpt_family="L1ME1" repeat_region complement(1755082..1755149) /rpt_family="MIR3" repeat_region complement(1755398..1755588) /rpt_family="MIR" repeat_region 1755591..1755659 /rpt_family="MIRb" repeat_region 1757166..1757201 /rpt_family="AT_rich" repeat_region complement(1757461..1757541) /rpt_family="L1M5" repeat_region complement(1757541..1757842) /rpt_family="L1ME1" repeat_region 1757829..1758633 /rpt_family="L1MB4" repeat_region 1759032..1760145 /rpt_family="L1MB4" repeat_region 1760414..1760544 /rpt_family="L1MB8" repeat_region complement(1760582..1760692) /rpt_family="L1MC3" repeat_region complement(1760725..1761724) /rpt_family="L1MB4" repeat_region complement(1761734..1762051) /rpt_family="L1MB8" repeat_region 1762055..1762076 /rpt_family="AT_rich" repeat_region complement(1762077..1762236) /rpt_family="L1MC2" repeat_region complement(1762598..1762695) /rpt_family="L1MC2" repeat_region complement(1762719..1762824) /rpt_family="L1MB8" repeat_region complement(1762823..1762945) /rpt_family="L1MC2" repeat_region complement(1763612..1765199) /rpt_family="L1MB4" repeat_region complement(1765241..1766074) /rpt_family="L1MB4" repeat_region complement(1766138..1766278) /rpt_family="L1MB4" repeat_region complement(1767836..1768152) /rpt_family="L1M4c" repeat_region 1768423..1768538 /rpt_family="MIRb" repeat_region complement(1768568..1769804) /rpt_family="L1M4c" repeat_region 1769992..1770033 /rpt_family="(CAAA)n" repeat_region 1770045..1770106 /rpt_family="tRNA-Ala-GCY_" repeat_region 1770118..1770150 /rpt_family="(TCTG)n" repeat_region complement(1770435..1772407) /rpt_family="L1M4c" repeat_region complement(1773271..1773615) /rpt_family="L1MEc" repeat_region complement(1774013..1774952) /rpt_family="L1MEc" repeat_region complement(1774963..1775235) /rpt_family="L1M5" repeat_region 1775298..1775553 /rpt_family="L2" repeat_region 1775655..1775979 /rpt_family="LTR16C" repeat_region 1775986..1776386 /rpt_family="L2" repeat_region 1776407..1776549 /rpt_family="MER33" repeat_region 1776655..1776971 /rpt_family="L2" misc_feature 1781259..1781383 /note="single clone coverage" repeat_region 1785766..1785818 /rpt_family="(CCG)n" misc_feature 1787307..1787906 /note="single clone coverage" repeat_region 1787597..1787644 /rpt_family="AT_rich" repeat_region 1787879..1787905 /rpt_family="AT_rich" repeat_region complement(1787926..1788118) /rpt_family="L1MC2" repeat_region complement(1788122..1788461) /rpt_family="L1MB4" repeat_region complement(1788460..1790289) /rpt_family="L1MB4" repeat_region complement(1790347..1790453) /rpt_family="L1MC2" repeat_region complement(1790482..1790598) /rpt_family="L1MC2" repeat_region complement(1790614..1790715) /rpt_family="L1MB7" repeat_region 1790774..1790794 /rpt_family="AT_rich" repeat_region complement(1791028..1791315) /rpt_family="L1MA9" repeat_region 1791329..1791356 /rpt_family="AT_rich" repeat_region complement(1791604..1793674) /rpt_family="L1MA9" repeat_region complement(1794292..1794662) /rpt_family="L1MA9" repeat_region complement(1794833..1796643) /rpt_family="L1MB4" repeat_region