LOCUS CH471124 11111593 bp DNA linear CON 23-MAR-2015 DEFINITION Homo sapiens 211000035830314 genomic scaffold, whole genome shotgun sequence. ACCESSION CH471124 AADB02000000 VERSION CH471124.1 DBLINK BioProject: PRJNA1431 BioSample: SAMN02981219 KEYWORDS WGS. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 11111593) AUTHORS Venter,J.C., Adams,M.D., Myers,E.W., Li,P.W., Mural,R.J., Sutton,G.G., Smith,H.O., Yandell,M., Evans,C.A., Holt,R.A., Gocayne,J.D., Amanatides,P., Ballew,R.M., Huson,D.H., Wortman,J.R., Zhang,Q., Kodira,C.D., Zheng,X.H., Chen,L., Skupski,M., Subramanian,G., Thomas,P.D., Zhang,J., Gabor Miklos,G.L., Nelson,C., Broder,S., Clark,A.G., Nadeau,J., McKusick,V.A., Zinder,N., Levine,A.J., Roberts,R.J., Simon,M., Slayman,C., Hunkapiller,M., Bolanos,R., Delcher,A., Dew,I., Fasulo,D., Flanigan,M., Florea,L., Halpern,A., Hannenhalli,S., Kravitz,S., Levy,S., Mobarry,C., Reinert,K., Remington,K., Abu-Threideh,J., Beasley,E., Biddick,K., Bonazzi,V., Brandon,R., Cargill,M., Chandramouliswaran,I., Charlab,R., Chaturvedi,K., Deng,Z., Di Francesco,V., Dunn,P., Eilbeck,K., Evangelista,C., Gabrielian,A.E., Gan,W., Ge,W., Gong,F., Gu,Z., Guan,P., Heiman,T.J., Higgins,M.E., Ji,R.R., Ke,Z., Ketchum,K.A., Lai,Z., Lei,Y., Li,Z., Li,J., Liang,Y., Lin,X., Lu,F., Merkulov,G.V., Milshina,N., Moore,H.M., Naik,A.K., Narayan,V.A., Neelam,B., Nusskern,D., Rusch,D.B., Salzberg,S., Shao,W., Shue,B., Sun,J., Wang,Z., Wang,A., Wang,X., Wang,J., Wei,M., Wides,R., Xiao,C., Yan,C., Yao,A., Ye,J., Zhan,M., Zhang,W., Zhang,H., Zhao,Q., Zheng,L., Zhong,F., Zhong,W., Zhu,S., Zhao,S., Gilbert,D., Baumhueter,S., Spier,G., Carter,C., Cravchik,A., Woodage,T., Ali,F., An,H., Awe,A., Baldwin,D., Baden,H., Barnstead,M., Barrow,I., Beeson,K., Busam,D., Carver,A., Center,A., Cheng,M.L., Curry,L., Danaher,S., Davenport,L., Desilets,R., Dietz,S., Dodson,K., Doup,L., Ferriera,S., Garg,N., Gluecksmann,A., Hart,B., Haynes,J., Haynes,C., Heiner,C., Hladun,S., Hostin,D., Houck,J., Howland,T., Ibegwam,C., Johnson,J., Kalush,F., Kline,L., Koduru,S., Love,A., Mann,F., May,D., McCawley,S., McIntosh,T., McMullen,I., Moy,M., Moy,L., Murphy,B., Nelson,K., Pfannkoch,C., Pratts,E., Puri,V., Qureshi,H., Reardon,M., Rodriguez,R., Rogers,Y.H., Romblad,D., Ruhfel,B., Scott,R., Sitter,C., Smallwood,M., Stewart,E., Strong,R., Suh,E., Thomas,R., Tint,N.N., Tse,S., Vech,C., Wang,G., Wetter,J., Williams,S., Williams,M., Windsor,S., Winn-Deen,E., Wolfe,K., Zaveri,J., Zaveri,K., Abril,J.F., Guigo,R., Campbell,M.J., Sjolander,K.V., Karlak,B., Kejariwal,A., Mi,H., Lazareva,B., Hatton,T., Narechania,A., Diemer,K., Muruganujan,A., Guo,N., Sato,S., Bafna,V., Istrail,S., Lippert,R., Schwartz,R., Walenz,B., Yooseph,S., Allen,D., Basu,A., Baxendale,J., Blick,L., Caminha,M., Carnes-Stine,J., Caulk,P., Chiang,Y.H., Coyne,M., Dahlke,C., Mays,A., Dombroski,M., Donnelly,M., Ely,D., Esparham,S., Fosler,C., Gire,H., Glanowski,S., Glasser,K., Glodek,A., Gorokhov,M., Graham,K., Gropman,B., Harris,M., Heil,J., Henderson,S., Hoover,J., Jennings,D., Jordan,C., Jordan,J., Kasha,J., Kagan,L., Kraft,C., Levitsky,A., Lewis,M., Liu,X., Lopez,J., Ma,D., Majoros,W., McDaniel,J., Murphy,S., Newman,M., Nguyen,T., Nguyen,N., Nodell,M., Pan,S., Peck,J., Peterson,M., Rowe,W., Sanders,R., Scott,J., Simpson,M., Smith,T., Sprague,A., Stockwell,T., Turner,R., Venter,E., Wang,M., Wen,M., Wu,D., Wu,M., Xia,A., Zandieh,A. and Zhu,X. TITLE The sequence of the human genome JOURNAL Science 291 (5507), 1304-1351 (2001) PUBMED 11181995 REFERENCE 2 (bases 1 to 11111593) AUTHORS Mural,R.J., Istrail,S., Sutton,G., Florea,L., Halpern,A.L., Mobarry,C.M., Lippert,R., Walenz,B., Shatkay,H., Dew,I., Miller,J.R., Flanigan,M.J., Edwards,N.J., Bolanos,R., Fasulo,D., Halldorsson,B.V., Hannenhalli,S., Turner,R., Yooseph,S., Lu,F., Nusskern,D.R., Shue,B.C., Zheng,X.H., Zhong,F., Delcher,A.L., Huson,D.H., Kravitz,S.A., Mouchard,L., Reinert,K., Remington,K.A., Clark,A.G., Waterman,M.S., Eichler,E.E., Adams,M.D., Hunkapiller,M.W., Myers,E.W. and Venter,J.C. TITLE Direct Submission JOURNAL Submitted (05-JUL-2005) Celera Genomics, 45 W. Gude Dr., Rockville, MD 20850, USA COMMENT This is the November 2001 combined whole genome shotgun assembly applied to the 27 million reads of Celera's whole genome shotgun data and 16 million reads of shredded GenBank data from other human genome projects (Nature 2001. 409:860-921). It relied on Celera's paired reads and BAC end reads from TIGR for long range order and orientation. Its scaffolds were mapped to chromosomes using STS maps. For more detailed information about whole genome sequencing and Celera's assembly process, please refer to Venter, J.C. et al. Science 2001. 291:1304-1351. This version of genes, transcripts, and proteins was created in April 2002 from the whole-genome mapping of transcript and protein sequences on the Celera human genome assembly (http://www.ncbi.nlm.nih.gov/genome/guide/human/release_notes.html) by Celera Chromosome Team, Content Systems and Informatics Research. The data sets used by this annotation process were collected in 2001 and include RefSeq (NM_) sequences, manually annotated transcripts from previous Celera assemblies, GenBank mRNA and dbEST sequences, Celera internal EST and full-insert sequences of cDNA clones (unpublished), mammalian SwissProt sequences, NRAA sequences, and International Protein Index (IPI) sequences (all human unless noted otherwise). The CDS of each transcript was computationally defined by either the longest ATG-to-Stop or the longest open reading frame. All CDSs corresponding to the longest open reading frames with no starting ATG were flagged as partial. In addition, some of the genes were manually curated between 2002 and 2005. Coverage analysis of splice junction donor/acceptor pairs and single-exon transcripts was done by Applied Biosystems in August 2006, based on Dec 2005 versions of human cDNA (RefSeq, Genbank mRNA and dbEST, Celera internal EST and full insert sequences) and human SwissProt sequences. FEATURES Location/Qualifiers source 1..11111593 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" /chromosome="13" gene 16702..60364 /gene="RP11-78J21.1" /locus_tag="hCG_1981929" /note="gene_id=hCG1981929.0" /db_xref="GeneID:144983" mRNA join(16702..16793,38560..38835,44009..44149,48993..49065, 53876..54017,58977..60364) /gene="RP11-78J21.1" /locus_tag="hCG_1981929" /product="heterogeneous nuclear ribonucleoprotein A1-like, transcript variant hCT2254989" /note="gene_id=hCG1981929.0 transcript_id=hCT2254989.0; splice donor-acceptor pairs covered / total pairs = 5/5; created on 12-JAN-2004" /db_xref="GeneID:144983" mRNA join(34073..34253,38560..38835,44009..44149,48993..49065, 53876..54017,58977..60364) /gene="RP11-78J21.1" /locus_tag="hCG_1981929" /product="heterogeneous nuclear ribonucleoprotein A1-like, transcript variant hCT2254990" /note="gene_id=hCG1981929.0 transcript_id=hCT2254990.0; splice donor-acceptor pairs covered / total pairs = 5/5; created on 12-JAN-2004" /db_xref="GeneID:144983" mRNA join(34073..34253,38560..38835,44009..44149,48993..49065, 53876..54017,58977..59796,59830..60239,60299..60353) /gene="RP11-78J21.1" /locus_tag="hCG_1981929" /product="heterogeneous nuclear ribonucleoprotein A1-like, transcript variant hCT2254988" /note="gene_id=hCG1981929.0 transcript_id=hCT2254988.0; splice donor-acceptor pairs covered / total pairs = 5/7; created on 12-JAN-2004" /db_xref="GeneID:144983" CDS 59064..60026 /gene="RP11-78J21.1" /locus_tag="hCG_1981929" /note="gene_id=hCG1981929.0 transcript_id=hCT2254990.0 protein_id=hCP1797341.0 isoform=CRA_b" /codon_start=1 /product="heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b" /protein_id="EAW52041.1" /db_xref="GeneID:144983" /translation="MSKSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCV VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHL TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD KIVIQKYHTVKGHNCEVRKALPKQEMASASSSQRGRRGSGNFGGGRGDGFGGNDNFGR GGNFSGRGGFGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPM KGGNFGGRSSGPYGGGGQYFAKPQNQGGYGVSSSSSSYGSGRRF" CDS 59064..60026 /gene="RP11-78J21.1" /locus_tag="hCG_1981929" /note="gene_id=hCG1981929.0 transcript_id=hCT2254989.0 protein_id=hCP1797339.0 isoform=CRA_b" /codon_start=1 /product="heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b" /protein_id="EAW52042.1" /db_xref="GeneID:144983" /translation="MSKSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCV VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHL TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD KIVIQKYHTVKGHNCEVRKALPKQEMASASSSQRGRRGSGNFGGGRGDGFGGNDNFGR GGNFSGRGGFGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPM KGGNFGGRSSGPYGGGGQYFAKPQNQGGYGVSSSSSSYGSGRRF" CDS