LOCUS DF820492 133496 bp DNA linear CON 19-JUL-2014 DEFINITION Weissella oryzae SG25 DNA, scaffold: sequence09. ACCESSION DF820492 BAWR01000000 VERSION DF820492.1 DBLINK BioProject:PRJDB1101 BioSample:SAMD00000341 KEYWORDS WGS; STANDARD_DRAFT. SOURCE Weissella oryzae SG25 ORGANISM Weissella oryzae SG25 Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Weissella. REFERENCE 1 (bases 1 to 133496) AUTHORS Tohno,M. and Tanizawa,Y. TITLE Direct Submission JOURNAL Submitted (05-JUN-2014) to the DDBJ/EMBL/GenBank databases. Contact:Masanori Tohno National Agriculture and Food Research Organization, National Institute of Livestock and Grassland Science, Animal Feeding and Management Research Division; Senbonmatsu 768, Nasushiobara, Tochigi 329-2793, Japan REFERENCE 2 AUTHORS Tanizawa,Y., Fujisawa,T., Mochizuki,T., Kaminuma,E., Suzuki,Y., Nakamura,Y. and Tohno,M. TITLE Draft Genome Sequence of Weissella oryzae SG25T, Isolated from Fermented Rice Grains JOURNAL Genome Announc 2, e00667-14 (2014) REMARK Publication Status: Online-Only DOI:10.1128/genomeA.00667-14 COMMENT annotated by GenomeRefine ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.7, Velvet v. 1.2 Genome Coverage :: 2000X Sequencing Technology :: Roche 454, illumina HiSeq2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..133496 /db_xref="taxon:1329250" /mol_type="genomic DNA" /note="scaffold: sequence09" /note="type strain of Weissella Oryzae" /organism="Weissella oryzae SG25" /strain="SG25" regulatory 316..321 /locus_tag="WOSG25_090010" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 332..1426 /codon_start=1 /locus_tag="WOSG25_090010" /note="gene_1391" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31304.1" /transl_table=11 /translation="MAMFKKKYDDIEEQAPDMASMMNQVAQDGSFDLSSIPMVDNTSA SVNETITEQLNRVLSQNSLLITQIDQLQVLNGDLFKQINDWQGYRTEATNYINEINDQ HQAAVNELKQAHQADLEALNNEWTQKFDLKAQEVEQRYAAVEARISDSAQKQIEEKAL LQDSIVELRDQKTTLESQVKNNEAAINELQNKLDQAAEQSQQNELAKQQASEQFNQVW AQLSDATERLQLANEKIEGLTQENQKWSEQINTMKADSITEFQQTQKKTDAIISGLTD QVAQSNQQIQVIEGKYAVAVQRAVGLEANLQSLQEQNNLLVKQIRSMDGSDFKSARTS VPSFNNDFPSQQKESQPVADSEPVEQTEED" regulatory 1532..1537 /locus_tag="WOSG25_090020" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 1547..3766 /codon_start=1 /locus_tag="WOSG25_090020" /note="gene_1392" /note="identified by MetaGeneAnnotator; putative" /product="thiamine ABC transporter permease" /protein_id="GAK31305.1" /transl_table=11 /translation="MTEYIEIIDDRENNLKNISLRIPKKQITVFTGVSGSGKSSLVFD TLANESQRLLGETLPSFVRQFLPKYARPAVEAIRNLPASIVVDQKPLGGNVRSTLATV TDIAPVIRNMYAKLGQPKIGGVDYFSFNTAAGMCPVCQGIGRKTAVNLTKFIDESKSL NEGAVQFPPYKRVDVYTASGLFDNDKPIKDYTARERSQLLDGDATIGKVKMGSFNATY EGFLEKFNRNYLQREGEIPERTQKLISEYTHEERCDSCQGQRFAPKTLAVKVAGYNIA EMLAMQLTDLVTVLDQLAKADKAGIEILQEQVNHLIDLGLGYLTLDRATASLSGGESQ RVKLVKYLSNALTDMLYIFDEPSVGLHPDDISRINAIFLKLRDKGNTVIIIEHDPDVI KLADWVIELGPQAGVHGGQVMFEGTYAELLKSDTLTGQYLAQGKKYKDQPRPAKDFLI GLASSVHNLQAQQLKVPVGLLTVLTGVAGSGKSTLLASSFQAAYPELVYVDQNSLASN TRSNPATFIGIMDNIRKLLAKANDQPVGMFSYNSEGACEACGGRGYIESNLAFMETVK TTCEVCGGKRYKQVVLQYKFQEKNIVEILDLTVEEALEFFKKTAAIKKKIQAMNELGL GYLSLGQSTASLSGGEKQRLKLAAEFYQEGSIYVLDEPSTGLHLADIQNLLRIINHFV DNGNTVVVIEHQLDIIRQADWVIDLGPGAGTKGGKVVFAGPVKELLGNQNSVTAQYI" regulatory 3926..3931 /locus_tag="WOSG25_090030" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 3942..5537 /codon_start=1 /locus_tag="WOSG25_090030" /note="L-ribulokinase-like proteins; a subfamily of the FGGY family of carbohydrate kinases; cd07778" /note="MgATP binding site [chemical binding]" /note="Pfam: PF00370; InterPro: IPR000577" /note="Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]; COG1070" /note="catalytic site [active]" /note="gene_1393" /note="identified by MetaGeneAnnotator; putative" /note="metal binding site [ion binding]" /note="putative N- and C-terminal domain interface [polypeptide binding]" /note="putative active site [active]" /note="putative carbohydrate binding site [chemical binding]" /note="ribulokinase [Weissella paramesenteroides ATCC 33313]" /product="ribulokinase" /protein_id="GAK31306.1" /transl_table=11 /translation="MNTVQIKDEIVTGQTALGIELGSTNIKAVLIASDHSTIASGSFE WENQLVDGVWTYSLDLVWQGLQSAYRALANHIKAEYTVDLVSIKVIGISAMMHGYLPF DVEGNLLTPFRTWRNAMTEEAAAELTDLFAFNIPQRWSIAHLYQAILNDEEHLAKLDF ITTLAGYVHWQLTGEKVLGIGDASGVFPIDSAKKQYDADMLAKFNGLAQVTKQPWDLS AILPKLVLAGEQAGTLTVQGAKLIDPTGTLAAGSLFAGPEGDAGTGMVATNSVKQRTA NISAGTSAFAMVVLEKALKRVHTDIDMVTTPDGSAVAMVHTNNSSTDINYWVRLFDEF AKALGVDMPGAKLYPLLFNTVLGSDPDAGGMVSYGYYSGENITKVAEGRPMFIRTPKS NFTLGNLMRMNLYSAFGAMRLGLDVLSDEQVATDSVVAQGGIFKTPLVGQKILAAVMD APVTVMDTAGEGGPWGMAILAQYVIDSAGGLSLADYLDKLVFQNVKATTIAPDPADQA GFATFMENYQAALPLEQGAAQLL" regulatory 5537..5542 /locus_tag="WOSG25_090040" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 5551..6249 /codon_start=1 /locus_tag="WOSG25_090040" /note="Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II); cd00398" /note="L-ribulose-5-phosphate 4-epimerase [Lactobacillus rhamnosus GG]" /note="L-ribulose-5-phosphate 4-epimerase; Reviewed; PRK08193" /note="Zn2+ binding site [ion binding]" /note="gene_1394" /note="identified by MetaGeneAnnotator; putative" /note="intersubunit interface [polypeptide binding]" /note="strain coidentity: ATCC 53103 = GG; synonym: Lactobacillus rhamnosus ATCC 53103" /product="L-ribulose-5-phosphate 4-epimerase" /protein_id="GAK31307.1" /transl_table=11 /translation="MLEDLKQKVYDANMALPKHDLIKFTWGNVSQIDRESGLFVIKPS GVDYDELTPADMVVVDLDGKVVEGKLNPSSDTETHRILYKTFKNIGGIVHTHSPWAVA FAQAEMDIPAAGTTHADTFYGDVPVSNVMTADEINGEYELATGEVIIKTFAERGIDPD QVPAVLVHDHGPFVWGADAAKAVYNSVVLEEVAKMAYHTMMLKRGNIRMNQTLLDKHY LRKHGANAYYGQPK" regulatory 6333..6338 /locus_tag="WOSG25_090050" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 6347..7192 /codon_start=1 /locus_tag="WOSG25_090050" /note="2,5-didehydrogluconate reductase [Lactobacillus buchneri ATCC 11577]" /note="Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance to both health and industrial...; cd06660" /note="Aldo/keto reductase family; pfam00248" /note="COG: COG0656; Pfam: PF00248; InterPro: IPR001395" /note="catalytic tetrad [active]" /note="gene_1395" /note="identified by MetaGeneAnnotator; putative" /product="gluconate 5-dehydrogenase" /protein_id="GAK31308.1" /transl_table=11 /translation="MLTQEFTLADGNKLPAQGFGLYKVNEAAELELALKTAWESGYRL FDTAQMYGNEAAVGAAIKQTQLSRDELFLTTKIAEANQGYDQTLASFEQSLQDLQVDY VDLLLVHWPLHTHFFETWRAFERLKEQGLAKSIGVSNFTMAHLQLLATKANMMPVVDQ IELHPSLNQAAMLEFNQSQEIVTQAWAPLGRARNLDNPVLQAIATEVGRSAAQVILRW HLQHGVAIIPKSVRPERIRENAALYDFNLSSEQMQAIDALNTFTRISQEPELVYERGA QYPHN" CDS complement(7238..8317) /codon_start=1 /gene="araR" /locus_tag="WOSG25_090060" /note="gene_1396" /note="identified by MetaGeneAnnotator; putative" /product="GntR family transcriptional regulator" /protein_id="GAK31309.1" /transl_table=11 /translation="MDTKYEKIKNDLLSAIKAGQYAIGDKLPTESELMETYGVSRYTV RRAATELENAHYAYRIQGGGMYVDNWAKRQADHVTSKKIGVITTHLADYIFPSIISGI ERVVSAEGYSLMITDTHNDHEVERVSLINMLNAGIDGLIIEPTLSAITNPNLDIYQKI KEANIPVVVINAAIDDKNFPVVAIDDRRAEFQLIDYLLKLGHTRILGVFKVDDIQGVH RMRGFTEAYQAHPMFAIDSDIIMYQSGKDQVAKMLSKIESYLEEPDRPTAIAFYNDEL AIQVMDVIRSLGLRIPDDISLVGFDDFQLSEYVDPGLTTTIHPKNKMGFDAAKMLFKL IDGQTVNSIVYEPQMVIRDSIKKLN" regulatory complement(8329..8334) /gene="araR" /locus_tag="WOSG25_090060" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" regulatory 8681..8686 /locus_tag="WOSG25_090070" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 8694..10118 /codon_start=1 /locus_tag="WOSG25_090070" /note="KEGG: lsa:LSA1856 5.5e-199 araA; L-arabinose isomerase K01804; Psort location: Cytoplasmic, score: 8.96" /note="L-arabinose isomerase C-terminal domain; pfam11762" /note="L-arabinose isomerase [Lactobacillus parafarraginis F0439]" /note="L-arabinose isomerase; Provisional" /note="L-arabinose isomerase; pfam02610" /note="gene_1397" /note="identified by MetaGeneAnnotator; putative" /product="L-arabinose isomerase" /protein_id="GAK31310.1" /transl_table=11 /translation="MLAENNYKFWFVTGSQFLYGPEALAKVEEDAREIVAKMNAAGTL PYPIEFKLVATTADNITAFMQEANYDDSVAGVITWMHTFSPAKNWIRGTQLLNKPLLH LATQFLDNIPYATIDFDYMNVNQSAHGDREYAFINARLKKNNKIIFGHWNDLDVQKQV AKWMDVAVAYDESFKIKVVTFADKMRNVAVTDGDKVEAQIKFGWTVDYWGIGDMAAAI DAVEQSAVDQLYIDLQAKYDYIQGDNSAEKFEHNVKYQLREYLGIKQFMDEHGYTAFT TNFEDLVGIEQLPGLAAQLLMADGYGFAGEGDWKTAALLRLFKIMAHNEKTVFMEDYT LDMRKGHEAILGSHMLEVDPSIASDRPRVEVHPLDIGGKDDPARLVFTGMEAEGIDAT MADYGDEFKLMSYDIIGNKPEAETPFLPVAKQLWTPKMGLKAGAEAWMAIGGGHHTVL SFVIDAEQIADLSKLFALHFINIK" regulatory 10118..10123 /locus_tag="WOSG25_090080" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 10130..11539 /codon_start=1 /locus_tag="WOSG25_090080" /note="Sugar (and other) transporter; pfam00083" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; cd06174" /note="gene_1398" /note="identified by MetaGeneAnnotator; putative" /note="putative substrate translocation pore" /note="sugar transporter [Bacillus licheniformis DSM 13 = ATCC 14580]" /product="sugar transporter" /protein_id="GAK31311.1" /transl_table=11 /translation="MAKKKISSNFIYFFGAFGGILFGYDIGVMTGALPFLQTDWNLAG NASITGWITSSLMLGAIFGGALAGQLSDRLGRRRMILMSAVVFAVFALASAFAPTHGG AMFLIAMRVFLGLGVGAASALVPAFMSEMAPAKVRGRLSGINQVMIVSGMLISYIVDY LLQGLPTGISWRMMIGMAAVPAVILFLGVLRLPESPRFLVKQGKLDEARQVLSWIRPA DEVASELADIQATATIEKKATSSTNWGSLLSGRYRYLVIAGIGVAAFQQFQGANAIFY YIPLIVQSATGKAATSALMWPIIQGVILVAGSLFFLVIADRFNRRTLLTVGGTIMGLS FLLPAILNMISPSLMKSQPMLLVVFLSIYVTLYSCTWAPLTWVIVGEVFPLAIRGRAS GLASSFNWIGSFLVGLLFPIMTAAMSQAAVFGIFGLICLLGVVFIRTRVPETRGHSLE EIEEAGAQKAGIDTSAEIA" regulatory 11830..11835 /locus_tag="WOSG25_090090" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 11843..12337 /codon_start=1 /locus_tag="WOSG25_090090" /note="gene_1399" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31312.1" /transl_table=11 /translation="MMQIQKVNAFSRLIHGVLKRKQSQVRPQTVLYEDLSQELWLVIL AQQAKIPTLASENNLMLFILLSCRAADYLKKETRLLLRNEPSESSRLDQITETVEPEL ELSLAAFIEQLDDVTNQRLLRLLVADPTLTHGQRQKSLRLSRATYYRRLNQLRQELKQ FLEL" regulatory 12428..12433 /locus_tag="WOSG25_090100" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 12441..12650 /codon_start=1 /locus_tag="WOSG25_090100" /note="gene_1400" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31313.1" /transl_table=11 /translation="MKVIKKVRFNGVLKSAAGSLQTVVRTFQVRVNLTESELKRLISL VETIGAEEILEVRVITVEVPFSKAK" regulatory 12653..12658 /locus_tag="WOSG25_090110" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 12665..12949 /codon_start=1 /locus_tag="WOSG25_090110" /note="gene_1401" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31314.1" /transl_table=11 /translation="MLKSLALIFQANINVGNRTKKVITFDNARADLTKERTQAIMEEL KAMDFVLVNNGTAKFGNSLGEIKGAHYVASQKEVIFGETPNKSEDSIELI" regulatory 13370..13375 /locus_tag="WOSG25_090120" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 13382..14446 /codon_start=1 /locus_tag="WOSG25_090120" /note="gene_1402" /note="identified by MetaGeneAnnotator; putative" /product="LacI family transcriptional regulator" /protein_id="GAK31315.1" /transl_table=11 /translation="MKRYRCLYILNERDKFMIEKAKRPSIKDVAKLAGVSITTVSQIL NHKSERFPRDTIERVIAAKNQLGYIPNKSAQKLRGTAKPLIGVLVPSLRNPFFADLMQ SMEEHANNQVELIFQAAKDADFKANIENLVERGVNGLVIARTVERAEETFTFLKQHGV AVTVLDQANDTGMADVLTTDDYHGGQLVGEFLVNQGHQSVALIIPDIVTNNMQRRIDG FKNQWLAETRQLFEIKTVLSKHGGLAVSAKVAQLVSSGVTAAFTLNDELGIGLSRGLR NIGVKIPTDLSIIGYDNTDYSEFVNPALTTVTQPVWQLGQRALDMVTDRLKHPSMPYQ AEELAVIRLVERESTQALTN" regulatory 14528..14533 /gene="rbsK" /locus_tag="WOSG25_090130" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 14543..15463 /codon_start=1 /gene="rbsK" /locus_tag="WOSG25_090130" /note="gene_1403" /note="identified by MetaGeneAnnotator; putative" /product="ribokinase" /protein_id="GAK31316.1" /transl_table=11 /translation="MKNIVVVGSLNLDVVSEIEKLPHQGATISVKHQSQNLGGKGANQ AVAAARQGGQVSFVGAVGADEAGERFKKVLREEGIDVSGIVTKKVPTGSASILLEDDG HNTIMVYGGANAELTADDIVKSENIIANADVVIAQFEVPQEAVAKAFYFAKKYGALTI LNPAPIIEQEAILPEVLSSTDIIVPNETEAAALVGMEPSTDKAKLAAVREAMAQLTIQ KTVITLGEDGVFYHLADEDQVAPIFKVKPVDTTAAGDTFIGSLTVELNKDLTNAAEAI KYSSKASSIAIQHFGALQSIPTRREVLKDL" regulatory 16359..16364 /locus_tag="WOSG25_090140" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 16373..16645 /codon_start=1 /locus_tag="WOSG25_090140" /note="COG2211 Na+/melibiose symporter and related transporters" /note="Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]; COG2211" /note="gene_1404" /note="identified by MetaGeneAnnotator; putative" /note="melibiose:sodium symporter; Provisional; cl15392" /note="xyloside transporter [Leuconostoc