complement(1796961..1798004) /rpt_family="L1M2" repeat_region 1799397..1799529 /rpt_family="CT-rich" repeat_region complement(1800363..1800485) /rpt_family="L1MB4" repeat_region 1801757..1801781 /rpt_family="(TAAAAA)n" repeat_region complement(1801782..1802349) /rpt_family="L1MB4" repeat_region complement(1802376..1802730) /rpt_family="L1MC2" repeat_region complement(1803058..1804015) /rpt_family="L1MB4" repeat_region complement(1804718..1805727) /rpt_family="L1MB4" repeat_region 1805729..1805798 /rpt_family="MER105" repeat_region complement(1805803..1806530) /rpt_family="L1MB4" repeat_region complement(1806624..1808345) /rpt_family="L1M4c" repeat_region complement(1809047..1809279) /rpt_family="L1M4c" repeat_region complement(1810115..1810271) /rpt_family="MIRb" repeat_region complement(1810297..1810525) /rpt_family="MER112" gene complement(1811876..1982336) /gene="CORTBP2" mRNA complement(join(1811876..1813002,1818862..1818963, 1819825..1819957,1823815..1823878,1827723..1827908, 1828278..1828483,1830603..1830781,1838793..1838980, 1839137..1839289,1846752..1846851,1846935..1847021, 1855587..1855666,1856809..1856904,1859086..1859361, 1865275..1865392,1875002..1875256,1879686..1879836, 1887849..1887948,1889384..1889587,1895414..1897070, 1910081..1910305,1970897..1971004,1982162..1982336)) /gene="CORTBP2" /product="cortactin-binding protein 2" repeat_region 1812194..1812228 /rpt_family="AT_rich" repeat_region 1812418..1812444 /rpt_family="(TA)n" CDS complement(join(1812757..1813002,1818862..1818963, 1819825..1819957,1823815..1823878,1827723..1827908, 1828278..1828483,1830603..1830781,1838793..1838980, 1839137..1839289,1846752..1846851,1846935..1847021, 1855587..1855666,1856809..1856904,1859086..1859361, 1865275..1865392,1875002..1875256,1879686..1879836, 1887849..1887948,1889384..1889587,1895414..1897070, 1910081..1910305,1970897..1971004,1982162..1982245)) /gene="CORTBP2" /note="based on human NCBI RefSeq Accession Number NM_033427.1" /codon_start=1 /product="cortactin-binding protein 2" /protein_id="ABI93635.1" /translation="MATDGASCEPNFSRAPEDVGATAEAAVATKEFDVDTLSKSELRM LLSVMEGELEARDLVIEALRARRKEVFIQERYGRFNLNDPFLALQRDYEAGAGEKEKK PVCTNPLSILEAVMAHCRKMQERMSTQLAAAESRQKKLEMEKLQLQALEQEHKKLATR LEEERGKNKHVVLMLVKECKQLSGKVIEEAQKLEEVMTKLEEEKKKTNELEEELSAEK RRSTEMEAQLEKQLSEFDIEREQLRAKLNREEAHTTDLKEEIDKMKKMIEQLKRGNDS KPSLSLPRKTKDRRLVSISVGTEGPVTRSVACQTDLVIESTDHVKKLPLTVPVKPSTG SPLVSAPAKGNVCPSVPLLRPGIDRQASHGDLIVSSVPAVPPPNANRIEENGPSIGST PDLASSTPPLPSNAAPPTGQTSGIASQNYSQASSMHSLHSPCANASLHPGPNPRIQAA RFRFQGNANDQDQNGNTTQSPPSRDVSPTSRDNLVAKQLARNTVTQALSRFTSPQASA SPRPGAPPTGDIGTHPAVSRTSLKTPGLARVDRGNPPPIPPKKPGLSQAPSPPHPQLK AIMDSSRASNAGAKVDNKTVASPPASLPQGNRVINEENLPKSSSPQLPPKPSIDLTVA PAGCAVSALATSQVGARPAETPGPTQPACSDSSLVIPTTIAFRSSINPVSASASRPGA SDSLLVTASGWSPSLTPLLMSGGPAPLAGRPTLLQQAAAQGNVTLLSMLLNEEGLDIN YSCEDGHSALYSAAKNGHTDCVRLLLNAKAQIDAADKNGFTPLCAAAAQGHFECVELL IAYHANIDHAADGGQTPLYLACKNGNKECIKVLLEAGTDRSVKTRDGWTPVHAAVDTG NVDSLKLLMYHRAPTLGHSLNEEEPEPGAFDLDQGQEGSEGTAKPVVPTDLINHANRE GWTAAHIAASKGFKNCLEILCRHGGLEPERKDKCNRTVHDVATDDCKHLLENLNALKI