LOCUS CM000634 157053 bp DNA linear CON 26-JUL-2016 DEFINITION Phaeodactylum tricornutum CCAP 1055/1 chromosome 32, whole genome shotgun sequence. ACCESSION CM000634 ABQD01000000 VERSION CM000634.1 DBLINK BioProject: PRJNA13152 BioSample: SAMN02953727 KEYWORDS WGS. SOURCE Phaeodactylum tricornutum CCAP 1055/1 ORGANISM Phaeodactylum tricornutum CCAP 1055/1 Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum. REFERENCE 1 (bases 1 to 157053) AUTHORS Bowler,C., Allen,A.E., Badger,J.H., Grimwood,J., Jabbari,K., Kuo,A., Maheswari,U., Martens,C., Maumus,F., Otillar,R.P., Rayko,E., Salamov,A., Vandepoele,K., Beszteri,B., Gruber,A., Heijde,M., Katinka,M., Mock,T., Valentin,K., Verret,F., Berges,J.A., Brownlee,C., Cadoret,J.P., Chiovitti,A., Choi,C.J., Coesel,S., De Martino,A., Detter,J.C., Durkin,C., Falciatore,A., Fournet,J., Haruta,M., Huysman,M.J., Jenkins,B.D., Jiroutova,K., Jorgensen,R.E., Joubert,Y., Kaplan,A., Kroger,N., Kroth,P.G., La Roche,J., Lindquist,E., Lommer,M., Martin-Jezequel,V., Lopez,P.J., Lucas,S., Mangogna,M., McGinnis,K., Medlin,L.K., Montsant,A., Oudot-Le Secq,M.P., Napoli,C., Obornik,M., Parker,M.S., Petit,J.L., Porcel,B.M., Poulsen,N., Robison,M., Rychlewski,L., Rynearson,T.A., Schmutz,J., Shapiro,H., Siaut,M., Stanley,M., Sussman,M.R., Taylor,A.R., Vardi,A., von Dassow,P., Vyverman,W., Willis,A., Wyrwicz,L.S., Rokhsar,D.S., Weissenbach,J., Armbrust,E.V., Green,B.R., Van de Peer,Y. and Grigoriev,I.V. TITLE The Phaeodactylum genome reveals the evolutionary history of diatom genomes JOURNAL Nature 456 (7219), 239-244 (2008) PUBMED 18923393 REFERENCE 2 (bases 1 to 157053) AUTHORS Grigoriev,I., Grimwood,J., Kuo,A., Otillar,R.P., Salamov,A., Detter,J.C., Lindquist,E., Shapiro,H., Lucas,S., Glavina del Rio,T., Pitluck,S., Rokhsar,D. and Bowler,C. CONSRTM Diatom Consortium TITLE Direct Submission JOURNAL Submitted (12-AUG-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov/phaeodactylum JGI Project ID: 3634397 Contacts: Chris Bowler (cbowler@biologie.ens.fr) Igor Grigoriev (ivgrigoriev@lbl.gov) The clone of P. tricornutum that was sequenced is CCAP1055/1 and is available from the Culture collection of Algae and Protozoa (http://www.ccap.ac.uk). This clone represents a monoclonal culture derived from a fusiform cell in May 2003 from strain CCCP632, which was originally isolated in 1956 off Blackpool (U.K.). It has been maintained in culture continuously in F/2 medium. Annotation was done by the JGI Annotation team and the Diatom Consortium. Chromosomes 3 and 11 are complete and present in GenBank records CP001142 and CP001141, respectively. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Annotated scaffolds were added in December 2008. FEATURES Location/Qualifiers source 1..157053 /organism="Phaeodactylum tricornutum CCAP 1055/1" /mol_type="genomic DNA" /strain="CCAP 1055/1" /db_xref="taxon:556484" /chromosome="32" /geo_loc_name="United Kingdom: Blackpool" gene <2342..>3801 /locus_tag="PHATRDRAFT_41583" mRNA join(<2342..2389,2551..>3801) /locus_tag="PHATRDRAFT_41583" /product="predicted protein" CDS join(2342..2389,2551..3801) /locus_tag="PHATRDRAFT_41583" /codon_start=1 /product="predicted protein" /protein_id="EEC42912.1" /db_xref="InterPro:IPR008775" /translation="MALMLRKNLNVRTGLTSQSNTPIVEIEQPAMLEQLENSTVYNPA VEGSKDSAQIERESASFDADEDHLTAETGLSDEALQLLLQFQSLGCRFADDINDGTKD IITSKTVCVSYTARDSQVIAETYRRLQEKAENAAQDYASQLESRVIQDLQGFDCINSC APQRLKEDMFGALQRDGVVRLNHVLDADSCERCLESINRSLEEVDSSDTIGFGNVFSR KCRYDMYLRPQGVYREALQTLLSSKHSALGALLDRCLSVSNQGEAHIGQNVPCNFGRF HELSTLIADPGAAPQPIHPDAGYAPHAPMWTCFVALQDISPEMGPTVFLPGTHTETSH ALLKDPARKDAFLSGCTYKQGLLRAGDVAVMDARTLHFGNANESKHRRTLFYFTIRNP AHGSDPSDFPPCGSLFEDVEGLTIESLRNENGGKLLLDKQ" gene complement(<4298..>5092) /locus_tag="PHATRDRAFT_41584" mRNA complement(join(<4298..4954,4985..>5092)) /locus_tag="PHATRDRAFT_41584" /product="predicted protein" CDS complement(join(4298..4954,4985..5092)) /locus_tag="PHATRDRAFT_41584" /codon_start=1 /product="predicted protein" /protein_id="EEC42936.1" /translation="MQGGFSMVLLFQWSFILGGVLNMAQSIWEALAARTKALAPLVYH FNGLADLQWAQQIREREKSKKKMVKEWNSYQSMSTDSNVSTTASASQLSTLVWHQHLH KYTAHRRSILAAATFYIAALLALSQFSYHQANTSGRARSTLALTITLFSTTGRSTYPR LRVTSEQTENKSHHVLRVWANPEVLEDLCDLSFLIGSLMDSMLDDVRVSAHFDTWAIV SSLLWLIDACLYLQSNFVMASRVKKSHDIKSDSCFV" gene <6252..8778 /locus_tag="PHATRDRAFT_50590" mRNA join(<6252..6719,7041..8778) /locus_tag="PHATRDRAFT_50590" /product="predicted protein" CDS join(6252..6719,7041..8585) /locus_tag="PHATRDRAFT_50590" /codon_start=1 /product="predicted protein" /protein_id="EEC42913.1" /translation="MFEVVLGSGPWIEAWRNQSARTLELLDLPSCDALSVAFREASTD SYQAIQSVYVFLYLALRPMLLLFHYAAKTIFLFLYKHIIVQGLYRNGLSQAREWSVRL FYFQRSLTRKQVLGEASFMVLFVGLYKLRRHVQDKQYYQRILVWYDRRKLQIVKSYES GVDRIATVSLVLAAMTPHMVFLTCCAGIKLLFPSLITVVACNSPLSGLLSRWIPWIAT VTVIHDRFTNPLEKDSVGYTGEGKENSRKTEAISPPSSSKTAQDKQRPRHPLTPKTSG FFPRTPPSNKKRPRSRRSSVGSPLQRILRRNSEPLDEEEIYWIQYWSVHATLQLSKAI ASFVPVLVSLGRYTWITAGLQQLELAFYVWIYILPWIIPETVGGMSLAEARPLPLLAK LVGPFFSTTHEQISSVVTTDFWQAQIVSRLEGILKVFVFLQLLSKDSAGSLVLCLQEG RSLLVPGLTLFMPGFITSFGVAYVQFVLPLSRTARGSTIPTTSQLQYWVLHVLLSSLF CNLASILWWIPFSSHAIFVAWAYISIPQKTVSCYESVREELQSFGILEGGDKPSIEQT RTAKVVRWVIHSLPAAAEVDGGGISSIDNTAQSESGSADISLLDRPHEDPPTPESPFS ARGVSRDDEGYVEGDDCTLETARQFRRRNTTRLCRARDTTKNSKAA" gene <11739..