gelidum JB7]" /product="xyloside transporter" /protein_id="GAK31317.1" /transl_table=11 /translation="MAKFAPADDQFAKLTVADRNGFAVGDFSQNLIFGTVGGFLLFYL TSVSGISAAVGATIFLFVRWVNVFWDPWVGSMVDKSPVTKDGNLLR" regulatory 16760..16765 /locus_tag="WOSG25_090150" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 16775..17023 /codon_start=1 /locus_tag="WOSG25_090150" /note="gene_1405" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31318.1" /transl_table=11 /translation="MTSKSLAVELKNWRTAERLTLLQAQERTNIHRNTLQRYEHREGG IPKAENIIRLAKVLKMDLETVLRLAMYDKELNTKKKDQ" regulatory 17367..17372 /locus_tag="WOSG25_090160" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 17380..18180 /codon_start=1 /locus_tag="WOSG25_090160" /note="gene_1406" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31319.1" /transl_table=11 /translation="MERISFKQVQTSERFFQMPWALYEVDYYKKMTTDAKVMYGMLKD RFNLSVMNNWVDENGDVYLIFTIEKLQEMMNISKPTVIKVKKELKKYGLLEEVRQGLN KPNRIYVGMIKDVIHRVEPSDTKEVKNFNLQKSNNLTSRSKESLPQEVKNFNSNHTEV SNTTFNHTEIISFDDDEQINQSAGEELQIEEQVIAQNLKSEMGISYKALNPAQRNKLL ELVKATDLEIVLAGIKRSGLAGGKSINYVVSTVETLENELQQKMAQTY" regulatory 18333..18338 /locus_tag="WOSG25_090170" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 18348..18629 /codon_start=1 /locus_tag="WOSG25_090170" /note="gene_1407" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31320.1" /transl_table=11 /translation="MKNNQVRTVTMTVENYNKILAVKEKADFEGIKKSKEELVRMFRA NEFDRLSLSAVFDVYRNFDTAKFMKRSNNKVICKISVNTGQDMVEVRQQ" regulatory 18609..18614 /locus_tag="WOSG25_090180" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 18626..19306 /codon_start=1 /locus_tag="WOSG25_090180" /note="gene_1408" /note="identified by MetaGeneAnnotator; putative" /product="probable kinesin-related protein KLPA" /protein_id="GAK31321.1" /transl_table=11 /translation="MKPTKKANSLRQKIYQDELEKQRQQRDIELRKQLQAENIESEAA VSELKRKLENEKSRVASVIFERLVDDKFALITSKDLDLKVTSNILLQSELYQVISDFY DKIAEELGLIRIKIDPDNREAKRYLTTKQLSDYDYKSEELNVVFGTNKDYQEVRKRRL KDITFLIFYPWLFAPILPLIFSLMALWFRHGDVVWNDPRFLLLNFVLLLVFPIATYIT AWWNDWEI" regulatory 19630..19635 /locus_tag="WOSG25_090190" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 19646..19924 /codon_start=1 /locus_tag="WOSG25_090190" /note="gene_1409" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31322.1" /transl_table=11 /translation="MYELKLNDLREIGREKNATAKLTTGQIGELRKDGLYITHSHAYI DGQFGEVKLRRNYKDAYPLIKTIKRGRALIAERRNGKLVTTYKYNQSR" regulatory 19936..19941 /locus_tag="WOSG25_090200" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 19951..20697 /codon_start=1 /locus_tag="WOSG25_090200" /note="gene_1410" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31323.1" /transl_table=11 /translation="MKIVTVNVNKGGAGKTTLSFNLTEYMRKESRVLLLDFDDSANLT NRYGYFEDKKNTVINLFDKKEIEPIHVAENLDLIAGHKEVELLKERLASRRRREYIFG TWLAENEEWLTKTYDYIIIDTENDEGLLTLNAIIVSDIVIGVAEASKDSFLSLISLRK FVTDLNVEFNGDTKLIFVANKISNDNPSKELIEDLSEYEEYAGYMPQRTVLKDDKSIF SSKNYRDKVVAKQMAELFAGLKVKFDEVTI" regulatory 20681..20686 /locus_tag="WOSG25_090210" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 20697..21032 /codon_start=1 /locus_tag="WOSG25_090210" /note="gene_1411" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31324.1" /transl_table=11 /translation="MGRFDKFKEAAGSNVEPISLDKKHVGRTNTKTKSAKVEAVPTKS IKIKARNYDQLGLLKVAGQGSYVELLDKAVTEFVDEFLTDNPEYQAMFSKIDNDLENP NQMSIEDFL" regulatory 21167..21172 /gene="srtA" /locus_tag="WOSG25_090220" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 21183..22028 /codon_start=1 /gene="srtA" /locus_tag="WOSG25_090220" /note="gene_1412" /note="identified by MetaGeneAnnotator; putative" /product="sortase" /protein_id="GAK31325.1" /transl_table=11 /translation="MVEQSKSEYSFYNPKKDRWWRSPKKILIGLGTIVTCLGICVGLY YGYAAFNNYQINQQVSANQKADAKMKFKAATAQEKEKNQDLSFTQNDDIPDAKTIQRY RALPEKLNHVGLVAVPIQKGVTTPIKTTWINEGSSNKVLASGAGTIKGNQVIGIGNFA IEAHTVKFGNNTVLFSPMQHAIDVNKTPKVYLTDGKKIFVYEFYKESDPIKGRQKLDY SHGEVASDSRVQNDPLVTMSTCDEEERWDTNTKSRIIMTGHLVSQVNKYDASDFEKSL FPQIF" regulatory 22032..22037 /locus_tag="WOSG25_090230" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 22047..23894 /codon_start=1 /locus_tag="WOSG25_090230" /note="gene_1413" /note="identified by MetaGeneAnnotator; putative" /product="putative cell surface protein" /protein_id="GAK31326.1" /transl_table=11 /translation="MNKDSKATQVINALQVGSQKTVVLFSTALILAGTGLNASRIFAE DTTNKDTDTTAKKGDNGISINVGNDDLKAAAKEAQDAGLKVTEKATKYQTVTEKDADE TEKKVAADNAAQAKSIREKVAKYKADKAQYDKDKAAYDKGNSAIPSQDNANDSGLNTE GGVSKNGDWRYMLTGSRDDVRNSKLTIVASKNLSAAVAEHQYLKKGTILRWNDNTQMT QEQGKTGSMFDGSVYDNGGSVVLTNVGTLQDGTNVNMKLSSDQSFLVAPHEPNQDNNG RSGKIIVDSLDDANITYQFIDDKGNPVKIWHGLFLSDIDEPVSGYIQNVDLSKAQQNG IAVVDNGLNVDKYDLVRKQSGDNTDSNKDSVMAVEYGSHNTIHVYNSGSTKSNGYGDK QRHMITPLFGQELDVTVLNPPAEITKPDIEYQTTELVEVPEVTKDVEAGEVNGDTDAS INGKQVKKGDELSYPLAVKTALPANREDIKSLSWKDKLPDGFEYKSAKAFDENGKDVS NYLKIEYKDGEFVATATDEYLKLINADKTKAFKLLTIDIYGNANKDGVTFNNTYELSV NDKTFDSNEVSNSTPAAPEAKQEPTPQLAHTGTTNGLKVLWNKFLQVFN" regulatory 23936..23941 /locus_tag="WOSG25_090240" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 23949..24404 /codon_start=1 /locus_tag="WOSG25_090240" /note="gene_1414" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31327.1" /transl_table=11 /translation="MRYSRPTERRTKAIDFPAGYHDVRIADVTATTAKNKETQMFVLK LIGSLSEVGYYNLTFGNSMTDENIGFILASIEDHGVEIPDIDFAYNRQTVDFLNGKQA YIKVTTERYRGTDKGRVDEFVTAAEFNKHRKNNDEAAESVEADEADLNF" regulatory 24473..24478 /locus_tag="WOSG25_090250" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 24487..24714 /codon_start=1 /locus_tag="WOSG25_090250" /note="gene_1415" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31328.1" /transl_table=11 /translation="MDIVIKLIGVIGGVVTVLGLIGLLTGYQDFSSGRKNDNPSKMEQ GINAMIFGGVQAAIAAGVVAAIVAALNNIKF" regulatory 24713..24718 /locus_tag="WOSG25_090260" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 24724..25503 /codon_start=1 /locus_tag="WOSG25_090260" /note="gene_1416" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31329.1" /transl_table=11 /translation="MNVNKDTINQLLSSMKDYNLTANAFSEDVAKALMAVGLAILGVV WYIEFADLNRRFSTGADDVKTTFWLRLAITYLVGMALIMLGPQIIDALVWLNSAIGHL INNVKLDGGHGSANIPNITKKAHGWEKFVIGWLQTCGNIFIWLDQIIINLLIFLRFLT LYIMKAAIPVMVALYASEEFKSISMGFFKQVAALVIQSFLLVLIVKLYPVLINNDIFS VVANGDVAQNIAAMFEVIVKGVVIMVTLIGSQVMARRWMGV" regulatory 25493..25498 /locus_tag="WOSG25_090270" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 25507..25869 /codon_start=1 /locus_tag="WOSG25_090270" /note="gene_1417" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31330.1" /transl_table=11 /translation="MALQSEFHTDMSKVEPIVWKSFTKPQLIMILMITPAFILIGVEV FLIKGWLFWPAALATAVIFITPAVLKTSGKIEQVRATWFFNMKIQKRYYSTGKIRKYT PDEFVQKKEVKETDSFTD" regulatory 25802..25807 /locus_tag="WOSG25_090280" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 25817..28189 /codon_start=1 /locus_tag="WOSG25_090280" /note="gene_1418" /note="identified by MetaGeneAnnotator; putative" /product="TraC-F-type conjugal transfer protein" /protein_id="GAK31331.1" /transl_table=11 /translation="MNLYRKRKSKKLTVSQIRKQERLRKLAPTTQNTIKYTSQFQDGL MHIVGPEFSRMWQLGKIDYEVASSDDQSNILVSYAHALNVLDKDSRYQLLTVNKRVSE SVLESILIEPQGDGYDVYRNEMNNIISERYSKDQKNFEATNYMILTTNARDGKQANRK LNNMYSKFYKEFNDTDVGLNFRALEGLDRLNIMNGILRPGYHFTADYSDIALSGLTTK SFIAPSHLEFKDTYFKINNAFGAVMYIRDYPKNLEDRLIQKLTDSGHELIISIHAKPY DMVEARKELRNKQTLNNAEKVRQQKDNYKNGISDDMIAGSVSEVGAATKALNEEFKDN GQKLFSGIFTVMLIEPTKEKLNEAITNIKDIGHEEYVEFEETYEFQEEALNTILPIGK PYLDVERNYMRDMITSNVAIQVPFTNVDLQSPTGQYYGQNQMSHNLITIDRKRDLITP SGIYLGSSGSGKSMTVKWGMITTLLNPGNADDKIIIVDPESEYLEIGRAFNAEILDIS SGTNNHLNLLELPDTALFDAEDQKIDVYKEKANLLASLFDSILKDFDDLESSMVDRVT RLTYKKFEGADRTPTLVDWYEVLHEQDGEVAQDLYQKVEPYTVGSQDIFAHETNIDMN GKFLLFNIKNLDERMKPFAMKVILDQIWRQVVANQNKITTHLYFDELQLNFDTPENSA WFSKLWSRVRKYGAVSNGITQNVSTLLEQPSGEKMISNSEFIVLLRQKAVDLEHLRRV IKLSPALLKYVGEKVQKGTGLIVAGGTAVPFENPIPHDTKLFELMNTDAN" regulatory 28188..28193 /locus_tag="WOSG25_090290" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 28199..30757 /codon_start=1 /locus_tag="WOSG25_090290" /note="CHAP domain protein, partial [Enterococcus faecalis TX2137]" /note="CHAP domain; pfam05257" /note="KEGG: lla:L159324 2.3e-19 acmB; N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.98" /note="gene_1419" /note="identified by MetaGeneAnnotator; putative" /product="CHAP domain protein" /protein_id="GAK31332.1" /transl_table=11 /translation="MSEEKESKLKKAFTEHKQFKSEEGDRIGENKFIKPRAATKLTKK SFVDAKAQYKKEKDAFKEAKQDAKKLGKDQEPIQKSKRLKEAEREKKLSKRVYKRTKK SDTSRLSYKTKRLSKAQLKNYGNRKVQEALEEDETLATALDTKRKVEKSKQIYNRSKP AAKLVKKAGKVSFNFVDRGQNLLRGNGFQKTPEQFKVTSRVRKAFQQRITGSKNLSTA SKGLSQIVSFFKKKTKVKVFGLGLLLIAFISFFAGGTIGGSMAIYQEDKDLTDSWTYL SYVDAQNSDSGNVFYSKLDDVMFYMNYKFEDYGLNDIMDPRIHIGTYKGYLNDVWKGL NGSKLKYELTTMDSLEKDKKSPFHLDTSDYEEMKDIDDDTGYTDLSNQLEFPIDTDSL VVNHRYGYERNGEDIKLHDSIDAVVKDQQDVKAPLDGKIELSGKKGQLIIVDKNEVKL TVTGLNNGRFVGGEKVKAGDVIGQAKGTDLNFKFEKYDDDDKKWFTVNPGFYFPKVTY TQFTTLASANFDPTGDVSKRAQQIYDYLSKLGYTKEGIAAMIGNFDTESHINAKRAEG DYLAPPVGASDSSWDDTNWLNMGGPDIYNGRLSNIVHRGLGLGQWTDTADGGNRHTLL INYAKSKGKPWYDLGLQIDFMLNGDTAGSQTALKNVLSRKAGATIPALTQYFLIFYEG NPGDKLQQRIQSAENWYNYFNNNGGHTNESGQKVLDQYKDKIQPEPTTKETKDGWPGN AYALGNCTWYVYNREAQLGHSINPYMGNGAEWARNYVKTPGASLTDNPQRGDIAVFSG GAASTSAQYGHVAVVEYANSDGSFVISEMNYGGIYQMNWRVLSKQAGISFIHLG" regulatory 30797..30802 /locus_tag="WOSG25_090300" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 30813..31523 /codon_start=1 /locus_tag="WOSG25_090300" /note="gene_1420" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31333.1" /transl_table=11 /translation="MYDEKKIKRFKTIVGIVVAVLIFIVAYSVGHYTANAGGQAKNVP QKVTASKNELSRSTVEKFDLAFFTKKDLGENRNRYKDLMTEAMYNQEVAEENKPVNQA YKGMVIDQALKSQNIYIDQKNNTALVDVEYTNTQLKEPGNLKTALKDQNNNATLKLSF VKQGKKYLVNEIKWVSLVEAGSSSTNSGSVSFSSSSSSSSAGTAASSSSTTSSSAASS SSDDNDTNNDLAASYQLW" regulatory 31521..31526 /locus_tag="WOSG25_090310" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 31534..31728 /codon_start=1 /locus_tag="WOSG25_090310" /note="gene_1421" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31334.1" /transl_table=11 /translation="MAKLAVLQAKQGKLAEQVEKKREELSKAESELEALNTEIVAQLL VENNMTMGDLVKKVTEKSFN" regulatory 31770..31775 /locus_tag="WOSG25_090320" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 31784..33040 /codon_start=1 /locus_tag="WOSG25_090320" /note="gene_1422" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31335.1" /transl_table=11 /translation="MRLFRKKYIYEFLNGVNFGDFDPKSPEEMIGIVESESYRLEDEH RHGSVIAAKSFSDKKIFVAIKVDLPLSENADIDELLQDLYSKKYVPFNEHIFDGGEVY IKDEEAAKGSISSSPETSEAEMPNEMKALLAKSKAAENLEPVAEPTDVTSNAVAKLEK QMAEQRAEVAELRKQLAQREAESAKKDSKGAVEPENPELPTNESIKPELENEPVPGTN RVQNGQQSTDDNLEQQPAEIVDVVHGVSNMLGTNLADFVASEKAKILADLRQYDKRYL IEPEVKSRIEEQKKTTIRSLTQQSDTEKSAAISSENERHANELKNIDVRFTESLNKDI SVATTQLDTQAKQEIAAEYKKQTSQLDNILKGKTDELQMRQREINDSMRAEFEAAMSE FNNGHEAVIKEVENQRVSDNIISMRA" regulatory 33068..33073 /locus_tag="WOSG25_090330" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 33081..33377 /codon_start=1 /locus_tag="WOSG25_090330" /note="gene_1423" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31336.1" /transl_table=11 /translation="MNIINKEKTGKPKNRKRNMFKLLAEAGTFLSSLIAILAAIFYLI ILGVLFKASNPTYANIVIGVLTGINLISIFALVYAAEKSAGQVKKAFVMLQADR" regulatory 33453..33458 /locus_tag="WOSG25_090340" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 33466..34173 /codon_start=1 /locus_tag="WOSG25_090340" /note="Fic family protein [Enterococcus faecium 514]" /note="Fic/DOC family; cl00960" /note="Protein involved in cell division [Cell division and chromosome partitioning]; COG2184" /note="Psort location: Cytoplasmic, score: 7.50" /note="gene_1424" /note="identified by MetaGeneAnnotator; putative" /product="Fic family protein" /protein_id="GAK31337.1" /transl_table=11 /translation="MVLENKLNITDQVELNRREELVSKTRAKQLFDSGDIDKIEVGTF KGLATIHKYLFQDIYNFAGEIRNVNIAKGNFQFAPRIYLEPALQNIDKLPQATFKDIV EKYVEMNIAHPFREGNGRSTRIWLDLILKKELGQVVDWQKVDKEDYLLAMERSPIKDT EIKVLLNEALTTQINNRQIYMKGIDASYFYEGYFEFPTESLKPIENKFEERLAKSEWH GDKYPADTDLSQKHPKL" regulatory 34234..34239 /locus_tag="WOSG25_090350" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 34244..34759 /codon_start=1 /locus_tag="WOSG25_090350" /note="gene_1425" /note="identified by MetaGeneAnnotator; putative" /product="minor structural protein 6" /protein_id="GAK31338.1" /transl_table=11 /translation="MEQKEVIHKITTSSDMTIRALYQLMEQFELWLHDSVKNHINTTM LGEQPLYKLLNNGSGPLTSQQVNQSVDLDKLKEYLNEQGLAFAFKANKDGSHNLFFKV QDKGLAFKALENVKNDMISNPTTFTQKIAKDPAKITFADKVENALKSQKEITNQLASK QFEVGQKGVAK" regulatory 34743..34748 /locus_tag="WOSG25_090360" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 34759..36558 /codon_start=1 /locus_tag="WOSG25_090360" /note="Pfam: PF02534; InterPro: IPR003688" /note="TraG family protein [Enterococcus faecalis HH22]" /note="TraM recognition site of TraD and TraG; pfam12696" /note="gene_1426" /note="identified by MetaGeneAnnotator; putative" /product="TraG family protein" /protein_id="GAK31339.1" /transl_table=11 /translation="MQTYKKNPRLYVVISAIFAILGFTVTNWVIVAPGLNILDKFSYV TSSLGLHELVDHVFTYLMMFHWWSIGVAVIGVILGWFMYLYGNDHGIYRVGEEHGSAR FAKVKEMKKYQDKEPDNNIIFTKNAQMGLYNRDLARDVQRNKNTVVIGGPGSGKTFTY VKPNLMQMNASYVVTDPKGLLVRETGKMLEDNGYKVKVFDLANLANSDTFNVFNYMND ELDIDRVLEAITEGTKKGDKGGEDFWVQAEGTLIRAFIGFLWFDGRLNDYTPHLGMVA DMLRFTERKDPKKPSPVEEWFEELNEKVPNNYAYKQWQSFNNNFRSETRTSVVAIATA RYSVFDHEAVVDMIKRDTMNIEAWNEEKTAVFIALPETSGSYNFLASIFLSTVMETLR YKADQTLAGLYKPKNGSLLHVRFILDEFANIGKIPNVDKALATFRSREMSLTIILQAL DQLKTMYSKGWASMINLADTLLFLGGDEKETVEYLSKRAGKQTIQLRNHTMQNSNRGG SENRQTQGRDLMTPDEIGRLQGDKALLFVSKEFVFEDSKYNVTDHKNAAQLADGPQDS NWYKYRRFKDETEELLYMVDPSNVIDHGQLETI" regulatory 36594..36599 /locus_tag="WOSG25_090370" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 36608..36910 /codon_start=1 /locus_tag="WOSG25_090370" /note="gene_1427" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31340.1" /transl_table=11 /translation="MNDFGVVKRQRQDIINKLHKDFVFLIRNEWFRSTGIFNSTIGPL SDMLHNLTQPSFEYFDSELAKYFAYLKDNRHILTANLVHIDEQIEMINKYFQRVEK" regulatory 36966..36971 /locus_tag="WOSG25_090380" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 36979..38127 /codon_start=1 /locus_tag="WOSG25_090380" /note="gene_1428" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31341.1" /transl_table=11 /translation="MRYESFRAKRAAYEKTRQMNILDVANSLGMDMKKMTSKEYEWTE HDALKINPAWNHFTYWSQTGTDGKPLHGGPIQLVQEIQHVSFSEAVAFLTGQDIKEFE YVPVERKDFEYKFKEHEYTDLTVEYLTKERGISEATVRELLERGIIAQTNYTTDYEKH KSEPVVVFKSIDAKGVIKGVSLQGIWANEEYGERKHLKRSLGDGNQGMILKVGNPNLT KATPEKPYTVIVFEAPIDMLSYYDLFKSKLHDVVMVAMNGKKPVVISNVLADAINPNA AQDLKERALEIVDKNMQPDIFKIVFAVDNDIHGIEFIEKINIKNIPVARHLPKMLPGQ EKTDWNDMLKHVRAKNKNKANSFETRLNEAKAAKTEAVQPDKVATKSM" regulatory 38174..38179 /locus_tag="WOSG25_090390" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 38187..39245 /codon_start=1 /locus_tag="WOSG25_090390" /note="gene_1429" /note="identified by MetaGeneAnnotator; putative" /product="LtrM-like protein" /protein_id="GAK31342.1" /transl_table=11 /translation="MNQKEIKNLKKQIVDESALNIGYFEGTREAIIQAAPDILEKIMA SGTGDYLTTLAKNDDIQFDNVFVSEAVRLMRYSEFKEVAHKFFGYEKGNEEVLAEPIT LTRDAFENLKERAKNNFMATPAAFLDEAPTVEVDRINEPIAYNPLTQEIAFLVEDLNV EPYRDENLISDYRSEKRDLILIIDKLEQKLDPLTFDSLVTNTDSGLGDTTSIINEWNK ALADKSQEIIKYTACDQVYGDTWDLYYFFDAKSMPGISRENILNYLEHEIGAYYRGDL VELRIFDRDNVETSTYKADRKMFNHNEVDQVKMITGSKDYVDLATGFKLQNLGVKITP EVLNEFLNAEPKDNSLKK" regulatory 39285..39290 /locus_tag="WOSG25_090400" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 39298..39813 /codon_start=1 /locus_tag="WOSG25_090400" /note="gene_1430" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31343.1" /transl_table=11 /translation="MIGEQDFMWTTIIGLLTGLGLLIGVFRDSKNIIGGIKDLKIGKK ELSADHQKILNKQGKLSSNMQLQTKAIDGLTAKINEDTQRVSMMNATEQNARSSIESL QNFINIAQNDRRHAEDKALEWRSKYAELYKQYELKQQELEQAQELNAELTREINNLRP HQGPTLGGRGR" regulatory 39861..39866 /locus_tag="WOSG25_090410" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 39873..41390 /codon_start=1 /locus_tag="WOSG25_090410" /note="gene_1431" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31344.1" /transl_table=11 /translation="MSKTDEFNEKFADLIEVFDYYKTLDSSTLVPNEYRPDLLDDLML LADNQADPLQNEAQNFIQDNLKPNNAHSEFTFIYQQGNLYTTVISDFISESQSNDFAL FAGAVLNATGELPYDEIYEQERNFIKISPKELPLDEMKNLLKQMAAMQQGNPLDNLKI TEFIQHKLKKAEKNNSKNELSNLIKAKDYKGVSATLKNGIHDYLQSDTFKKYLQFISK FHKYSSNNNRLILGQNPGATHVASFNKWKELDRKVVKGSKAIYVYAPMQVVKKDENNK PIVDKNGEIQKETFFKLVPVFDVSQTNGKELPKQVYELPGDINEPEKFKQYFDTLASQ TSAKVRIQTNEVLGTSEGFYKPSDNLIVIKKGMGQEQTIKTLIHEIVHAELHTNSQAV FGSREYSQHEFEAESVAFIVADHLGIDTSEYSFGYLSSWTSGGLEIDSFQSSLEAITN EAKTLITKIDATLEKTMTKDKTENLFEERVNKAQSEIKLAAVSDEKQQEKASPKV" regulatory 41459..41464 /locus_tag="WOSG25_090420" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 41472..41747 /codon_start=1 /locus_tag="WOSG25_090420" /note="gene_1432" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31345.1" /transl_table=11 /translation="MRISEQDMLAVISEVMLEDPASETPKVRQNRVNITRNQLSNLLI GLANDYHDSEVDVDLTLYKNTVLEIKAMKSDSDFDRLMDSFFEAYPQ" regulatory 42024..42029 /locus_tag="WOSG25_090430" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 42037..42507 /codon_start=1 /locus_tag="WOSG25_090430" /note="gene_1433" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31346.1" /transl_table=11 /translation="MTEKKKYKLQRPIQKIVRLSEQENELINKKVAASVQNNFQNFAR LMLINGEVKFVDYSELRTLNSQVNRIGNNVNQVAKLAHLFNEISPAEIEELKGMLQEM KQLITGTLNQEIRNEKSIDLNNEQPDVNKIVEGLNKINDIGEEQINGLHETQNN" regulatory 42464..42469 /locus_tag="WOSG25_090440" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 42479..44116 /codon_start=1 /locus_tag="WOSG25_090440" /note="gene_1434" /note="identified by MetaGeneAnnotator; putative" /product="relaxase" /protein_id="GAK31347.1" /transl_table=11 /translation="MVYTKHKTISKLKHLGSATSYVEDALKTVVEKSESSHLDNIFPY IMNDDKTLSKQLVSGYKIIDVYNAEEEFLTTKEIAARQKGTNFELDEETGELVFKRSS LEKNNAVLGHHLIQSFSPEDHLTPEEVHEIGRQTILELTGGEYEFVIATHVDKGHLHN HIIFNSTNLVTGNAFRWQKNTKRTFEKISDKIAEKAGAKIIEKSPRQTHQKYTLWQTE NIYKSKIKQRLDHLLQFSSNIEDFKQKAKALNLEVDFSGKWATYKLLDEPQIKNTRSR SLLKSDPEKYNLERIVEALGANVDQEISVDDVVESYQEKVEFAKNDFDYQLNLEPWQI DQVTNRGIYVRVDFGISQSGQIFVPGFKVDQLANGGASLFIKQKDYFYFMNEKQADKN RYLTGSSLVKQMSLYNGTIPIKKELVISTIDEMMKAINFLADHGVTSGAQVDNATQKL KVAVQEAQDKLNELDSKIIELNQTVKKIIAGDIVENIEQGITSDLLGAEIAANQTSRK LLDKKLNQTVNEFEYLNEVVMTKEGERSKNDYPKLNF" regulatory 44314..44319 /locus_tag="WOSG25_090450" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 44328..44486 /codon_start=1 /locus_tag="WOSG25_090450" /note="gene_1435" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31348.1" /transl_table=11 /translation="MASFERIVKNPVNEGILIKWYEDSGYKVTAKTRTVGAKNGQDVL EHYLNVVA" CDS complement(44465..44710) /codon_start=1 /locus_tag="WOSG25_090460" /note="gene_1436" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31349.1" /transl_table=11 /translation="MYSIFYAQALSLTYTNRSIIMWTNHFPNANSKFKVPYGLTPIIK YARMPLYLICAIKNKIKKGVESKLNTYLITYYATTFR" regulatory complement(44720..44725) /locus_tag="WOSG25_090460" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" regulatory 44734..44739 /locus_tag="WOSG25_090470" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 44752..45930 /codon_start=1 /locus_tag="WOSG25_090470" /note="gene_1437" /note="identified by MetaGeneAnnotator; putative" /product="transposase" /protein_id="GAK31350.1" /transl_table=11 /translation="MRTVLGIDVSKSKSNLCLVSDDGEIITEKKICNDLNGFEVIKSL FSEFTPEVIFEATGVYSRKLQYFLELNGIAYTCVNPLKAKKEMDTLRVTKNDRIDSKN LAILQLRRGYSETKLEKKIYLEIRRRHRFYQSITEDSVSAQNRLHKVLQETFSGVEDL FAGTELNFFRILTIFPHAQLVSKLEVSTIAIRISEVMNRRPESVLKRAEKLKKLAVKT AVSVETDSYAIDEVRYWAKRVLDLAQQKKDLLEEMYQVASELDELQIIESIPGIGNAG ALGIIAELGDIRRFSRPQKMSAFLGLDIRFSDSGKLTTRGFITKRGNSAGRKLLYRVT LSIIAASRWGNNTSVSDWYNRRAKDEHNGKKKIIVGAMDRTLRLIHHLVFEKEYYLVR " CDS 46078..47238 /codon_start=1 /locus_tag="WOSG25_090480" /note="COG2211 Na+/melibiose symporter and related transporters" /note="MFS/sugar transport protein; pfam13347" /note="Na+/xyloside symporter related transporter [Actinobacillus suis H91- 0380]" /note="gene_1438" /note="identified by MetaGeneAnnotator; putative" /note="melibiose:sodium symporter; Provisional; cl15392" /product="Na+/xyloside symporter related transporter" /protein_id="GAK31351.1" /transl_table=11 /translation="MVILAALLFLPVGTWLGTNMTLKITWAFVSYLATALVYSWVNIP YGSLMAGLTRDNDEIAKLTTTRMTWANTGNLLVYTLFPLFVQLATSYQNKPTTFGVGN LKLPLGNYASPHAAGAWFGVFAIYMVLGAIGLYITFKTSHERVLPEGDAPQVKFSDLL AEFTSSRPLQILGLFFLVGFTFMFFGNTVWPFFVQYNVGHPELMFMIGLIGSIPGIFL VFLWPIIRKWIGKKMFFELFLAIFILGSVMLFFWDKNPNNTFLGYAGRFLQQWGLTAA TGFMWALVPEVITYNEHKSGKRVAGIINALMGLFFKIGLALGGIIPGYMLAASGFDAT KMHQSAGALAGLVNAMIWVPVILAVVAGIIMWMYPLSDADVDRMNKEIAARG" regulatory 47340..47345 /gene="xynB" /locus_tag="WOSG25_090490" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 47353..49029 /codon_start=1 /gene="xynB" /locus_tag="WOSG25_090490" /note="Beta-xylosidase [Carbohydrate transport and metabolism]; COG3507" /note="Glycosyl hydrolase family 43, beta-D-xylosidase; cd09000" /note="K01198 xylan 1,4-beta-xylosidase" /note="beta-1,4-xylosidase [Lactococcus lactis subsp. lactis IO- 1]" /note="gene_1439" /note="identified by MetaGeneAnnotator; putative" /note="inhibitor binding site" /product="beta-xylosidase" /protein_id="GAK31352.1" /transl_table=11 /translation="MQIVNPVLPGFNADPSMIRVNDTYYIANSTFEWFPGVRLHESKD MVHWNLLPSPLSTTTLLDMKGNPASGGIWAPDLSYADGKFWLIYTDVKVTEGAFKDMT NYLTTAEDIRGPWTDPIKVNGVGFDASLFHDEDGRKYLVQQTWDHREYKHPFDGITLT EFDTATMKLMPETARTIYEGTDVKLVEGPHLYKINGDYFLFAAQGGTIYTHQEVVARS KSLDAKSFETEPGDPFITNFDTPYSYLQKQGHGALVNTPSGEWYYASLTGRPWNHENE SSTDPRGWSTLGRETAIQKVEWDEAGWPRVVGGHGGQTFVDAPKDAILTDAPADHSQH DDFTDNILDLNWNTLRVPFTDKMGTVGDGKLVLKGLGSLANNFELSMIARRWQAFYFD AETKVKFNPWSYQQMAGLTNFYNDRHWSFAFITWNEKNGHVIEVGENNRGNYTSYLKD DAIKIPEGTEYVWFRTKVRKESYTYEYSFDGTTYHEIPVTLDAAILSDDYVVQSYGGF FTGAFVGLAAVDYSGYELEAEFDYFDYKELGDKALENGTFSWERSEHRFG" regulatory 49082..49087 /gene="xylT" /locus_tag="WOSG25_090500" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 49099..50478 /codon_start=1 /gene="xylT" /locus_tag="WOSG25_090500" /note="D-xylose-proton symporter [Lactococcus lactis subsp. lactis KF147]" /note="Sugar (and other) transporter; pfam00083" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; cd06174" /note="gene_1440" /note="identified by MetaGeneAnnotator; putative" /note="putative substrate translocation pore" /product="D-xylose/proton symporter" /protein_id="GAK31353.1" /transl_table=11 /translation="MRKISPKTIYFFGALGGLLFGYDTGVISGAILFIQKQLQLNAWA QGWVVSAVLLGAVLGAAIIGPMSDRFGRKRLLLLAAGIFFFGALGSGLSQGFDLLIAS RILLGVAVGAASALIPTYLSELAPAKDRGGVGTMFQLMIMTGIFLAYVSNWLLASDTT NGWRWMLALAAVPAAVLFFGGMILPESPRFLVRKGRVEEAAHVLGMTNESEVKVEAEL ADIQLQASEEKKGGFQELFGEMSRPVLIMAIGLAIFQQIMGCNTVLYFAPTIFTDLGF GVSAALLAHIGIGIFNVIVTYIAMKIMDKVDRKKMLIWGAWAMGISLAVMSLGMHLKS IGTFGSYIAVIGLTVYIAFFSATWGPVMWVMIGESFPLNIRGLGNSFGAVVNWGANYF VSLTFLPLLSFFGTGNIFLLYAFCCFLSIWFIRTKAIETRGRSLESIEAELRHRAHHL HDTNTEIAK" regulatory 50762..50767 /gene="xylR" /locus_tag="WOSG25_090510" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 50776..51993 /codon_start=1 /gene="xylR" /locus_tag="WOSG25_090510" /note="gene_1441" /note="identified by MetaGeneAnnotator; putative" /product="xylose repressor" /protein_id="GAK31354.1" /transl_table=11 /translation="MENKLDQEAMRELNRKLVLQELFNEEQTSRSEIADKISLHKSTI STIYKELDSEHFIEELGEGTVSKSGGRKAQLVRFNRQYGFLMTFDIGRNHLRYLAARL TGEILSHDQIDVDAEMSYEDLKRTMLERVLRLGDLGTINGLVGISIGIHGVVNDNRVA YTPFNRFLLEHDLAHELEVALDVPVFLENEANLAAYYLRDFHENNFEPMREDFAVVNV HNGVGAGIIQNGQLVRGIKGAAGEIGRMIVFDDHGWQEAGYALPVHFEDLYSEDAILR RVSQSKGRAILRHDLFALYHAADPVVVDILQDWVKATTTMLFNIAQYSALSAFYVHAR LIAGIPELFADMQERYQKMQPQPVTELRYAGNSVYSSTLIGGIALTTRKILGLEDYNL YFLVPKVSDEFWD" regulatory 52272..52277 /gene="xylA" /locus_tag="WOSG25_090520" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 52286..53686 /codon_start=1 /gene="xylA" /locus_tag="WOSG25_090520" /note="COG2115 Xylose isomerase" /note="gene_1442" /note="identified by MetaGeneAnnotator; putative" /note="xylose isomerase [Weissella koreensis KACC 15510]" /note="xylose isomerase; Provisional" /note="xylose isomerase; TIGR02630" /product="xylose isomerase" /protein_id="GAK31355.1" /transl_table=11 /translation="MSDLFDFPKVEFLGGQKGVDYQAAKGFNFYNPTEEITIDGETKS MKDWMKFSVAYWHTMDQRMVDPFGEGTAERPWDVNGVDDMSDLDHAIAKVDYLFDFMD KLGVEYFAFHDRDLAPQGNTLAETNANLDKVVDRIAEKMEETGKKLLWNTSSLFTDKR FLAGGATTPFAEVFAYSAAQIKHSLEIAKRLNSESYVFWGGREGYESLLNTDTKRELD HIAAFFRMAKDYANEIGYTGQFLLEPKPKEPTDHQYDTDVESTLNFLRTYGLENDFKL NLEGNHAYLAGKKYEHEARFAREAGMLGSLDANMGDKQTGWDIDEFPNDIYEATMVMY EFILNGGLPTGGLNFDSKVRRGSFKPEDLFYAHMAGMDTYAAGFKVALKMYNDGWLEQ VKADRYSSFDDGIFADFDKGAKARDNKLTLADFENYILNKTSDEIYATVESQHLEAVK QTLNNYIYSVLGSRFN" regulatory 53771..53776 /gene="xylB" /locus_tag="WOSG25_090530" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 53785..55290 /codon_start=1 /gene="xylB" /locus_tag="WOSG25_090530" /note="COG1070 Sugar (pentulose and hexulose) kinases" /note="D-xylulose kinase; TIGR01312" /note="Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases; cd07808" /note="MgATP binding site [chemical binding]" /note="N- and C-terminal domain interface [polypeptide