join(59064..59796,59830..60026) /gene="RP11-78J21.1" /locus_tag="hCG_1981929" /note="gene_id=hCG1981929.0 transcript_id=hCT2254988.0 protein_id=hCP1797342.0 isoform=CRA_a" /codon_start=1 /product="heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a" /protein_id="EAW52040.1" /db_xref="GeneID:144983" /translation="MSKSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCV VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHL TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD KIVIQKYHTVKGHNCEVRKALPKQEMASASSSQRGRRGSGNFGGGRGDGFGGNDNFGR GGNFSGRGGFGGSCGGGGYGGSGDGYSGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSG PYGGGGQYFAKPQNQGGYGVSSSSSSYGSGRRF" gene 69260..104863 /gene="SUGT1" /locus_tag="hCG_29566" /note="gene_id=hCG29566.4" /db_xref="GeneID:10910" mRNA join(69260..69528,69616..69806,74101..74191,74968..75037, 75748..75818,78029..78124,79203..79256,79650..79666, 80589..80611,82195..82291,83370..83462,92779..92882, 96537..96718,104299..104863) /gene="SUGT1" /locus_tag="hCG_29566" /product="SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), transcript variant hCT1967573" /note="gene_id=hCG29566.4 transcript_id=hCT1967573.1; splice donor-acceptor pairs covered / total pairs = 13/13; created on 26-AUG-2002" /db_xref="GeneID:10910" mRNA join(69260..69528,69616..69673,74101..74191,74968..75037, 75748..75818,79203..79264,80589..80611,82195..82291, 83370..83477,92792..92882,96537..96718,104299..104863) /gene="SUGT1" /locus_tag="hCG_29566" /product="SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), transcript variant hCT20731" /note="gene_id=hCG29566.4 transcript_id=hCT20731.3; splice donor-acceptor pairs covered / total pairs = 11/11; created on 26-AUG-2002" /db_xref="GeneID:10910" mRNA join(69260..69528,69616..69673,74101..74191,74968..75037, 75748..75818,79203..79256,79650..79666,80589..80611, 82195..82291,83370..83477,92792..92882,96537..96718, 104299..104863) /gene="SUGT1" /locus_tag="hCG_29566" /product="SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), transcript variant hCT2254995" /note="gene_id=hCG29566.4 transcript_id=hCT2254995.0; splice donor-acceptor pairs covered / total pairs = 12/12; created on 26-AUG-2002" /db_xref="GeneID:10910" mRNA join(69409..69528,69616..69673,74101..74191,74968..75037, 75748..75818,78029..78124,79203..79264,80589..80611, 82195..82291,83370..83477,92792..92882,96537..96718, 104299..104436) /gene="SUGT1" /locus_tag="hCG_29566" /product="SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), transcript variant hCT2352518" /note="gene_id=hCG29566.4 transcript_id=hCT2352518.0; splice donor-acceptor pairs covered / total pairs = 12/12; created on 13-JUL-2004" /db_xref="GeneID:10910" CDS join(69491..69528,69616..69673,74101..74191,74968..75037, 75748..75818,78029..78124,79203..79264,80589..80611, 82195..82291,83370..83477,92792..92882,96537..96718, 104299..104400) /gene="SUGT1" /locus_tag="hCG_29566" /note="gene_id=hCG29566.4 transcript_id=hCT2352518.0 protein_id=hCP1917748.0 isoform=CRA_d" /codon_start=1 /product="SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), isoform CRA_d" /protein_id="EAW52046.1" /db_xref="GeneID:10910" /translation="MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDD AQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETF TEGQKLDIETGFHRVGQAGLQLLTSSDPPALDSQSAGITGADANFSVWIKRCQEAQNG MWWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLK LELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPS SSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGG TVLSTNWSDVGKRKVEINPPDDMEWKKY" CDS join(69491..69528,69616..69673,74101..74191,74968..75037, 75748..75818,79203..79264,80589..80611,82195..82291, 83370..83477,92792..92882,96537..96718,104299..104400) /gene="SUGT1" /locus_tag="hCG_29566" /note="gene_id=hCG29566.4 transcript_id=hCT20731.3 protein_id=hCP44531.2 isoform=CRA_b" /codon_start=1 /product="SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), isoform CRA_b" /protein_id="EAW52044.1" /db_xref="GeneID:10910" /translation="MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDD AQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETF TEGQKLDSADANFSVWIKRCQEAQNGMWWTHQSKIKYDWYQTESQVVITLMIKNVQKN DVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVR WEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNR LFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY" CDS join(69491..69528,69616..69673,74101..74191,74968..75037, 75748..75818,79203..79256,79650..79666,80589..80611, 82195..82291,83370..83477,92792..92882,96537..96718, 104299..104400) /gene="SUGT1" /locus_tag="hCG_29566" /note="gene_id=hCG29566.4 transcript_id=hCT2254995.0 protein_id=hCP1797344.0 isoform=CRA_c" /codon_start=1 /product="SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), isoform CRA_c" /protein_id="EAW52045.1" /db_xref="GeneID:10910" /translation="MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDD AQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETF TEGQKLDSADANFSVWIKRCQEAQNGSESEVWTHQSKIKYDWYQTESQVVITLMIKNV QKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPE AVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAA LNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY" CDS join(75024..75037,75748..75818,78029..78124,79203..79256, 79650..79666,80589..80611,82195..82291,83370..83462, 92779..92796) /gene="SUGT1" /locus_tag="hCG_29566" /note="gene_id=hCG29566.4 transcript_id=hCT1967573.1 protein_id=hCP1782011.1 isoform=CRA_a" /codon_start=1 /product="SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), isoform CRA_a" /protein_id="EAW52043.1" /db_xref="GeneID:10910" /translation="MLRKGICEYHEKNYAAALETFTEGQKLDIETGFHRVGQAGLQLL TSSDPPALDSQSAGITGADANFSVWIKRCQEAQNGSESEVWTHQSKIKYDWYQTESQV VITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVFPPD " gene complement(119862..156559) /gene="LECT1" /locus_tag="hCG_29565" /note="gene_id=hCG29565.3" /db_xref="GeneID:11061" mRNA complement(join(119862..120403,125130..125296, 129310..129463,140591..140704,149812..149952, 155623..155763,156222..156559)) /gene="LECT1" /locus_tag="hCG_29565" /product="leukocyte cell derived chemotaxin 1, transcript variant hCT20730" /note="gene_id=hCG29565.3 transcript_id=hCT20730.3; splice donor-acceptor pairs covered / total pairs = 6/6; created on 26-AUG-2002" /db_xref="GeneID:11061" mRNA complement(join(119862..120400,125130..125296, 129310..129463,140591..140704,149812..149952, 155623..155763,156222..156404)) /gene="LECT1" /locus_tag="hCG_29565" /product="leukocyte cell derived chemotaxin 1, transcript variant hCT2352516" /note="gene_id=hCG29565.3 transcript_id=hCT2352516.0; splice donor-acceptor pairs covered / total pairs = 6/6; created on 13-JUL-2004" /db_xref="GeneID:11061" CDS complement(join(120188..120400,125130..125296, 129310..129463,140591..140704,149812..149952, 155623..155763,156222..156374)) /gene="LECT1" /locus_tag="hCG_29565" /note="gene_id=hCG29565.3 transcript_id=hCT2352516.0 protein_id=hCP1917747.0 isoform=CRA_a" /codon_start=1 /product="leukocyte cell derived chemotaxin 1, isoform CRA_a" /protein_id="EAW52047.1" /db_xref="GeneID:11061" /translation="MPCTSGQRDRSQGAQGVSKCLTPPAANMTENSDKVPIALVGPDD VEFCSPPAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIGAFYFWKGSDSHIYNV HYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGITGIRFAGGEKCYI KAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVKDNSFLSSKVLE LCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSV QEDSQAFNPDNPYHQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPY NYQGCRSACRVIMPCSWWVARILGMV" CDS complement(join(120188..120403,125130..125296, 129310..129463,140591..140704,149812..149952, 155623..155763,156222..156374)) /gene="LECT1" /locus_tag="hCG_29565" /note="gene_id=hCG29565.3 transcript_id=hCT20730.3 protein_id=hCP44530.3 isoform=CRA_b" /codon_start=1 /product="leukocyte cell derived chemotaxin 1, isoform CRA_b" /protein_id="EAW52048.1" /db_xref="GeneID:11061" /translation="MPCTSGQRDRSQGAQGVSKCLTPPAANMTENSDKVPIALVGPDD VEFCSPPAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIGAFYFWKGSDSHIYNV HYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGITGIRFAGGEKCYI KAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVKDNSFLSSKVLE LCGDLPIFWLKPTYPKEIQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSV QEDSQAFNPDNPYHQQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWP YNYQGCRSACRVIMPCSWWVARILGMV" gene 237051..238109 /locus_tag="hCG_2040403" /note="gene_id=hCG2040403.1" /pseudo mRNA join(237051..237615,237913..238109) /locus_tag="hCG_2040403" /note="gene_id=hCG2040403.1 transcript_id=hCT2345613.1; splice donor-acceptor pairs covered / total pairs = 0/1; created on 12-AUG-2003" /pseudo gene complement(260544..265215) /gene="PCDH8" /locus_tag="hCG_27503" /note="gene_id=hCG27503.4" /db_xref="GeneID:5100" mRNA complement(join(260544..261503,261995..262202, 