>12257 /locus_tag="PHATRDRAFT_17109" mRNA <11739..>12257 /locus_tag="PHATRDRAFT_17109" /product="predicted protein" CDS <11739..12257 /locus_tag="PHATRDRAFT_17109" /note="GO_function: GO:16773 - phosphotransferase activity, alcohol group as acceptor" /codon_start=1 /product="predicted protein" /protein_id="EEC42914.1" /db_xref="InterPro:IPR000403" /translation="NFMQSLAGYALVSYLLGLKDRHNGNIMIDTRGHLIFIDFGFALG MAPGHEFSMERAPFKLTREYIDVMGGVGSECYKEFQRLFVSGFEECRRNSQIALGLVE IMMFKSNYPCFTGGRYGNGKALTKLEKRLMLRVPDKKVKKKALNLIRRSKQHFGTYLY DVFQHATNGYAL" gene 13339..15253 /locus_tag="PHATRDRAFT_50592" mRNA join(13339..13787,13871..14352,14424..15253) /locus_tag="PHATRDRAFT_50592" /product="predicted protein" CDS join(13438..13787,13871..14352,14424..15166) /locus_tag="PHATRDRAFT_50592" /codon_start=1 /product="predicted protein" /protein_id="EEC42915.1" /translation="MRIGSVFALVLYLLRTQIGASDLVYLVEPLLKWQRTLPGGGSIN GAYIAPNRNNLFVISSVCTVQALDPRTGESVWTYQPGNPSTCSGGVTFSDGVGTPYLT FIESTINLGPTPFSTQVVILDLNSGVLLAKSAFLSGQGAGEPQTTEDGRYIVATSNTA NIGTFVVIDTNAVENGIAPIVFEESNPSGPFSPVGFYHRPTTPIFFGGNTNDVFVWAF DLTQMQLVGTEAIENGQIFSFQFPSNYANNGGGLSVKTLGPKTSWKASTRPLLSNGGK SMHWANSDGRYRVWINRTVDDSPTTVLSLPRGIPTSVSAHAAPVLGQDETNPFVYLLG PNPSVFRSNTNLTTSVGLGVDSLFTGQILLSPKEEYMYIATEGRPETSRGILYQIKNE ENSLTVDWLFRAESPMSGDLARSTDGTTIFFGQRDGTVSALEVAEAEEELPSSTPASA PVFAPAVCREIGAICGSTTTERPCCFPWLCDAGVCRVPSSRTDPKTALKSDLTTAGSI GILRPRGTIRRDPLRN" gene complement(<15331..>16655) /locus_tag="PHATRDRAFT_50593" mRNA complement(join(<15331..16562,16616..>16655)) /locus_tag="PHATRDRAFT_50593" /product="predicted protein" CDS complement(join(15331..16562,16616..16655)) /locus_tag="PHATRDRAFT_50593" /codon_start=1 /product="predicted protein" /protein_id="EEC42937.1" /translation="MVKAHWRPGTSAPNPTRFGIPDYVGRSCQFRNLYFRPFDCTFHY YASPLQSRLVGENTTALLKQITTSKGYVPRSLYNKPKRRHEFVFAESRNASFTPKLHL FDSNSSEIDHSNVVSVAALRNQKMPVFLLYKLSYVFNFGHFVFDDLLSLFSLLDIFGY ASDEVGNPSLSTNYQHIPVTFPNEEHDFFYRCNHHSRWKECVEMYKRVAPLMGVQPVQ EQNDDILSMKHLFRQSHHENPRIFVQLPVVLVGTGDLAYFGCTGPCGAQRVSRIYCMR AWVFSNLFGPELGNQYSRQSAIPGRILVALPFGNSHVGIESFDTMIPAIQHAFGRSSV HVVNMASLSLKDQILEASQAHVYLSNNGGGSASSLFCARDSTVILFYQINGQKRDEEL YSNQGYLNVKYLKAGTSSNYVIEQILYALSQ" gene 17331..17971 /locus_tag="PHATRDRAFT_50594" mRNA 17331..17971 /locus_tag="PHATRDRAFT_50594" /product="predicted protein" CDS 17385..17894 /locus_tag="PHATRDRAFT_50594" /codon_start=1 /product="predicted protein" /protein_id="EEC42916.1" /translation="MAFGSVLNSALVLVLAVAVLAQIALAQDVEGLPSATPSQSPASA ITVSALPSTAPTIERSAAPTSMPSSSPFGSPAVCSRAGETCSGAGALPCCFPALCDRA SSVCVKTTAADSAAFKDGLRRDLLCGRSVSPSDCSPFDRVRGGIVTPSTLRGGRGDGR RVLLKGSSE" gene 18444..20749 /gene="helicase_5" /locus_tag="PHATRDRAFT_51301" mRNA join(18444..18578,18754..19000,19154..20749) /gene="helicase_5" /locus_tag="PHATRDRAFT_51301" /product="predicted protein" CDS join(18534..18578,18754..19000,19154..20148) /gene="helicase_5" /locus_tag="PHATRDRAFT_51301" /note="ATP-dependent helicase. Highly closed to the Thalassiosira protein thaps1 158962; GO_function: GO:3676; helicase activity - nucleic acid binding [Evidence 5524] [PMID 4386]" /codon_start=1 /product="predicted protein" /protein_id="EEC42917.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /translation="MADNDDDLVDYDEEEVVPEVAKDAAAVGGDGKESKKGHYVGIHA SGFKDFLLKPELLRAIVDAGFEHPSEVQHESIPQAVLGGDIVCQAKSGMGKTAVFVLA TLHQLNPSAESEDVQVLVLCHTRELAFQIAHEYERFSKYLPSIKTAVFYGGVNVTQNR DILKKEHPHIVVGTPGRILKLARDKDLKLSSLKHFVLDECDRVLESLDMRRDVQEIFR MTPHEKQVLLFSATLSKEIRPVCKKFCQDPMEIYVDDETKLTLHGLQLYYAKLAEAEK NKKLNDLLDALEFNQVVIFVSKVARAKELNRLLTECNFPSICIHAGMRQEERISKYKS FKDFNARILVATDLFGRGIDIERVNVVINYDFPDDSDQFLHRVGRAGRFGTKGIAISF ISSEADQTILSQIQSRFEVNIPTLPDEIDMSTYMST" gene 24937..26368 /locus_tag="PHATRDRAFT_50597" mRNA 24937..26368 /locus_tag="PHATRDRAFT_50597" /product="predicted protein" CDS 25001..26257 /locus_tag="PHATRDRAFT_50597" /codon_start=1 /product="predicted protein" /protein_id="EEC42918.1" /translation="MNLALFLFLCCAILAMRGFVFCDASSVSLPGEDSPRLVNYSMEF VEVINENNKMNVKFENSPGDGSLEGRFEIFVPDQSQSTRTISDINKSCYSDGGKLYIG PGISIFESSIGESQSTFSFAFDKNVNEKLPFYYRVSSDKAKFQVCVKFTMSKIVNDRK TDILFREVAISVDVHLDGLIVSSQPRGESSAQATAQMAQSKTVSVEPIPIQASVCDGY SDATIAGDVVPLCLYSTNPDSRILSVLDVEIFNDNQTQIFAQDGSTSARREALNSSLA ITTSKVHSKSYALCPEGPCVHLDFDVLRFFPSPYGSTFLLIGIVIFSVERGSRSAGAL VPQESHSNLLRQGAIREDKSDLLNRKVYQYFETSFDIPSLAVLGARNSKTSASFTSDT SAAVRVGANLLSLVLTVVAGLAIFMV" gene complement(<27089..>27595) /locus_tag="PHATRDRAFT_41593" mRNA complement(join(<27089..27220,27317..>27595)) /locus_tag="PHATRDRAFT_41593" /product="predicted protein" CDS complement(join(27089..27220,27317..27595)) /locus_tag="PHATRDRAFT_41593" /codon_start=1 /product="predicted protein" /protein_id="EEC42938.1" /translation="MVCIVTLTAVALATVSAFSRTTTSKTCGPERSRNGLFPPIPIGG QHFRGKTNERGRRLALGTDSDLAPAMYNFSGDRHNVVRSPAIAPLYKCEHQDQGQVQD KDDNDGTNKTPPPSKTESNGSSPSDRDSVTRKQQ" gene 31411..>34514 /locus_tag="PHATRDRAFT_50598" mRNA 31411..