binding]" /note="catalytic site [active]" /note="gene_1443" /note="homodimer interface [polypeptide binding]" /note="identified by MetaGeneAnnotator; putative" /note="metal binding site [ion binding]" /note="xylulokinase [Weissella koreensis KACC 15510]" /note="xylulose binding site [chemical binding]" /product="xylulokinase" /protein_id="GAK31356.1" /transl_table=11 /translation="MSDVVLGVDLGTSAVKVSAVDRQGKIIAQEAYDYPLSQPKPGYS EQNPEEWVNGTTVAIVRLILNDGLSADQIKGISFSGQMHGLVLLNAENKVVRPAILWN DTRTTAQTKEIAEVMGQEFIDITRNKALEGFTLPKILWVKENEPELFAQATTFVTPKD YVRYRMTGNLQMEISDAAGTVAMDVAKRTWSKEIQEKFGLAADFFPEIIEATDFAGNV SSAYAEFSGLQADTQVFGGAADNAAGAVGSAILKPNMVMSSIGTSGVVLKYEDNADVD YAGKIHFFNHAIPGKFYSMGVTLAAGYALSWFKKTFASDMDFTDMVESAAKSTVGANG LIFTPYLVGERTPYADGDIRASFIGIDGTHQRYDFVRAVLEGIIYSFKDIFDIYDAAG ADFDTVVAIGGGAKSPLWLQIQADIFNKKVVSLKNEQGPGMGAAILAAVGLGWFDSVQ EAANTFTEFGKAYLPDPERAAKYAQMHEIYKQVYGQTAELSHQLLDYRREF" regulatory 55516..55521 /locus_tag="WOSG25_090540" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 55527..55670 /codon_start=1 /locus_tag="WOSG25_090540" /note="PFAM: Protein of unknown function (DUF421); COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: str:Sterm_4082 protein of unknown function DUF421; PFAM: Protein of unknown function DUF421; SPTR: Putative uncharacterized protein" /note="Predicted membrane protein [Function unknown]" /note="gene_1444" /note="identified by MetaGeneAnnotator; putative" /note="protein of unknown function DUF421 [Emticicia oligotrophica DSM 17448]" /product="hypothetical protein" /protein_id="GAK31357.1" /transl_table=11 /translation="MAYLLIAGSSATVYVFIILAIRLFGKEEIAQLSVIDLVFVLLIS NAV" regulatory 55662..55667 /locus_tag="WOSG25_090550" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 55677..56036 /codon_start=1 /locus_tag="WOSG25_090550" /note="gene_1445" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31358.1" /transl_table=11 /translation="MVGSNTSLSGGLVAATTLFFMNFIFKFLNYKFPKLSEYVQGHAI MLIYKGHVIEANLEHAKVGMNELLEAVREHGVKSIDDVDLAILEVDGNISVLSNDFQN KSQTKRHRNRKRTKDVS" CDS complement(56119..56514) /codon_start=1 /locus_tag="WOSG25_090560" /note="Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; pfam00903" /note="Glyoxalase/extradiol ring-cleavage dioxygenase; Family membership" /note="This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases; cd08352" /note="gene_1446" /note="glyoxylase [Lactococcus lactis subsp. cremoris MG1363]" /note="identified by MetaGeneAnnotator; putative" /note="putative metal binding site [ion binding]" /product="glyoxalase" /protein_id="GAK31359.1" /transl_table=11 /translation="MQKLIDFSNLHHIAIIASDYQKAKHFYGNILGLAVIRENHRPDK ADIKLDFALNSTTELEIFVKPTAPVRPNYPEAQGLRHLAFNTEDIVASVNYLKSQAVE VEPIRLDDITQKKMTFFFDPDGLPLELHE" regulatory complement(56525..56530) /locus_tag="WOSG25_090560" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS complement(56721..57020) /codon_start=1 /locus_tag="WOSG25_090570" /note="gene_1447" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31360.1" /transl_table=11 /translation="MHHRRARPWSFRWFLEHIASGILLLAVVLAATVALTALIITIEE LVVLVIRRRLINTYTNVYGNAWTTVIWHFLIIFIAVGFWSAIDTFIPAPTKDNQQ" regulatory complement(57029..57034) /locus_tag="WOSG25_090570" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" regulatory 57145..57150 /locus_tag="WOSG25_090580" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 57157..58026 /codon_start=1 /locus_tag="WOSG25_090580" /note="gene_1448" /note="identified by MetaGeneAnnotator; putative" /product="putative membrane protein" /protein_id="GAK31361.1" /transl_table=11 /translation="MQKVKAIYTKYAERWQLAAFITYLQRANLTNAGATIAYYTILSL VPVLMSVGSVASMIGFNHKQIYELMENSLPQNIASALNPILGSVLGGNAGTLSLALLV ALWGASRVLGVIRTSFNTVHDVSEKINSLFARIFGFLWLFVLLAGAGIVLLGTSIARI VVNSVPINVPVLTSLLNQSQIYGAVGLWIILVLFNFALPALRLKRKAVLIGSAIETIM MVVLNHGFSWYASLAIRNANFYQAMGTLIILMVYVNLIGVILVLTHVIIAWLSDLMEP TERLEKQSERTSH" regulatory 58138..58143 /gene="uvrA" /locus_tag="WOSG25_090590" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 58151..61000 /codon_start=1 /gene="uvrA" /locus_tag="WOSG25_090590" /note="The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep...; cd03270" /note="The excision repair protein UvrA domain II; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep...; cd03271" /note="excinuclease ABC subunit A [Lactobacillus rhamnosus GG]" /note="excinuclease ABC subunit A; Reviewed; PRK00349" /note="gene_1449" /note="identified by MetaGeneAnnotator; putative" /note="strain coidentity: ATCC 53103 = GG; synonym: Lactobacillus rhamnosus ATCC 53103" /product="excinuclease ABC subunit A" /protein_id="GAK31362.1" /transl_table=11 /translation="MTNDWISIHGARAHNLKNVDVKIPREKFVVLTGLSGSGKSSLAF DTLYAEGQRRYVESLSAYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGT VTEINDYYRLLYARVGKPDPAADGTIVKQSIDQMLNYLFTERAEGARLQILAPIVRHR RGSHATALAKVQKEGFVRLVVDGELHEVTDELDLDKNKYHDIAIVVDRIILRDSSRAR LFESFESALRMAEGLVSVEEIGGTTLTFSDHYTGALKDFAVGKLEPQLFSFNAPLGAC PVCGGLGVMQEVDVDLVVPDTSKTLSEGAIVAWNPISSSYYPEMLQQFATQNNIPMDV PFEQLTPAEQKLVLYGAGEDTFHFHYENDFGGVRDVDVKFEGVINNIQRRYHESNSDF TREQMASYMNELPCSACHGYRLNPGALSVKVGGKHIGQISELPVDQELDFFGQVSFGE QDEQIAAPIVKEIKDRLSFLKNVGLDYLTLSRSARTLSGGEAQRIRLATQIGSNLSGV MYVLDEPSIGLHQRDNDRLIKSLKQMRDLGNTLIVVEHDEDTMLAADYLIDVGPGAGE QGGEIIAAGTPAEVKSNPASLTGQYLSGKRFVSVPDQRRAGNGEQITLSGVSENNLKN VTVNFPLGKFIAVTGVSGSGKSTLVNTVLKRAMKQILNKNSEKPGRYKKITGLENIDK IVDIDQSPIGRTPRSNPATYTGVFDDIRALFAQTNEAKLRGYAKGRFSFNTKGGRCEA CKGDGVIKIEMNFLPDVYVTCEVCGGTRYNSETLEVTYRGLSIAQVLDLTVDEALDFF APIPKIHRKLQTIVDVGLGYVTLGQSATTLSGGEAQRMKLAAELQRKSTGKTFYILDE PTTGLHVDDIARLLEVLQRLVDGGNTVLVIEHNLDVIKTADWLIDMGPEGGEGGGQVL ATGTPEEIAEVRASYTGQYLGPIMIRDRARARKQA" regulatory 61452..61457 /locus_tag="WOSG25_090600" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 61466..61594 /codon_start=1 /locus_tag="WOSG25_090600" /note="gene_1450" /note="identified by MetaGeneAnnotator; putative" /note="predicted protein [Enterococcus faecium C68]" /product="hypothetical protein" /protein_id="GAK31363.1" /transl_table=11 /translation="MAGEKLDIASARRKLHSPNIKTRKRALRAIHDAKRQKQVKNK" regulatory 61726..61731 /locus_tag="WOSG25_090610" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 61737..62630 /codon_start=1 /locus_tag="WOSG25_090610" /note="ATP-binding protein [Weissella paramesenteroides ATCC 33313]" /note="COG: COG1660; Pfam: PF03668; InterPro: IPR005337" /note="Predicted P-loop-containing kinase [General function prediction only]" /note="gene_1451" /note="glmZ(sRNA)-inactivating NTPase; Provisional" /note="identified by MetaGeneAnnotator; putative" /product="ATP-binding protein" /protein_id="GAK31364.1" /transl_table=11 /translation="MAKRELVIVTGMSGAGKRVAMDALEDIGFYSVDNLPPQMLASFW EMVAEDPAFQHAAVMIDLRSQKFFKDLSGIMQNLLKKADRNYDLKLIYIDASDETLVA RYKETRRQHPLSGDKGTLWGIQQEREQLASIREMATEIIHTDELAARKLKQLIVSKYG DQEAQHNLFNVQVMSFGFKYGMPVDADLVVDVRFLPNPYYLKALRDLTGIDQAVSDYI WDNQDAKEFYQLELEQVKWLLPRYKAEGKTTLTIAFGCTGGQHRSVAFAHQLANDLKA NWKVNEYHRDIERRREGSTRA" regulatory 62613..62618 /locus_tag="WOSG25_090620" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 62627..63655 /codon_start=1 /locus_tag="WOSG25_090620" /note="gene_1452" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31365.1" /transl_table=11 /translation="MTKGQEQLEKFALKPVPKIVVIGGGSGQPVILGGLKKCDTNLTA IVTVADDGGSSGVLRNYLNMVPPGDIRNVLSTLANIDQEVIDIFQYRFNSDDEMLAGH ALGNLILASIAEQDNSIFSAVQRMSKLFQIDGNVFPVVDEPLVLHAEFADGTILEGEG AITAAGKKIKHVWVTPQFTLDKHRLPEAPSEVVNSILNADVVVLGPGSLFTSIMPNLM VPNVAEALLATRAKVVYVANIMTQKGETDGFSDADHVRAINEHIGERVVDAVIMNTAQ VPEDYIDWKKWNEVSRQVISDPEHVRAEGAIPVMGDLLELRDAGAFHDGYKVAQLIMQ IAAADKLN" regulatory 63662..63667 /gene="whiA" /locus_tag="WOSG25_090630" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 63673..64629 /codon_start=1 /gene="whiA" /locus_tag="WOSG25_090630" /note="Putative sporulation transcription regulator whiA [Pediococcus claussenii ATCC BAA- 344]" /note="Sporulation Regulator WhiA N terminal; pfam10298" /note="Uncharacterized protein conserved in bacteria [Function unknown]" /note="gene_1453" /note="identified by MetaGeneAnnotator; putative" /product="putative sporulation transcription factor" /protein_id="GAK31366.1" /transl_table=11 /translation="MSFASDVKKELTMLDISKADNARAELSALMRMNGSLGLANMHFT LNVQTENAATARRILSLLQKFYDVNSEISVRRQMKLKKNNLYVVRITQDVDKLLDDLR IFENFELLPTIPDSWLADEGMARSYLRGAFLAAGSVNNPETSRYHFEIYSLYEEQANQ LEQLINQFDLNAKTVERRSGYIVYLKEAEKIADMLNVIGATEAMLKFEDVRIVRDMRN SVNRLVNAEQANIEKTVTASQKQVDDIEFLDDELGLHKLPENLREMAQIRLSHREEPL SELGKYVTGGSISKSGVNHRLRKISQLADELRTGGSVPKILR" regulatory 64685..64690 /gene="clpP" /locus_tag="WOSG25_090640" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 64699..65292 /codon_start=1 /gene="clpP" /locus_tag="WOSG25_090640" /note="ATP-dependent Clp protease proteolytic subunit [Weissella paramesenteroides ATCC 33313]" /note="COG: COG0740; Pfam: PF00574; InterPro: IPR001907" /note="Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease; cd07017" /note="Clp protease; pfam00574" /note="active site residues [active]" /note="gene_1454" /note="identified by MetaGeneAnnotator; putative" /note="oligomer interface [polypeptide binding]" /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="GAK31367.1" /transl_table=11 /translation="MNPIPYVIEQSARGERSYDIFSRLLIDRIIMVNGPIESQMATAI IAQLLFLDAQDPDKDIYMYINSPGGEVNAGMAIYDTMNFIRADVQTIVIGLAASMASV LASSGAKGKRFILPNSQFMIHQPSGGAQGQQTEIAIAAEEILKTRKKLNEILAANTGR PYEEVERDTERDHWLDAEESLTYGLVDKIMVSANEQK" regulatory 65518..65523 /locus_tag="WOSG25_090650" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 65530..66525 /codon_start=1 /locus_tag="WOSG25_090650" /note="COG1052 Lactate dehydrogenase and related dehydrogenases" /note="D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; pfam02826" /note="D-lactate dehydrogenase [Weissella koreensis KACC 15510]" /note="D-lactate dehydrogenase; Validated" /note="gene_1455" /note="identified by MetaGeneAnnotator; putative" /product="D-lactate dehydrogenase" /protein_id="GAK31368.1" /transl_table=11 /translation="MKIFAYGIREDEQPALKAWIAAHPEVTVEFTDQLLDPETAKLAE GFDAVNVYQQLDYTRETLTALHELGINKMSLRNVGTDNIDFDAAREFDFSISNVPVYS PNAIAEHSIIQMSRLLRRTKAMDAKVAKHDLRWAPTIGREMRMQTVGVIGTGNIGRVA MKILKGFGAKVIAYDLYHNAEVEAEGLYVDTLEELYAQADVITLYVPGVPANHHMINA DSIAKMKDGVVIVNCSRGNLMDIDDVIAGLDSGKISDFAMDVYEEEVGLFNVDWSNKE FPDAKIADLIARENVLVTPHTAFYTTKAVLEMVTQSMNASLAFINGEKPSIAVEY" regulatory 66567..66572 /locus_tag="WOSG25_090660" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 66585..67733 /codon_start=1 /locus_tag="WOSG25_090660" /note="COG: COG3641" /note="Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism]; cl00557" /note="Phosphotransferase system, EIIC; pfam13303" /note="gene_1456" /note="identified by MetaGeneAnnotator; putative" /note="membrane protein, toxin regulator [Weissella paramesenteroides ATCC 33313]" /product="putative membrane protein" /protein_id="GAK31369.1" /transl_table=11 /translation="MNNEVFDGNYRFNLKDFLFKILAGSAQGILIGVLPSAILKYVLR PFIQSGMHWAISLNAILVLFSSFIPLLIGLAIAMQFKMKALDVGVLTIAVGAASGSIK WAVAPAGFVNPVSGLALKAPASVYIAAGAGDVINAMIVSAIGVLVIWLVYKYLWGFGA LAIILSPLVIGGGVGLLGLTIAPVVGNVTTWLGNLVEYFTTLLPIPMSILIAMAFSFI IITPVSTVGIALAISLAGLGSGAAGVGVIATTVILLINSVKVNKKGTSIAIFLGAMKG MMPSVFKRPQMILSFLLTAAISAIPVALFNVQGTPTTAGFGWIGMVSPIQSSVMDTAD KAFQTHTVSPMIAILVFFVVPIIAGLLSDFLFTKVIKLYKPTDLQQEL" regulatory 68103..68108 /locus_tag="WOSG25_090670" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 68117..68239 /codon_start=1 /locus_tag="WOSG25_090670" /note="gene_1457" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31370.1" /transl_table=11 /translation="MSLLDLQAKELGFKNWQELRKKLPNTTAQRLINDLILKEL" CDS complement(68303..68476) /codon_start=1 /gene="rpmF" /locus_tag="WOSG25_090680" /note="gene_1458" /note="identified by MetaGeneAnnotator; putative" /product="50S ribosomal protein L32" /protein_id="GAK31371.1" /transl_table=11 /translation="MAVPARKVSKNAKRSRRGGQGGLKTPAIHQNENGIYVRNHHVAS DGTYKGKQVVAPK" regulatory complement(68485..68490) /gene="rpmF" /locus_tag="WOSG25_090680" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" regulatory 68756..68761 /locus_tag="WOSG25_090690" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 68772..70130 /codon_start=1 /locus_tag="WOSG25_090690" /note="COG: COG1914; Pfam: PF01566; InterPro: IPR001046" /note="NRAMP family manganese (Mn2+) transporter [Weissella paramesenteroides ATCC 33313]" /note="Natural resistance-associated macrophage protein; pfam01566" /note="gene_1459" /note="identified by MetaGeneAnnotator; putative" /note="manganese