262667..265215)) /gene="PCDH8" /locus_tag="hCG_27503" /product="protocadherin 8, transcript variant hCT1968177" /note="gene_id=hCG27503.4 transcript_id=hCT1968177.1; splice donor-acceptor pairs covered / total pairs = 2/2; created on 26-AUG-2002" /db_xref="GeneID:5100" mRNA complement(join(260544..261503,261995..262202, 262376..265215)) /gene="PCDH8" /locus_tag="hCG_27503" /product="protocadherin 8, transcript variant hCT18643" /note="gene_id=hCG27503.4 transcript_id=hCT18643.4; splice donor-acceptor pairs covered / total pairs = 2/2; created on 26-AUG-2002" /db_xref="GeneID:5100" mRNA complement(join(260549..260750,260963..261503, 261995..262202,262667..265215)) /gene="PCDH8" /locus_tag="hCG_27503" /product="protocadherin 8, transcript variant hCT2255127" /note="gene_id=hCG27503.4 transcript_id=hCT2255127.0; splice donor-acceptor pairs covered / total pairs = 2/3; created on 26-AUG-2002" /db_xref="GeneID:5100" CDS complement(join(261130..261503,261995..262202, 262667..265006)) /gene="PCDH8" /locus_tag="hCG_27503" /note="gene_id=hCG27503.4 transcript_id=hCT1968177.1 protein_id=hCP1782532.0 isoform=CRA_b" /codon_start=1 /product="protocadherin 8, isoform CRA_b" /protein_id="EAW52050.1" /db_xref="GeneID:5100" /translation="MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGT VIGTLAEDLHMKVSGDTSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQC VLAFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPV DEDVGANGLQTVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQ DGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEG PNGDVVFAFGARTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPR AATCKVIVRIRDVNDNAPDIAITPLAAPGAPATSPFAAAAAAAALGGADASSPAGAGT PEAGATSLVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVV TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRE NNPPGAYLATVAARDRDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRS FDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVP GRTAKDTVVARVQARDADEGANGELAFELQQQEPREAFAIGRRTGEILLTGDLSQEPP GRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAAPASAGSPERSRPPGSRLGVS GSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEPYGASPGFGKEPAPPVAV WKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTA ECKILGHSDRCWSPSCSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKT VGLQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANEN V" CDS complement(join(261130..261503,261995..262202, 262667..265006)) /gene="PCDH8" /locus_tag="hCG_27503" /note="gene_id=hCG27503.4 transcript_id=hCT2255127.0 protein_id=hCP1797338.0 isoform=CRA_b" /codon_start=1 /product="protocadherin 8, isoform CRA_b" /protein_id="EAW52051.1" /db_xref="GeneID:5100" /translation="MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGT VIGTLAEDLHMKVSGDTSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQC VLAFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPV DEDVGANGLQTVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQ DGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEG PNGDVVFAFGARTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPR AATCKVIVRIRDVNDNAPDIAITPLAAPGAPATSPFAAAAAAAALGGADASSPAGAGT PEAGATSLVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVV TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRE NNPPGAYLATVAARDRDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRS FDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVP GRTAKDTVVARVQARDADEGANGELAFELQQQEPREAFAIGRRTGEILLTGDLSQEPP GRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAAPASAGSPERSRPPGSRLGVS GSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEPYGASPGFGKEPAPPVAV WKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTA ECKILGHSDRCWSPSCSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKT VGLQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANEN V" CDS complement(join(261130..261503,261995..262202, 262376..265006)) /gene="PCDH8" /locus_tag="hCG_27503" /note="gene_id=hCG27503.4 transcript_id=hCT18643.4 protein_id=hCP44528.2 isoform=CRA_a" /codon_start=1 /product="protocadherin 8, isoform CRA_a" /protein_id="EAW52049.1" /db_xref="GeneID:5100" /translation="MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGT VIGTLAEDLHMKVSGDTSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQC VLAFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPV DEDVGANGLQTVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQ DGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEG PNGDVVFAFGARTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPR AATCKVIVRIRDVNDNAPDIAITPLAAPGAPATSPFAAAAAAAALGGADASSPAGAGT PEAGATSLVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVV TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRE NNPPGAYLATVAARDRDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRS FDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVP GRTAKDTVVARVQARDADEGANGELAFELQQQEPREAFAIGRRTGEILLTGDLSQEPP GRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAAPASAGSPERSRPPGSRLGVS GSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEVRKGGALREERPGAAGGG ASAPGSPEEAARGAGPRPNMFDVLTFPGTGKAPFGSPAADAPPPAVAAAEVPGSEGGS ATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHSFNTISGREAEKFSG KDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCSGP NAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVLHRDYDRTV TLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV" gene <445585..468806 /gene="OLFM4" /locus_tag="hCG_29567" /note="gene_id=hCG29567.3" /db_xref="GeneID:10562" mRNA join(<445585..445788,451097..451249,458659..458871, 459854..460013,466718..468806) /gene="OLFM4" /locus_tag="hCG_29567" /product="olfactomedin 4, transcript variant hCT20732" /note="gene_id=hCG29567.3 transcript_id=hCT20732.3; splice donor-acceptor pairs covered / total pairs = 4/4; created on 26-AUG-2002" /db_xref="GeneID:10562" mRNA join(<445585..445788,451097..451249,458659..458871, 459854..460013,466718..467596,467851..468806) /gene="OLFM4" /locus_tag="hCG_29567" /product="olfactomedin 4, transcript variant hCT2254982" /note="gene_id=hCG29567.3 transcript_id=hCT2254982.0; splice donor-acceptor pairs covered / total pairs = 4/5; created on 26-AUG-2002" /db_xref="GeneID:10562" CDS join(445585..445788,451097..451249,458659..458871, 459854..460013,466718..467520) /gene="OLFM4" /locus_tag="hCG_29567" /note="gene_id=hCG29567.3 transcript_id=hCT2254982.0 protein_id=hCP1797355.0 isoform=CRA_a" /codon_start=1 /product="olfactomedin 4, isoform CRA_a" /protein_id="EAW52052.1" /db_xref="GeneID:10562" /translation="MRPGLSFLLALLFFLGQAAGDLGDVGPPIPSPGFSSFPGVDSSS SFSSSSRSGSSSSRSLGSGGSVSQLFSNFTGSVDDRGTCQCSVSLPDTTFPVDRVERL EFTAHVLSQKFEKELSKVREYVQLISVYEKKLLNLTVRIDIMEKDTISYTELDFELIK VEVKEMEKLVIQLKESFGGSSEIVDQLEVEIRNMTLLVEKLETLDKNNVLAIRREIVA LKTKLKECEASKDQNTPVVHPPPTPGSCGHGGVVNISKPSVVQLNWRGFSYLYGAWGR DYSPQHPNKGLYWVAPLNTDGRLLEYYRLYNTLDDLLLYINARELRITYGQGSGTAVY NNNMYVNMYNTGNIARVNLTTNTIAVTQTLPNAAYNNRFSYANVAWQDIDFAVDENGL WVIYSTEASTGNMVISKLNDTTLQVLNTWYTKQYKPSASNAFMVCGVLYATRTMNTRT EEIFYYYDTNTGKEGKLDIVMHKMQEKVQSINYNPFDQKLYVYNDGYLLNYDLSVLQK PQ" CDS join(445585..445788,451097..451249,458659..458871, 459854..460013,466718..467520) /gene="OLFM4" /locus_tag="hCG_29567" /note="gene_id=hCG29567.3 transcript_id=hCT20732.3 protein_id=hCP44532.2 isoform=CRA_a" /codon_start=1 /product="olfactomedin 4, isoform CRA_a" /protein_id="EAW52053.1" /db_xref="GeneID:10562" /translation="MRPGLSFLLALLFFLGQAAGDLGDVGPPIPSPGFSSFPGVDSSS SFSSSSRSGSSSSRSLGSGGSVSQLFSNFTGSVDDRGTCQCSVSLPDTTFPVDRVERL EFTAHVLSQKFEKELSKVREYVQLISVYEKKLLNLTVRIDIMEKDTISYTELDFELIK VEVKEMEKLVIQLKESFGGSSEIVDQLEVEIRNMTLLVEKLETLDKNNVLAIRREIVA LKTKLKECEASKDQNTPVVHPPPTPGSCGHGGVVNISKPSVVQLNWRGFSYLYGAWGR DYSPQHPNKGLYWVAPLNTDGRLLEYYRLYNTLDDLLLYINARELRITYGQGSGTAVY NNNMYVNMYNTGNIARVNLTTNTIAVTQTLPNAAYNNRFSYANVAWQDIDFAVDENGL WVIYSTEASTGNMVISKLNDTTLQVLNTWYTKQYKPSASNAFMVCGVLYATRTMNTRT EEIFYYYDTNTGKEGKLDIVMHKMQEKVQSINYNPFDQKLYVYNDGYLLNYDLSVLQK PQ" gene <599164..633131 /locus_tag="hCG_1745487" /note="gene_id=hCG1745487.2" mRNA join(<599164..599212,600644..600745,609358..609452, 616900..617103,617213..617423,617469..617749, 617924..618088,618128..618361,618418..618723, 618766..618982,619000..619176,619872..620005, 630071..630201,632904..633131) /locus_tag="hCG_1745487" /product="hCG1745487" /note="gene_id=hCG1745487.2 transcript_id=hCT1783759.2; splice donor-acceptor pairs covered / total pairs = 0/13; created on 26-AUG-2002" CDS join(599164..599212,600644..600745,609358..609452, 616900..617103,617213..617423,617469..617749, 617924..618088,618128..618361,618418..618669) /locus_tag="hCG_1745487" /note="gene_id=hCG1745487.2 transcript_id=hCT1783759.2 protein_id=hCP1741937.2" /codon_start=1 /product="hCG1745487" /protein_id="EAW52054.1" /translation="MEACYKQPVALHLCVLAVAQEAGVHAKHDGPAELKRQDKRSGLL KWSVAAYTQSVSQNMSSSLPAAVQSPKKNADQPLNLVLREVPSQFQLMKQFNSSLLRV