PLRISVGETQPGSYGCDDFECENTICALNIHKQTSWDDFSKAVSQALTNHFQAISSDG WWSLEDMTFNNTPEPSIGLSARSILSITLGNVPWSAGQCFTQAPWDFMRKNKAEQVTV LLSGPQEGCLNSVTYASMIPLQMLQNYLRLVEQYHNVIFHGPEGSLQDYIAHQLALCM KHRQMAAGFSCEIVRAEVDAGFSKEQLIDLFINSACLIPVKQSPVTKKIIIILENLEK SSLSELLGDFLAPLENRSTESPCTFQKGNGTSECYYFHENCFLMGTIAKTCLQGSDLL VQQHFRWVQLRWDGEPMHGLLQRFLRRKVVNKFRGQAPSPCDPVCKMVDWALAVWHQL NSCLARLGTPDALLGPKYFLSCPVVPGHAQVTVKWMSKLWNAIIAPKVQEAILSRASV KRQPGLRQTTAKKPPSQGQQAVVKAALSILLNKAVLHGCPLLRAELDQYITDFKGGSF PLSIVSSYNSCSKKKGENGAWRKVSTNPRKKSGRFSSPTWSKPDLGEEGTKNKTMSQP NCNRIASLSKQKSSENDPSSMLNLDQRLSLGSDDEADLVKELQSMCSSKSESDISKIA DSRDDLRRFDSSENSPAFSAAINNLRMPVSQKEVSPVSSHQTTKRSTSTSKTELSVSR VKSFLPVPRSKVSQCSQNTKRSSSSSNTRQTELNNNSKEEIWNLCKNEQVQKPNK" repeat_region complement(1813359..1813482) /gene="CORTBP2" /rpt_family="L2" repeat_region complement(1813552..1813678) /gene="CORTBP2" /rpt_family="MIR3" repeat_region complement(1813851..1813984) /gene="CORTBP2" /rpt_family="MER5B" repeat_region 1814077..1814373 /rpt_family="L2" repeat_region 1814994..1815014 /rpt_family="(CAAAA)n" repeat_region 1816314..1816399 /rpt_family="MER5B" repeat_region complement(1816779..1816830) /gene="CORTBP2" /rpt_family="Charlie4" repeat_region complement(1816834..1817005) /gene="CORTBP2" /rpt_family="Charlie4" repeat_region 1820097..1820212 /rpt_family="MIRb" repeat_region 1822262..1823243 /rpt_family="L1M4c" repeat_region 1823242..1823493 /rpt_family="L1M4c" repeat_region 1824541..1824715 /rpt_family="MER112" repeat_region 1824893..1825298 /rpt_family="MLT1B" repeat_region 1825712..1825734 /rpt_family="(A)n" repeat_region 1827144..1827283 /rpt_family="L2" repeat_region 1829478..1829573 /rpt_family="LTR40a" repeat_region 1829630..1829810 /rpt_family="LTR40a" repeat_region 1830013..1830181 /rpt_family="L4" repeat_region complement(1830227..1830415) /gene="CORTBP2" /rpt_family="L4" repeat_region complement(1830984..1831126) /gene="CORTBP2" /rpt_family="MIRb" repeat_region 1831263..1831288 /rpt_family="(T)n" repeat_region 1832867..1832914 /rpt_family="AT_rich" repeat_region 1833026..1833046 /rpt_family="AT_rich" repeat_region 1833280..1833352 /rpt_family="MIR3" repeat_region 1834379..1834413 /rpt_family="AT_rich" repeat_region 1834444..1834511 /rpt_family="MIR3" repeat_region 1836050..1836126 /rpt_family="L2" repeat_region 1837771..1837846 /rpt_family="MLT1L" repeat_region complement(1838660..1838729) /gene="CORTBP2" /rpt_family="MIRb" repeat_region 1839340..1839477 /rpt_family="L1ME3B" repeat_region 1839508..1839931 /rpt_family="L1ME3B" repeat_region complement(1839995..1840127) /gene="CORTBP2" /rpt_family="MIR3" repeat_region 1841140..1841270 /rpt_family="MER5B" repeat_region complement(1843498..1843651) /gene="CORTBP2" /rpt_family="L2" repeat_region complement(1843848..1843916) /gene="CORTBP2" /rpt_family="tRNA-Ala-GCG" repeat_region 1844444..1844542 /rpt_family="L2" repeat_region 1845070..1845302 /rpt_family="MER102b" repeat_region 1845711..1845926 /rpt_family="MIR" repeat_region 1846441..1846527 /rpt_family="MIR" repeat_region complement(1847408..1847551) /gene="CORTBP2" /rpt_family="L1ME4a" repeat_region