LOCUS D38016 2040 bp DNA linear PLN 12-JUN-2024 DEFINITION Beta vulgaris subsp. vulgaris mitochondrial nad9 gene, petG pseudogene, complete cds. ACCESSION D38016 D16539 VERSION D38016.1 KEYWORDS . SOURCE mitochondrion Beta vulgaris subsp. vulgaris ORGANISM Beta vulgaris subsp. vulgaris Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta. REFERENCE 1 (bases 1 to 2040) AUTHORS Mikami,T. TITLE Direct Submission JOURNAL Submitted (20-AUG-1994) Contact:Tetsuo Mikami Hokkaido University, Faculty of Agriculture; Kita 9 Nishi 9, Sapporo, Hokkaido 060, Japan REFERENCE 2 AUTHORS Kubo,T., Mikami,T. and Kinoshita,T. TITLE The sugar beet mitochondrial genome contains an ORF sharing sequence homology with the gene for the 30-kDa subunit of bovine mitochondrial complex I JOURNAL Mol. Gen. Genet. 241, 479-482 (1993) REFERENCE 3 AUTHORS Kubo,T., Yanai,Y., Kinoshita,T. and Mikami,T. TITLE The chloroplast trnP-trnW-petG gene cluster in the mitochondrial genomes of Beta vulgaris, B. trigyna and B. webbiana: evolutionary aspects JOURNAL Curr. Genet. 27, 285-289 (1995) COMMENT D16538:submitted (21-Jun-1993) to DDBJ by: Tetsuo Mikami FEATURES Location/Qualifiers source 1..2040 /clone="#449" /db_xref="taxon:3555" /mol_type="genomic DNA" /note="common name: sugar beet" /organelle="mitochondrion" /organism="Beta vulgaris subsp. vulgaris" /strain="TK81-O" /sub_species="vulgaris" /tissue_type="taproot" misc_feature 108..168 /citation=[2] /note="sequence homology to sugar beet coxII 5' flanking region" CDS 211..789 /citation=[2] /exception="RNA editing" /gene="nad9" /note="NADH dehydrogenase subunit 9" /protein_id="BAA07213.2" /translation="MDNQFIFKYSWETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCF LKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRLQTCADEVTRISLVV SLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDP EKRVVSEPIEMTQEFRYFDFASPWEQRNGNEG" misc_feature 302 /citation=[2] /experiment="experimental evidence, no additional details recorded" /note="C to U change on mRNA" /note="RNA editing" misc_feature 323 /citation=[2] /experiment="experimental evidence, no additional details recorded" /note="C to U change on mRNA" /note="RNA editing" misc_feature 509 /citation=[2] /experiment="experimental evidence, no additional details recorded" /note="C to U change on mRNA" /note="RNA editing" misc_feature 538 /citation=[2] /experiment="experimental evidence, no additional details recorded" /note="C to U change on mRNA" /note="RNA editing" misc_feature 578 /citation=[2] /experiment="experimental evidence, no additional details recorded" /note="C to U change on mRNA" /note="RNA editing" misc_feature 912..1607 /citation=[3] /note="sequence homology to chloroplast DNA" regulatory 930..937 /citation=[3] /function="putative promoter" /note="purine-rich motif" /regulatory_class="promoter" tRNA 1017..1090 /anticodon=(pos:1051..1053,aa:Pro,seq:tgg) /citation=[3] /gene="trnP-UGG" /note="sequence