REGYGQLTVGDTGLDCEALCGQAPQCVLVFDVVSFSQEQFLLVHVEVEDVGANGLQSV RLAQPHSPFSRGAAEARGRRSVCGPGAAAGAGPREPGRRQPGAGGPGRWPPAALRHGC LQRHGGRSGAGGGAPVGSLLLDLDAADPDEGPNGDVVFAFGACTQREARRLFQLDPRS GRLTLAGPVDYQSQDTYELHVRAQDRAAACKVILRIRDAGAATLVPEWAARESLVALV STSDRDSGANRQMRCALYWQVHFRLQRAYAGSCLVYNLTLVTADRGAPPLCTRRPYTV RVGYEKDNAPLFTRPVYEVSVSENTPPSAYLATVAALDPDLGPNGQVTYRLLEAEELR ARRHFDCEELAEMQLRLEALDGCSQPLWGLAIVWLQVEDQNYHAPRLVAPLLSHGSAQ LPLPWDAPLGYLLTRLQAKDED" gap 745504..745523 /estimated_length=20 gene <762383..828027 /locus_tag="hCG_2038503" /note="gene_id=hCG2038503.0" mRNA join(<762383..763130,807580..807807,827147..828027) /locus_tag="hCG_2038503" /product="hCG2038503" /note="gene_id=hCG2038503.0 transcript_id=hCT2342929.0; splice donor-acceptor pairs covered / total pairs = 2/2; created on 07-APR-2003" CDS <762527..762880 /locus_tag="hCG_2038503" /note="gene_id=hCG2038503.0 transcript_id=hCT2342929.0 protein_id=hCP1908357.0" /codon_start=1 /product="hCG2038503" /protein_id="EAW52055.1" /translation="SGNSWPLTGFSWKEALTDCEPVTLHIQLSIMPYITLKVQYGYQG LFATGWGQIWAICIFYLQERMAFSVLNFLPCFGTGERHHFSRPLGYPGNSLELMELFA MRFCTLHRWNCHHPM" gene <1232568..1293277 /locus_tag="hCG_2038263" /note="gene_id=hCG2038263.0" mRNA join(<1232568..1232642,1255888..1255938,1257832..1257959, 1261494..1261671,1287625..1287687,1290612..1293277) /locus_tag="hCG_2038263" /product="hCG2038263" /note="gene_id=hCG2038263.0 transcript_id=hCT2342689.0; splice donor-acceptor pairs covered / total pairs = 5/5; created on 07-APR-2003" CDS <1290781..1291152 /locus_tag="hCG_2038263" /note="gene_id=hCG2038263.0 transcript_id=hCT2342689.0 protein_id=hCP1908360.0" /codon_start=1 /product="hCG2038263" /protein_id="EAW52056.1" /translation="AVKNPATPFGSRLPPRPPTPRPPIGHTHEGLTCDQSEAEVETPP AVNQRLKWLVILGARTRPICCTCCSPAYTTWLHLLFFCLCELASPAVLLLLRTGCTCC SPAHALTPAHPSSLFSYLVSP" gene complement(1857948..1858607) /locus_tag="hCG_1981756" /note="gene_id=hCG1981756.2" /pseudo mRNA complement(1857948..1858607) /locus_tag="hCG_1981756" /note="gene_id=hCG1981756.2 transcript_id=hCT2254750.1; overlap evidence=yes; created on 21-APR-2004" /pseudo gene 2480057..2578598 /locus_tag="hCG_2045009" /note="gene_id=hCG2045009.0" mRNA join(2480057..2480114,2523877..2523943,2578065..2578598) /locus_tag="hCG_2045009" /product="hCG2045009" /note="gene_id=hCG2045009.0 transcript_id=hCT2359844.0; splice donor-acceptor pairs covered / total pairs = 2/2; created on 16-AUG-2004" CDS 2578090..2578260 /locus_tag="hCG_2045009" /note="gene_id=hCG2045009.0 transcript_id=hCT2359844.0 protein_id=hCP1925074.0" /codon_start=1 /product="hCG2045009" /protein_id="EAW52057.1" /translation="MRSATVKQAALGDQFTLPCEGSSCQLPPFCDSFSFSSPCHPAKI VHCRSTGEHLPP" gap 2784889..2784908 /estimated_length=20 gene 4688737..>4700696 /locus_tag="hCG_28692" /note="gene_id=hCG28692.1" mRNA join(4688737..4688865,4700086..4700272,4700311..>4700696) /locus_tag="hCG_28692" /product="hCG28692" /note="gene_id=hCG28692.1 transcript_id=hCT19847.2; splice donor-acceptor pairs covered / total pairs = 0/2; created on 26-AUG-2002" CDS join(4688758..4688865,4700086..4700272,4700311..>4700696) /locus_tag="hCG_28692" /note="gene_id=hCG28692.1 transcript_id=hCT19847.2 protein_id=hCP44071.2" /codon_start=1 /product="hCG28692" /protein_id="EAW52058.1" /translation="MVEVMSYLTHEFGRTLPFGASRPYKQMGAGLLSQPVGLLAGGVV TAISKAAGAPIEWLKLLLQVQHATKEITTDKQYKHIIDCVVCIPKEERVLSFWREALN FAFEISTSRSSWVVWTRGPTFSTMLQGTWHQACAGATSLCFVYPLDFVCTNLPVDVGK AGAKREFRSLGDCLVKIYKSNRIKGLHQGFTMSVQGISIYPAAYFSICDTAKGMLPDS KSTTSSSAE" gene 5017040..5111238 /gene="PCDH17" /locus_tag="hCG_27727" /note="gene_id=hCG27727.2" /db_xref="GeneID:27253" mRNA join(5017040..5020341,5051693..5051751,5051878..5052058, 5109829..5111238) /gene="PCDH17" /locus_tag="hCG_27727" /product="protocadherin 17, transcript variant hCT18869" /note="gene_id=hCG27727.2 transcript_id=hCT18869.2; splice donor-acceptor pairs covered / total pairs = 3/3; created on 26-AUG-2002" /db_xref="GeneID:27253" mRNA join(5017040..5020341,5051693..5051751,5051848..>5051920) /gene="PCDH17" /locus_tag="hCG_27727" /product="protocadherin 17, transcript variant hCT2254638" /note="gene_id=hCG27727.2 transcript_id=hCT2254638.0; splice donor-acceptor pairs covered / total pairs = 1/2; created on 26-AUG-2002" /db_xref="GeneID:27253" mRNA join(5017751..5020341,5051693..5051751,5051886..5052058, 5109829..5110748) /gene="PCDH17" /locus_tag="hCG_27727" /product="protocadherin 17, transcript variant hCT2352517" /note="gene_id=hCG27727.2 transcript_id=hCT2352517.0; splice donor-acceptor pairs covered / total pairs = 3/3; created on 13-JUL-2004" /db_xref="GeneID:27253" CDS join(5017777..5020341,5051693..5051751,5051886..5052058, 5109829..5110511) /gene="PCDH17" /locus_tag="hCG_27727" /note="gene_id=hCG27727.2 transcript_id=hCT2352517.0 protein_id=hCP1917746.0 isoform=CRA_b" /codon_start=1 /product="protocadherin 17, isoform CRA_b" /protein_id="EAW52060.1" /db_xref="GeneID:27253" /translation="MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGRDARL QPGLPPAERGGGGRSKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKC QLSLEVFANDKEICMIKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPD AGENGLRTYLLTRDDHGLFGLDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDG GEPPRSATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNG EVLYSFSSYVPDRVRELFSIDPKTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAH CKVTVKLIDRNDNAPSIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVL GGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSP PLNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPDLGQNGTVS YSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESN ATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLT YEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPTLSAVAKLIIR SVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILLAAMITIAVKCKRENKEIRTY NCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAMNVMNVVSSPSLATSPMYF DYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQGTNASETPATRMSIIQT DNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSV REALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQFPAANQAENADYRTN LFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQ EVPSASSSPTKACIEPCTSTKGSLDGCEAKPGALAEASSQYLPTDSQYLSPSKQPRDP PFMASDQMARVFADVHSRASRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVREIDKLL QDCRGNDPVAVRK" CDS join(5017777..5020341,5051693..5051751,5051878..5051923) /gene="PCDH17" /locus_tag="hCG_27727" /note="gene_id=hCG27727.2 transcript_id=hCT18869.2 protein_id=hCP44070.1 isoform=CRA_c" /codon_start=1 /product="protocadherin 17, isoform CRA_c" /protein_id="EAW52061.1" /db_xref="GeneID:27253" /translation="MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGRDARL QPGLPPAERGGGGRSKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKC QLSLEVFANDKEICMIKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPD AGENGLRTYLLTRDDHGLFGLDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDG GEPPRSATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNG EVLYSFSSYVPDRVRELFSIDPKTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAH CKVTVKLIDRNDNAPSIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVL GGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSP PLNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPDLGQNGTVS YSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESN ATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLT YEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPTLSAVAKLIIR SVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILLAAMITIAVKCKRENKEIRTY NCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAMNVMNVVSSPSLATSPMYF DYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQGTNASETPATRMSIIQT DNFPAEPNYMGSRQQFVQSISVAPRLRTQKEPA" CDS join(5017777..5020341,5051693..5051751,5051848..>5051920) /gene="PCDH17" /locus_tag="hCG_27727" /note="gene_id=hCG27727.2 transcript_id=hCT2254638.0 protein_id=hCP1797383.0 isoform=CRA_a" /codon_start=1 /product="protocadherin 17, isoform CRA_a" /protein_id="EAW52059.1" /db_xref="GeneID:27253" /translation="MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGRDARL QPGLPPAERGGGGRSKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKC QLSLEVFANDKEICMIKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPD AGENGLRTYLLTRDDHGLFGLDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDG GEPPRSATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNG EVLYSFSSYVPDRVRELFSIDPKTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAH CKVTVKLIDRNDNAPSIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVL GGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSP PLNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPDLGQNGTVS YSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESN ATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLT YEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPTLSAVAKLIIR SVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILLAAMITIAVKCKRENKEIRTY NCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAMNVMNVVSSPSLATSPMYF DYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQGTNASETPATRMSIIQT DNFPAEPNYMGSRQQFVQRQHFLFFFFICISVAPRLRTQKEPA" gene 5111382..5114525 /locus_tag="hCG_1981682" /note="gene_id=hCG1981682.0" mRNA 5111382..5114525 /locus_tag="hCG_1981682" /product="hCG1981682" /note="gene_id=hCG1981682.0 transcript_id=hCT2254640.0; overlap evidence=yes; created on 26-AUG-2002" CDS 5112090..5112368 /locus_tag="hCG_1981682" /note="gene_id=hCG1981682.0 transcript_id=hCT2254640.0 protein_id=hCP1797386.0" /codon_start=1 /product="hCG1981682" /protein_id="EAW52062.1" /translation="MYQQWLLALCSVFQEVWVLTKCFPLSQCSSASFCWCPLRTIHLL FLHLVTPFLVTFSEFQTYFHMRLRNLKFQELGKIKLALAEVAADGKMP" gene <5868912..5919633 /locus_tag="hCG_1639925" /note="gene_id=hCG1639925.3" mRNA join(<5868912..5868962,5873838..5873915,5917156..5917920, 5918052..5918550,5918713..