>34514 /locus_tag="PHATRDRAFT_50598" /product="predicted protein" CDS 31488..34514 /locus_tag="PHATRDRAFT_50598" /note="GO_function: GO:4222 - metalloendopeptidase activity; GO_process: GO:6508 - proteolysis and peptidolysis" /codon_start=1 /product="predicted protein" /protein_id="EEC42919.1" /db_xref="InterPro:IPR001431" /db_xref="InterPro:IPR007863" /translation="MSDSPSTRNADDLEVPLVDDRSYRYWTLPATSTADVVTTDRPGL RVLLVHDDSVDKGAAAVDVAVGQFQDGDLPGLAHLTEHMLFLGTQRFPQENALDSFLA AHGGHSNAYTDLEHTVYYMDVQAAQLEPALDRFGSCFEAPLLLENCVARELQAVDSEH GKNKQSDFWRYHQLTKTLLGQHNSHVYQQFGTGNLESLQPQGTAVLRQAVHDFYQRYY HTARMTLCVLGNQDLDVLQGWVEKYFGSLPSQPSDTLVEPPVPPLTPVLPQRVHVVPT RETNVLELQWCLREIQSLYRSKPTRILSHLLGHEGPGSLLAVLRERLWVQELYADDSS KTTSAFSIFCVQLELTVLGWEHVNDVVATVYRYIGLLQNEIPAWVADELQTTASTQFR FLSKSSPSDTVSRVAHQMQEFAIAHVLSGPYLVYEHDMAAVQSCLASLHVDNMLVLVA SKEYTGQTTATDPWYGTQYATVALEPDALEAWRQARSAATDGSGVDFIGLHLPDRNDM LATDFELKTSPYAVFAKTNTNDSNGDNGNVPPPPRCLLDTDTCRLWYKPDTEFRMPKV NIMCVLRSATAYESVTQSVLASLWSETADELCNVFSYAASMAGLHCNFSNTRNGMELH LSGYHDKAHVLLQRIVDTVRDFRVTPDLFERIQSKLEQQFQEFLVAQPYQHAIYAGDL CLETPKWDIHDRLQCLASLTLNDLQHFGRHILARFQLEMLVHGNVTASEAVQLSDIVL LGWRPQAPLNQIDVRVVQLPAQGSEGTSTVHRFSGWNEDDENSSVCNIYQVGTMDTKM NATLGLLHHLIREPAFGQLRTQEQLGYIVHTQVKTSGDKVKSLLFLIQSDSFDPIHMD QRIEAFLVDFRHKLVQMSEPDFAANVGALCQSFLEKNKNLSEESSRYWHVITNQTYRF YRMSELAAAAQTVTKLDVLRFLDRHVLATSPYRRKLSVQVFGQNHIADLLDKTDVAGD GIVLVESANDFRRSQALFPMQASASIEDWRLDAKDD" gene <37100..>38534 /locus_tag="PHATRDRAFT_1758" mRNA join(<37100..37210,37259..37693,37874..38200, 38286..>38534) /locus_tag="PHATRDRAFT_1758" /product="predicted protein" CDS join(<37100..37210,37259..37693,37874..38200, 38286..>38534) /locus_tag="PHATRDRAFT_1758" /note="GO_function: GO:4672; ATP binding - protein kinase activity [PMID 5524]; GO_process: GO:6468 - protein amino acid phosphorylation" /codon_start=1 /product="predicted protein" /protein_id="EEC42920.1" /db_xref="InterPro:IPR000719" /translation="LTVPSEAVANDGVDNVEGNLIIFENDTISVPHQNIHVIQRLLGQ GTFAQVFGCLHVQSGRSVAVKIVKNKPAYTRQATVEIDVFRALQEDMTTEGAQGSEYI LRLLCFFMYRSHLCLVFEMLGLNLYEVLKRRQFRGLPLSLVHQIVKQSVEGIKEFSRK NIVHCDLKPENVLLISNEVVESIKLIDFGSACFEGYPSHTYIQSRFYRSPEVLVGLPY DSAIDMWSLGCVAAELFLGLPILPGVHEHDQLGRIEEMISRVPAWMLEQGAKTSKFFI KSPASGFSSLHFKRNYIASLSRDDIQKQGGIEKLEKKPGNKYFKRKRLSDILTLHGQN TQKEDQDLLPAFVHFLYGLLDPDPWKRTTAFQALHHPFLT" gene complement(42590..>43796) /locus_tag="PHATRDRAFT_24238" mRNA complement(join(42590..43433,43583..>43796)) /locus_tag="PHATRDRAFT_24238" /product="carbamate kinase" CDS complement(join(42637..43433,43583..43796)) /locus_tag="PHATRDRAFT_24238" /note="This entry includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK); GO_function: GO:8804 - carbamate kinase activity; GO_process: GO:6525; amino acid biosynthesis - arginine metabolism [PMID 8652]" /codon_start=1 /product="carbamate kinase" /protein_id="EEC42939.1" /db_xref="InterPro:IPR001048" /translation="MLADRLIVAVGGNALQRRGERLTIENMLKASADMAPTIAALAKE HEVVLVHGNGPQVGELALERSAATFDVLGAESTGQIGYVLAQALSSVGCTAVPIVTQV VVDPQSEAFRNPTKFVGPVYGPKEAHALAESLGWIVKPDGEYFRRVVPSPPPMEILQV EAVRTLLEHSPDVLPIACGGGGVPVSRVPSRPETLQGVEAVIDKDACASKLALELEAD GLIILTDGGGIWKNFGKVDAQEMAQVTPEYLLGSKAGKKFPGSMGPKIEAAVNFVENS KNRQTAYAIIGDLKDAAKMLSNEEGTIIKDDVPSRVVWRERHEEGTPKPPKLTRDPPK YG" gene <44608..49229 /locus_tag="PHATRDRAFT_50602" mRNA join(<44608..44664,44684..44858,45014..45057,45332..46813, 46843..48525,48601..49229) /locus_tag="PHATRDRAFT_50602" /product="predicted protein" CDS join(44608..44664,44684..44858,45014..45057,45332..46813, 46843..48525,48601..48927) /locus_tag="PHATRDRAFT_50602" /codon_start=1 /product="predicted protein" /protein_id="EEC42921.1" /translation="MNLRAFLWKARLFVLSFFNSLFIPVAFLYLGINVQLLYSPGKAI ELTREHFWGGQPNDSPVVCFAGAARKSLDPQHDPRLFWSTFGKISEEPSLLLLTQRSN AMSSAEQKLSSDSFSVSNLSQLTEEVDSLDGSYETSRFLRKMPSQSRSYPASFSNNQR HSRLPFSTIGLYGRDSHKETLQARFRDQALSVEGGSTCLVTLAGPAGAGKSALASQME PFCADYGGFFVSGKFDAHRVGETDQDPYAAIRVACNQLAEKILRCDQDLLSERCDTDS QPLSRTSSTVVQPSTHSSKSISQQEEQIAARNFSFTDIQSKLQQELGDEDLTLLLRVV PVLAEVLGLNRSTIVALDRPWDQGTVEATDVQAQKHRLYSSFRHFFRTVGSFGTVLLV LDDVQWADAASLELIEFLVATEGPTREMRQSTRLMLIVSYRDNEVDEDHRFAQMMDRL KKRDLDDVNKNGKAVSHIEEISVDNLSVAEVTEFLADLMWIEEHRVRPLAELVHGKTL GNAFYLIQFLTSLVDEDILQAAPGSRSWSWDMERAAMHIDATANVVDLMRVKLNKMPR DTRSILKLLSCLGSTFALSIEPNSFDLGESAPREAPSTGRKALECLEHCVMEGWIVRL RRNLYLWVHDKIQEAVLSLIEPAYLPTLQRRIGELLLDKLSDSELEGNAFVVANLLNA GIQGMALSAARRIQTAKTNLAAAKRAIASASLSSAVRYLERGIMVVPEDHWSTHYKFS LDLFSTAAEAEYCIGNFNRVQRYSGQILAQTQRPLLDHRRAYNALMDAIGSQDQHLEA ANLCLEVLEKLGCPFPKRGVGLKIAFGFLKAKVSVKTISSELVSKMPVMTKDLELWVM SLLDKLFTFLYLAGSEMLPLSVLKSLQWTRKKGVSEFSPSAFARLGMSFTAFLGDPQT GKEFAEHALSLLNKVKSGKAESRTLMLVHSFVMPWSCPLKKTLEPLFRAYETGMATGF SENPMWCIYFMKEHSIHLGIPISKVLADFPSLISCMDKFQQLRQRDCCKIVGQALLNL SGQGKTPYVLTGELMNQDLMWNAAMDANDVVAIASLQRWRLYVAFYFEEYQIMMQLLE DTNLGSTIEKAQPGLYGLCPMIFHNGLACISMMRETGNNKYTVWARRFANTIKKWVDK GNPNVKHYDALLNAELAALFGKHSLAMRFFGSAILFSGSGGFKNDQALVYERFGEYNL KQGNVNEAKYGLEQAIQLYEAWGAHGKVNLIKQKHILLLAPPVEINVSIDE" gene complement(<49730..>50980) /locus_tag="PHATRDRAFT_41599" mRNA complement(<49730..