complement(1848977..1849139) /gene="CORTBP2" /rpt_family="HAL1" misc_feature 1851959..1971689 /note="faf; AC145448.3; finished" repeat_region 1853097..1853314 /rpt_family="MIR" repeat_region 1853330..1853467 /rpt_family="L2" repeat_region 1854550..1854708 /rpt_family="MIRb" repeat_region 1854908..1855204 /rpt_family="MLT1J" repeat_region 1856318..1856461 /rpt_family="MIR" repeat_region 1858278..1858465 /rpt_family="MIRb" repeat_region 1859457..1859492 /rpt_family="(CAAAA)n" repeat_region 1859679..1859707 /rpt_family="(A)n" repeat_region 1859831..1860041 /rpt_family="MIR" repeat_region 1860534..1861199 /rpt_family="L2" repeat_region 1861578..1861615 /rpt_family="AT_rich" repeat_region 1861724..1862194 /rpt_family="L2" repeat_region 1862241..1862562 /rpt_family="L2" repeat_region complement(1863011..1863270) /gene="CORTBP2" /rpt_family="L1ME4a" repeat_region complement(1863342..1863416) /gene="CORTBP2" /rpt_family="MIRm" repeat_region 1866027..1866603 /rpt_family="L1MB4" repeat_region 1866666..1866782 /rpt_family="L1MC2" repeat_region 1867076..1867128 /rpt_family="L1MEd" repeat_region complement(1867201..1867795) /gene="CORTBP2" /rpt_family="L1ME3A" repeat_region 1867798..1868018 /rpt_family="L1MEd" repeat_region 1868405..1868607 /rpt_family="MIRb" repeat_region complement(1869065..1869168) /gene="CORTBP2" /rpt_family="MIR" repeat_region 1869325..1869368 /rpt_family="(GGA)n" repeat_region complement(1869903..1870235) /gene="CORTBP2" /rpt_family="L2" repeat_region complement(1870599..1870764) /gene="CORTBP2" /rpt_family="L2" repeat_region complement(1871466..1871810) /gene="CORTBP2" /rpt_family="L2" repeat_region 1872175..1872284 /rpt_family="MIR3" repeat_region 1872633..1872770 /rpt_family="MIR3" repeat_region 1875939..1876113 /rpt_family="MER5A" repeat_region 1876355..1876381 /rpt_family="(TG)n" repeat_region complement(1878013..1878262) /gene="CORTBP2" /rpt_family="MIR" repeat_region 1878271..1878296 /rpt_family="(CACCAT)n" repeat_region 1878344..1878528 /rpt_family="L2" repeat_region 1878830..1879215 /rpt_family="L2" repeat_region complement(1879434..1879512) /gene="CORTBP2" /rpt_family="MIRb" repeat_region 1880587..1880676 /rpt_family="(CATA)n" repeat_region 1880895..1880922 /rpt_family="AT_rich" repeat_region 1881136..1881166 /rpt_family="AT_rich" repeat_region complement(1882118..1882772) /gene="CORTBP2" /rpt_family="L1M5" repeat_region complement(1882881..1883818) /gene="CORTBP2" /rpt_family="L1M4c" repeat_region 1885207..1885258 /rpt_family="AT_rich" repeat_region 1886102..1886124 /rpt_family="AT_rich" repeat_region 1886872..1887163 /rpt_family="L1MC1" repeat_region 1887174..1887237 /rpt_family="AT_rich" repeat_region complement(1887285..1887740) /gene="CORTBP2" /rpt_family="L1MB4" repeat_region 1890113..1890135 /rpt_family="AT_rich" repeat_region complement(1893799..1893988) /gene="CORTBP2" /rpt_family="MARNA" repeat_region complement(1894086..1894319) /gene="CORTBP2" /rpt_family="MIRb" repeat_region 1897721..1897864 /rpt_family="L2" repeat_region 1897883..1898035 /rpt_family="MER91A" repeat_region 1898072..1898231 /rpt_family="L2" repeat_region 1898499..1898817 /rpt_family="L1MC2" repeat_region 1899495..1899515 /rpt_family="AT_rich" repeat_region complement(1899645..1899757) /gene="CORTBP2" /rpt_family="MIR" repeat_region 1900495..1900516 /rpt_family="AT_rich" repeat_region 1900588..1900747 /rpt_family="MIRb" repeat_region 1900971..1901109 /rpt_family="L1MEb" repeat_region 1901173..1902086 /rpt_family="L1MEb" repeat_region 1902116..1902683 /rpt_family="L1MEb" repeat_region 1902684..1902748 /rpt_family="tRNA-Ala-GCA" repeat_region 1902749..1903368 /rpt_family="L1MEb" repeat_region 1903759..1903793 /rpt_family="AT_rich" repeat_region 1903798..1904268 /rpt_family="L1MEb" repeat_region 1904521..1904542 /rpt_family="AT_rich" repeat_region 1905040..1905079 /rpt_family="AT_rich" repeat_region 1906780..1906952 /rpt_family="LTR67" repeat_region 1909819..1909885 /rpt_family="Charlie4" repeat_region 1910607..1910653 /rpt_family="AT_rich" repeat_region complement(1912308..1912469) /gene="CORTBP2" /rpt_family="MER45A" repeat_region 1914028..1914047 /rpt_family="(TAAA)n" repeat_region complement(1916538..1916754) /gene="CORTBP2" /rpt_family="MIR" repeat_region 1917191..1917261 /rpt_family="L3" repeat_region 1917486..1917819 /rpt_family="L3" repeat_region complement(1918286..1918426) /gene="CORTBP2" /rpt_family="MLT1B" repeat_region complement(1919448..1919613) /gene="CORTBP2" /rpt_family="MER117" repeat_region 1920382..1920807 /rpt_family="MLT1C" repeat_region complement(1920812..1921023) /gene="CORTBP2" /rpt_family="L1M5" repeat_region complement(1921450..1922253) /gene="CORTBP2" /rpt_family="L1ME1" repeat_region complement(1922652..1923262) /gene="CORTBP2" /rpt_family="L1ME1" repeat_region 1923654..1923690 /rpt_family="AT_rich" repeat_region 1923749..1923787 /rpt_family="(TA)n" repeat_region complement(1923794..1923861) /gene="CORTBP2" /rpt_family="tRNA-Ala-GCG" repeat_region complement(1923910..1923978) /gene="CORTBP2" /rpt_family="tRNA-Ala-GCA" repeat_region complement(1924035..1925802) /gene="CORTBP2" /rpt_family="L1ME1" repeat_region complement(1925821..1926150) /gene="CORTBP2" /rpt_family="L1M5" repeat_region complement(1926587..1926862) /gene="CORTBP2" /rpt_family="HAL1b" repeat_region complement(1927106..1927264) /gene="CORTBP2" /rpt_family="MIR" repeat_region 1927493..1927513 /rpt_family="(T)n" repeat_region 1928128..1928327 /rpt_family="MIRb" repeat_region 1928591..1928631 /rpt_family="(CAAA)n" repeat_region 1928802..1928842 /rpt_family="AT_rich" repeat_region 1930247..1930271 /rpt_family="AT_rich" repeat_region 1930299..1930322 /rpt_family="(CAAAAA)n" repeat_region 1930509..1930559 /rpt_family="GA-rich" repeat_region 1934591..1934812 /rpt_family="L2" repeat_region 1935455..1935482 /rpt_family="MIRb" repeat_region 1937211..1937415 /rpt_family="MIR" repeat_region 1937753..1937903 /rpt_family="MLT1K" repeat_region 1937922..1937941 /rpt_family="(A)n" repeat_region 1938634..1938661 /rpt_family="(TA)n" repeat_region complement(1939501..1939677) /gene="CORTBP2" /rpt_family="MIRb" repeat_region 