>5919557) /locus_tag="hCG_1639925" /product="hCG1639925, transcript variant hCT2254594" /note="gene_id=hCG1639925.3 transcript_id=hCT2254594.0; splice donor-acceptor pairs covered / total pairs = 0/4; created on 26-AUG-2002" CDS join(5868912..5868962,5873838..5873915,5917156..5917920, 5918052..5918550,5918713..>5919557) /locus_tag="hCG_1639925" /note="gene_id=hCG1639925.3 transcript_id=hCT2254594.0 protein_id=hCP1797394.0 isoform=CRA_a" /codon_start=1 /product="hCG1639925, isoform CRA_a" /protein_id="EAW52063.1" /translation="MITNTIDYYSQSLFGSKRHRMHKEEDIELLPKVSSPYCLLNLLL IVAPTSLGNCGHRQSSLGAMEAPRATPQPYWGLVLEEPRRVMAALTEGRRPDSNPYGL PWELVICAAVVGFFAVPFFLWRSFRSVRSRLYVGREKKLAVALSGLIEEKCRLLEKFS LVQKEYESYEIESSLDDSSFEKEATEAQSLEATCEKLSRSNSELEHEIPCLEKELKEE KSKHSEQDEVMADISKRIQSLEDESKSLKSHVAEAKMTFKRFQMNEERMKIGIQYALN ENSQLQESQKQLLQEAEAWKEQAAVLEEDITDDGNLELEMNSESEDGAYVDNPPKGAL KKLLHAAKLNASLTTLEGERNQIYIQLSEVDKTKEELRGHIKNLQTEQVSLQLENTHF ESENQKLQQKLKVMTELYQENEMKLYRKLIVEENNRLEKEKLSKVDEMISHAAEELET CRKQANDLEEEFQRKKDPYALDVPNTAFGREHSSYGPSPLGRPSSEMRAFLYLPSLLE GPLRLSPLLPGGGGRGPRGPGNPLDHQITKERGESSCDRFTDPHRAPSDTGFLSPPWE QDCRMMSPPPGQSYPDSALPPQRQDRFYSNYARRSGPAELRSFNKPPLDKMDGSMPSE MESSRNDTKDNLGNLNVADSSLPAGNEVTGPGFVPPPLAPIRGPLFPVDMRGPFMRRG PPFPPPPPGTMFGASPDYFPPRDVPGPPRASICNEKCLSTEGFSSLPSPKTWISPHHP HILKIE" gap 5902245..5902264 /estimated_length=20 gap 5915231..5916306 /estimated_length=1076 mRNA join(5917180..5919441,5919572..5919633) /locus_tag="hCG_1639925" /product="hCG1639925, transcript variant hCT1640052" /note="gene_id=hCG1639925.3 transcript_id=hCT1640052.3; splice donor-acceptor pairs covered / total pairs = 0/1; created on 26-AUG-2002" CDS 5917216..5918076 /locus_tag="hCG_1639925" /note="gene_id=hCG1639925.3 transcript_id=hCT1640052.3 protein_id=hCP1625141.3 isoform=CRA_b" /codon_start=1 /product="hCG1639925, isoform CRA_b" /protein_id="EAW52064.1" /translation="MEAPRATPQPYWGLVLEEPRRVMAALTEGRRPDSNPYGLPWELV ICAAVVGFFAVPFFLWRSFRSVRSRLYVGREKKLAVALSGLIEEKCRLLEKFSLVQKE YESYEIESSLDDSSFEKEATEAQSLEATCEKLSRSNSELEHEIPCLEKELKEEKSKHS EQDEVMADISKRIQSLEDESKSLKSHVAEAKMTFKRFQMNEERMKIGIQYALNENSQL QESQKQLLQEAEAWKEQVSELNKQQKITFEDSKVHAEQVLNDKENHIKTLTERLLKIT KIRLLCWKKT" gene complement(6139785..>6141022) /locus_tag="hCG_1644983" /note="gene_id=hCG1644983.3" mRNA complement(join(6139785..6140786,6140809..>6141022)) /locus_tag="hCG_1644983" /product="hCG1644983" /note="gene_id=hCG1644983.3 transcript_id=hCT1645110.3; splice donor-acceptor pairs covered / total pairs = 0/1; created on 26-AUG-2002" CDS complement(join(6140605..6140786,6140809..6141022)) /locus_tag="hCG_1644983" /note="gene_id=hCG1644983.3 transcript_id=hCT1645110.3 protein_id=hCP1640736.3" /codon_start=1 /product="hCG1644983" /protein_id="EAW52065.1" /translation="MVREPSFCYALGVKLNAAQKYYKKKVYRKLALKYHSRKNLNEGD KFRQISPACQVLSDAKKSKLYVKGGKPGSASGSPVDIFDMIFGGEGGSMQRERKGKNV CQLSITLEDLYKGVARKLALQIKQKKCDL" gene <6193678..6399819 /locus_tag="hCG_1795626" /note="gene_id=hCG1795626.2" mRNA join(<6193678..6193887,6212813..6212973,6217895..6217996, 6269899..6270009,6282975..6283078,6341129..6341175, 6359865..6360087,6376123..6376217,6378391..6378448, 6393916..6393987,6399658..6399819) /locus_tag="hCG_1795626" /product="hCG1795626" /note="gene_id=hCG1795626.2 transcript_id=hCT1834886.2; splice donor-acceptor pairs covered / total pairs = 0/10; created on 26-AUG-2002" CDS join(6193678..6193887,6212813..6212973,6217895..6217996, 6269899..6270009,6282975..6283078,6341129..6341175, 6359865..6359963) /locus_tag="hCG_1795626" /note="gene_id=hCG1795626.2 transcript_id=hCT1834886.2 protein_id=hCP1741889.1" /codon_start=1 /product="hCG1795626" /protein_id="EAW52066.1" /translation="MRTLTIPPILRVENRDLCFLVGSYVKCCDDQIFAVAEPVVILEM RKQLDKMVLEDNCSLTKGRGTDVTVKFLAQALRHPRGSWSQTTKRKRREVRNRPTIVA NDPAKRERRSTHRTQSLIKPSRYTTPENTGMTLAQSKDYKNDSLLRYQQSQNETTRTF MVLLIEDSLIRDYHSQPYTVSSQHTQGIFVSVCERREKSSLTVQFGCLVTCSGTKSYV AYHRNNNQKNVATIGATCSKYGYKAEEWGWNVLVGPAWIICQQQVLAEGEKGYSSVPP K" gene 6848448..>6881745 /locus_tag="hCG_1649518" /note="gene_id=hCG1649518.3" mRNA join(6848448..6848661,6879265..6879503,6881485..>6881745) /locus_tag="hCG_1649518" /product="hCG1649518" /note="gene_id=hCG1649518.3 transcript_id=hCT1649645.3; splice donor-acceptor pairs covered / total pairs = 0/2; created on 05-AUG-2003" CDS join(6848451..6848661,6879265..6879503,6881485..6881745) /locus_tag="hCG_1649518" /note="gene_id=hCG1649518.3 transcript_id=hCT1649645.3 protein_id=hCP1640738.3" /codon_start=1 /product="hCG1649518" /protein_id="EAW52067.1" /translation="MAEKAFVKQNVNPGAYCSWWESKKGTVGAACNFLCLWQQSKGKK CHKHEGEEVRDLYAEPLNSLEAENHKTVFCFATLKRWKAKISTHLLEHLRIETSPFKE ETLADELLTIWMPRVLSIMGHPLCKNKEKHNFKRAEVPLREKDSPRMKILNLHTENNL QAQASLRFNGFSLPPLFVPSILEGCSKQTGNVTQKCGDIFLSCFRKMSVSQSPLVELT HSIFGESFKQFRLIQSPS" gene complement(7054811..>7111445) /locus_tag="hCG_1789441" /note="gene_id=hCG1789441.1" mRNA complement(join(7054811..7055100,7055212..7055701, 7063067..7063139,7068201..7068348,7105724..7105796, 7108500..7108644,7111344..>7111445)) /locus_tag="hCG_1789441" /product="hCG1789441" /note="gene_id=hCG1789441.1 transcript_id=hCT1828687.1; splice donor-acceptor pairs covered / total pairs = 0/6; created on 26-AUG-2002" CDS complement(join(7055439..7055701,7063067..7063139, 7068201..7068348,7105724..7105796,7108500..7108644, 7111344..7111445)) /locus_tag="hCG_1789441" /note="gene_id=hCG1789441.1 transcript_id=hCT1828687.1 protein_id=hCP1741896.1" /codon_start=1 /product="hCG1789441" /protein_id="EAW52068.1" /translation="MVAGAMRENQMLPQSHLQETPQKRGLHLTSNILTLVIPKSAAQS NFTARVPSVISLFREEKEDSNSQKAWLFKELSPTPRRRGPSVIVVTESSQKSADVIMY ATRVRDRRCSKAQSPEKTDWKQVFEETVPADKRSLRQESTAVKGKRGIVWPNLMGCYK NHMSGYMGKVFASYRIAIYKENQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHT STGRIKAAEKKEACNVESNRKKETELLGSFSKNESVPEVEALLARLRAL" gene complement(7162911..7552870) /gene="DIAPH3" /locus_tag="hCG_1981722" /note="gene_id=hCG1981722.0" /db_xref="GeneID:81624" mRNA complement(join(7162911..7163098,7163578..7163673, 7199645..7199780,7221964..7222126,7228191..7228311, 7250279..7250408,7268101..7268340,7300608..7300709, 7305028..7305122,7313647..7313742,7358816..7358930, 7359724..7360032,7363224..7363328,7369667..7369731, 7372641..7372759,7380030..7380141,7380917..7381058, 7381345..7381455,7397416..7397521,7399405..7399541, 7404785..7404854,7404943..7405017,7431563..7431693, 7482485..7482589,7500870..7501047,7552462..7552840)) /gene="DIAPH3" /locus_tag="hCG_1981722" /product="diaphanous homolog 3 (Drosophila), transcript variant hCT2254696" /note="gene_id=hCG1981722.0 transcript_id=hCT2254696.0; splice donor-acceptor pairs covered / total pairs = 24/25; created on 05-AUG-2003" /db_xref="GeneID:81624" CDS complement(join(7163019..7163098,7163578..7163673, 7199645..7199780,7221964..7222126,7228191..7228311, 7250279..7250408,7268101..7268340,7300608..7300709, 7305028..7305122,7313647..7313742,7358816..7358930, 7359724..7360032,7363224..7363328,7369667..7369731, 7372641..7372759,7380030..7380141,7380917..7381058, 7381345..7381455,7397416..7397521,7399405..7399541, 7404785..7404854,7404943..7405017,7431563..7431693, 7482485..7482589,7500870..7500935)) /gene="DIAPH3" /locus_tag="hCG_1981722" /note="gene_id=hCG1981722.0 transcript_id=hCT2254696.0 protein_id=hCP1797401.0 isoform=CRA_e" /codon_start=1 /product="diaphanous homolog 3 (Drosophila), isoform CRA_e" /protein_id="EAW52073.1" /db_xref="GeneID:81624" /translation="MMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKK EMVMQYINTASKTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSW VESFGHEGLGLLLDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEER SLSLLAKAVDPRHPNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCI VEGLRHNSVQLQVACMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDG LDIQLKVFDEHKEEDLFELSHRLEDIRAELEYPFVLKSTYDVYNMVWSTVKETRAEGY FISILQHLLLIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVD ICIDQAKLEEFEEKASELYKKFEKEFTDHQETQAELQKKEAKINELQAELQAFKSQFG ALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPV PPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISMRRLNWLKIRPHEMTENCFWIKV NENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSIKKKIKELKFLDSKIAQNLSIF LSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQEQLNSLSQFKSEYSNLCEPE QFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAVSTACEEIKKSKSFSKLLEL VLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTLLHFLVEICEEKYPDILNF VDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPPPEDLHDKFVTKIFVISA KEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTDLNNFRTTFMQAIKENIKK REAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDETGVMDNLLEALQSGAAFR DRRKRTPMPKDVRQSLSPMSQRPVLKVCNHGNKPYL" mRNA complement(join(7163378..7163673,7199645..7199780, 7221964..7222126,7228191..7228311,7250279..7250408, 7268101..7268340,7300608..7300709,7305028..7305122, 7313647..7313742,7358816..7358930,7359724..7360032, 7363224..7363328,7369667..7369731,7372641..7372759, 7380030..7380141,7380940..7381058,7381345..7381455, 7397416..7397521,7399405..7399541,7404785..7404854, 7404943..7405017,7431563..7431693,7482485..7482589, 7500870..7501046,7521823..7521855,7552462..7552870)) /gene="DIAPH3" /locus_tag="hCG_1981722" /product="diaphanous homolog 3 (Drosophila), transcript variant hCT2254694" /note="gene_id=hCG1981722.0 transcript_id=hCT2254694.0; splice donor-acceptor pairs covered / total pairs = 24/25; created on 05-AUG-2003" /db_xref="GeneID:81624" CDS complement(join(7163435..7163673,7199645..7199780, 7221964..7222126,7228191..7228311,7250279..7250408, 7268101..7268340,7300608..7300709,7305028..7305122, 7313647..7313742,7358816..7358930,7359724..7360032, 7363224..7363328,7369667..7369731,7372641..7372759, 7380030..7380141,7380940..7381039)) /gene="DIAPH3" /locus_tag="hCG_1981722" /note="gene_id=hCG1981722.0 transcript_id=hCT2254694.0 protein_id=hCP1797396.0 isoform=CRA_d" /codon_start=1 /product="diaphanous homolog 3 (Drosophila), isoform CRA_d" /protein_id="EAW52072.1" /db_xref="GeneID:81624" /translation="MMAWISNLKSLMSIKKKICLSYPIALKILELNLTYDVYNMVWST VKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRL DLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQAELQKKEAKINELQAE LQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPG MRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISMRRLNWLKIRPHEM TENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSIKKKIKELKFLDS KIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQEQLNSLSQFKS EYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAVSTACEEIKKS KSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTLLHFLVEICE EKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPPPEDLHDKF VTKIFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTDLNNFRTTFM QAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDETGVMDNLLE ALQSGAAFRDRRKRTPMPKGEPYTCFMLLSRELSQRKNPVFLILLKLCVKNAVPWATT VQKFHKFA" mRNA complement(join(7250127..7250408,7268101..7268340, 7300608..7300709,7305028..7305122,7313647..7313742, 7358816..7358930,7359724..7360032,7363224..7363328, 7369667..7369731,7372641..7372759,7380030..7380141, 7380917..7381058,7381345..7381455,7397416..7397521, 7399405..7399541,7404785..7404854,7404943..7405017, 7431563..7431693,7482485..7482589,7500870..7501047, 7552462..7552840)) /gene="DIAPH3" /locus_tag="hCG_1981722" /product="diaphanous homolog 3 (Drosophila), transcript variant hCT2254692" /note="gene_id=hCG1981722.0 transcript_id=hCT2254692.0; splice donor-acceptor pairs covered / total pairs = 19/20; created on 05-AUG-2003" /db_xref="GeneID:81624" mRNA complement(join(7250127..7250408,7268101..7268340, 7300608..7300709,7305028..7305122,7313647..7313742, 7358816..7358930,7359724..7360032,7363224..7363328, 7369667..7369731,7372641..7372759,7380030..7380141, 7380934..7381058,7381345..7381455,7397416..7397521, 7399405..7399541,7401921..7402053)) /gene="DIAPH3" /locus_tag="hCG_1981722" /product="diaphanous homolog 3 (Drosophila), transcript variant hCT2254691" /note="gene_id=hCG1981722.0 transcript_id=hCT2254691.0; splice donor-acceptor pairs covered / total pairs = 15/15; created on 05-AUG-2003" /db_xref="GeneID:81624" CDS complement(join(7250151..7250408,7268101..7268340, 7300608..7300709,7305028..7305122,7313647..7313742, 7358816..7358930,7359724..7360032,7363224..7363328, 7369667..7369731,7372641..7372759,7380030..7380141, 7380917..7381058,7381345..7381455,7397416..7397521, 7399405..7399541,7404785..7404854,7404943..7405017, 7431563..7431693,7482485..7482589,7500870..7500935)) /gene="DIAPH3" /locus_tag="hCG_1981722" /note="gene_id=hCG1981722.0 transcript_id=hCT2254692.0 protein_id=hCP1797399.0 isoform=CRA_a" /codon_start=1 /product="diaphanous homolog 3 (Drosophila), isoform CRA_a" /protein_id="EAW52069.1" /db_xref="GeneID:81624" /translation="MMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKK EMVMQYINTASKTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSW VESFGHEGLGLLLDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEER SLSLLAKAVDPRHPNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCI VEGLRHNSVQLQVACMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDG LDIQLKVFDEHKEEDLFELSHRLEDIRAELEYPFVLKSTYDVYNMVWSTVKETRAEGY FISILQHLLLIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVD ICIDQAKLEEFEEKASELYKKFEKEFTDHQETQAELQKKEAKINELQAELQAFKSQFG ALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPV PPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISMRRLNWLKIRPHEMTENCFWIKV NENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSIKKKIKELKFLDSKIAQNLSIF LSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQEQLNSLSQFKSEYSNLCEPE QFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAVSTACEEIKKSKSFSKLLEL VLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTLLHFLVEICEEKYPDILNF VDDLEPLDKASKGLCLFKKHFMALIFSAKRLKIIPFICMYFPLSHSVFIPNISF" CDS complement(join(7250151..7250408,7268101..7268340, 7300608..7300709,7305028..7305122,7313647..7313742, 7358816..7358930,7359724..7360032,7363224..7363328, 7369667..7369731,7372641..7372759,7380030..7380141, 7380934..7381039)) /gene="DIAPH3" /locus_tag="hCG_1981722" /note="gene_id=hCG1981722.0 transcript_id=hCT2254691.0 protein_id=hCP1797395.0 isoform=CRA_f" /codon_start=1 /product="diaphanous homolog 3 (Drosophila), isoform CRA_f" /protein_id="EAW52074.1" /db_xref="GeneID:81624" /translation="MMAWISNLKSLMSIKKKICLSYPIALKILELNLNIPYDVYNMVW STVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRK RLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQAELQKKEAKINELQ AELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPL PGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISMRRLNWLKIRPH EMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSIKKKIKELKFL DSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQEQLNSLSQF KSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAVSTACEEIK KSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTLLHFLVEI CEEKYPDILNFVDDLEPLDKASKGLCLFKKHFMALIFSAKRLKIIPFICMYFPLSHSV FIPNISF" mRNA complement(join(7380030..7380141,7380934..7381058, 7381345..7381455,7397416..7397521,7399405..7399541, 7404785..7404854,7404943..7405017,7431563..7431693, 7482485..7482589,7500870..7501046,7521823..7521855, 7552462..7552870)) /gene="DIAPH3" /locus_tag="hCG_1981722" /product="diaphanous homolog 3 (Drosophila), transcript variant hCT2254697" /note="gene_id=hCG1981722.0 transcript_id=hCT2254697.0; splice donor-acceptor pairs covered / total pairs = 11/11; created on 05-AUG-2003" /db_xref="GeneID:81624" CDS complement(join(7380135..7380141,7380934..7381058, 7381345..7381455,7397416..7397521,7399405..7399541, 7404785..7404854,7404943..7405017,7431563..7431693, 7482485..7482589,7500870..7501046,7521823..7521855, 7552462..7552641)) /gene="DIAPH3" /locus_tag="hCG_1981722" /note="gene_id=hCG1981722.0 transcript_id=hCT2254697.0 protein_id=hCP1797397.0 isoform=CRA_c" /codon_start=1 /product="diaphanous homolog 3 (Drosophila), isoform CRA_c" /protein_id="EAW52071.1" /db_xref="GeneID:81624" /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHP PPPSGPEEPGEKRPKFHLNIRTLTDDMLDKFASIRIPGSKKERPPLPNLKTAFASSDC SAAPLEMMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYIN TASKTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEG LGLLLDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKA VDPRHPNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNS VQLQVACMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVF DEHKEEDLFELSHRLEDIRAELEYPI" gene 7401623..>7433232 /locus_tag="hCG_1981701" /note="gene_id=hCG1981701.0" mRNA join(7401623..7401730,7409793..7409880,7431554..7431662, 7433069..