>50980) /locus_tag="PHATRDRAFT_41599" /product="predicted protein" CDS complement(49730..50980) /locus_tag="PHATRDRAFT_41599" /codon_start=1 /product="predicted protein" /protein_id="EEC42940.1" /translation="MINNALFRGGLAALLFFSCTTTILRNRETDASRENAASLHKYQD TQEHTFAVPATKVTAITPKADQFEAVRRLGSSSKGKGGDSGKSGKGSSVSSKGKGGDS GKSGKGSDSGKSGKGSDSGKSGKGSDSGKSGKGSSVSSKGKGSDSGKSGKGSNSGKSG KGSDSGKSGKGSDSGKSGKGSESGKSGKGSDSGKSGKGSSVSSKGKGSDSGKSGKGSN SGKSGKGSDSGKSGKGSDSGKSGKGSDSGKSGKGSDSGKSGKGSSVSSKGKGSDSGKS GKGSNSGKSGKGSDSGKSGKGSDSGKSGKGSDSGKSGKGSDSGKSGKGSDSGKSGKGS DSGKSGKGSDSGKSGKGSDHGKGKGKGKGLDASSKGKGSGNGEAGKGKGKGKGLDASS KGKGSNKSPNGKGKGKGKGKGKGI" gene 52024..>52883 /locus_tag="PHATRDRAFT_31364" mRNA join(52024..52466,52554..>52883) /locus_tag="PHATRDRAFT_31364" /product="predicted protein" CDS join(52068..52466,52554..>52883) /locus_tag="PHATRDRAFT_31364" /codon_start=1 /product="predicted protein" /protein_id="EEC42922.1" /translation="MSLTSDLAATSNNKGIAARSVKTLHVAPMIRVSTPEFRAFVRIL TKKATLWTEMVVDETLWYHRNDPGALQTYLGSLKRTDSNDHEISAQQRNPIVCQLGGI TPKHTAKATQIITAFGYDEINLNMDCPSARVSPQPRRRRQFGAILMKETDRAVELVKT IWENTHLPVSVKCRVGVDNEDSWEFLEAIVRSLRPYCQRFYIHARKCLLQGLSPAQNR IVPPLNYPCVYRLCESFPDCEFYLN" gene <54991..>55884 /locus_tag="PHATRDRAFT_41601" mRNA <54991..>55884 /locus_tag="PHATRDRAFT_41601" /product="predicted protein" CDS 54991..55884 /locus_tag="PHATRDRAFT_41601" /note="GO_function: GO:3677 - DNA binding; GO_process: GO:6355 - regulation of transcription, DNA-dependent" /codon_start=1 /product="predicted protein" /protein_id="EEC42923.1" /db_xref="InterPro:IPR002059" /translation="MTRLVASVLSLRTIARTFPDVAHRLAHRAIGSKTGKVKFYLRDK GYGFITADGAGDGDIFLHRTAFVTHVPPEHLRHPFAREHERVSFDTQVDASSGQTRAV NVTWINGEPIPPLRQNFLGTAWERVHRDLGEAVYRILSNKVSENALSEAEQNEKIRDA YAFQQTKIDEAHQLIVNLGMDVADFPVYRSENNGRVLFKHVRDEDVITPDRVILEGAT EEKEPNIVPDQVSFGDAADSDEPGNNVADQVSFGDAADSDEPDNNVADQVSSGDAADN DEPGNNVADAVENETGDVEVK" gene complement(55941..59915) /locus_tag="PHATRDRAFT_50604" mRNA complement(join(55941..56232,56305..56484,57289..57609, 58645..59915)) /locus_tag="PHATRDRAFT_50604" /product="predicted protein" CDS complement(join(56176..56232,56305..56484,57289..57609, 58645..59751)) /locus_tag="PHATRDRAFT_50604" /codon_start=1 /product="predicted protein" /protein_id="EEC42941.1" /translation="MRLFLPTAAALLLASPTMFSGAQAQGSSSITGPELASRKRRANS DSKSNASSEEKRGLDLIRSYNEELLRYLQLTTADENSLVPTPGPTLAGAEVPTEAPLV PSECIVDVDITCTLGGSGLPCESLTAPPLGICVPADGSDLSIVTFEFQSTPCAGGDND QGTDAVCSDVGPGVPPSGADVSIVCEDNAEMSAIVLTVTPSSGITAGDTFTVEEMNGG PLPLSMVCTISDTGSGAVLQTNTFDLSGDVSLDLKDSFGSLILVSCNDVTCIEELNFV YNLSNVGPDSMTFLDLFRDFNGVAENLVSQVTPNPLLPGQSTSVSEEFTIDVCTPGLF RISIAVEAEPANGPVCLADDVIEFSINERPTTPTTPCSDLVASSGGICEVVLDFVYTF ENVGPNAFTVTAIFRKFNTVTNDIVDQLTPNPLAAGVMTTISESFTIDVCIPNRVYRV TLDAEAEPENGPFCQDNDIYEFIIGNGSTPTSKGGVPTSKGSVPTPSAKTGVPTSKGD VPTSGIDVTEKSGMPNPKSGMPNPKSGENSVGSGTRRRGRLLRDLQ" gene complement(<61433..63024) /locus_tag="PHATRDRAFT_50605" mRNA complement(<61433..63024) /locus_tag="PHATRDRAFT_50605" /product="predicted protein" CDS complement(61433..62797) /locus_tag="PHATRDRAFT_50605" /codon_start=1 /product="predicted protein" /protein_id="EEC42942.1" /translation="MHRVKIVIIGSLLIVLATLISSSTKIHKIESLRKKSSLTMFHGT VAVDSCIRLTAEGNDCNASAAEDTRPLTQLLKSDRLSIELHARETNASNTDYPRTIAA KLATNESSSPGFRLFSDEYVDKPDRTCRDFPAGNFTRRRNRPSGSASPPVSLHRLVKG EGWSTANDTSKAAVCRYTLSTLHFPHFMQQIVRCWSFWQRRLPQPSVLLVPSTLDSMK RRQENFLQGMLEALTNALNVSIVSNHTDPSVEIADGVAAYAFARLEDAVVLRNAVISY FAPQAAALLQKEKDEKDTGARPLRIGILNRRGGRRILNEKDLQGVLQRHTDVTVADFE KASFADQVSFYAMQDIVISSHGAQVTGVLFMPTCAGLLELFPQGYCLPQFFGSLALYS GLEYGYIYLSDGKSDHETKEAKRTLKGRIHARKLDLCPPVGKVVDAVEQLIEARRQCL RQTI" gene complement(<64566..>65303) /locus_tag="PHATRDRAFT_41604" mRNA complement(<64566..>65303) /locus_tag="PHATRDRAFT_41604" /product="predicted protein" CDS complement(64566..65303) /locus_tag="PHATRDRAFT_41604" /codon_start=1 /product="predicted protein" /protein_id="EEC42943.1" /translation="MKLILLCLLAAIALETTVAKDFSSFVHVRSSKRKRNESLSNNES RGTPLEAPKPNLWVDLWDAENELQRILQEASMTSMSFMSISPTPPSPSPPTPEIETTP APMDPSPVAEPTMAPMDPSPVTAPTLPMPTPLSDEPSLVPSEPVDGVPTSMPLDEIET SAPVAPLPTTEVPTSAPAAEIETSPPSEVTPQPVASPTTDLPTGVPMALIETQPPTDI TSDVPSDIPSEIPLTDSTELPTSQPVV" gene 66760..69400 /locus_tag="PHATRDRAFT_31367" mRNA join(66760..67092,67135..68191,68252..69400) /locus_tag="PHATRDRAFT_31367" /product="predicted protein" CDS join(66809..67092,67135..68191,68252..69370) /locus_tag="PHATRDRAFT_31367" /note="GO_function: GO:15036; oxidoreductase activity - disulfide oxidoreductase activity [PMID 16491]; GO_process: GO:6118 - electron transport" /codon_start=1 /product="predicted protein" /protein_id="EEC42924.1" /db_xref="InterPro:IPR001155" /db_xref="InterPro:IPR001327" /translation="MSSWLLCKGGVPSPKQLAGRTLRITGRCASNVPSSTEATSPTSS SSRTSTTADLRYPNLFRSLDLGPDIGVLPNRVLMGSMHTGLEGHSLPSWIADHHSLSR MATYFATRARGHVGLMVTGGIAPSRAGWTGPFSSQLLHEREVARHRVVTDAVHAVPVP LHHANSTTTVPARICLQILHTGRYAYHPFAVSASNTKSPISMFRARALTKAGVQQTVR DFVHTAVLAKQAGYDGVEVMGSEGYLLSQFLSPRTNQRTDDYGNASLANRARLALEIV QQTRAAVGNDFIIIFRLSLLDLVQDGLAFEESLQLATWLQDAGCTILNTGIGWHEARV PTISTTVPRAAFAFPTHALKAAKVVDIPIVATNRINHPQTAEDLLLNDTADLVSMARP FLADPYLLRKAYQNRPDEINTCIGCNQACLDHVFVGKTASCLVNPRACHETELPSIDR TTVRLPSAQRLRIGVVGAGPAGCAFSLAAAQRGHDVTLYDQQDSVGGQFHMAKKVPGK EEFHETLRYFRTMLEKEGVRVQLDTTVSFQDMERDDRDYSVDKWVIATGVTPRDPKIP GQDHSNVLSYIDVLKHRKPVGKRVAIIGAGGIGFDVAEYLLHHGDGDKDLLADEVSKE DFWRTWGIDTTLQTRGGLVVDSASRADIISTGAPKRELFLLQRKKGKLGKNLGKTTGW IHRATLAQSQAVTMLDGVAYEKIDEDGHLHVTLRDGQEKRVLPVDTIVVCAGQVEHHA LQSEATEVAPGTDGVSWKDRVYTIGGAYAAGELDAKRAIDMGVRLAHSIHDPHVVPGE HVSQATPGVEERLYQLLRRFA" gene complement(<69571..