1940166..1940197 /rpt_family="AT_rich" repeat_region complement(1940984..1941495) /gene="CORTBP2" /rpt_family="Charlie1b" repeat_region 1942919..1942960 /rpt_family="AT_rich" repeat_region complement(1945528..1945621) /gene="CORTBP2" /rpt_family="MLT1D" repeat_region 1946411..1946479 /rpt_family="tRNA-Ala-GCY_" repeat_region 1946830..1947275 /rpt_family="MER70-int" repeat_region 1948182..1948308 /rpt_family="MER70-int" repeat_region 1950186..1950284 /rpt_family="MER70-int" repeat_region 1952338..1952742 /rpt_family="L4" repeat_region complement(1953149..1953298) /gene="CORTBP2" /rpt_family="MER5A" repeat_region 1953749..1953815 /rpt_family="tRNA-Thr-ACY_" repeat_region 1954157..1954276 /rpt_family="L1MB8" repeat_region 1954305..1954436 /rpt_family="L1MB8" repeat_region 1954495..1954678 /rpt_family="MIRb" repeat_region 1954707..1955144 /rpt_family="MLT1G1" repeat_region 1955837..1955976 /rpt_family="L2" repeat_region 1958123..1958244 /rpt_family="MIRb" repeat_region complement(1959247..1959306) /gene="CORTBP2" /rpt_family="MIRm" repeat_region complement(1959275..1959335) /gene="CORTBP2" /rpt_family="MIRb" repeat_region 1959950..1960223 /rpt_family="L1MC2" repeat_region 1961663..1961699 /rpt_family="AT_rich" repeat_region 1962291..1962346 /rpt_family="T-rich" repeat_region 1962622..1962673 /rpt_family="L2" repeat_region 1962750..1963002 /rpt_family="L2" repeat_region 1963611..1963822 /rpt_family="L2" repeat_region 1964872..1964900 /rpt_family="AT_rich" repeat_region 1965474..1965621 /rpt_family="MER20" repeat_region 1966365..1966391 /rpt_family="AT_rich" repeat_region 1966897..1966940 /rpt_family="AT_rich" repeat_region 1968496..1969053 /rpt_family="MER20B" repeat_region 1969054..1969122 /rpt_family="MIR3" repeat_region 1969587..1969613 /rpt_family="(CAAA)n" repeat_region 1969633..1969699 /rpt_family="tRNA-Ala-GCG" repeat_region 1971428..1971675 /rpt_family="Charlie8" misc_feature 1971690..2056961 /note="mfc; AC183482.3; finished" repeat_region 1972010..1972137 /rpt_family="L2" repeat_region complement(1972504..1972560) /gene="CORTBP2" /rpt_family="MIRb" repeat_region complement(1973076..1973233) /gene="CORTBP2" /rpt_family="MER5A" repeat_region 1973244..1973330 /rpt_family="MIRb" repeat_region 1973930..1973951 /rpt_family="AT_rich" repeat_region 1974139..1974165 /rpt_family="AT_rich" repeat_region 1975440..1975608 /rpt_family="MIR3" repeat_region complement(1977122..1977246) /gene="CORTBP2" /rpt_family="MIRb" repeat_region complement(1978378..1978437) /gene="CORTBP2" /rpt_family="L2" repeat_region 1982092..1982119 /rpt_family="GC_rich" repeat_region 1982415..1982467 /rpt_family="GC_rich" repeat_region 1983043..1983079 /rpt_family="(CA)n" repeat_region 1985312..1985332 /rpt_family="AT_rich" repeat_region 1986754..1986779 /rpt_family="AT_rich" repeat_region 1988002..1988198 /rpt_family="L1M4c" repeat_region 1988251..1988488 /rpt_family="L1M4c" repeat_region 1989003..1989690 /rpt_family="L1M4c" repeat_region 1989703..1989934 /rpt_family="L1MB8" repeat_region 1990054..1990172 /rpt_family="L1MB8" repeat_region 