>7433232) /locus_tag="hCG_1981701" /product="hCG1981701" /note="gene_id=hCG1981701.0 transcript_id=hCT2254664.0; splice donor-acceptor pairs covered / total pairs = 3/3; created on 26-AUG-2002" CDS join(7431646..7431662,7433069..>7433232) /locus_tag="hCG_1981701" /note="gene_id=hCG1981701.0 transcript_id=hCT2254664.0 protein_id=hCP1797406.0" /codon_start=1 /product="hCG1981701" /protein_id="EAW52075.1" /translation="MNEFLRFTIQRQEMNCVSSKEDQVKWYEIRCFSCFLFLLIYYNV IQNNIPNKAKQISTVK" mRNA complement(join(7464977..7465363,7482485..7482589, 7500870..7501046,7502966..7503010)) /gene="DIAPH3" /locus_tag="hCG_1981722" /product="diaphanous homolog 3 (Drosophila), transcript variant hCT2254695" /note="gene_id=hCG1981722.0 transcript_id=hCT2254695.1; splice donor-acceptor pairs covered / total pairs = 2/3; created on 05-AUG-2003" /db_xref="GeneID:81624" CDS complement(join(7465349..7465363,7482485..7482589, 7500870..7500935)) /gene="DIAPH3" /locus_tag="hCG_1981722" /note="gene_id=hCG1981722.0 transcript_id=hCT2254695.1 protein_id=hCP1797400.1 isoform=CRA_b" /codon_start=1 /product="diaphanous homolog 3 (Drosophila), isoform CRA_b" /protein_id="EAW52070.1" /db_xref="GeneID:81624" /translation="MMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKK EMVMQYINTASKTKPRG" gene <7532675..>7552861 /locus_tag="hCG_1821223" /note="gene_id=hCG1821223.1" mRNA join(<7532675..7532784,7542269..7542358,7542821..7542913, 7552654..>7552861) /locus_tag="hCG_1821223" /product="hCG1821223" /note="gene_id=hCG1821223.1 transcript_id=hCT1971870.1; splice donor-acceptor pairs covered / total pairs = 0/3; created on 26-AUG-2002" CDS join(7532675..7532784,7542269..7542358,7542821..7542913, 7552654..>7552861) /locus_tag="hCG_1821223" /note="gene_id=hCG1821223.1 transcript_id=hCT1971870.1 protein_id=hCP1784313.1" /codon_start=1 /product="hCG1821223" /protein_id="EAW52076.1" /translation="MGVEKSMQWQFPNAIPRASMLPGPQETHSQMDESDVRFITVHYF IYILKPTPMKKIMVSDDRPLLTVHKEQAPKKASETCSDHSVIRSELCINPNVTCSGDR KEGGHSASRKLEAEGSTTGFTPGVRHPNSQHSLAQPLKSGPQPTHLKTPATRVGPGLA NPAPPDQ" gene 7663605..>7712498 /locus_tag="hCG_1744641" /note="gene_id=hCG1744641.1" mRNA 7663605..7665035 /locus_tag="hCG_1744641" /product="hCG1744641, transcript variant hCT1782869" /note="gene_id=hCG1744641.1 transcript_id=hCT1782869.0; overlap evidence=yes; created on 26-AUG-2002" mRNA join(7663725..7664237,7664295..7664561,7673145..7673213, 7674761..7674841,7678736..7678879,7709028..7709228, 7712433..>7712498) /locus_tag="hCG_1744641" /product="hCG1744641, transcript variant hCT2254671" /note="gene_id=hCG1744641.1 transcript_id=hCT2254671.0; splice donor-acceptor pairs covered / total pairs = 0/6; created on 26-AUG-2002" CDS join(7663914..7664237,7664295..7664561,7673145..7673213, 7674761..7674841,7678736..7678879,7709028..7709228, 7712433..>7712498) /locus_tag="hCG_1744641" /note="gene_id=hCG1744641.1 transcript_id=hCT2254671.0 protein_id=hCP1797423.0 isoform=CRA_b" /codon_start=1 /product="hCG1744641, isoform CRA_b" /protein_id="EAW52078.1" /translation="MDEIDASSAVKVKRAVQKTSDLVVLGRTWKTTEQDLKEYFSTFG DVLMVQVKKDTKTGHSKRFGFVCFTEDETQVKVMSQLHMIDGRWCDCKLPNSKQSPDK PLRSMKYGEVVDVVILKPFRTFAFVTFADDQVAQSFCGEDLIIKGISIHISNAEPKHN SNRQKEVEDLVVIQVALGIRVNVVIVEGVELFWETIKINNFGKLDEFSTGFKSKALQN FRVFLMSLVEQWLWNKRKLPGQAAFMRDQRQGSMPLLLFAFSIKAIMAYTVAGDDCSR EFALMSHPSICVSLLEKVQHQGRRWHQVHETVDPESREVDSTKPGGQPGVSLGRAGAE ARKSRSHTRAPTSGGLRPLTRGRGWGESHLESLPEDAIMELNLLTGIPIV" CDS 7663914..7664249 /locus_tag="hCG_1744641" /note="gene_id=hCG1744641.1 transcript_id=hCT1782869.0 protein_id=hCP1741939.1 isoform=CRA_a" /codon_start=1 /product="hCG1744641, isoform CRA_a" /protein_id="EAW52077.1" /translation="MDEIDASSAVKVKRAVQKTSDLVVLGRTWKTTEQDLKEYFSTFG DVLMVQVKKDTKTGHSKRFGFVCFTEDETQVKVMSQLHMIDGRWCDCKLPNSKQSPDK PLRSMKVGR" gap 7696608..7696627 /estimated_length=20 gene 7786306..7963698 /gene="TDRD3" /locus_tag="hCG_32165" /note="gene_id=hCG32165.4" /db_xref="GeneID:81550" mRNA join(7786306..7786849,7829529..7829613,7834524..7834589, 7850221..7850381,7857079..7857220,7873615..7873686, 7875639..7875788,7884276..7884416,7899576..7899732, 7900443..7900568,7918180..7919030,7924921..7925046, 7957342..7957467,7963433..7963698) /gene="TDRD3" /locus_tag="hCG_32165" /product="tudor domain containing 3, transcript variant hCT1968180" /note="gene_id=hCG32165.4 transcript_id=hCT1968180.1; splice donor-acceptor pairs covered / total pairs = 13/13; created on 26-AUG-2002" /db_xref="GeneID:81550" mRNA join(7786306..7786849,7829529..7829613,7834528..7834589, 7850221..7850381,7857079..7857220,7873615..7873686, 7875639..7875788,7884276..7884416,7899576..7899732, 7900443..7900568,7918180..7919030,7924921..7925046, 7957342..7957467,7963430..7963698) /gene="TDRD3" /locus_tag="hCG_32165" /product="tudor domain containing 3, transcript variant hCT1968182" /note="gene_id=hCG32165.4 transcript_id=hCT1968182.1; splice donor-acceptor pairs covered / total pairs = 13/13; created on 26-AUG-2002" /db_xref="GeneID:81550" mRNA join(7786306..7786849,7829529..7829613,7834528..7834589, 7850221..7850381,7857079..7857220,7873615..7873686, 7875639..7875788,7884276..7884416,7899576..7899732, 7900443..7900568,7918180..7919030,7924921..7925046, 7957342..7957467,7963433..7963698) /gene="TDRD3" /locus_tag="hCG_32165" /product="tudor domain containing 3, transcript variant hCT1968181" /note="gene_id=hCG32165.4 transcript_id=hCT1968181.1; splice donor-acceptor pairs covered / total pairs = 13/13; created on 26-AUG-2002" /db_xref="GeneID:81550" mRNA join(7788165..7788469,7792555..7792652,7829529..7829613, 7834524..7834589,7850221..7850381,7857079..7857220, 7873615..7873686,7875639..7875788,7884276..7884416, 7899576..7899732,7900443..7900568,7918180..7919030, 7924921..7925046,7957342..7957467,7963433..7963698) /gene="TDRD3" /locus_tag="hCG_32165" /product="tudor domain containing 3, transcript variant hCT1968183" /note="gene_id=hCG32165.4 transcript_id=hCT1968183.1; splice donor-acceptor pairs covered / total pairs = 14/14; created on 26-AUG-2002" /db_xref="GeneID:81550" CDS join(7792591..7792652,7829529..7829613,7834524..7834589, 7850221..7850381,7857079..7857220,7873615..7873686, 7875639..7875788,7884276..7884416,7899576..7899732, 7900443..7900568,7918180..7919030,7924921..7925046, 7957342..7957458) /gene="TDRD3" /locus_tag="hCG_32165" /note="gene_id=hCG32165.4 transcript_id=hCT1968183.1 protein_id=hCP1782534.1 isoform=CRA_b" /codon_start=1 /product="tudor domain containing 3, isoform CRA_b" /protein_id="EAW52081.1" /db_xref="GeneID:81550" /translation="MARSWFVATSTSQVLLPQPPKYLSDEGIEACTSSPDKVNVNDII LIALNTDLRTIGKKFLPSDINSGKVEKLEGPCVLQIQKIRNVAAPKDNEESQAAPRML RLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNGFLLLNDSNTTVLGGE VEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHVQVDSRELDRRKTLQVT MPVKPTNDNDEFEKQRTAAIAEVAKSKETKTFGGGGGGARSNLNMNAAGNRNREVLQK EKSTKSEGKHEGVYRELVDEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLTSN KQKPVMGPPLRGRGKGRGRIRSEDEEDLGNARPSAPSTLFDFLESKMGTLNVEEPKSQ PQQLHQGQYRSSNTEQNGVKDNNHLRHPPRNDTRQPRNEKPPRFQRDSQNSKSVLEGS GLPRNRGSERPSTSSVSEVWAEDRIKCDRPYSRYDRTKDTSYPLGSQHSDGAFKKRDN SMQSRSGKGPSFAEAKENPLPQGSVDYNNQKRGKRESQTSIPDYFYDRKSQTINNEAF SGIKIEKHFNVNTDYQNPVRSNSFIGVPNGEVEMPLKGRRIGPIKPAGPVTAVPCDDK IFYNSGPKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALYWEDNKFYRAEVEALHS SGMTAVVKFIDYGNYEEVLLSNIKPIQTEAWEEEGTYDQTLEFRRGGDGQPRRSTRPT QQFYQPPRARN" CDS join(7850308..7850381,7857079..7857220,7873615..7873686, 7875639..7875788,7884276..7884416,7899576..7899732, 7900443..7900568,7918180..7919030,7924921..7925046, 7957342..7957458) /gene="TDRD3" /locus_tag="hCG_32165" /note="gene_id=hCG32165.4 transcript_id=hCT1968181.1 protein_id=hCP1782531.0 isoform=CRA_a" /codon_start=1 /product="tudor domain containing 3, isoform CRA_a" /protein_id="EAW52079.1" /db_xref="GeneID:81550" /translation="MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKN GFLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHV QVDSRELDRRKTLQVTMPVKPTNDNDEFEKQRTAAIAEVAKSKETKTFGGGGGGARSN LNMNAAGNRNREVLQKEKSTKSEGKHEGVYRELVDEKALKHITEMGFSKEASRQALMD NGNNLEAALNVLLTSNKQKPVMGPPLRGRGKGRGRIRSEDEEDLGNARPSAPSTLFDF LESKMGTLNVEEPKSQPQQLHQGQYRSSNTEQNGVKDNNHLRHPPRNDTRQPRNEKPP RFQRDSQNSKSVLEGSGLPRNRGSERPSTSSVSEVWAEDRIKCDRPYSRYDRTKDTSY PLGSQHSDGAFKKRDNSMQSRSGKGPSFAEAKENPLPQGSVDYNNQKRGKRESQTSIP DYFYDRKSQTINNEAFSGIKIEKHFNVNTDYQNPVRSNSFIGVPNGEVEMPLKGRRIG PIKPAGPVTAVPCDDKIFYNSGPKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALY WEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQTEAWEEEGTYDQTLE FRRGGDGQPRRSTRPTQQFYQPPRARN" CDS join(7850308..7850381,7857079..7857220,7873615..7873686, 7875639..7875788,7884276..7884416,7899576..7899732, 7900443..7900568,7918180..7919030,7924921..7925046, 7957342..7957458) /gene="TDRD3" /locus_tag="hCG_32165" /note="gene_id=hCG32165.4 transcript_id=hCT1968182.1 protein_id=hCP1782533.0 isoform=CRA_a" /codon_start=1 /product="tudor domain containing 