>70200) /locus_tag="PHATRDRAFT_41606" mRNA complement(<69571..>70200) /locus_tag="PHATRDRAFT_41606" /product="predicted protein" CDS complement(69571..70200) /locus_tag="PHATRDRAFT_41606" /codon_start=1 /product="predicted protein" /protein_id="EEC42944.1" /translation="MSCAFALCAWAFRWASPRSGLGVSAWAPPRPYDVVVRPETPSRR TFLFTPVVLLLASTGGTTGAAAVPLPPSVAERTALLEQARTQLVKVPALLREEKWDAV RAVLLQPPVADLWAKASGVKNILPAYAAAVGDAGGDELAVLEAKEDIVSHLRYLDMAV YNNVFNPIAVEGTVGATKALLRSYYEDPINEYNACLRALDELIALGKGL" gene 70926..>72242 /locus_tag="PHATRDRAFT_50607" mRNA 70926..>72242 /locus_tag="PHATRDRAFT_50607" /product="predicted protein" CDS 71187..72242 /locus_tag="PHATRDRAFT_50607" /codon_start=1 /product="predicted protein" /protein_id="EEC42925.1" /translation="MSVPPTESQPRPHEQPLRNRAAAPTNAGSLRDARLLLLGAAFSY VLFFAVNVHKSTILPDVIDDAVLATMGLPLASVPVSSLPSLPGWNPVHVYYGDTSHLD HVLDPRHSRRSVQWLGKGPANGRQWTSQFGQDVAVMKILDFPTGAFFLDLAANGPVWM SNTYVLETHFDWKGICVEPNPIYWYPLSFRSCHVVGAVVGARNMDQVSVLLDPGQMAP SNGIVGDTFDNRNVTQPGLVKPRFTASLTDILEHFQAPAVIDYFSLDVEGAELFIMKN FPFEKYRFLCLTIERAPPELQEILSRNGYKFVHTIRQGVDDLWVHESIYDQAKANLAI RTHEIATKNPQLPVAAA" gene <73277..>73879 /locus_tag="PHATRDRAFT_41608" mRNA <73277..>73879 /locus_tag="PHATRDRAFT_41608" /product="predicted protein" CDS 73277..73879 /locus_tag="PHATRDRAFT_41608" /codon_start=1 /product="predicted protein" /protein_id="EEC42926.1" /translation="MVPHGSASQNDWSVVDWSRIPPPVDDGGTDHLQPGLVLPSLPQG THLVSTDGARIDPSRLPGRTVLYAFPITGRPDQDLPRGWDMIPGARGCTPQSCAFRDH FRELQTLRVQHIFGVSTQTPEYQTKAVARLHLPFSLLSDQDLVCANLWKLPTVQVEGR TLLQRVTLIIDDGVVKAKFYPIFPPNQNALRVIQWLTHEE" gene complement(<75043..>75690) /locus_tag="PHATRDRAFT_17115" mRNA complement(<75043..>75690) /locus_tag="PHATRDRAFT_17115" /product="predicted protein" CDS complement(<75043..>75690) /locus_tag="PHATRDRAFT_17115" /codon_start=1 /product="predicted protein" /protein_id="EEC42945.1" /translation="IAPMLHVSTREFRQLFRILSKRVVLWTEMVVDELVYHNHEDRSN GTLETHLGYDDTNEHPVICQLGGIVPSHTALATQLAVERGYDEINLNVGCPSDRVSGK REFGAVLMKQLSRLLLLVQAMRENAGDTPISVKCRLGVDDWDSWEVLEEFVDTLRPYC RIFYVHARKCLLQVLSPAQNRLVPPLNYPRVYRLCERFPDCDFYINGGIPGLRAAK" gene <77337..78523 /locus_tag="PHATRDRAFT_50610" mRNA <77337..78523 /locus_tag="PHATRDRAFT_50610" /product="predicted protein" CDS 77337..78290 /locus_tag="PHATRDRAFT_50610" /codon_start=1 /product="predicted protein" /protein_id="EEC42927.1" /translation="MSRSSCSFAAIMQMNNAALSLVRQGQHARANRLLQTAMDCLKTE LAQPAEDTTVGGMQQSPGTASLQVVMSIPLPPYPPRVGATLPGFTATETNTNLPIRYV NNNGHSDSRMETPVANEQYNCEDFTSVPHGFFNRAFAVAPEDTATGGRRDPFAASVSG TVASATSEELVILIVILLFNTGLIYHREGIATHADRLSTTNYQVSRENNPLLKALVLY DKAIQVAESVDWSKSNSSDTFHLSTLLAVPYMALCINKAHISGEAFLNREQRSHAVHK FSETFRALGPAKNILTPEESAFFFIESWFVSVGWNHFAGAA" gene 80271..>81988 /locus_tag="PHATRDRAFT_50611" mRNA 80271..>81988 /locus_tag="PHATRDRAFT_50611" /product="predicted protein" CDS 80651..81988 /locus_tag="PHATRDRAFT_50611" /codon_start=1 /product="predicted protein" /protein_id="EEC42928.1" /translation="MLPTGWFTKTNRLRLSTLEHWLPDGGGAGAPVEGHLHLTLPDLV TNGWTWSTVYNFLDDDSTLRVVWVQPHDAFLIPGGLDDIFGQQPHFHGYTRRISVQVL TVTGLFMNTYSDSYENYMTVSVYANSPAQAALTIGDLFRLIPSSRLEGLRLVSNQGEE FPLDSHVTRQFLEANQHLKTLQFLYGTFSEEHCRVIANTMRTTHLHFREAQLRDDGRA LIECLRNNQGPTRLTLDDTQISEHNLEAIVDSIQANQQLKRLGLSDMKLTNQLVQTLS ATLRKNRWLVELDLTWNSISDENWSDLNLTIRDHPTLQALNLYATTNAGVGEIPTSRK ISRTLAIWDMVRKNEILQEINLSSTENDENLMPNIRGCLVLNQHRPKMERLCAETVYQ RQTLLGRALVAAGRQETYGPDLQFLLVSRNVETILAAPRQSRPFPENKRARVI" gene complement(82627..>83550) /locus_tag="PHATRDRAFT_50612" mRNA complement(join(82627..83267,83359..>83550)) /locus_tag="PHATRDRAFT_50612" /product="predicted protein" CDS complement(join(82794..83267,83359..83550)) /locus_tag="PHATRDRAFT_50612" /codon_start=1 /product="predicted protein" /protein_id="EEC42946.1" /translation="MDSLPDVEDLDPFPLSHDEITLCPCWIESLFECDDAMEGGDDTS SCCTSGATVKLSNVTEERREAVLAIAENKRSLEKAVELFKRFRVFRASVNRFILMISN NDRDGALSSFSEALDYRMEKGRMTRFHRDLAYGAAKRIVTIRTNVAKKYLKKNPIWSY PVLSSFVMSAVNLVTGESLTNPLDERRFEEPTNCRDLAPPITVYPKKPALLMVQGVYS RLR" gene complement(<83999..85809) /gene="Tic55" /locus_tag="PHATRDRAFT_50613" mRNA complement(join(<83999..84811,84945..85809)) /gene="Tic55" /locus_tag="PHATRDRAFT_50613" /product="Tic55 component of chloroplast import machinery" /note="Has EST support" CDS complement(join(83999..84811,84945..85628)) /gene="Tic55" /locus_tag="PHATRDRAFT_50613" /note="Putative Rieske iron-sulfur protein Tic55, part of the protein Import machinery (Translocon) Tic of the inner chloroplast envelope membrane, possesses putaive bipartite presequence for plastid targeting; GO_function: GO:16491 - oxidoreductase activity; GO_process: GO:6118 - electron transport" /codon_start=1 /product="Tic55 component of chloroplast import