transport protein MntH; Reviewed" /product="NRAMP family manganese (Mn2+) transporter" /protein_id="GAK31372.1" /transl_table=11 /translation="MLTNSVKDSVKDENGGSSLAEINGTVEVPQSGGFLRKLMAWSGP GALVAVGYMDPGNWITSIVGGAEYHYLLMSVVLISSLIAMMLQFMAAKLGIVAQKDLA QMIRDSTNKTTGWILWFVTELAIMATDMAEVIGAAIAINLLFGFPLLWGVLITAADVL LLLLLMKLGFRKIEAIVATLILVILAIFLYMAILAKPDMGAAVVNLVPHRDILKSGQL TLALGIVGATVMPHNLYLHSSISQTRKIDRNVPGRVREALKFTAWDSNIQLTGAFVVN SLLLIVGAALFFGHGSDMQAFGDLYRALNNSHIVGAIASPLLSMLFALALLASGQNST ITGTLTGQIIMEGFAHLQLPMWVQRLVTRGLALVPIIIFTIIFGATEGALDKLLVYSQ VFLSVALPFSMFPLIYFTSRTKYMGEFKNARWMTIVAYLVALALTLLNVQLIIQTISS LF" regulatory 70138..70143 /locus_tag="WOSG25_090700" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 70153..70590 /codon_start=1 /locus_tag="WOSG25_090700" /note="COG: COG0589; Pfam: PF00582; InterPro: IPR006016" /note="Ligand Binding Site [chemical binding]" /note="Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to...; cd00293" /note="gene_1460" /note="identified by MetaGeneAnnotator; putative" /note="possible universal stress protein [Weissella paramesenteroides ATCC 33313]" /product="possible universal stress protein" /protein_id="GAK31373.1" /transl_table=11 /translation="MEPKTFKHVLAAVDDSELGQMTLINAIHQAREDDARLTILSVFE SDDLSVFDYFSKNRNQAARDDVERALGRYRKLAEDAGVANVATMLAEGEPGEVIVKDV IPDIHPDLVVIGAHSKDDEDHHYFGSQSKYVANNAPVTVMVVR" regulatory 70695..70700 /locus_tag="WOSG25_090710" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 70706..71170 /codon_start=1 /locus_tag="WOSG25_090710" /note="gene_1461" /note="identified by MetaGeneAnnotator; putative" /product="transcriptional regulator" /protein_id="GAK31374.1" /transl_table=11 /translation="MMKLLNGYIDAYLTTVKYLDDVVSEPAMEFGLSFEQYLIMHSIA NHQSGLTLTEVVESRNVTRAAISRQIKMLLKKQYIYQVHDRADRRRMLLYLTSEGTVV EKVVTMRVQHRFEGWVETFGEASAERGLRILKLIERKIVSKARARIKARQLM" tRNA 71276..71346 /anticodon=(pos:71308..71310,aa:Gln,seq:ctg) /locus_tag="WOSG25_090720" /note="identified by tRNAscan-SE; putative" /product="tRNA-Gln" CDS complement(71511..71642) /codon_start=1 /locus_tag="WOSG25_090730" /note="COG0582 Integrase" /note="gene_1462" /note="identified by MetaGeneAnnotator; putative" /note="phage integrase [Weissella koreensis KACC 15510]" /product="phage integrase" /protein_id="GAK31375.1" /transl_table=11 /translation="MDIKTLQAQVGHDDINTTHNIYAAVTKDMRVKMADVFTSLVNF" regulatory complement(71654..71659) /locus_tag="WOSG25_090730" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" regulatory 72887..72892 /locus_tag="WOSG25_090740" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 72900..73640 /codon_start=1 /locus_tag="WOSG25_090740" /note="gene_1463" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31376.1" /transl_table=11 /translation="MAKKYLSTKTRTSHTFEFYEIRQDDPNWREDYLRIKAIRQREFI RSMMIGLVVLIVVCGGLFVIYGNKKQTAAKDNESSLVDHEKASVSSSSTSDKVSSSMS VETSNSMSDKVSSSETAEEASEFPHAVVYTGTWTDKFHYGDRMITVNKGSDDDSLTLE DSLTLPNSPVKYTDLQIENTDTKTLTVRTKRTGQTKRIKVNTEIYNPANQDTYYLGYN ADNVVTLIYPMSDAYGTPHYYEFDYINN" CDS complement(73837..74355) /codon_start=1 /locus_tag="WOSG25_090750" /note="gene_1464" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31377.1" /transl_table=11 /translation="MKYKPITILRTLVFILVTCFISLSIQTYRTHELDAPIHNSKLAL TSITASDLNHDQKLLMSTLVYYAISNISDGRWLEVSDFNRGWQIQKINVDGNIRYLVW PDKNIQAESKHIEPNWFEINGDTVSYHSFIIHSQGFDLTHTVAMSAIINAVNQPKSIH RINSMLPNLVIV" regulatory 74651..74656 /locus_tag="WOSG25_090760" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 74669..74827 /codon_start=1 /locus_tag="WOSG25_090760" /note="gene_1465" /note="identified by MetaGeneAnnotator; putative" /product="lysyl-tRNA synthetase" /protein_id="GAK31378.1" /transl_table=11 /translation="MCSKASKHKKIKSTKLDKIKRDALIMTEHRAQSTEHRAQSTEHR AQSTFKLD" regulatory 74839..74844 /locus_tag="WOSG25_090770" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 74854..76896 /codon_start=1 /locus_tag="WOSG25_090770" /note="gene_1466" /note="identified by MetaGeneAnnotator; putative" /product="N-6 DNA methylase" /protein_id="GAK31379.1" /transl_table=11 /translation="MVKSFETSVKQWADEQIRHLGWPIIGSEEQVIDADIERALKTNP SKSGGNGGGRPDYSLIIEDGEKRIPVFVEYKGAKNKLIKLDKQNLVILRDKDENFDYK QAIPHYAVNGAVYYAMNVVNDTEYREVLAVGVNGFESAGKMQYEISVYVLNKIHAELP IHLGDFKDFDFLKNKAIQREALFKKIEAVQLDPKEIEQRAIRDDAKIEAALQELNQKI HDEQQIIPSQRINVVAGALMAAIGVKNEDGGYKVARLKPSELMGSTEEGNTDGEKILR KITNSLKSRKLPEKKQKQIINVLRSNFVDNNLNQKSELETQTPIRAIYKEVYDKLIPI YDVTGINDFTGKLFNVMNAWVDVPDGGANDVVLTPRYVTNFMARLTRVNMGSYVWDWA LGSGGFLISAMNLMIKDAYEHYPNDKGKLFDTIEGIKTKQLLGVELLPNVYMLAVLNM ILMGDGSSNIVNDNSLTQYEGKYAYNEDPFPADVFLLNPPYSAEGNGMIFVEKAFKKQ KKGYGAVIIQDSAGTGKAVEINQRILKENTLKASIKMPADLFKASVQTSIYLFEVGTG GHKKDDNVYFVDLREDGYTRTNRKKAKINLINSNDAKGHYQEVVDLILNKAKKTNYFN ENDNYYLGTIDPESGKDWNYNKKIDTTPTEADFKKTVSDYLSWEVSQILKGTNQDF" CDS 76977..77525 /codon_start=1 /locus_tag="WOSG25_090780" /note="gene_1467" /note="identified by MetaGeneAnnotator; putative" /product="putative restriction and modification system specificity protein" /protein_id="GAK31380.1" /transl_table=11 /translation="MFQISNTKSFNKDRLTRVNEEKYPYVTRTSINNGVWGYTGFVNS ENINSAKTFSLGLLQMDFFYQKEAWYAGQFVRKIIPKFEINDILALYFSGILNKQKSL LLSVLVREVDDTFNNIEINLPVYNTGNIAFDYMEAYIKELEAERIKALETYLQATGLN SYVLSDEERQLVESFRKNGGGD" regulatory 77475..77480 /locus_tag="WOSG25_090790" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 77491..78042 /codon_start=1 /locus_tag="WOSG25_090790" /note="gene_1468" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31381.1" /transl_table=11 /translation="MKALEKMGGAISWREFEIGYLFDHVVQGRRLKKDDQIEGELPFV MSGTTENGIANYISNNVRIFPGNSLTVDIFGNVFYRSYEYGMGDDTGAYWSNDNKMAK YTMLFIGASMRISLFGQYDYGHKLRSSKSLGKKILLPIDENNQPDYEKMDKYIHAIEK LVIKSVVEWKDKQIEATRSVVSK" regulatory 78320..78325 /locus_tag="WOSG25_090800" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 78335..78946 /codon_start=1 /locus_tag="WOSG25_090800" /note="gene_1469" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31382.1" /transl_table=11 /translation="MYVKRFLQLFVVFFIAILLSELVVFGLGIKTLFWTIIVVSVLGY ILLVIPLVVMTIRKAKEKNANDASNNQFGLVLAKLPNKITLAYVNNTKVYNSIVTFKQ SKTAENVLYVVTPKDTSRAEKIATGDTVAISSWFVEATGLRFSSNNVVVDKLTDEQLK AELVAQPEIKSLNENAENMLVIKLTLKSVLIESFRDNPKTIEW" regulatory 79158..79163 /locus_tag="WOSG25_090810" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 79172..79582 /codon_start=1 /locus_tag="WOSG25_090810" /note="COG0394 Protein-tyrosine-phosphatase" /note="Low molecular weight phosphatase family; cd00115" /note="Low molecular weight phosphotyrosine protein phosphatase; pfam01451" /note="arsenate reductase [Lactobacillus coryniformis subsp. coryniformis KCTC 3167]" /note="gene_1470" /note="identified by MetaGeneAnnotator; putative" /product="arsenate reductase" /protein_id="GAK31383.1" /transl_table=11 /translation="MQLYFLCTGNSARSQMAEGFAKQYAPKDWQIKSAGIEQHGLNPL AVAVMQESNIDISMQTSDLIDLAYLNSSDYVITLCGDARDKCPIAPAAVKRRHWPLLD PARPYDSADEELAMFRLTRDKIERLVNELIQNIR" CDS complement(79653..80243) /codon_start=1 /locus_tag="WOSG25_090820" /note="gene_1471" /note="identified by MetaGeneAnnotator; putative" /product="putative membrane protein" /protein_id="GAK31384.1" /transl_table=11 /translation="MNKNRVEAFTDAIIAIIATIMVLEFKTPTSYGLDGIIEELPYLF AYGTSFFFILVAWYNHHYMFALIERVTKKVYWLNNLWLFTMSLLPVSTAWVGRFVDKA IPEWFYFFTVFIWTLAYIWLTLAIVADLKQTNQAKAQKVLNMPAIKFLSSWYVMLTSV IVLIAVAFFPPIVLIMTILELISMAILTPADSDRVA" regulatory complement(80252..80257) /locus_tag="WOSG25_090820" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" regulatory 80407..80412 /locus_tag="WOSG25_090830" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 80421..81557 /codon_start=1 /locus_tag="WOSG25_090830" /note="gene_1472" /note="identified by MetaGeneAnnotator; putative" /product="oxidoreductase domain-containing protein" /protein_id="GAK31385.1" /transl_table=11 /translation="MEIITIKAAIVGCGVISDIYIQSLQEKFKIIDLVACFDLNQERM LATAERYQLKALSYEAILADPQIEMIINLTNPKAHYDVIKQALLHDKHVFSEKMIAVE LAEGAELCQIAKDRNLRLGLAPDTFLGAGIQTANYILEKGLIGQPLSAVVSLNRDFNI YADIFPHMNQKGGTLPFDTGCYYMTALASILGPAKRVTAFGRTYKPDRIGRRVDRPWF GEASQVKAENILTAVVEYANGVLCTVHFNSENILSEEPELKIFGDEGILKLGDPNNFD SINILQKPMNEGTEFPFTHGFRENSRGVGAAEMAWSIVKGRPHRASMEMGYHVFELLH GMYIGAQQGKIYELQSSFEKPAPLPTGYVDNGFWGPTQEIALAF" regulatory 81597..81602 /locus_tag="WOSG25_090840" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 81611..82075 /codon_start=1 /locus_tag="WOSG25_090840" /note="gene_1473" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31386.1" /transl_table=11 /translation="MQIPSLETVVAQEAKLQFDQFDNDTALEIGYRLVKLAQAEAAPV TIDITRAHQQLFHAALAGTALDNDKWLQRKINTVYNFGSSSLALQIKMTSEQRSLEEA SLLNKFEYAAAGGAFPVNVKGTGLVGTIAVSGMRSEEDHQLIVDCLENYFAQ" CDS complement(82159..83370) /codon_start=1 /locus_tag="WOSG25_090850" /note="gene_1474" /note="identified by MetaGeneAnnotator; putative" /product="MFS transporter, DHA1 family, arabinose polymer transporter" /protein_id="GAK31387.1" /transl_table=11 /translation="MISVNKNRFLNVQVFLLFMLCFLLGLSEFIMVGVLPQIAHAINV PITAVGNLVSYFAIAYVILAPFGAALSSRFQRFPLLLTLLIFFLSGNMLAAISWNYWS LVVARLIGASVAGTLTAVALTFAPDLVDLANRTRFLAWVYSGFSIAAVLGVPIGSFIT NQIGWRVTFWLINVLTILLICAVYVTIPRTSAVVTQNKTNIFTQFKIFTDLRILLACG IVVFGAAGTYSFYTYITPLLINYIHIPKTWSGLGLVVIGLAGLCGNIYSGKLAAQGSG IEPATKLWKVLLAQLLALIIFTLVMNNFIALSLVLLSLSLMMYLQNSPAQVLFVDVQA STGLGSTNLAAALQSIAWNGGIALGSGFASLIVAHIGMRWIGLSGVTFAILALLCVGA LGRLKNHLVHA" regulatory complement(83380..83385) /locus_tag="WOSG25_090850" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS complement(83592..84170) /codon_start=1 /gene="cadD" /locus_tag="WOSG25_090860" /note="fragment" /note="gene_1475" /note="identified by MetaGeneAnnotator; putative" /product="cadmium resistance protein CadD" /protein_id="GAK31388.1" /transl_table=11 /translation="MTALTVGIPLFFATNVDTLLLLLSMLLLYPVHTIVLSQLAGAIT VIALANLASQILNHLVPTWSLGLLGIIPIILAFRVNVDLPIKQDILKKSGAYWLIYML YLSSSSDNLISYSAVFTASSLANRLAISAILLILTGLLPVIMQIIYSHTFIKSHLIRY QAIITRVAYFTIGIYILFITAIIPHLIQLLLR" regulatory complement(84182..84187) /gene="cadD" /locus_tag="WOSG25_090860" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS complement(84326..86134) /codon_start=1 /locus_tag="WOSG25_090870" /note="gene_1476" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31389.1" /transl_table=11 /translation="MLQMATRLANHNYDWVEWIRQYPNLVPLTALYTGFLHLSSWTGL PFLAVFYSFNVAVTSAIVGLTFYLIWRHNQNIAVIAAGFAIITPFFYTFLLNVGYSDG PAILISLALALIYDSAEHKGTFKWLAASLTVILFGAAYLMRPNIIILLVAFLLMLLLS FKNRKQNFTFQLNLRMLASSFVGLILASQVSRWLFTIFHYDKNNADVFPTLHWIYMGL NPTSGGKYSTADRYYTLLHHGYKTAAQADWAGILHRFAEYNPITLILHWLAKFFTLWS SGTFQTSTDYQIRWQSAPSFLLNHMLTLDVLNESFTKALIALLLFSIVVKLYRMKKLQ VNLMLLVLLFIIGISLFHSLIWEVKIRYQFMTIGLLLFAGYQNLADLIEQPLKFNKFK ELTQKNTWALIALPILGGISLLTMNLIPSNHLLSPVSSYRWAQSSIQKQNDHTFIEQG QQISQIVPLGVKSSNLQLVTEYSQPLVLYIDRWQANQWQPVLESKIPAHSLVKNISYP FAAGKYRITLQNNTIYPAEVAVAQKSYTTPNRLLATNPQGDNSTLVFTFWRSSNQRAV YTPTLIGSFTGIIAVTWLMLAYPRWQAFQQVKRKNK" regulatory 86634..86639 /gene="cspA" /locus_tag="WOSG25_090880" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 86649..86849 /codon_start=1 /gene="cspA" /locus_tag="WOSG25_090880" /note="Cold shock protein [Exiguobacterium antarcticum B7]" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein; cd04458" /note="DNA-binding site [nucleotide binding]" /note="RNA-binding motif" /note="gene_1477" /note="identified by MetaGeneAnnotator; putative" /product="cold shock protein CspA" /protein_id="GAK31390.1" /transl_table=11 /translation="MEQGTVKWFNSEKGFGFIARESGDDVFVHFSAIQTDGFKALEDG QKVSFDVEEGNRGLQAVNVNKI" regulatory 87273..87278 /locus_tag="WOSG25_090890" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 87285..88310 /codon_start=1 /locus_tag="WOSG25_090890" /note="gene_1478" /note="identified by MetaGeneAnnotator; putative" /product="NADPH-quinone reductase" /protein_id="GAK31391.1" /transl_table=11 /translation="MMMEQNTSRMQALVTTDNQAKPLALMDIPRPVPNAEDILVRVFA SGINPVDAKQREQANKLGASRVLGFDGFGEVVALGERVANFKVGDQVFYAGQLNRTGS NAEYEVVDARIAALAPKNVSPAAAAAMPLTFLTAYELLHDHFKLEMQMQAAKGKRLLI INGAGGVGLVMIQLAKWLGMEVIASASRPETVQLVNDFGADQVINHRDDYVAVVKSLN LAPVDYIAILHQPEQHIEAAAELIAPFGHIGAIVEPKAPLEVRKLKNKSASLDWEFMF TKTNTGYAVASQGQALALLSELMENGQILSTLTETMSGLSVEVVEKAQNQVAAGTGLG KVVVTFD" regulatory 88382..88387 /locus_tag="WOSG25_090900" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 88394..89284 /codon_start=1 /locus_tag="WOSG25_090900" /note="gene_1479" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31392.1" /transl_table=11 /translation="MAWKEIQENIEQNRLRRVEIKAQAQKIFKRDWLGNLSLWLMPFV TMALGLFLLGALIGGFVRVKSTMALIGVLLLFFLGLFLIGLIVSYGLQVIQYRALAQW