1990577..1990638 /rpt_family="L1M5" repeat_region complement(1990646..1990739) /rpt_family="L1M5" repeat_region 1991234..1991265 /rpt_family="(TTTTTG)n" repeat_region complement(1991702..1992151) /rpt_family="Charlie4a" repeat_region 1992432..1992594 /rpt_family="MIR" repeat_region 1993113..1993207 /rpt_family="Charlie8" repeat_region 1993614..1993751 /rpt_family="MLT1C" repeat_region 1994209..1994390 /rpt_family="MIRb" repeat_region 1995352..1995389 /rpt_family="AT_rich" repeat_region 1995975..1996010 /rpt_family="A-rich" repeat_region 1996757..1997030 /rpt_family="MLT1C" repeat_region 1997364..1997558 /rpt_family="MLT1C" repeat_region 1997758..1997800 /rpt_family="AT_rich" repeat_region 1999014..1999043 /rpt_family="(TTTTC)n" repeat_region complement(1999141..1999577) /rpt_family="L1MD" repeat_region 1999803..2000766 /rpt_family="L1MB4" repeat_region 2000778..2001005 /rpt_family="L1MB4" repeat_region 2001001..2001794 /rpt_family="L1MB4" repeat_region 2001831..2001958 /rpt_family="MER66-int" repeat_region 2002403..2003399 /rpt_family="L1MB4" repeat_region 2003405..2003638 /rpt_family="L1MC2" repeat_region 2003544..2003669 /rpt_family="L1MC3" repeat_region 2003683..2003711 /rpt_family="AT_rich" repeat_region 2003712..2004672 /rpt_family="L1MB4" repeat_region 2005285..2005646 /rpt_family="L1MC2" repeat_region 2005741..2005868 /rpt_family="T-rich" repeat_region 2007145..2007424 /rpt_family="L1MC2" repeat_region 2008424..2008486 /rpt_family="AT_rich" repeat_region 2008866..2009061 /rpt_family="MER58A" repeat_region 2009157..2009202 /rpt_family="(TA)n" repeat_region 2009537..2009770 /rpt_family="L1M4c" repeat_region 2010599..2012586 /rpt_family="L1M4c" repeat_region 2012978..2013009 /rpt_family="(TAAA)n" repeat_region 2013022..2013947 /rpt_family="L1M4c" repeat_region 2014313..2014846 /rpt_family="L1M4c" repeat_region 2014820..2014938 /rpt_family="L1MB4" repeat_region 2014934..2016373 /rpt_family="L1MB4" repeat_region 2016484..2016630 /rpt_family="L1MC2" repeat_region complement(2016760..2017095) /rpt_family="MLT1J" repeat_region 2017255..2017405 /rpt_family="L2" repeat_region 2019228..2019339 /rpt_family="(GAAA)n" repeat_region 2020263..2020384 /rpt_family="A-rich" repeat_region complement(2020507..2020650) /rpt_family="MER5A1" repeat_region complement(2021171..2021376) /rpt_family="MIRb" repeat_region complement(2021377..2021516) /rpt_family="MER5B" repeat_region complement(2021517..2021693) /rpt_family="MER20" repeat_region complement(2021695..2021725) /rpt_family="MER5B" repeat_region complement(2022331..2022399) /rpt_family="tRNA-Ala-GCG" repeat_region complement(2022496..2022615) /rpt_family="MER5A" repeat_region 2023502..2023774 /rpt_family="L2" repeat_region 2023854..2023971 /rpt_family="L2" misc_feature 2026504..2026973 /note="single clone coverage" repeat_region 2026616..2026647 /rpt_family="(G)n" repeat_region 2026670..2026701 /rpt_family="AT_rich" repeat_region complement(2027209..2027240) /rpt_family="MIR" repeat_region complement(2027245..2027421) /rpt_family="L2" repeat_region 