machinery" /protein_id="EEC42947.1" /db_xref="InterPro:IPR005806" /translation="MALRRSISRLAMVYLVTLCLKTAFVSAFSSTNTPTTPTSSVQQR SANQQALEDAPPFPRTWVPLASVYELHPDRPTPLRFLGQSYVTYQSNDGQWAVFDDAC PHRLAPLSEGRVDRQKNRLECSYHGWEFDADGRCQEIPQADFSTMQKAMQNERCHVKS YPVHVEKNILFVWPWADEDPLITVSQPHCAPEHFMEGVSENCTTYTRDLPYGWDTLLE NIVDPSHVPFAHHGLQGKREDAIPINMTSPSDLSPEGFVFQFEDRTMSMRRQGGAVFR APFVIHYKADFETPSKEKQKKRANSPKVFNLTAIMLPTKPGWSRIILMGAPRTKQIEK KEKERLVAKIFRKLPSWLVHTFSNRFLDSDLAFLHFQEQERERRGVDARAYFMPAQSD RCVSALRKWILQYAHIPGPLPAPLTDRGVLFNRWTQHGEHCRHCTSARKRVAKWRTNT LRLLAISLVLAKFTAARVVAALSLLLLNRLSAVDKAFSDGGFSHYDNH" gene 86298..90042 /locus_tag="PHATRDRAFT_50614" mRNA join(86298..89438,89526..90042) /locus_tag="PHATRDRAFT_50614" /product="predicted protein" CDS join(86481..89438,89526..89939) /locus_tag="PHATRDRAFT_50614" /codon_start=1 /product="predicted protein" /protein_id="EEC42929.1" /translation="MPDVEQHRRQSSNAELSWSEISQLTDENWQYISEDSRSGIVEIS RAGNLTFSSLDLYGREKEISTLKEAFDRSRSSRELLLISGQSGSGKSALASCVEQPVR QAKGFYLKGKFDLNQQSQPFSAIVSACSRLCEELLQQEEGLSCPGREQNSGSREERSS KQWQSVFSLDEIRTRMHEEMANEVEDLIFVVPGLADVVGIDVIQPLNDSTKDDPLEAR NRLNAAFRKFIRVLGCFGPIAMFLDDMQWADLASLELIEFLFTDPEKTGLLILGCYRD TGLDDTNGYQKLLRKLKRRDETTITEIEVRNLSVRYVNEILSDLLRTEKGRTLPLAEL VHRKTHGNAFFAIQFIKSLVDSRILKPSDSSAWAWDLEQAEKSTEPTSNVIDLMKSKL KKLPYDVCLTLQLMACLGSTFTFRVFHLIVDEFYNNPLHVDPTKLAVQPLDQRKPEEC LQLCVEQGLIVAHRRHSYRWIHDKLQEAALSLLPSDSLPIVQFRIGNLLRQNLSSVEI ESSVFVVAALLNEGSEALLTDEQRIQIAHIDLVAGKKAIESSAFVSAKYYLEKGVELL PVGSWNEHYRLTLNIYSTAAEAEYCNGNAVMVERYCDEVLKQIHRPLLDRLPAYKVLI ETTGAQGDHKKAAHLTLDVLSQLGCPFPKYAVLIQAYAGLQKARLFQRRLSTEKVNGM RQMTDIKDIWIMSLLDKMFAFAYVGRLPNILLMSILKSLQWTLKKGLSDFAPSTFARV GLVFAAFLNDPKTSEMYAEHCMSLLVRTSSRKAKVKASMIVQSFVFHYLRPLSSTTRP LTHSYELGMKIGAIDDAMWCFFFAQETKVHCGVSLNSIADELSVAIKQMQDLKQVKQE ELCYILERVVLDMTGNARDAHLLSAKYLAQDELFARLRQTEDTTMKMYFLRNRMAVAF LFERYDLLMELLEDTGYQKFIEKAQPGVFAVQSMTFRNALACVSVFHRTGDRHYLRLA NRLAWKVKKAAKQNNPNLFHYDALLDAEFAATNGKHAAALKHFGAAILLAGSRRFQND QALIYERFGEYNDREGQKDDARYSLRLAIESYQVWGARGKANQIRLKHAGLLTPPAEI EVGDFNPDFLTLRHKSLDTAHVRGTAQVEKPLGAA" gene <90500..>91660 /locus_tag="PHATRDRAFT_41615" mRNA <90500..>91660 /locus_tag="PHATRDRAFT_41615" /product="predicted protein" CDS 90500..91660 /locus_tag="PHATRDRAFT_41615" /codon_start=1 /product="predicted protein" /protein_id="EEC42930.1" /translation="MNYRLKRGRALLQNGCWMMIPFSIGMPTATVNSFHATSALFYSF IPSPTTKRKDFRQRITLFSFTGDGERGALDITRREGLFGGAILLIPKTAFADERPTSV SEDFGLLRSTSELKDCQNGALVSEQAIPGAYEQICMGLSERTVPIKMSGNRTAMLRLE QDRSGAGSTGMAVWNSSLLLTRLLETLEALQPGWIKNGNVLELGCGVGLVSLTAAILG AASVVATDGNPKVVELASRNIQANGYADCVKAQTLSWGLLDAMDNADQADWLVGSDLT YNAANWRVLAESMATIVKQEGYILYVSLGHAAFDVNAETQGFLSVAKEMGLVEVVHTD ANWPFPNIKTSLTEVLLRECVQPMEHSIVSLANGGRVMLLQRKSTQKWTKSR" gene complement(91695..>97321) /gene="Sec7C" /locus_tag="PHATRDRAFT_50615" mRNA complement(join(91695..93027,93095..>97321)) /gene="Sec7C" /locus_tag="PHATRDRAFT_50615" /product="predicted protein" CDS complement(join(91738..93027,93095..97321)) /gene="Sec7C" /locus_tag="PHATRDRAFT_50615" /note="Sec7-domain expressed protein with distant similarity to plant pattern formation protein and mammalian GDP/GTP exchange factors" /codon_start=1 /product="predicted protein" /protein_id="EEC42948.1" /db_xref="InterPro:IPR000904" /translation="MIATSSSTATGTKNQSVVAVHGSAATSSSSTASGGLLPHEGHYK DTAGLGSISGSIPIVGGVLTVNDCRKDVDVSDVRRLSRKSIPKTTTSRRGNSSPTEPD VHESSESSSSASSSSSSSATDTNNEDEEEHDEDHSPVSSKRVSVDCAVSMESALASPA VPHVPESVPPTAHCAATQTDALPTAGTGTTRTPHTGSPASAGTTQTLLVPPHVAVRVI KGEIHNVLTVLRADHRYLSHDRFLREEEETRHVVVDELQHLHEALSVWKDTTRDGTIE TTHDLPPSGGLPSCATYLPPFLHAIQAREISAPVTGAALNAIHKFLLYGFLLPLPRTD FTDVSPTAEATRGMTMIAQALLQCTFEETTAADEYKHRRGLSSMHTAGGLAQPRGAGS AANAAAKQRQAAQDEKVVLKLLELAALVVRCGVDFDRQLLSSGHIVGLLDTTLHVSHR ASRASPLLQSAASDALAQIVLQVFATTSSSTAAVTDNQGTRQTTARLEIWQQLANLLN PATHDERVTVSSLTAVNIALETCRDDLMPDEIILLQNQVCKYLLQWSTSHDTQILSLT LRVIFNLFQSIRNHLKVPLEVFLTSVHLRLLDTTLDEEREIALESLLEFCQEPALMQD LYLNYDCDVACSNLYESLVTALGKTAQPVGYDGNHKRRVGQTDVIALDASTNSEASRS RFATATTAPAVTHLSISLAAPPLNLLNRLAMDGLLAILDSIVRRCDVVPLSTETQQLR SSSLDRVNGSHGSLHSFRTLSSDDIMSEDELDYSNHLTESMLHDRKKRKHALTRVATM FNQDPMGDKWRMLAVEQGVLDSNISVHGVAELLHTAPGLDKSQVGIFLSKGPDKEYPF HAEVRASFASLYDFADLPFALALRKFLSKFRLPGEAQCIDRFMEAFSKELYHQQGASI FANADAVYVLAFSTIMLNTDLHNPTIKEDKRMTSDQFVRNNRGINGGKDLPAEFLKDL YIQIKENQIQVRREVGDLVSRHEHEDTRAAWESILAKSKEVASPFFTPAGRTRRQASR SGLHDKEMFEVLAIAVLRSFPGIFERSWDDAMVVKALRGLQQTAKLAAHFDMNSVFNE ILEFLLAKGRDYVTECITMDCIHMDGDTSVVSNSKTAVSNETMDDDETNVPETEQPIP EGLLCSSSSHSYDDITGAAVHRGLLAFDSGFVMVRKNARRVVGAWPLFVECICALRDA KALPVGLSDLDDFADSSGNVLPLSPFAKKSKRSLESYYRVKADPDVSENRKGWFRAFF KKSSKASDDDSLDDHLSTVPDKFDASLHAKVLMAIAEAADIEKVVQMGSAMLPNAETI IASLLQFVEKYPFDSNPIQEQHAVFGLELAARMLLSNRRQAPSLFMMFLKTFEKVFEL VSDTNVPSPFFIERIVVTVLRSSIHLYDFDELRPHLRASLHLLTMTLPRTFVRQIADR MACGLAIILRASYHFFETPNDWAFMGDTLDMLANHSVSRVFVFDGIASTVEHAIPVET ERAAKGREERPSLSKEASSALARILTRFVLGFYQRDLTLQVPAMLCLEKVYRHKVDLL LDAAVKKTSAECGSKDSVSEFDPLASVPDKDLWQNIAVAVYSVCRSVDVDVSRNGVEC FQRIILRTGIDQIAQEKWVAVLYLIINKQPPTTADVSRGNTFSLLGQLLNMVLPSLSY SKDNRDDLVDLIHATASLAQDNLQQGRRGSVSPLFQKTLQTVTYLSNNMVTEEWTGEP EFSAWASETLLHELEKVGAAGASLKNQEAIKRPAATPPAAAKTTPTVLRSNTGEHAQE TETHIKREKEVETEIEKSVIHASEELAEPIEDETEEHYASDFEEDDTETSEQYL" gene complement(<98575..