LOCUS RATRPIII 4141 bp DNA linear ROD 16-FEB-2008 DEFINITION Rattus norvegicus gene for regeneRattus norvegicusing protein III (reg III), complete cds. ACCESSION D26078 VERSION D26078.1 KEYWORDS reg III; reg/PSP gene family; regenerating protein III; regeneration promoting protein. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 4141) AUTHORS Suzuki,Y. TITLE Direct Submission JOURNAL Submitted (04-DEC-1993) Contact:Yoshihisa Suzuki Tohoku University School of Medicine, Department of Biochemistry; 2-1 Seiryo-machi, Aoba-ku, Sendai, Miyagi 980, Japan REFERENCE 2 AUTHORS Suzuki,Y., Yonekura,H., Watanabe,T., Unno,M., Moriizumi,S., Miyashita,H. and Okamoto,H. TITLE Rat gene for regenerating protein III (reg III), complete cds. JOURNAL Unpublished REFERENCE 3 AUTHORS Suzuki,Y., Yonekura,H., Watanabe,T., Unno,M., Moriizumi,S., Miyashita,H. and Okamoto,H. TITLE Structure and expression of a novel rat RegIII gene JOURNAL Gene 144, 315-316 (1994) COMMENT FEATURES Location/Qualifiers source 1..4141 /db_xref="taxon:10116" /mol_type="genomic DNA" /note="Common name: Rat" /organism="Rattus norvegicus" /strain="Wistar" mRNA join(1152..1225,1530..1607,2337..2455,2652..2789, 3299..3425,3667..3945) /note="minor transcript" 5'UTR join(1152..1225,1530..1534) /note="minor transcript" exon 1152..1225 /experiment="experimental evidence, no additional details recorded" /note="minor start" /number=1 mRNA join(1203..1225,1530..1607,2337..2455,2652..2789, 3299..3425,3667..3945) /note="major transcript" 5'UTR join(1203..1225,1530..1534) /note="major transcript" exon 1203..1225 /experiment="experimental evidence, no additional details recorded" /note="major" /number=1 intron 1226..1529 /number=1 exon 1530..1607 /number=2 CDS join(1535..1607,2337..2455,2652..2789,3299..3425, 3667..3734) /codon_start=1 /product="regenerating protein III (reg III)" /protein_id="BAA05071.1" /translation="MLPRLSFNNVSWTLLYYLFIFQVRGEDSQKAVPSTRTSCPMGSK AYRSYCYTLVTTLKSWFQADLACQKRPSGHLVSILSGGEASFVSSLVTGRVNNNQDIW IGLHDPTMGQQPNGGGWEWSNSDVLNYLNWDGDPSSTVNRGNCGSLTATSEFLKWGDH HCDVELPFVCKFKQ" sig_peptide join(1535..1607,2337..2338) /note="putative" intron 1608..2336 /number=2 exon 2337..2455 /number=3 intron 2456..2651 /number=3 exon 2652..2789 /number=4 intron 2790..3298 /number=4 exon 3299..3425 /number=5 intron 3426..3666 /number=5 exon 3667..3945 /number=6 3'UTR 3735..3945 polyA_site 3945 BASE COUNT 1133 a 855 c 852 g 1301 t ORIGIN 1 actagtccat cagagctgct ccatttccct aattcatttc ctatgatcac atattcatag 61 ggacttcaag catcattcag aaattattct agatttattc ttttaaatat gcccatgcat 121 gtgtctatgt gaatgtttat cattgtttga gagtataaat gctcatttag attgaaagag 181 gacattatac cttctggggc tggatacaga tggttataaa gtacctgatt tggatgctag 241 gaaccaaacc agtcctctgg aagagcactt tgtgctatta actgttgacc catctctcca 301 gcctcctaat ttctatagta tatatgttaa atgttactag ctattcactg tgctgacatt 361 tatacacata gaggaaaagg aaagatggct aaacatgtaa ttgtttaatg ttaactgggt 421 tagtatcatc agcatgggta aattacatct atgcatttgc atttggcaaa agatagtttt 481 cttctttttt ttttattaac ttgagtattt cttatataca tttcgagtgt tattcccttt 541 cccggtttcc aggcaaacat ccccctaatc tctccccctc cccttcttta tgggtgttct 601 cctccccatc ctccccccat tgccgccctc cccgcaacaa tctagttcac tgggggttca 661 gcaaaagaca attttctaag tgctcttgta cttggtgact tcatggaatc tataactgaa 721 gtaaagacct gcttataagc atctcttttc acagtctgtg tggctgtgta ggaagtataa 781 aattgaaact cagtggttac aatgtctaag acaaaaatgt tgttcagttg ggttgtaact 841 catgattttc atgcatttaa aaaattaagc aaagaaactt cagtgattta tatataggaa 901 atatggtcag atgttccata gtgataatgc ttgtgaagta gaaaatagtt taaatgttgc 961 cattttacaa tcaattgcag aatttcaaac atcacctgca cctgtggata gagcatattt 1021 gctaacattt gtgtgttagt ttctgtcttt gccaggaagt