RDSTTKAAPFTSYFQQFLQIDWLKRSILVAFVTGIFIILWGLLPYLLNYAAGVLTGLA FMTGSMGADSSGLIGWAWIVRLGSWALFALLIYKILGYTFGPYFMLDAKLRDRSLGGR TMLKQGLALVKGHRFELLTAVASFFWWFMLVILVEFLLFRFVNDIVAVLAFALLWSYI GSYITLTWTGYYETLKATSK" regulatory 89446..89451 /locus_tag="WOSG25_090910" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 89460..91568 /codon_start=1 /locus_tag="WOSG25_090910" /note="ATP binding site [chemical binding]" /note="ATP-binding subunit of chaperone [Weissella paramesenteroides ATCC 33313]" /note="ATPases associated with a variety of cellular activities; smart00382" /note="C-terminal, D2-small domain, of ClpB protein; pfam10431" /note="COG: COG0542; Pfam: PF00004,PF02151,PF07724; InterPro: IPR003593" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC; cd00009" /note="UvrB/uvrC motif; pfam02151" /note="Walker A motif" /note="Walker B motif" /note="arginine finger" /note="gene_1480" /note="identified by MetaGeneAnnotator; putative" /product="ATP-binding subunit of chaperone" /protein_id="GAK31393.1" /transl_table=11 /translation="MAQDPFAFSNFDDIFRMMNSDAARMQQAERERMLQAQAMQQQQQ AKGQATGNEQGNLLEQFGINLTQLAREGKFDPVIGRDNEIKRVIEVLNRRTKNNPVLI GEAGVGKTAVVEGLAQAIVDGSVPAKLANKEVIRLDVVSLVQGTGVRGQFEERMQQLM KEVTQRADVILFIDEIHEIMGAGTAGEGSLDAGNILKPALARGEFQLIGATTLSEYRQ IEKDAAIARRFQTIQVNEPTAAEALLILQGIRARYEAYHQVHYADDALAAAVNLSSRY IQERFLPDKAIDLLDEAGSRKNLTLKVANPEDLKQQIHNAEAQKQSAVEHEAFERASK LRDEINRLELQLEAIEQQAPQKIDAAMVTVADIQKIVEERTGIPVGDLQAAEQSQLQN LADNLAQHVIGQSEATNKVARAIRRNRVGFNKTGRPIGSFLFVGPTGVGKTETAKQLA KELFGTADNMIRFDMSEYMEKHSVSKLIGAPAGYVGYEEAGQLTEAVRRHPYSLILLD EVEKAHPDVMNMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGVQSPKVGFEAEK VATDKQSKADVLHRLAPYFRPEFLNRFDGIIQFNPLNKRDLLNITSLMLADMNKTVAE HGLQVTVSKAAEERLVELGYDPNMGARPLRRVIQEQLEDQIADFYLDHPTQKALVADL EDNKITIKAAKPAVTKVKAS" regulatory 91984..91989 /locus_tag="WOSG25_090920" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 92000..92854 /codon_start=1 /locus_tag="WOSG25_090920" /note="gene_1481" /note="identified by MetaGeneAnnotator; putative" /product="putative N-acetylmuramoyl-L-alanine amidase" /protein_id="GAK31394.1" /transl_table=11 /translation="MNSIKGSLLVAAGAVATIAGSQVVASADTTYAVKSGDTLYSIAA RYNSSVNAIAQANGISNTNLILTGQNINIPGADSNTTNNNSNNSNNNNAGNTSSSASY TVVSGDTLYGIASKHGMTLASLVQLNNLNPAQVIFPGQVLNLSGNGSSTDSNSSANTD TNANTNSNSNQNNTVVDTTNTYPYGQCTWYVKSQLSWVGNYWGNASSWAASAVSAGHT VSSVPTAGSVAYFGPGVQGADATYGHVAVVDSVNANGTVNISEANYLGLIYHTRTIST SGLLFIHQ" regulatory 92906..92911 /locus_tag="WOSG25_090930" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 92920..93450 /codon_start=1 /locus_tag="WOSG25_090930" /note="gene_1482" /note="identified by MetaGeneAnnotator; putative" /product="cell wall-associated hydrolase" /protein_id="GAK31395.1" /transl_table=11 /translation="MQTHYEFGHIWVTEADDEIKAELFYSRSKAGKGFEITELRKTAD MQDSGIERQLMAGMMDYLKSQLWDWIDSYQGRPFLSADGRYDVMGFMQDFYGEVFGVD ITDNLTGMVDQMTAVPLDALIPGDAVFWGLETEPHQVAIYLGGGKIMTVAVSDGKIIE QALQRYDQPSFARTLR" regulatory 93455..93460 /locus_tag="WOSG25_090940" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 93469..93750 /codon_start=1 /locus_tag="WOSG25_090940" /note="gene_1483" /note="identified by MetaGeneAnnotator; putative" /product="acetyltransferase" /protein_id="GAK31396.1" /transl_table=11 /translation="MEFQYELGRLWHADAQGVVDAELRFSIINDGATWSIDEIRVAFE LRGRGIASEILAQLVERARNARITLKPVCSYARMQFLKRADYQALQYKD" regulatory 93835..93840 /gene="dut" /locus_tag="WOSG25_090950" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 93849..94388 /codon_start=1 /gene="dut" /locus_tag="WOSG25_090950" /note="COG: COG0756; Pfam: PF00692; InterPro: IPR008180" /note="Trimeric dUTP diphosphatases; cd07557" /note="dUTP diphosphatase [Weissella paramesenteroides ATCC 33313]" /note="gene_1484" /note="identified by MetaGeneAnnotator; putative" /note="trimer interface [polypeptide binding]" /product="dUTP diphosphatase" /protein_id="GAK31397.1" /transl_table=11 /translation="MKRGFAIVDRFKDAQLSLPSRATQHAAGYDFAAAEDFELPSIWR LNFIKILWQIWQQKSPSADDLAAGQAVLKPYLVPTGIKAYMQDDEVLILANRSSNPLK RSLILPNGIGVIDADYVDNPQNEGEIFVQLLNFSLGTVKIKKGDRIAQGIFMPFLLTD SDQTAKKQARVGGFGSSGN" regulatory 94388..94393 /locus_tag="WOSG25_090960" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 94405..95772 /codon_start=1 /locus_tag="WOSG25_090960" /note="ATP binding site [chemical binding]" /note="DNA repair protein RadA [Lactobacillus rhamnosus GG]" /note="DNA repair protein RadA; Provisional" /note="Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of...; cd01121" /note="Subunit ChlI of Mg-chelatase; cl12214" /note="Walker A motif/ATP binding site" /note="Walker B motif" /note="gene_1485" /note="identified by MetaGeneAnnotator; putative" /note="strain coidentity: ATCC 53103 = GG; synonym: Lactobacillus rhamnosus ATCC 53103" /product="DNA repair protein RadA" /protein_id="GAK31398.1" /transl_table=11 /translation="MAKQKTQFVCSNCGYVSQRYMGRCPNCGAWGTLVEEVMQPEKAD RKSRVNLAGEIAQVQKLTEVNIEETPRVQTNLAEFNRVLGGGVVPGSMVLIGGDPGIG KSTLLLQISGQLASTGTVLYVSGEESASQIKLRAERLGVEPDADFFLFPETDMSRIRK AIDEVKPSYVIIDSIQTMQQPDVQSAVGSVAQIRETTAELLQIAKTNGITIFIVGHVT KEGAIAGPKILEHMVDTVLYFEGDNQRAYRLLRAVKNRFGSTNELGIFEMEQTGLIEV ANPSDIFLEERLANASGSAVVIAMEGTRPIMVEVQALLTPTVFGNAQRTAAGIDRNRV SVLMAVLEKRANLLLQNQDAYIRAAGGVRLDEPAIDLAVAIAIASSYKDVGTQATDAF VGEIGLTGEIRRVPRINERLLEAEKMGFKRVFVPKSVANDLDEVSLQIVPVATLADAL RLALN" regulatory 95780..95785 /locus_tag="WOSG25_090970" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 95792..96898 /codon_start=1 /locus_tag="WOSG25_090970" /note="COG: COG4956; Pfam: PF01850; InterPro: IPR002716" /note="Integral membrane protein (PIN domain superfamily) [General function prediction only]" /note="PIN domain of Thermus Thermophilus Hb8, uncharacterized Bacillus subtilis YacL, and other bacterial homologs; cd09877" /note="PIN domainsuperfamily" /note="gene_1486" /note="identified by MetaGeneAnnotator; putative" /note="integral membrane protein (PIN domain superfamily) [Weissella paramesenteroides ATCC 33313]" /note="putative active site [active]" /product="integral membrane protein" /protein_id="GAK31399.1" /transl_table=11 /translation="MLRKRLILGAYALVGGGLAISILPILWRIFKIEHLIWLANPVTD FIIGAFILFVIGIYTWRLVDRGLHQLEVVLNKQSPLTLLVSSVTTIIGLALAVLISTP LTRMNNFFFSAIIPVILLGLFGYLGFRLGSTRIDEWRTLIPSLAKRTRIRPRKSDNGS DLLTDEETNYHHYKILDTNILIDGRIADLVKTGFIEGTLLVPNFVLYELQYIADAGES IKRVRGRRGLDILNELRETDAVPLEMWEGDYDDIKEVDEKLIRLAKDVNGILVTNDYN LNKVVTFQNVEVLNINELAGALRPRVVVGDKMRVQLVRNGTERKQAVGYLDDGTMIVV EDGRNHLQENVTVEVTSSLQTDAGRMIFGNLVEN" regulatory 96966..96971 /gene="gltX" /locus_tag="WOSG25_090980" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 96981..98471 /codon_start=1 /gene="gltX" /locus_tag="WOSG25_090980" /note="COG: COG0008; Pfam: PF00749; InterPro: IPR004527" /note="HIGH motif" /note="KMSKS motif" /note="catalytic core domain of discriminating glutamyl-tRNA synthetase; cd00808" /note="gene_1487" /note="glutamyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]" /note="glutamyl-tRNA synthetase; Reviewed; PRK01406" /note="identified by MetaGeneAnnotator; putative" /product="glutamyl-tRNA synthetase" /protein_id="GAK31400.1" /transl_table=11 /translation="MADKKKVRVRYAPSPTGHLHIGNARTALFNWLYARHNKGEFVIR IEDTDTARNVADGEQSQLDNLKWLGLDWDESPANPGKYGPYRQSERLAIYKPLIQELL DKGLAYKSYKTSEELTAEREAQIAAKEAPHYVYEYANMSAEEIATVQARAEDAGLKPV VRFRVPVEKTYAWDDIVKGHVEIGANQVGGDWVIQKADGMPTYNFAVVVDDHMMEISH VLRGDDHVSNTPKQLMIYEAFGWEAPIFGHMTLIVNSETGKKLSKRDETILQFIEQYR NLGYLPEAMLNFIVMLGWAPVGTEEIFTKQQLVKIFDETRLSKSPAKFDSKKLAWVNN QWIKKADEPRVFAQMVENLISAGLVTAEELSTERMQWLRSVINMYKEGVSYTSEIVDL VKPVFFAMPAADEIPASAKEWMAADTARPALELFAQKLAAMPVFLSVDILKAIREVQN ELGIKGRELWNPLRIATTRQEDGPNLGDLIELLGREQAIANINEFL" regulatory 98621..98626 /gene="secA" /locus_tag="WOSG25_090990" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 98634..100997 /codon_start=1 /gene="secA" /locus_tag="WOSG25_090990" /note="ATP-binding site [chemical binding]" /note="COG: COG0653; Pfam: PF07517,PF01043,PF00271,PF07516; InterPro: IPR000185" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; cd00079" /note="SecA preprotein cross-linking domain; pfam01043" /note="gene_1488" /note="identified by MetaGeneAnnotator; putative" /note="nucleotide binding region [chemical binding]" /note="preprotein translocase subunit SecA [Weissella paramesenteroides ATCC 33313]" /note="preprotein translocase subunit SecA; Reviewed" /product="preprotein translocase subunit SecA" /protein_id="GAK31401.1" /transl_table=11 /translation="MANPLRNIIESDKKEMLRLNRIADQVEAYQDEMATLSDTELKAK TPYLRQLLKDGKTLDDILPEAFAVVRESARRVLGLYPFRVQIMGSAVLHGGNISEMRT GEGKTLTATMAVYLNALPAQGVHVVTVNEYLAARDGEEMGELYQWLGLTVGINTSEKS ASEKRDAYNADITYSTNSEIGFDYLRDNMVANKEDRVQRSLNFALVDETDSILIDEAR TPLIISGAPEQENTQLYIRADRFVKSLVAEDDFKVDMEAKTVLLQNEGIKKAERYFNL DNLYGASNTALTHHIDQALRANYTMDNNKDYVIRDGEVVLVDSFSGRIQEGRRFSDGL HQALEAKEQVQIQEDNRAMASITYQNLFRRYKKLSGMTGTAKTEAEEFREIYNMEIIT IPTNRPVRRVDDQDLLYPTLHAKFNAVVALIKKLHAKGQPMLIGTVAVETSEMLSSML DAQGIAHNVLNAKNHAREAEIIANAGQKSAVTIATNMAGRGTDIKLGPGVAALGGLAV IGTERHESRRIDNQLRGRAGRQGDNGYSQFFLSLEDDLMVRFGGERIRLMMERMNLDE SDAVIRNRLITRSVESAQRRVEGNNYDSRKNVLQYDDVMSQQRNTFYENRNAVIDEEN SLVDVILPMAERTIKRVVDSHTIGKPEEWNLKPVVDFAGAILVNEGEVTLADLEKKSQ TEIEDYLYGLAKDVYLAKEAQLADADQLLQFSRVVVLRVADARWTDHMEAMNELRDAI QLRGYGQLNPLIEYQNEGFQMFEEMIADIEYDVTRLFMKAEIRQNLR" regulatory 101127..101132 /gene="prfB" /locus_tag="WOSG25_091000" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 101139..102254 /codon_start=1 /gene="prfB" /locus_tag="WOSG25_091000" /note="COG: COG1186; Pfam: PF03462,PF00472; InterPro: IPR004374" /note="RF-1 domain; pfam00472" /note="This domain is found in peptide chain release factors; smart00937" /note="gene_1489" /note="identified by MetaGeneAnnotator; putative" /note="peptide chain release factor 2 [Weissella paramesenteroides ATCC 33313]" /note="peptide chain release factor 2; Validated; PRK00578" /product="peptide chain release factor 2" /protein_id="GAK31402.1" /transl_table=11 /translation="MELSEVRHELELMNDEIVRFGDSLDLDALNDEIAANEHQMVMPD FWNDNLAAQKVIDGNNVLKERRDNYLKLTQAVENIATALELLSELPDDEMQAEMEADL KQLALDLESYRLAQLLNEPYDANNAILEIHPGSGGTESADWGANLQRMYTRWAEKHGF KVDLMDYHPGDVAGIDSATLMITGHNAYGYLRSERGVHRFVRISPFDSAGRRHTSFVS IDVMPELDDSVEIDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGIVVASQQQ RSQFQNKDTAYGMLKAKLYQLEMDKKEAERAAISGTQLENGWGSQIRSYVFQPYRMVK DHRSNYESGNPQGVMDGDLDPFINAYLRWKLAEQNPD" regulatory 102506..102511 /locus_tag="WOSG25_091010" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 102520..103482 /codon_start=1 /locus_tag="WOSG25_091010" /note="COG: COG4975; Pfam: PF06800; InterPro: IPR010651" /note="DMT superfamily drug/metabolite transporter [Weissella paramesenteroides ATCC 33313]" /note="Sugar transport protein; pfam06800" /note="gene_1490" /note="identified by MetaGeneAnnotator; putative" /product="putative glucose uptake permease" /protein_id="GAK31403.1" /transl_table=11 /translation="MSILIALIPAIAWGSVGIVTTKMGGSAAQGTLGMTIGALVFGLG TMLIYVLPVAGSDYAFNPKIWVVGVVSGLFWAVGTAGQFIGFKKLGVSIGNPISTAGQ IIFNAIMAAAVLGDWTSSRMWLFGLIAIAMVALGAYFTSIPDANAPKQMNIDFSWSAG LLAMLISTLGYMMYFVFPNLLAKIGYISASLKAGPHGSADGLYYMTSIVGPQSIGQVV GALIIVIFFMKEREIFAKATWRNVVTGLVWAVGNVFMFISAANPKIGQATAATLSQMG IIVGVFGSIWILGERKSKRQMVFIIIGVILVALGGVVISNLANI" regulatory 103718..103723 /locus_tag="WOSG25_091020" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 103731..104747 /codon_start=1 /locus_tag="WOSG25_091020" /note="gene_1491" /note="identified by MetaGeneAnnotator; putative" /product="methicillin resistance protein" /protein_id="GAK31404.1" /transl_table=11 /translation="MPLLDMNDSDALARYNDFVRQSPFAQITQDLAWAEVKNNWTPRY VYLEDADKQIIAALSILMIKQANGKMFAYASKGPVMDMQDLDLFDRLMQEAKLALAND DVYVLKVDPEISYSDELNAQLQARGYVTRNRGLKGGMHATIQPRLNMVMDLTVKPDAE TAFDFVPSKTKNKLRRPFRDGIVVDFGLEQSDLDDFYMTYEIMSQRHGITYRPKDYFQ RMVDAFVGTDMMRIYRARFEEQTIGTGIAFKIGSKIWYMYAGTIDDAPVNGAAYAIQV EMIQWAIDSHMPLYDLGGIEKEDVEDSLWKFKHNFVRGAAQEYIGEIDLVLDEASYEA SYAD" tRNA 104878..104967 /anticodon=(pos:104914..104916,aa:Ser,seq:tga) /locus_tag="WOSG25_091030" /note="identified by tRNAscan-SE; putative" /product="tRNA-Ser" regulatory 105042..105047 /locus_tag="WOSG25_091040" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 105058..105828 /codon_start=1 /locus_tag="WOSG25_091040" /note="COG: COG0566; Pfam: PF08032,PF00588; InterPro: IPR001537" /note="RNA 2'-O ribose methyltransferase substrate binding; smart00967" /note="RNA methyltransferase [Weissella paramesenteroides ATCC 33313]" /note="SpoU rRNA Methylase