homology to chloroplast trnP gene" /product="Pro-tRNA" /pseudo tRNA 1264..1337 /anticodon=(pos:1298..1300,aa:Trp,seq:cca) /citation=[3] /gene="trnW-CCA" /note="sequence homology to chloroplast trnW gene" /product="Trp-tRNA" CDS complement(1451..1564) /citation=[3] /experiment="experimental evidence, no additional details recorded" /gene="petG" /note="cytochrome b6/f complex subunit 5" /note="sequence homology to chloroplast petG gene" /pseudo BASE COUNT 661 a 386 c 410 g 583 t ORIGIN 1 gaattctctc ctttctaact gagttccgca cccggatcta aactagtcct cgaggagaag 61 gtagccgaaa gagcgcttct ccgagagaca tagttcgaaa tagtgcatcc catgcctttc 121 ctggttggaa aacccaaccg gtgatttccg acaagtcttt cttcattttt gagcaagaag 181 cggaactaca agaaagcttt ctttctcttt atggataacc aattcatttt caaatatagt 241 tgggagactt tacccaagaa atgggtcaaa aaaatagaaa aatcagaaca tgggaataga 301 tctgatacca atacggacta cccatttcaa ttgttgtgct ttcttaaatt gcatacctat 361 acaaggtttc aagttttgat cgatatttgc ggagttgatt atccttctcg aaaacgaaga 421 tttgaagtgg tctataattt actgagtact cggtataatt cgcgcattcg gctacaaacc 481 tgtgcagacg aagtaacacg aatatctccg gtagtcagtc tatttccatc agctggccgg 541 tgggagcgag aagtttggga tatgtttggt gtttcttcca tcaatcatcc ggatctacgc 601 cgtatattaa cagattatgg tttcgagggt catccattac gaaaagactt tcctctgagt 661 ggatatgtag aagtacgcta tgatgatcca gagaaacgtg tggtttctga gcccattgag 721 atgacccaag aatttcgcta tttcgatttt gctagtcctt gggaacaacg taacggtaac 781 gaaggataat tcggaatcag aataagtcca gtccagggga caaatcaata ggaaatgcta 841 tttgcttcgt aagaagactt ctatgaaatg aaagagtttc acgggaattg tcttgatcgt 901 cggatatcat taaaaaaaaa agaaatggca agaataattt aatatcgata gagaaaaaaa 961 aacgatctgg aaaacaggga aagggttctc cacaatgaca ctgtagacta attgaaaagg 1021 atgtagcgca gcttggtagc gcctttgttt tgggtaaaga atgtcacggg ttccaatcct 1081 gtcatcccta cctattcttt cccctgggca gtaagggggg atcgattgag atcgattcaa 1141 ttggggcata gataatctgt tatttttatg atactatata tgatagtata tgtatgcagg 1201 gtgtagtatt gggttacaaa aggaatcctt ttctttacag tcttatctat tgtgataaga 1261 aaagcgctct tagttcagtt cggtagaatg tgggtctcca aaacccaatg tcgtaggttc 1321 aaatcctaca gagcgtgatt cccttcttgt taggtcgaat tagactgaaa aaaattcact 1381 aacttgaaca gtaatctaaa tttgacctct aatccacagg aggtcaatca aaaaaatctt 1441 ttttaattaa tcaaaggtcc aactgatcac cacgtctgta ttgtaaatat gcagttacga 1501 ataatccagc caaagtaata ggaattagac ctaagacgat tccaaataga aaaacttcaa 1561 tcatttcaat tcgtttgaaa aaaaaaaaaa gaaaactcta tccttaagct tcgcataagc 1621 gacttcatac gtgtaatttc attcaaaaat cgatattgaa ttagcgaaat ccctattcca 1681 ttgcttcagc ctaccagact tatgagatat cttttttttt taagagctta acgagtactt 1741 caatcgatga actccttgct gcatcgatgc tcgagaaagc aagagcggat gagtgccaac 1801 tacaactact aatgctaatt gaagctcctt tcctgacagc gttatggcat tcaggagttt 1861 catcagcaat ggtgagagtg gcctatacta gttgcgagat aaaagtcatt cttccaaaca 1921 gcggtaatcc cgcatctgaa cctattcttc tagcatacag ctaatacagt aagaaaggca 1981 ctaagacact aatgcagcaa taagactaaa gccagaaaga aagcaggaga tgaacaaaac //