3, isoform CRA_a" /protein_id="EAW52080.1" /db_xref="GeneID:81550" /translation="MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKN GFLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHV QVDSRELDRRKTLQVTMPVKPTNDNDEFEKQRTAAIAEVAKSKETKTFGGGGGGARSN LNMNAAGNRNREVLQKEKSTKSEGKHEGVYRELVDEKALKHITEMGFSKEASRQALMD NGNNLEAALNVLLTSNKQKPVMGPPLRGRGKGRGRIRSEDEEDLGNARPSAPSTLFDF LESKMGTLNVEEPKSQPQQLHQGQYRSSNTEQNGVKDNNHLRHPPRNDTRQPRNEKPP RFQRDSQNSKSVLEGSGLPRNRGSERPSTSSVSEVWAEDRIKCDRPYSRYDRTKDTSY PLGSQHSDGAFKKRDNSMQSRSGKGPSFAEAKENPLPQGSVDYNNQKRGKRESQTSIP DYFYDRKSQTINNEAFSGIKIEKHFNVNTDYQNPVRSNSFIGVPNGEVEMPLKGRRIG PIKPAGPVTAVPCDDKIFYNSGPKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALY WEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQTEAWEEEGTYDQTLE FRRGGDGQPRRSTRPTQQFYQPPRARN" CDS join(7850308..7850381,7857079..7857220,7873615..7873686, 7875639..7875788,7884276..7884416,7899576..7899732, 7900443..7900568,7918180..7919030,7924921..7925046, 7957342..7957458) /gene="TDRD3" /locus_tag="hCG_32165" /note="gene_id=hCG32165.4 transcript_id=hCT1968180.1 protein_id=hCP1782529.0 isoform=CRA_a" /codon_start=1 /product="tudor domain containing 3, isoform CRA_a" /protein_id="EAW52082.1" /db_xref="GeneID:81550" /translation="MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKN GFLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHV QVDSRELDRRKTLQVTMPVKPTNDNDEFEKQRTAAIAEVAKSKETKTFGGGGGGARSN LNMNAAGNRNREVLQKEKSTKSEGKHEGVYRELVDEKALKHITEMGFSKEASRQALMD NGNNLEAALNVLLTSNKQKPVMGPPLRGRGKGRGRIRSEDEEDLGNARPSAPSTLFDF LESKMGTLNVEEPKSQPQQLHQGQYRSSNTEQNGVKDNNHLRHPPRNDTRQPRNEKPP RFQRDSQNSKSVLEGSGLPRNRGSERPSTSSVSEVWAEDRIKCDRPYSRYDRTKDTSY PLGSQHSDGAFKKRDNSMQSRSGKGPSFAEAKENPLPQGSVDYNNQKRGKRESQTSIP DYFYDRKSQTINNEAFSGIKIEKHFNVNTDYQNPVRSNSFIGVPNGEVEMPLKGRRIG PIKPAGPVTAVPCDDKIFYNSGPKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALY WEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQTEAWEEEGTYDQTLE FRRGGDGQPRRSTRPTQQFYQPPRARN" gene complement(<8026692..>8027900) /locus_tag="hCG_28210" /note="gene_id=hCG28210.3" mRNA complement(join(<8026692..8026851,8026938..8027060, 8027728..>8027900)) /locus_tag="hCG_28210" /product="hCG28210" /note="gene_id=hCG28210.3 transcript_id=hCT19358.3; splice donor-acceptor pairs covered / total pairs = 0/2; created on 26-AUG-2002" CDS complement(join(<8026692..8026851,8026938..8027060, 8027728..8027900)) /locus_tag="hCG_28210" /note="gene_id=hCG28210.3 transcript_id=hCT19358.3 protein_id=hCP43700.2" /codon_start=1 /product="hCG28210" /protein_id="EAW52083.1" /translation="MSVSQDSRDHGPDGMEPGDVIESNWNEVDDSFDDMNLSESLLHG MYIYSSEKPSVIQQKVDWLTAKMHARDFTVSAMHGDMDQKERDVIRRSFILALAEQNY IHRISRGRWFDLKDADINMVTEEDKRTLRDIRTFYNTSIEEMPLDVADLI" gene 8062752..8085600 /locus_tag="hCG_2045010" /note="gene_id=hCG2045010.0" mRNA join(8062752..8062841,8075000..8075151,8080572..8080663, 8084250..8084324,8085573..8085600) /locus_tag="hCG_2045010" /product="hCG2045010" /note="gene_id=hCG2045010.0 transcript_id=hCT2359845.0; splice donor-acceptor pairs covered / total pairs = 4/4; created on 16-AUG-2004" gene <8306800..8331572 /locus_tag="hCG_2038264" /note="gene_id=hCG2038264.0" mRNA join(<8306800..8307037,8330211..8331572) /locus_tag="hCG_2038264" /product="hCG2038264" /note="gene_id=hCG2038264.0 transcript_id=hCT2342690.0; splice donor-acceptor pairs covered / total pairs = 1/1; created on 07-APR-2003" CDS <8331112..8331354 /locus_tag="hCG_2038264" /note="gene_id=hCG2038264.0 transcript_id=hCT2342690.0 protein_id=hCP1908361.0" /codon_start=1 /product="hCG2038264" /protein_id="EAW52084.1" /translation="WFGNYHIASLKVISCQPVPGKGHFLMIYTCCTKVLIECRCQWGA NFWACTLRDKMAEYDLPGTLHQKREEKPQMGMCTTS" gap 8550542..8550561 /estimated_length=20 gene complement(8800423..8805898) /gene="PCDH20" /locus_tag="hCG_1643344" /note="gene_id=hCG1643344.2" /db_xref="GeneID:64881" mRNA complement(join(8800423..8804705,8805766..8805898)) /gene="PCDH20" /locus_tag="hCG_1643344" /product="protocadherin 20" /note="gene_id=hCG1643344.2 transcript_id=hCT1643471.3; splice donor-acceptor pairs covered / total pairs = 1/1; created on 26-AUG-2002" /db_xref="GeneID:64881" CDS complement(join(8801982..8804705,8805766..8805897)) /gene="PCDH20" /locus_tag="hCG_1643344" /note="gene_id=hCG1643344.2 transcript_id=hCT1643471.3 protein_id=hCP1617894.3" /codon_start=1 /product="protocadherin 20" /protein_id="EAW52085.1" /db_xref="GeneID:64881" /translation="MRGRGNARSSQALGVSWCPATWHPRLDMGRLHRPRSSTSYRNLP HLFLFFLFVGPFSCLGSYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRSAGRPDPQ SQLPERTGAEWNPPLSFSLASRGLSGQYVTLDNRSGELHTSAQEIDREALCVEGGGGT AWSGSVSISSSPSDSCLLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWV PENAPVNTRLAIEHPAVDPDVGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMG ALDRETQDQYVSIIIAEDGGSPPLLGSATLTIGISDINDNCPLFTDSQINVTVYGNAT VGTPIAAVQAVDKDLGTNAQITYSYSQKVPQASKDLFHLDENTGVIKLFSKIGGSVLE SHKLTILANGPGCIPAVITALVSIIKVIFRPPEIVPRYIANEIDGVVYLKELEPVNTP IAFFTIRDPEGKYKVNCYLDGEGPFRLSPYKPYNNEYLLETTKPMDYELQQFYEVAVV AWNSEGFHVKRVIKVQLLDDNDNAPIFLQPLIELTIEENNSPNAFLTKLYATDADSEE RGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDREEKEKYRYTVRAVDCGKPPRESVAT VALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVISVTDADAGRNGWVALSVVNQS DIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEPALSSTAKITILLLDINDNPP LVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRID PKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESL LRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLGSITLVTGMGIYICLR KGEKHPREDENLEVQIPLKGKIDLHMRERKPMDISNI" gene complement(8815429..>8818685) /locus_tag="hCG_2038262" /note="gene_id=hCG2038262.0" mRNA complement(join(8815429..8815725,8818232..>8818685)) /locus_tag="hCG_2038262" /product="hCG2038262" /note="gene_id=hCG2038262.0 transcript_id=hCT2342688.0; splice donor-acceptor pairs covered / total pairs = 1/1; created on 07-APR-2003" CDS complement(join(8815490..8815725,8818232..>8818280)) /locus_tag="hCG_2038262" /note="gene_id=hCG2038262.0 transcript_id=hCT2342688.0 protein_id=hCP1908359.0" /codon_start=1 /product="hCG2038262" /protein_id="EAW52086.1" /translation="ALYGNTFYLICMTSEKETYQLLKPKEEHPRGSMHGSTKRHGGNQ SQMAVGIPSPLAEYFEASACCEETFHSFYSLIHLVLLWLLTAIYLQKKAQ" gap 9152698..9152717 /estimated_length=20 gene complement(9394723..>9420746) /locus_tag="hCG_2038774" /note="gene_id=hCG2038774.0" mRNA complement(join(9394723..9395707,9420454..>9420746)) /locus_tag="hCG_2038774" /product="hCG2038774" /note="gene_id=hCG2038774.0 transcript_id=hCT2343200.0; splice donor-acceptor pairs covered / total pairs = 1/1; created on 07-APR-2003" CDS complement(join(9395419..9395707,9420454..>9420467)) /locus_tag="hCG_2038774" /note="gene_id=hCG2038774.0 transcript_id=hCT2343200.0 protein_id=hCP1908358.0" /codon_start=1 /product="hCG2038774" /protein_id="EAW52087.1" /translation="PCDLWTAYVVQWRQPSHSNGHLWDIRDQEVLRDDLHKMLSLCGC RTTNRRRWIFTCSGGGLWLSSLEDWSLSQVNSGSIKGAAQFSKSEPEQDERGNPQR" gene complement(<9797348..9941730) /locus_tag="hCG_1641497" /note="gene_id=hCG1641497.3" mRNA complement(join(<9797348..9797502,9816078..9816159, 9843010..9843065,9897280..9897447,9941661..9941730)) /locus_tag="hCG_1641497" /product="hCG1641497" /note="gene_id=hCG1641497.3 transcript_id=hCT1641624.3; splice donor-acceptor pairs covered / total pairs = 0/4; created on 26-AUG-2002" CDS complement(join(<9797348..9797502,9816078..9816159, 9843010..9843065,9897280..9897447,9941661..9941721)) /locus_tag="hCG_1641497" /note="gene_id=hCG1641497.3 transcript_id=hCT1641624.3 protein_id=hCP1617906.2" /codon_start=1 /product="hCG1641497" /protein_id="EAW52088.1" /translation="MLIFIKVFAQNSRGEGKIQKEGKDDIGIGQPVENLSKSLGPPPD LHQEGCLILQLFICAVTMQKKTPIEGKVMSWFEFYKLLVFKSVVNETERVQVRTAVVH NPHTLAHMVKVWNQADSKQQGTDSWLLQPLSQMQSMGLSDEGGCLIRLLDTRNYHIRA ALDIIQYSKNPVPL" gene complement(10063597..10123487) /locus_tag="hCG_2045011" /note="gene_id=hCG2045011.0" mRNA complement(join(10063597..10063743,10077294..10077383, 10091902..10091983,10123401..10123487)) /locus_tag="hCG_2045011" /product="hCG2045011" /note="gene_id=hCG2045011.0 transcript_id=hCT2359846.0; splice donor-acceptor pairs covered / total pairs = 3/3; created on 16-AUG-2004" CDS complement(join(10077362..10077383,10091902..10091983, 10123401..10123434)) /locus_tag="hCG_2045011" /note="gene_id=hCG2045011.0 transcript_id=hCT2359846.0 protein_id=hCP1925076.0" /codon_start=1 /product="hCG2045011" /protein_id="EAW52089.1" /translation="MDPEDRHIKEYGEMSKFLPKQCCSVRSRQFVWRSRGPARLQLMI L" gap 10766759..10768420 /estimated_length=1662 CONTIG join(AADB02015976.1:1..745503,gap(20),AADB02015977.1:1..2039365, gap(20),AADB02015978.1:1..3117336,gap(20), complement(AADB02015979.1:1..12966),gap(1076), AADB02015980.1:1..1780301,gap(20),AADB02015981.1:1..853914,gap(20), AADB02015982.1:1..602136,gap(20),AADB02015983.1:1..1614041, gap(1662),AADB02015984.1:1..343173) //