family; pfam00588" /note="gene_1492" /note="identified by MetaGeneAnnotator; putative" /note="rRNA methylases [Translation, ribosomal structure and biogenesis]; COG0566" /product="RNA methyltransferase" /protein_id="GAK31405.1" /transl_table=11 /translation="MEKLSSVQNSRVKAWQKLQSKKGRQASQTYLLDGWHLVEEAIKH DGKLHAIMATPEQLAQHQDELPLGVPVFEINDDIAKKLSDLVTPQGIFAEVTLPVASR SPQFIHDGAWLFLDGIQDPGNIGTMVRTADAAGYSGVVFGQGTVDPYSAKALRAMQGS QFHLTLTVGDLAEWTAAFTQNGLNVYGTKLDPSAADLFTIPAQSQFALIMGNEGQGMR TDLAEMTTQNLYIPLTGQAESLNVAVAAGIAMFALKNR" regulatory 105858..105863 /locus_tag="WOSG25_091050" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 105872..106354 /codon_start=1 /locus_tag="WOSG25_091050" /note="COG: COG1418; Pfam: PF01966" /note="HD superfamily metal-dependent phosphohydrolase [Weissella paramesenteroides ATCC 33313]" /note="Predicted HD superfamily hydrolase [General function prediction only]" /note="gene_1493" /note="identified by MetaGeneAnnotator; putative" /product="HD superfamily metal-dependent phosphohydrolase" /protein_id="GAK31406.1" /transl_table=11 /translation="MQAQKWQKDTVYLEIVGDLLAHPQVQLLKNYVQHHHSDRLQHSI DVSYLSYRIALRYGLNATAVARAGLLHDLFFYDWRVTKFELGTHAFIHPRVAFRNAEK ITALSPMEKDIILKHMWGATSALPHFRESLLVDLVDDWVALVDFFAPKWRKIRNLLKK " regulatory 106438..106443 /locus_tag="WOSG25_091060" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 106453..106803 /codon_start=1 /locus_tag="WOSG25_091060" /note="COG: COG1733; Pfam: PF01638; InterPro: IPR002577" /note="Helix-turn-helix domains; cl00088" /note="gene_1494" /note="identified by MetaGeneAnnotator; putative" /note="transcriptional regulator [Weissella paramesenteroides ATCC 33313]" /product="transcriptional regulator" /protein_id="GAK31407.1" /transl_table=11 /translation="MTAATEQKVSEGNCADAVICDKFTATFNILGRKWNGLIIEVLLN EGPSRFKDLSRAVINCSDRVMVERLKELEEADLIERRTYEDSSLIEYALTERGESMRP MMEAIHTWSDKWNS" regulatory 106863..106868 /locus_tag="WOSG25_091070" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 106877..107236 /codon_start=1 /locus_tag="WOSG25_091070" /note="gene_1495" /note="identified by MetaGeneAnnotator; putative" /product="putative membrane protein" /protein_id="GAK31408.1" /transl_table=11 /translation="MFALGLSMLVGLEALYIMILEMFMSAEKQAAVFGIDKKVLNIKE VRSLLANQGIYNGALGALILVVGIFFMANAGKIFLSLLMVYIVIVALYGALTVNKKIA LVQGLPALVALLALIFS" regulatory 107517..107522 /locus_tag="WOSG25_091080" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 107530..108573 /codon_start=1 /locus_tag="WOSG25_091080" /note="Aminoacyl tRNA synthetase class II, N-terminal domain; pfam02912" /note="Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain. PheRS belongs to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure and the presence of three characteristic sequence motifs. This domain is primarily responsible...; cd00496" /note="dimer interface [polypeptide binding]" /note="gene_1496" /note="identified by MetaGeneAnnotator; putative" /note="motif 1" /note="motif 2" /note="motif 3" /note="phenylalanyl-tRNA synthetase subunit alpha [Lactobacillus rhamnosus GG]" /note="phenylalanyl-tRNA synthetase subunit alpha; Validated; PRK00488" /note="strain coidentity: ATCC 53103 = GG; synonym: Lactobacillus rhamnosus ATCC 53103" /product="phenylalanyl-tRNA synthetase alpha subunit" /protein_id="GAK31409.1" /transl_table=11 /translation="MSLADELQALKKQALNEIKDSVDNLKELNQVRVNWLGKKGPITE VLRGMKDLSAEERPKVGAIANELRDKLADAISIKQAQLEKAALQAQLSAEKLDVTLPG RPLKQGQPHVLQQIIDDLEDQFMGMGYQVLEGPEVETDKFNFEMMNLPKDHPARDMQD TFYITPEILMRTQTSPMQARAMVNHDFTKGPLKMISPGRVYRRDTDDATHSHQFHQVE GLVLDKHITMADLKGTLLAVAHQLFGDDHDIRLRPSYFPFTEPSVEVDVSWGPVTADT KPEDIEWIEVLGAGMVHPNVLRMAGIDADVYGGFAFGLGPDRFAMLKYGVEDIRNFYL NDVRFLEQFTQRG" regulatory 108564..108569 /locus_tag="WOSG25_091090" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 108580..111000 /codon_start=1 /locus_tag="WOSG25_091090" /note="B3/4 domain; pfam03483" /note="COG: COG0072; Pfam: PF01588,PF03483,PF03484,PF03147; InterPro: IPR004532" /note="Ferredoxin-fold anticodon binding domain; pfam03147" /note="Phenylalanyl-tRNA synthetase (PheRS) beta chain core domain. PheRS belongs to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure. While class II aaRSs generally aminoacylate the 3'-OH ribose of the appropriate tRNA, PheRS is an...; cd00769" /note="dimer interface [polypeptide binding]" /note="gene_1497" /note="identified by MetaGeneAnnotator; putative" /note="motif 1" /note="motif 2" /note="motif 3" /note="phenylalanyl-tRNA synthetase beta subunit [Weissella paramesenteroides ATCC 33313]" /note="phenylalanyl-tRNA synthetase subunit beta; Reviewed; PRK00629" /note="putative tRNA-binding site [nucleotide binding]" /note="tRNA synthetase B5 domain; smart00874" /note="tRNA-binding-domain-containing prokaryotic phenylalanly tRNA synthetase (PheRS) beta chain. PheRS aminoacylate phenylalanine transfer RNAs (tRNAphe). PheRSs belong structurally to class II aminoacyl tRNA synthetases (aaRSs) but, as they aminoacylate...; cd02796" /product="phenylalanyl-tRNA synthetase beta subunit" /protein_id="GAK31410.1" /transl_table=11 /translation="MKVSVNWLRDYVDINLPVNELAEKISRTAVEIEGQSQPKGNMKN VVIAKVLSVEPHPDSDHMVITQIDAGEDEPIQIVTGAPNIAVGQTVILAKHNSIIGGG QKIKKSKLRGVMSNGMLAALQELGFDDKIAPKAFEAGIWVFDVTDAASLKPGEDALEV LGLTDDVLETGITPNRADMLSMNGTAFEVAAILEQEVKLPTFELTESAHKTADLLSAT APADLASKYALRVVENVEIKDSPLWLQRRLWTMGIRPINNVVDVTNYMLLMYGQPLHA FDFDSLPNKQINVRTAKAAEQIKTLDGQERLADEQDIIIADGETGLMFAGVMGGESTE VTNATVNVVLEGAVFEASMIRKTAQRQNLHSEASQRFERGVDVEATFVALDHAAALIA QLAGGTVAAGRLVAQDYQYVAPVVKVSVAQANHVLGTQITAATIAKIFDQLKFAYTVE NDEFTVTIPARRWDISLPADLIEEIARLYGYDKLPATLPTGETTPGMLSAKQVLIRAS RHILEGLGLNQAISYVLTTPQKAQDFKLHAGEPIKLDYPMSQDRSQTRSSLLTGLLDD VAYNVARKQKDLALYEQGRVFVSTDPTQLPVEVEHLAGVITGDWTKRTWNQAAQPVDF FTLKGIVMAYLNNLALLDQVEFVASQDYPEMHPGRTAELRLGETVLGFIGQIHPSTAK AYKVNETYGFELDLTAIMAIKQRADQYKAISRYPAISRDLAIMVDKQTEATALLKAIQ QAGGPYLHDVELFDLYTGDNLPAGKKSLAYTLNFVNPAATLVDDDVNVAVEKITQQLT QDFAAELR" regulatory 111096..111101 /gene="pabC" /locus_tag="WOSG25_091100" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 111113..112294 /codon_start=1 /gene="pabC" /locus_tag="WOSG25_091100" /note="gene_1498" /note="identified by MetaGeneAnnotator; putative" /product="4-amino-4-deoxychorismate lyase" /protein_id="GAK31411.1" /transl_table=11 /translation="MQKFEARTTRQDSAKKQRPGGKKPKQSKRMRIIIAVIGLLLVIG IGYAVYYHAEVTNYSALDSSSKREQQIEIKSGTSTKAIATDLKNKGVIRSDKAFLHYI DVKNVAELKAGYYLLSPAMSLSTITTKLSAGGSPYPLNGKGAVTVREGENAEAIAKEV AVETNFSAKEFLAALNDTSFLNRLKAAYPGLLDDAVNAQNVRYKLEGYLYPATYEVKN AANVRQIINQMVAADYEKMSPYFDQIKQSGMTVQQVMTLASLVEREGTSQDNRGIIAG VFLNRIKVNMPLASDVAVKYALDTDKANLSDADVKVNSPYNLYANTGFGPGPFDSPTV SSVEAVLNPKDQDKGYLFFVANLKTGEIYYSKTYDDQLKNTSKVQSANNAAGAASKSS K" CDS complement(112387..112872) /codon_start=1 /gene="greA" /locus_tag="WOSG25_091110" /note="Transcription elongation factor, GreA/GreB, C-term; pfam01272" /note="Transcription elongation factor, N-terminal; pfam03449" /note="gene_1499" /note="identified by MetaGeneAnnotator; putative" /note="necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus" /note="transcription elongation factor GreA [Bacillus licheniformis DSM 13 = ATCC 14580]" /note="transcription elongation factor GreA; Reviewed; PRK00226" /product="transcription elongation factor GreA" /protein_id="GAK31412.1" /transl_table=11 /translation="MAEEKTFPMTLDGKAKIEAELNKLITETRAEITNRIQIARSFGD LSENSEYQSAKDEQAFVEGRINTLQSMLDNSVIIDSSEIAADEVALGKIVTFQELPDE DPETYEIVGAVEADPLAGKISNESPIAQSLIGKTVGDEVTVTLPNNGSMDVKILSVKN A" regulatory complement(112878..112883) /gene="greA" /locus_tag="WOSG25_091110" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS complement(112995..114464) /codon_start=1 /locus_tag="WOSG25_091120" /note="gene_1500" /note="identified by MetaGeneAnnotator; putative" /product="putative membrane protein" /protein_id="GAK31413.1" /transl_table=11 /translation="MLVILVVSLIYLFSRLNKLNFLTQDQLILGVTFFALMLILYILA NNSRWWLAAVSLLAIGEMTVSTIWTLNQFSYLTNTEYQTYIRALQKVSRNFKPNHHTF YRVAQSFQRTKGDPLQGNYFGASTFSSALEHQQSDFMAAIGQPEGDNYVTYNSGTLLT DDLLGMRYLMQPTGNQAEQKGTPSNMATFPRWDTNGIYKIQQTTSDVVVSKNENALPL VFAASPNALNLRFKADDPLTNQNRLWDTLTGYNDNQVFTAVNFNQTSVDNLNAPGTIT GAFLKKNNDDQPASISMTYTPKTDSPYYLSIGGQISADEASITVNGTPIAAIPSHRHT IVLALPAGVAGQPQNITFTLNKNELWLQNVSLYQSDQTAIAQGAEQLKANGITNMTFA DTKITGDINLPANQNLVMTTIPYAKGWQIKIDGHVVTNNKVGGFFLAATTTPGKHHIE LTFEAPYLKAGIIISAGTLLFTLGVLWTESFNQRHKKIY" regulatory complement(114469..114474) /locus_tag="WOSG25_091120" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" regulatory 115870..115875 /gene="pbp2B" /locus_tag="WOSG25_091130" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 115882..117813 /codon_start=1 /gene="pbp2B" /locus_tag="WOSG25_091130" /note="gene_1501" /note="identified by MetaGeneAnnotator; putative" /product="penicillin-binding protein 2b" /protein_id="GAK31414.1" /transl_table=11 /translation="MQITHHTLYEDAVSSNTTSIQEENVQRGEIFDSQGKLLVSNSGT HSIQYTKPQNVTNEQMYSVANNVGKFVKISTDQLSTGNYAAYYILDSSRAKDVAKKAK LQYAPTTDVFVNKAKAYVADHKDEFPLTAKQENAAMIFQKMANAYSLSTVQIKTSDVS DEEIAAIGERQSTMPGINVGMYYTRSYPAGDGIKSLVGTEGKVPDDSLNQLLSEGYSR DDMVGTSFLEKEYEAQLKGAKRRVQITTDPKTDETKSKVLYKGKVGSNLILTLNSKFQ DDVRQIITSNMPTGPATGGYAVVLNPKTGGVYAMVGVDRNNQNGQLTDNDAANVNKAQ VMGSVVKPAMITTAMMRGVITPSNNTLTDQPIKIAGTASKSSWFNSDGNHNTALTAPE ALEVSSNSYVMQLMLKMGGLNYSPGMGLSGLNTSIFGIMRNGLARFGMGVKTGIDLPG ELSGLKGPTTASDIGLALDESFGQYDTFTTIQLAQYVSTIANGGYRIQPHLVEAIQQP GTNGAKSTLESIPTKVLGTVGWTEAERNIIWSGMNLVSHGTSPYVTGGSKIKTLPVNV SMKTGTAETFTNGASTTANTAISFVPNSNVAVAVVYPDVAAGNTSDPNITATYQIWQK VLDDIEDKDALNASTNTNS" regulatory 117919..117924 /locus_tag="WOSG25_091140" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 117930..118487 /codon_start=1 /locus_tag="WOSG25_091140" /note="gene_1502" /note="identified by MetaGeneAnnotator; putative" /product="5-formyltetrahydrofolate cyclo-ligase" /protein_id="GAK31415.1" /transl_table=11 /translation="MDKKIARAQALVNLQNLTDGQRARAMQLLVKQVTQLTAWQKAKT VALTLGQGAEIPTDLLVQTALLQGKEVSLPRVLPKRQMEFVKINQATSYYRHSFGMLE PVDGPLIEATDIDFVLVPGLAYTKAGDRLGFGGGYYDRWLPQTKATKVAVTLAVNYQA KAYWPKEPTDVQVDQILVIDERSLS" regulatory 118472..118477 /locus_tag="WOSG25_091150" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 118487..119200 /codon_start=1 /locus_tag="WOSG25_091150" /note="gene_1503" /note="identified by MetaGeneAnnotator; putative" /product="peptidase S54 family protein" /protein_id="GAK31416.1" /transl_table=11 /translation="MQELKAEFKIQPVNLILVGIMIMLYGAEVIVSRSTTISTQILYN FGANFAPAVIFNHQWWRLFTAGLLHVSFFHIVFNLIVMYWIGRLLERALGSMRYLILF VFANILGNLFTLALGDLRAISAGASGAIYGMFGSLIILGILAHWRGFWGEQAKTIGLL VVLSLVGNLFSTGIDLWAHIGGIIAGAVLTPLLLKNQALQASNQRPELLKSGSVILII GMIGILIMIGVSHGNAYFS" regulatory 119166..119171 /locus_tag="WOSG25_091160" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 119178..119387 /codon_start=1 /locus_tag="WOSG25_091160" /note="gene_1504" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31417.1" /transl_table=11 /translation="MAMRTFLDVLDLLKNYDVYIHIGKRLWDIEVAALEIDNLYKAGL LDVKEYGQIKLVLAHEHELEERKNK" regulatory 119478..119483 /locus_tag="WOSG25_091170" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 119493..120470 /codon_start=1 /locus_tag="WOSG25_091170" /note="COG1940 Transcriptional regulator/sugar kinase" /note="Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; cd00012" /note="ROK family protein (putative glucokinase); TIGR00744" /note="gene_1505" /note="glucokinase [Weissella koreensis KACC 15510]" /note="identified by MetaGeneAnnotator; putative" /note="nucleotide binding site [chemical binding]" /product="glucokinase" /protein_id="GAK31418.1" /transl_table=11 /translation="MVKDKLIGIDLGGTTIKFAILTVEGEIQQKWSLRTNILDEGTHI VPDIIESINHHLDLYQLDRERVLGIGMGTPGTVDIENGTVQGAFNLNWSNLQTVRQDI ETATSLPLTLDNDANSAALGEQWRGAGNNEPEVVFITLGTGVGGGLINEGKLIHGLNG AAGEVGHIIVQPYGYQCTCGNYGCLEQYASATGVVHLAQDFAEEYVGTSKLKAMIDNG EEVTSKIVFDLAKEDDYLANEVVNKVAYYLGLATANIANILNPSSIIIGGGVSAAGNF LLERVQKNFFEFAFKTTRDATKVKLAELGNDAGVYGAASLAKNSKRVLA" regulatory 120563..120568 /locus_tag="WOSG25_091180" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 120575..121060 /codon_start=1 /locus_tag="WOSG25_091180" /note="gene_1506" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31419.1" /transl_table=11 /translation="MELTGNEFIELLKNEQYTKKSFTAADTEDIELDDFFAFVTKTLE LNQLVSAEMIISGEEPIILRLESSLINLPLRYVNAISKIVINDPARELNLYMIVEHPL VSHSGLRIDLAASVAAYLDDPDSVANKIASFFTEKIKAIQVASEEAEDEKTEDAKTTD E" regulatory 121074..121079 /locus_tag="WOSG25_091190" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 121087..121623 /codon_start=1 /locus_tag="WOSG25_091190" /note="gene_1507" /note="identified by MetaGeneAnnotator; putative" /product="putative membrane protein" /protein_id="GAK31420.1" /transl_table=11 /translation="MNNRSMGSWLAGLVISILIYYFFSAYLGLPFPRYRMEISLANPW LNFVAMILGPIAAGLAAFFGQILAGLGTNTIWWTWIIADGIYGLLLGLLVKRLAFDRF RLTFKRYMIFNFWQIIANILVWLVLAPLGDIWVYGSYSQLVFSQGAITMLVNIFGNAT IGIIMVLLYQKISKLELV" regulatory 121843..121848 /gene="folD" /locus_tag="WOSG25_091200" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 121854..122744 /codon_start=1 /gene="folD" /locus_tag="WOSG25_091200" /note="COG: COG0190; Pfam: PF00763,PF02882; InterPro: IPR000672" /note="NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase; cd01080" /note="NADP binding site [chemical binding]" /note="Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; pfam00763" /note="bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional" /note="bifunctional protein: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase [Weissella paramesenteroides ATCC 33313]" /note="gene_1508" /note="homodimer interface [polypeptide binding]" /note="identified by MetaGeneAnnotator; putative" /note="substrate binding site [chemical binding]" /product="methenyltetrahydrofolate cyclohydrolase" /protein_id="GAK31421.1" /transl_table=11 /translation="MAKIIDGKAIAKKLRAVVKAQTEQLKQKGVIPGLVVILIGNDPA SEIYVRNKERAAEKVGVNARTIKYPASATEAEVLAKIEALNQDEQVDAILVQSPMPAQ FNSEVIQAAISPAKDVDGFHPLNIGKLFANRSGYYPVANTPRGIMTMLKHEGVALAGK NILVVGRSILVGRPMFALLERANATVTLAHRYTPIDTLKLLAQQADVVIVATGVVNLI QGSDLKAGAVVIDVGINRLADGKLVGDVDFSSASQVASAITPVPGGVGPMTIATLLQT TVELAGQHHDIEMEQAWQNI" regulatory 122718..122723 /gene="xseA" /locus_tag="WOSG25_091210" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 122729..124003 /codon_start=1 /gene="xseA" /locus_tag="WOSG25_091210" /note="COG: COG1570; Pfam: PF01336,PF02601; InterPro: IPR003753" /note="ExoVII_LU_OBF: A subfamily of OB folds corresponding to the N-terminal OB-fold domain of Escherichia coli exodeoxyribonuclease VII (ExoVII) large subunit. E. coli ExoVII is composed of two non-identical subunits. E. coli ExoVII is a...; cd04489" /note="exodeoxyribonuclease VII [Weissella paramesenteroides ATCC 33313]" /note="exodeoxyribonuclease VII large subunit; Reviewed; PRK00286" /note="gene_1509" /note="generic binding surface I" /note="generic binding surface II" /note="identified by MetaGeneAnnotator; putative" /product="exodeoxyribonuclease VII large subunit" /protein_id="GAK31422.1" /transl_table=11 /translation="MAEYLTVSTLTKYLKRKFTADPYLKEVYLTGEVSNYRQRPGHQY FSLKDDGAVISATMFKGVFDKLPFKLEAGMKVNVVGYVDLYGPNGSYSIIINRLNVDG VGALYQALEQLKAKLAQQGTFKVLERPIERFPKKIAVITSPSGAVIRDIMTTVQRRYP IAEIILYPAVVQGNGAVPSLLKQLDLLAERTDIDTLIIGRGGGSIEDLWAFNDETLAQ KLLTMPMPVISSVGHETDTTIADYIADKRAATPTAAAELATPIQLVDLWSGLQQLQGR LIQRIQLQIMQQRQRLNRVEQSYVLTQPARLYEGHMQRLDLVQQRLQRVMQAELQNYQ HRFAMVVPRLNQLIERYLERANERFSQAAKGLNLVSPLAILGRGYSLVSNKAGLVRSI DDVALDESIEIRTNDGILEAKVTRKEESNGEK" regulatory 123978..123983 /gene="xseB" /locus_tag="WOSG25_091220" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 123990..124208 /codon_start=1 /gene="xseB" /locus_tag="WOSG25_091220" /note="COG: COG1722; Pfam: PF02609; InterPro: IPR003761" /note="exodeoxyribonuclease VII [Weissella paramesenteroides ATCC 33313]" /note="exodeoxyribonuclease VII small subunit; Provisional" /note="gene_1510" /note="identified by MetaGeneAnnotator; putative" /product="exodeoxyribonuclease VII large subunit" /protein_id="GAK31423.1" /transl_table=11 /translation="MAKNSFEDDLTTLEQIVAQLEKGDVPLEEALTKFEQGVKLSKGL QKTLQDAEQSLAKIVNEDGTVTDFKVED" regulatory 124197..124202 /gene="ispA" /locus_tag="WOSG25_091230" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 124211..125071 /codon_start=1 /gene="ispA" /locus_tag="WOSG25_091230" /note="gene_1511" /note="identified by MetaGeneAnnotator; putative" /product="geranyltranstransferase" /protein_id="GAK31424.1" /transl_table=11 /translation="MRLAEYAKIVQPEIEQFLMTEFAKLDSNNQLIAAMDYALMTGGK RLRPLLTLAVAETFGQKRAMIIKNASAVELMHTYSLIHDDLPAMDNDTLRRGKPTVHL KFGEDVAILAGDALQPLAFEWVLAGEQISAESKLELSRLLAKAAGANGMVAGQILDME MTKATKTELATVRKLHNLKTGALIAYAVQAGGILAGVNQEIQQALWQFGLKYGLAFQI KDDIDDLIQDGDEDKQAYPTLLGLAGAQKALRKEVTDAQGLLKEIGEKAGVDIALLLS FLDYFDEMVK" regulatory 125060..125065 /gene="ftsJ" /locus_tag="WOSG25_091240" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 125072..125920 /codon_start=1 /gene="ftsJ" /locus_tag="WOSG25_091240" /note="COG: COG1189; Pfam: PF01479,PF01728; InterPro: IPR004538" /note="FtsJ-like methyltransferase; pfam01728" /note="Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]" /note="RNA binding surface [nucleotide binding]" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; cd00165" /note="gene_1512" /note="hemolysin A [Weissella paramesenteroides ATCC 33313]" /note="identified by MetaGeneAnnotator; putative" /product="cell division protein FtsJ" /protein_id="GAK31425.1" /transl_table=11 /translation="MAIEKERVDILAVQQGLFTSREQAKRAIMAGEILGENEQRMDKA GEKIPVTVELHLKGKPMPYVSRGGFKLEKMLQVFSIDMQDQVVLDIGSSTGGFTDVSL QNGAKLVYALDVGTNQLAWKLRSDERVVVMENTNFRYAKLADFTAGQPSRATIDVSFI SLNLILPALSGILAAGGSVATLIKPQFEAGREAVGKHGIVKDAKTHLAVIDKLVGYAI DNGFSIVGLDYSPIKGGSGNIEFIAHLKLDGGKTSIDEQTRKAVVDAAHQQLNARRTG DEDAAE" regulatory 125894..125899 /gene="argR" /locus_tag="WOSG25_091250" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 125907..126356 /codon_start=1 /gene="argR" /locus_tag="WOSG25_091250" /note="Arginine repressor, C-terminal domain; pfam02863" /note="Arginine repressor, DNA binding domain; pfam01316" /note="COG: COG1438; Pfam: PF01316,PF02863; InterPro: IPR001669" /note="arginine catabolic regulator [Weissella paramesenteroides ATCC 33313]" /note="arginine repressor; Provisional" /note="gene_1513" /note="identified by MetaGeneAnnotator; putative" /product="arginine catabolic regulator" /protein_id="GAK31426.1" /transl_table=11 /translation="MRRSKQARQQAIRTLVLTERIQKQEDLVKHLNAQGWEVTQATVS RDIAELQLVKVPDQNGGFIYAVMTDTDYLNQLGLILRETTTKVITQQNMVMIKVTPGT GPALKMALEEANLGDVFGLIGDDAGVLVILKENIDAEEFTKMLMMHH" CDS 126380..128068 /codon_start=1 /gene="recN" /locus_tag="WOSG25_091260" /note="ABC transporter signature motif" /note="ATP binding site [chemical binding]" /note="ATPase involved in DNA repair [DNA replication, recombination, and repair]; COG0497" /note="COG: COG0497; Pfam: PF02463; InterPro: IPR004604" /note="D-loop" /note="DNA repair and genetic recombination protein [Weissella paramesenteroides ATCC 33313]" /note="H-loop/switch region" /note="Q-loop/lid" /note="RecN ATPase involved in DNA repair; ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and...; cd03241" /note="Walker A/P-loop" /note="Walker B" /note="gene_1514" /note="identified by MetaGeneAnnotator; putative" /product="DNA repair and genetic recombination protein" /protein_id="GAK31427.1" /transl_table=11 /translation="MLQELSIQNFAIIPKLNVSFQPGMTVLTGETGAGKSIIIDAVGL LTGGRGSVDFIREGTSKALLQGLVDIEPETPIWGVLERYGVEAEDNQLLIHRELHRSG RNVIRVNGTLVNATALKEIGSHLVDIHGQNEHQELMNVERHIKLLDEFGQDKIANLLK EYQKNFYEYRELAATLKKRRNDEQAWAQRLDMLAFQSRELSEANLVADEESKLEREYQ ELTNFQDVLTALSRAYEALQGDWEGNGLETVSLSMNSLEEIEELSPKYQALAESVRGA YYELQDAASEILSTRDGLEFDGERLIEVEERLNLIHSLERKYGATVADVLAHQEAVDF ELAQMTGNKKTAAELADEVAIVRKRTLSLAQDLTLERQITAKRLSKEIHVQLADLYME KASFSSKITKRSQLNEFGQDDVEFYIQTNPGESAKPLVKIASGGELSRMMLAMKTIFS REQGVTSIIFDEVDTGVSGRVAQAIAEKIATVAQNSQVLTITHLPQVAAVADQHFYIQ KQVIGERTETTITKLTTDERVDELARMLSGDELTQAARNNARDLLKRAEQRIKH" regulatory 128265..128270 /locus_tag="WOSG25_091270" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 128275..129834 /codon_start=1 /locus_tag="WOSG25_091270" /note="gene_1515" /note="identified by MetaGeneAnnotator; putative" /product="patatin" /protein_id="GAK31428.1" /transl_table=11 /translation="MFVQEGYLENVDAVFQQLVGQFVDAQEARNRYSDLRGQKNIKGL VIVDKTVLVGAVLYTFDQEICEVMVTLTWPGYDRNIIMQALIDYLSKARVKQLRLYSN FTTDESWLKSCGFKHVDKGIYWRDFTYPIAFVFGGGGAHGAFLTGAYEALAAAHVVPT MLYGVSVGAITGMSLMHLDTTIANATWAELTTQMVYEVDHVSLNRRQFTRNLARNFIT HRYYNKASLRQVIQPAVEKELASPPLADFTLVATEFPSLKEAVYRVTKETTVTELTDW ILASSAFYPLVAPVKIGEKRYIDGGYSNNIPANLAATDGAKEIYAFSIMDNSIANLNV PDDVNLHYIRTPWELGPLLDFIPEMSQRHRRLGFLRTKQVLGEYAGYYYAFTEPVNFT WLGGPQLIRWLATDPITAPLAELLNEAPVWLVWTQWLERKAENKFDGDAKAMGLATIE RLAELLAVDPLKTYTLQGFIDEIIKQGTFRTNLPSAKGKISRPYLLANIALVLTGLLY LLSKSAKQGRI" regulatory 129855..129860 /locus_tag="WOSG25_091280" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 129870..130487 /codon_start=1 /locus_tag="WOSG25_091280" /note="COG: COG0194; Pfam: PF00625; InterPro: IPR008145" /note="G-X2-G-X-G-K" /note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine...; cd00071" /note="Guanylate kinase [Nucleotide transport and metabolism]; COG0194" /note="catalytic site [active]" /note="gene_1516" /note="guanylate kinase [Weissella paramesenteroides ATCC 33313]" /note="identified by MetaGeneAnnotator; putative" /product="guanylate kinase" /protein_id="GAK31429.1" /transl_table=11 /translation="MKRGVLIVLSGPSGVGKGTVRKALFEEPDIDFQYSISMTTRQPR AGEVNGEDYFFVTREEFETEISNGGMLEYAEYVGNYYGTPKSFIDRTLAAGRDVLLEI EVQGALQVKEKMPEGAYIFLTPPDLHALKQRLIGRGTEAMAVIEKRVSTATSEIRMMA NYDYAVVNDEVELAVRRIKDIINVERLRVHRVLPEYVEMIEELEE" regulatory 130470..130475 /gene="rpoZ" /locus_tag="WOSG25_091290" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 130484..130699 /codon_start=1 /gene="rpoZ" /locus_tag="WOSG25_091290" /note="DNA-directed RNA polymerase subunit omega; Reviewed; PRK00392" /note="DNA-directed RNA polymerase, omega subunit [Weissella paramesenteroides ATCC 33313]" /note="Pfam: PF01192; InterPro: IPR003716" /note="gene_1517" /note="identified by MetaGeneAnnotator; putative" /product="DNA-directed RNA polymerase omega subunit" /protein_id="GAK31430.1" /transl_table=11 /translation="MILYPSVDKLLERVDSRYKLIALGAKRAHKLEQGALPTLAKFES VKPIGQAFEEIEAGNVIIDPDNIDQDA" CDS complement(130852..131514) /codon_start=1 /gene="dedA" /locus_tag="WOSG25_091300" /note="COG: COG0586; Pfam: PF09335" /note="DedA family protein [Weissella paramesenteroides ATCC 33313]" /note="SNARE associated Golgi protein; cl00429" /note="Uncharacterized membrane-associated protein [Function unknown]; COG0586" /note="gene_1518" /note="identified by MetaGeneAnnotator; putative" /product="DedA family membrane protein" /protein_id="GAK31431.1" /transl_table=11 /translation="MAFVIDLFLHLDVHLNAFVNQYGTLSYAFLFLVIFIETGAVILP FLPGDSLLFAAGAISAIPGNALNHYVLMLMFWIAAFGGDNLNFFLGRTIGYRLVRHPL LGRFIKEKQLDEAKSFYERHGALAIIFARFLPIIRTLAPFTAAVSGFSYKKFASLAAI ATTIWVILGVEAGYYFGRIDFIQKHFTLVIVGILFVTALPAIIGGVRSHLISKKQKKM TK" regulatory complement(131526..131531) /gene="dedA" /locus_tag="WOSG25_091300" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" regulatory 131649..131654 /gene="ppiB" /locus_tag="WOSG25_091310" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 131661..132245 /codon_start=1 /gene="ppiB" /locus_tag="WOSG25_091310" /note="COG: COG0652; Pfam: PF00160; InterPro: IPR002130" /note="Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; pfam00160" /note="gene_1519" /note="identified by MetaGeneAnnotator; putative" /note="peptidyl-prolyl cis-trans isomerase B (rotamase B); Provisional" /note="peptidyl-prolyl cis-trans isomerase [Weissella paramesenteroides ATCC 33313]" /product="peptidyl-prolyl cis-trans isomerase B" /protein_id="GAK31432.1" /transl_table=11 /translation="MTFPQLDLENAVGPIATLETTKGTIKIKLFEEQAPKTVENFKGL IEKGYYDGIIFHRVINDFMVQGGDPTGTGMGGESIFGKKFADEFSNELFNLRGALSMA NAGPNTNGSQFFMVQAPRVANDMLRQLKGIYADEVVEAYAQNGGTPWLDRRHTVFGQI IEGMDVLDSIAKSKVDYADKPVEDIKIIKASIEA" regulatory 132368..132373 /locus_tag="WOSG25_091320" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 132379..132699 /codon_start=1 /locus_tag="WOSG25_091320" /note="gene_1520" /note="identified by MetaGeneAnnotator; putative" /product="universal stress protein" /protein_id="GAK31433.1" /transl_table=11 /translation="MQLDRDTQGLIHISECRSAFIQHVGDELMIGQTVTIVILDIDYY NQKISLSRRAVIDNELLAVDLDTSNLRNKYHHYWTNSHISIGFNTIAENKMQMVDEAL RRLR" regulatory 132699..132704 /locus_tag="WOSG25_091330" /note="identified by MetaGeneAnnotator; putative" /regulatory_class="ribosome_binding_site" CDS 132713..133087 /codon_start=1 /locus_tag="WOSG25_091330" /note="gene_1521" /note="identified by MetaGeneAnnotator; putative" /product="hypothetical protein" /protein_id="GAK31434.1" /transl_table=11 /translation="MSLVAGTVIFTRGDKSYFLVADTLAKPKFYTVKMHRHEADTALG SLLTGLKNELGLDPDNLRLGEIAGWHADDDEIVSLYTLDAVDPDAFNLKRLDLLGLHF VSAHEAAQLLLDVDMMVAVKLD" CONTIG join(BAWR01000011.1:1..133496) //