ctcctgcaat ttttgctggg 1081 aagctctctg aatgtatgcc aagcactacc cattatcctg acttacataa gcattcactt 1141 attcactttg atgcccctcc ttcgaatcct atcataaaag cagtcagttt tgtcctgacg 1201 aacatcccag atcactgcaa ggcaggtaag tgggagtcga atgatgctga gagcctagca 1261 ggggatcatc cctcatacta tagagaaaag atacaagaga atctctgtcc taatggaaag 1321 taggactctg agaattagca aagtcttcct gggtgatttt ctgtgcaagg ggaaatatta 1381 gattctccat ttccttccag accttagcaa agcagagatg gggctaagac tagtgtatcc 1441 ctgaagacct aggcaaaggg agagagggcc ctcgtttgct tgttctcgtt gactacactc 1501 tctgtgccct gtttgctgct tccttgaaga caagatgctg cctcgtctgt ccttcaacaa 1561 tgtgtcctgg acgctgctct actacctgtt catatttcag gtacgaggta agtcttctct 1621 gactccggca ctgaattatc tgtgagtgtt aagagaaaag gagcaaagga gtgttcttag 1681 aagtctcatg tggtaattgg gaggggtctc tgcacaggaa tatcacctca tgcatctgct 1741 tgccttcttc catgctgctg gcagtgaaaa gtgtcagtgt tgcatcagca ctggagtgag 1801 agggtttcca ttttgtcagg aggctctcaa ttatgatagt atgtatgttg gagtagggaa 1861 gtatgagggc cactaatgag gcatacagct ggaccctgca gagaatacag tgtcacaggg 1921 gaatgtgtat aaagtataaa acgaaaaaaa gaagctcttc tacaccgaaa atcatttttt 1981 ttaaaaaaaa tatgaggcac ctagttaggt atagtggtag gtaccttgaa aactagcatt 2041 caggagggag atgcaggagg gtatctgtga gttcaaggcc aacttcttct gcatagtaaa 2101 ttacaggaca tccaaggcta cagagagaat ttgtcacaaa gagagcaaaa acaaacaaat 2161 aaaaaaaacc aaacaacagt atcatgagaa gggaagttta gtggggctgt cactgtcttg 2221 attgtagcca cccactgcac aaaacggcct ttgtaaacat tcccttgagt ttttctccct 2281 gtccagctcc cactctctat ctcatgccat ccatctcttt atctctctcc atccaggtga 2341 agactcccag aaggcagtgc cctctacacg aaccagctgc cccatgggct ccaaggctta 2401 tcgttcttac tgctatacct tggtcacgac actcaaatcc tggtttcaag cagatgtgag 2461 tgatgaaggg tggggctgaa gataccaaca taaagtgcaa attggtgaca ggagaagaga 2521 tttcctgttc ccatggctcc atggtggtgg ggtcagaata actgttcttt tttcatgtaa 2581 tctttctaca catctacccc accactagac aatggactct cagtctctct ctcattctct 2641 tccttaaata gctggcctgc cagaagagac cttcaggaca ccttgtgtct attcttagtg 2701 gaggtgaggc ttcctttgtg tcttccctgg tgacaggcag agtgaacaac aaccaagaca 2761 tctggattgg gctccatgat ccaacaatgg tgagattcta attatttcct gttttatctc 2821 caggagctaa tgtctcccaa gcacaatttt tcttgtctcc tgtctgtgta taatgtccta 2881 gcactcatag tgggtgacat tagggtaagg aacatcctca ataccagagt gaaaggctga 2941 gttctatgga ggttcctatt attcagctta atttattttc ctattttcaa cttttgcatt 3001 tttcttttat ttaagaaagt caattgatga cttcttttat cttcaagtaa ctttcacaaa 3061 aaattttgag atcattttaa attaagataa gatttatatt tatttattaa atattaggct 3121 tatttatttt gtatgtaagt tttctctaaa tgtatgtggg tgcattattc ttgttcttgt 3181 gattattggc aaggaggagt cttatgagat aaactttaag tcagaatttc taagggaaaa 3241 gtagcctggt gaaatggata aagttccatg aagctctctt catacctcta ctgtgcaggg 3301 tcaacaaccc aatggaggtg gatgggagtg gagtaactct gacgtactga attatctcaa 3361 ctgggatggg gatccttcct ctactgtcaa ccgtggtaac tgtggcagtc taacagctac 3421 ctcgggtaag aaatggaata aacaccattt ttgcccaata tattcagttc tctcctctac 3481 cacagagtct gaccttatga ttatactctg gaactaggga aagcagtatg gatttgtgtc 3541 tttctaacgt tccagtttct acctagagaa tgactgaagc tgaatgaaag gctctgagcc 3601 taggacacat tctaaggtgc cccaatgtga tagtcctaag agccaaggtg tctcctctct 3661 ctccagagtt tctgaagtgg ggagaccatc actgtgatgt ggaattacct tttgtctgca 3721 agttcaagca gtagacccgc agcatcctga gtttatcatg aaggtcaccg tgacaaggga 3781 tgtacatgac aaggctgtac ttgcttcaca gtcctgcatc agacttgctg ttatgatttt 3841 ccatcttcct tcatccgttt tcttcccccc atttcaggct ttttttggta tagttcctgc 3901 tttgcaatct tgaagataaa taatacataa aatcttttat tttttatctt gtgttttact 3961 ctcctgataa gacttggcca agggttggag agtggttggg aaagaaaact acacattcac 4021 gacagctcaa tgtcgacttc ctggtatgct agggagacta tgggctctag agtgctctct 4081 tctagatgac catactatcc tctcacatcc tccttgcttg gcaaacggag ggtaaaacta 4141 g //