2027558..2027618 /rpt_family="tRNA-Ala-GCG" repeat_region complement(2027780..2028014) /rpt_family="MLT1D" repeat_region complement(2028021..2028244) /rpt_family="MIRb" misc_feature 2028149..2028206 /note="single clone coverage" repeat_region 2028474..2028547 /rpt_family="MIRm" repeat_region 2028947..2028975 /rpt_family="AT_rich" repeat_region 2029162..2029195 /rpt_family="(CA)n" repeat_region 2030589..2030620 /rpt_family="AT_rich" repeat_region complement(2030894..2031027) /rpt_family="L1M4c" repeat_region 2031179..2031329 /rpt_family="MIRb" repeat_region 2033405..2033464 /rpt_family="AT_rich" repeat_region 2033568..2033589 /rpt_family="AT_rich" repeat_region 2033924..2034624 /rpt_family="L2" repeat_region 2034889..2034938 /rpt_family="L2" repeat_region 2035972..2036002 /rpt_family="AT_rich" repeat_region complement(2036115..2036334) /rpt_family="MIR" repeat_region complement(2036669..2036896) /rpt_family="MER58A" repeat_region 2037466..2037571 /rpt_family="MIR" repeat_region complement(2037954..2038055) /rpt_family="L1ME3B" repeat_region complement(2038109..2038405) /rpt_family="MER33" repeat_region complement(2038411..2038910) /rpt_family="L1ME3B" repeat_region complement(2038934..2038976) /rpt_family="L1M3" repeat_region 2039343..2039389 /rpt_family="AT_rich" repeat_region complement(2040719..2040976) /rpt_family="MLT1J1" repeat_region 2042100..2042439 /rpt_family="L1MC2" repeat_region complement(2043263..2043548) /rpt_family="MER33" repeat_region complement(2043910..2044009) /rpt_family="MLT1K" repeat_region complement(2044915..2045087) /rpt_family="MLT1C-int" repeat_region complement(2045088..2045156) /rpt_family="MLT2B1" repeat_region 2045167..2045472 /rpt_family="MLT2C1-int" repeat_region 2045473..2045825 /rpt_family="MLT2C1" repeat_region 2045827..2045877 /rpt_family="(CATATA)n" repeat_region 2046491..2046583 /rpt_family="(CATATA)n" repeat_region complement(2046647..2047006) /rpt_family="L1MC2" repeat_region complement(2047966..2048082) /rpt_family="L1MB8" repeat_region complement(2048441..2049241) /rpt_family="L1MB3" repeat_region 2049606..2049635 /rpt_family="AT_rich" repeat_region complement(2050155..2050375) /rpt_family="MIR" repeat_region 2051955..2052265 /rpt_family="L1MC2" repeat_region 2052266..2052304 /rpt_family="AT_rich" repeat_region 2052722..2052764 /rpt_family="A-rich" repeat_region 2053551..2053654 /rpt_family="MIRb" repeat_region 2054161..2054318 /rpt_family="L2" repeat_region 2055253..2055361 /rpt_family="L2" repeat_region 2055489..2055527 /rpt_family="(TG)n" repeat_region complement(2055639..2055768) /rpt_family="MLT1C" CONTIG join(AC146891.3:1..103926,AC145363.4:1..108040, AC145418.5:1..111211,AC145507.3:1..90518,AC156759.3:1..24411, AC145851.3:1..120832,AC146367.3:1..80596,AC156761.3:1..75791, gap(50000),AC161329.3:1..144874,gap(50000),AC173470.3:1..71141, AC164516.2:1..78555,AC145508.3:1..166763,AC150476.3:1..54626, AC146536.3:1..95142,AC146366.3:1..64414,AC150475.2:1..82612, AC145506.1:1..104489,AC156764.3:1..25557,AC145419.3:1..148460, AC145448.3:1..119731,AC183482.3:1..85272) //