>101751) /locus_tag="PHATRDRAFT_50616" mRNA complement(join(<98575..99267,99332..100407, 100438..101559,101595..>101751)) /locus_tag="PHATRDRAFT_50616" /product="predicted protein" CDS complement(join(98575..99267,99332..100407,100438..101559, 101595..101751)) /locus_tag="PHATRDRAFT_50616" /codon_start=1 /product="predicted protein" /protein_id="EEC42949.1" /translation="MAIPTILTVEEPERDLYGRVKEKAAISVANDQCMDLATAMRGSE KSHVILVHARLRGTDKARGRLLHIRKVRLSPVGEPWPAIVDAFSDLCVQCLASERRSK IRKALCEELESDVNQLSHLIPNFKALVDGFLESDDDTEGNGDWNDIRASFRRNEFGFT RIKLLFQRFLRAICHPISSRIVLLLDDVQWADQLSLLLIEALLSEGEPVSGFLLAITS DEPGLFRRAQVNRDLVNATKIRIRNLSKNDWIEMTKQTLKKAKSYIAAEELDILFKKT MGNPFLTVLCVKAIDEGGLLKELEIEADNGVKAGILSVIKGRLSRLAKPAQDALFLGA CFGLRFCMDWVAPLVPTYGSTRNASLQPDVMPLNWGSGRLDDSEHLSESELKETLNEA IVNGLVTKRCGIPWYEFTHHSIRDAAYDLFRNSSCEHTLRKVRFSSSSEDDTILWTAV DHLNLGSSQLHEERKLIELARLNGRAAEKSMLKLAFFSAAQYASAGLEKIGRVGGWQT DFAVTWELSTHLCRMYSCLGEHEACKRVANDVVSRSSSIFEKLGAFEAVMESSRVEGN VEEAFNIGFDVLRSLNEPFPNRVSKALLIWEIVKTKRILTRKTLKDLSGLPKMADERA CATVRFLKLLSLTFFAMGNYFSYFVASLRIVRLSTKYGVARESPKAFVVFGNILSQTS RHFNEASRYMSVALSLGEKAGKSGRAQSLAVGSWILTPLQGTVSEAVGQALYGYRLAM ECGEVVCACTSVLSYCGLYFWSGLPIPPLMKDLPTFLTMLSEYKQTVHEVGLSSLMYF IQTSTAETNPTDLYDDTVWMVRCQNAGAAIQVNTICLYRIIYAYYMQDLSSIRASQLD AHRAVKVQLSRTLQVVVCWLFVGLSDFFLAQSGCGIEFQRSGQKILRMMRRLVVKGDS KCEHMFMFLRAEKYKLVSKQSNEVLKSYDEAISGAGQAGFFNHAALANERAALYCLAR GKEKKAAQYFQEAWQGYLNWGAHSKVDQLGGWYSAYIQQSSRK" gene complement(<102447..>103268) /locus_tag="PHATRDRAFT_41618" mRNA complement(<102447..>103268) /locus_tag="PHATRDRAFT_41618" /product="predicted protein" CDS complement(102447..103268) /locus_tag="PHATRDRAFT_41618" /codon_start=1 /product="predicted protein" /protein_id="EEC42950.1" /translation="MEAHNVFASLQGLTTLVSQQQKILSGLIDTYCRMSGMAGPLEQE QIDAIISKEPAEGNGSYVITHNQVRSCLDGLGMWMIKTVEELASDEEKLSCLLASIGN LFVVAANGIANIAIVRSGNKSQAAELPPVLPYELAASNMRDFVKTIQKHRTRLQRRFS DEEIDQLSREFSIFLRAYREEPLFQDALLHSYNQKSNFSESRAATHGRFPLVQKFCGG LASAFPNTATVESDFSVINWEKDNTRQHHTDFSLEGILHCKQYNNLKDLSALIKE" gap 103617..129069 /estimated_length=25453 gene complement(<129222..>132392) /locus_tag="PHATRDRAFT_50617" mRNA complement(join(<129222..129914,129979..130271, 130448..130982,131029..131783,132089..>132392)) /locus_tag="PHATRDRAFT_50617" /product="predicted protein" CDS complement(join(129222..129914,129979..130271, 130448..130982,131029..131783,132089..132392)) /locus_tag="PHATRDRAFT_50617" /codon_start=1 /product="predicted protein" /protein_id="EEC42951.1" /translation="MAIPTILTVEEPERDLYGRVKEKAAISVANDQCMDLATAMRGSE KSHVILVHGPSGLGKTALLQHVFEERIRQEGGFFIYGKFDSVPSASPGQPLWTLSAIY QLSLLLIEALLSEGEPVSGFLLAITSDEPGLFRRAQVNRDLVNATKIRIRNFSKNDWI EMTKQTLKKAKSYIATEELDILFKKTMGNPFLTVLCVKAIDEGGLLKELEIEADNGVK AGILSVIKGRLSRLAKPAQDVLFLGACFGLRFCMDWVAPFVTTYGSTRNASLQPDVMP FNWGSGRLDDSEHLSESELKETLNEAIVNGLVTKRCGIPWFEFTHHSIRDAAYDLFRN SSCKRERIHLPIGEHTLRKQCLNLGSSQLHEERKLIELARLNGRAAEKSMLKLAFFSA AQYASAGLEKIGRVGGWQTDFAVTWELSTHLCRMYSCLGEHEACKRVANDVVSRSSSI FEKLGAFEAVMESSRVEGNVEEAFNIGFDVLRSLNEPLPNRVSKALLIWEIVKTKRIL TRNPLRICQAYQKWLTKEHVLRFASQYLSVALSLGEKAGKSGRAQSLAVGSWILTPLQ GTVSEAAGQALYGYRLAMECGEVVCACTSVLSYCGLYFWSGLPIPPLMKDLPTFLTML SEYKQTVHEVGLSSLMYFIQTSTAEANPTDLYDDTVWMVRCQNAGAAIQVNTICLYRI IYAYYMQDLSSIRASQLDAHRAVKVQLSRTLQVVVCWLFVGLSDFFLAQSGCGIEFQR SGQKILRMMRRLVVKGDSKCEHMFMFLRAEKYKLESKQSNEVLKSYDEAISGAVQAGF FNHAALANERAALYCLARGKEKKAAQYFQEAWQGYLNWGAHSKVDQLGGCYSAYIQQS SRK" gene <133227..>134659 /locus_tag="PHATRDRAFT_41620" mRNA join(<133227..133390,133725..134147,134203..>134659) /locus_tag="PHATRDRAFT_41620" /product="predicted protein" CDS join(133227..133390,133725..134147,134203..134659) /locus_tag="PHATRDRAFT_41620" /codon_start=1 /product="predicted protein" /protein_id="EEC42931.1" /translation="MLSKQFCWLLIDSFVEEFNKYMAEVFGPTEVICVDESISRWYDQ GGHWINIGLPIARSGLVSRTEDGKPSMVACVWIDREQRYFISNAYGLTPGSLYIRKQW RQEDQAPNAPTTQVTPEVPQPKVAEVYYDSCGKIDQHNCDRQDTLGVERKLVTHFWDK RVGLTIFSMIAVNLFCMYNCTVQNSVQQCRILSTGSLLLADCPNNAPFLAATLVKQQT ALPDRMQVAQPNTYAPNKVVVLAIAAPWKQRPYTGTAASIRTGAPRKQSRINYRLVLL AELIALVVGIALGLTAKSSNNNTDIFVFDNNLAEEDSRENEEGNSRKVKTMTGTCTLL CSICAPIPAAPFW" gene 137207..139259 /locus_tag="PHATRDRAFT_50618" mRNA 137207..139259 /locus_tag="PHATRDRAFT_50618" /product="predicted protein" CDS 137366..139162 /locus_tag="PHATRDRAFT_50618" /codon_start=1 /product="predicted protein" /protein_id="EEC42932.1" /translation="MKEKNDHSPKTSNHELESNEETGVNSPAESDASSPSCGEQPKQP RSSPESSKVLRNVPDKGPQEASTDGKPIATTAKNEMFAEPAQDIPFPTELQRTAQSTP GAFPQIGMGSTRSSETPVTPHSAPTRDGSQRSGSAEEDFSSAGEPPLLAATLVEDTPE RSDTTGTTGPNEAESDKLMVVAVAEPVEQRTDTEKAAFSRGASSKRWRMLYGALLIAG VVALAVGVTLALTIQTSSGSSTTSSSSTALGSPNGTNASVPDDTNTPLLNDTNTNDFN EDVEQPIPGNIPSSAPGGPVVQSTHLVAWESSCMDEKVTAEIQCGTNEILSVQEARIA ECTIQSDQGSNRAICLPLTMNGTIESLESANGNDVREIAMVLFQCTGVEDRPNGPVRA RLVPTRNVDTTAPANMDWLCVRFNENLQSAIADTVPATAMADFEVELYIVLGDFCLER RSQGDINAVRHRLRTNTRRQLVESNVSDVEVENATGDDTSEGWRLQSFVPGSCQLPAR NLLMDAEATGAAENEWLQVCYAFDNDDTGDDDDDGNDANEDELVVVHASVSCRHEIGL GPSRAAVWNEFERRIRPPLIWRELWSTTMTGV" gene 140091..>141666 /locus_tag="PHATRDRAFT_50619" mRNA 140091..>141666 /locus_tag="PHATRDRAFT_50619" /product="predicted protein" CDS 140101..141666 /locus_tag="PHATRDRAFT_50619" /codon_start=1 /product="predicted protein" /protein_id="EEC42933.1" /translation="MTNASISTNTDLPQTTDERRPLPSTSVNESNSVETSKTTAVANQ TPEESIRRSRDKPDMFAEPAQDLPFPTELQRARQSTPGAFPQGGTATRSTTLSTTTTT DASQSTASVSPLYIAASGMPLLTATLVAEDEDDATGHSETTSGTHSTPRHNDDDDEEK QRGSVVLATAEPWEQHSVTEKTLRRTRRKRCTYALVVLLGIVGLVLGVTLGITNRTNS RTDSQTTAITANDGTTTGDANGDRDSLDGDTDDALSVSQTSHVVAWPVATSCLDEPSR PLVRVSCGATETVRIRTVQNANCTLTSDRTNEATCVPDQLANSARLAVAFWDCTGIVP GSVGPVQAVLSPSLPTDTANNVPNDACSTWTVDTFTSNAPTVPTYLILGDVCPVVASN TEAVPSQDSADHDATESATNDDAWNDDDRRILTVPDTTQADWHIVTQRDGSCPAPGTN VTVASSQLQVCAWLEPNDWEMPELRVRHDRLPCRHAVDRGPSLESFWYQADQLFQTDV IVNALEPYGTPQG" gene complement(<142131..>142517) /locus_tag="PHATRDRAFT_6282" mRNA complement(<142131..>142517) /locus_tag="PHATRDRAFT_6282" /product="predicted protein" CDS complement(<142131..>142517) /locus_tag="PHATRDRAFT_6282" /note="GO_process: GO:6457 - protein folding" /codon_start=1 /product="predicted protein" /protein_id="EEC42952.1" /db_xref="InterPro:IPR001179" /translation="ASDAEGLAYLASNRAQPGVIELPSGLQYKPLVNGTGAYHPGAST PCSCHYAGTLLDGSTFDSSYDRDEPTTFAPNQVIAGWTEAMQRMVQGDQWELYIPSEL AYGERGSPPRIPPNAVLIFRIEILEIL" gene <143290..>145080 /locus_tag="PHATRDRAFT_41624" mRNA <143290..>145080 /locus_tag="PHATRDRAFT_41624" /product="predicted protein" CDS 143290..145080 /locus_tag="PHATRDRAFT_41624" /note="GO_function: GO:4806 - triacylglycerol lipase activity; GO_process: GO:6629 - lipid metabolism" /codon_start=1 /product="predicted protein" /protein_id="EEC42934.1" /db_xref="InterPro:IPR002921" /translation="MTVQRWRNGWGRVGWCILWYGALPIYGTDIPSEEGSPGSDPTTT STRTTPTPSTAIPNDYAWLNLGSSVPFFSQLFDNPDPSDDPFDRLAGSHESEDSDLFR KLASLFRSTPSLSVFPNDNSNNNYDKVHDESQKFVNQIVNTFSSPGQAQTRQQIFKLF QQSIIAMQEQMQKTFGDMQNELWERFNLLQLTYFLQHEESVKNPVWKRRQHRFMTPLP VSEAVQLGDGLFLSHLAYVDDCHLIQEYLRSFHNGAFVLRNCTTSSQPNQPAHFLAVR KIASPSQTTTKSFLTPEWKWLIHQYLPFFFRPEPLEVVLTIRGTKEIGDFLSDAMLAA AKHRNGKAHDGILKSTQWMLKTYTDDLQQLLKDSQRDRMNLWLVGHSLGGGTAALMAI ELFETQDGWVQPHALGFGTPSLVSAELSRKYKPIVKTVINDADAVPRMSGASIANAWL RVVRFNWTDAFLQDFDQTVGFLSDYFLKFKMNTDWINECSRDIRQILITWLDQKVSPG LKNLPKATEKESELIPPGNCVHLYRDGTSWQGAYTSCYFFQELEVVRHLVDDHLIPGG YYRGLLNYVREQKQNVSWKFDHDLLTLPVG" gene complement(<145543..146267) /locus_tag="PHATRDRAFT_31375" mRNA complement(join(<145543..145923,146013..146267)) /locus_tag="PHATRDRAFT_31375" /product="predicted protein" CDS complement(join(<145543..145923,146013..146135)) /locus_tag="PHATRDRAFT_31375" /note="GO_function: GO:5554 - molecular function unknown" /codon_start=1 /product="predicted protein" /protein_id="EEC42953.1" /db_xref="InterPro:IPR005024" /translation="MGNKISLEEELVNLRITSKQMHRSSKKCEKNEKAALEKLKKAIQ QGNSEGARIYGQDAIREKNQSLNHLRMASRLDACCSRIETAVRMNAVSDSMKGVVKGM GRSMASMDIEKLSSTMDKFEQQFEDLDVKTQYMEGAMNATTATSTPAEQVDELIGRVA DENNLELG" gene complement(148479..150157) /locus_tag="PHATRDRAFT_50621" mRNA complement(148479..150157) /locus_tag="PHATRDRAFT_50621" /product="predicted protein" CDS complement(148830..150092) /locus_tag="PHATRDRAFT_50621" /note="GO_component: GO:5634 - nucleus; GO_function: GO:3700 - transcription factor activity; GO_process: GO:6355 - regulation of transcription, DNA-dependent" /codon_start=1 /product="predicted protein" /protein_id="EEC42954.1" /db_xref="InterPro:IPR000232" /translation="MSDEDSAHSNEQELRRLLSERLAALASASQRESAINQPQNLLAP ALLVRHSQVQDVPIENPIQSYMEELKRVHLAAAAGSLENALRILLSTLANTASRLHPP PHGQSTTSNSSKTPSEGVARQPFVSEENEAPNPNVSVEKFLAILQGRPVLDGATPVQD ASKNLQAFQQLQSRLLLQSLVEINHQQQLCKKLPANPKPDLGNEARELVAANFLVGMR DKLESDMDASGRAGISHISRASVGFDERVAAADKRKAGIQSLSRTATTVSSVAVKPKS GSLAVPTVPSEEFSRSFSGTGSSSSDLCAIERSKAQEGREPFPQKLYRLLEEVADLGN EDVVSWMPGGLSFRIHKQRAFVRDIAPKYFRHTKMSSFMRQLQMYSFHRICEGGIVDI YMHPNFKRGFPEFLPRIRRAGAPALKGK" gene complement(<153257..>154318) /locus_tag="PHATRDRAFT_50622" mRNA complement(<153257..>154318) /locus_tag="PHATRDRAFT_50622" /product="predicted protein" CDS complement(153257..154318) /locus_tag="PHATRDRAFT_50622" /codon_start=1 /product="predicted protein" /protein_id="EEC42955.1" /translation="MGDPPQPNVEDILRRLLQIALQSSSGMASSASPSEALAPLHTTR SVEEALLRLLVGSSRDAGPDQQARQPAHRAQPLLPPPPNSLSGDQSTAGTSAHANAFP QDPISNALAQLQALSNPSRQSGYYPEYASLSHASQDLLQLLALHRQQTLQQQQQYLQT SLQSTAAALQYVALNSQAQAQQILSENSQRIPLPALPTSPVSSSAWASGVARSSTLPM APFATLPAQASAGRNPSSKSSPRPQSHRDADGPEPFPQKLFRLLNEAERLGFDHIISF MPSGKSFCIHQPHQFIKEVAPNYFRHSKLSSFTRQLQLYHFSRTVEGASVDCYVHIDF QKGHPELLYKIRRASVSKK" gene <154825..>155883 /locus_tag="PHATRDRAFT_41628" mRNA <154825..>155883 /locus_tag="PHATRDRAFT_41628" /product="predicted protein" CDS 154825..155883 /locus_tag="PHATRDRAFT_41628" /codon_start=1 /product="predicted protein" /protein_id="EEC42935.1" /translation="MSTSAHFKLSDFPHKVLDPIATLTVPPTYATIKHAQRQLMTNAA AIPTLNGGGAHGHMALTLTALAYADISDVPFVIPVAPPANPPPGATQPQITENNRVHQ RDADIYNLYVAVNNALRQQLLDAIPRIYVRALAHPMFEFSNVTCLDLLSHLWTKYGTI KPAELQKNFQSMFTPWNTTEPIESVFLQLDEAIAFSVDGNDPISEAAAVRAGYEVIAH SGLLLLDCKEWRKLPLASHTLANFQQHFSLADDDRRLTATTGSLGYANVLAATPSLTP ATVSDTLSLPFSALSVSQTSVSSPDMTYCWTHGTSKNRRHTSATCKNKAPGHRDDATA TNTLGGSTKIWTAPKPPK" CONTIG join(ABQD01000096.1:1..103616,gap(25453),ABQD01000097.1:1..27984) //