LOCUS BT003869 1376 bp mRNA linear PLN 14-FEB-2003 DEFINITION Arabidopsis thaliana clone RAFL15-38-D07 (R20878) putative ribosomal protein (At1g61580) mRNA, complete cds. ACCESSION BT003869 VERSION BT003869.1 KEYWORDS FLI_CDNA. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 1376) AUTHORS Yamada,K., Chan,M.M., Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C., Toriumi,M., Wong,C., Wu,H.C., Yu,G., Yuan,S., Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J., Jones,T., Kamiya,A., Kawai,J., Kim,C.J., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T., Satou,M., Seki,M., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Shinozaki,K., Davis,R.W., Ecker,J.R. and Theologis,A. TITLE Arabidopsis Full Length cDNA Clones JOURNAL Unpublished REFERENCE 2 (bases 1 to 1376) AUTHORS Yamada,K., Chan,M.M., Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C., Yu,G., Yuan,S., Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J., Jones,T., Kamiya,A., Kawai,J., Kim,C.J., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T., Satou,M., Seki,M., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Shinozaki,K., Davis,R.W., Ecker,J.R. and Theologis,A. TITLE Direct Submission JOURNAL Submitted (14-FEB-2003) Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA COMMENT RIKEN Genomic Sciences Center (GSC) members carried out the collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., Hayashizaki,Y. and Shinozaki,K. The Salk, Stanford, PGEC (SSP) Consortium members carried out the sequencing and annotation of the RAFL cDNAs: Yamada,K., Chan,M.M., Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C., Yu,G., Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., Nguyen,M., Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Davis,R.W., Ecker,J.R. and Theologis,A. Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) contributed equally to this work as PIs. Annotation based on July 2002 version of the Arabidopsis genome submitted to Genbank. FEATURES Location/Qualifiers source 1..1376 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="1" /clone="RAFL15-38-D07 (R20878)" /ecotype="Columbia" /note="This clone is in a modified pBluescript vector2 (lambda PS) as a BamHI/XhoI insert." gene 1..1376 /gene="At1g61580" 5'UTR 1..44 /gene="At1g61580" misc_difference 1..6 /gene="At1g61580" /note="not present in genomic sequence" CDS 45..1217 /gene="At1g61580" /experiment="experimental evidence, no additional details recorded" /codon_start=1 /product="putative ribosomal protein" /protein_id="AAO41918.1" /translation="MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLT SFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSL CTVWAQHLSEELRRRFYKNWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVI RVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMI DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYH HRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVG PKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYGRTIKA" misc_difference 305 /gene="At1g61580" /note="compared to genomic sequence" /replace="t" 3'UTR 1218..1376 /gene="At1g61580" BASE COUNT 435 a 243 c 336 g 362 t ORIGIN 1 tcaatgaaac attaatatct ctactcatat cgccgactta aagaatgtct cacagaaagt 61 ttgagcatcc aagacatggt tctttgggtt tccttccaag gaaaagagct agccgacacc 121 gtgggaaagt gaaggccttc cctaaggatg atccaactaa gccttgcaga ctcacctcct 181 tcttgggata caaagctggg atgactcaca ttgtgagaga tgttgaaaaa cctggatcaa 241 aactacacaa gaaggaaaca tgtgaagctg tgacgatcat tgagacacct ccaatggtgg 301 ttgtaggtgt ggttggttat gtaaagacac ctcgtggtct gcggtctcta tgcactgtgt 361 gggctcagca tctgagcgaa gaattgagaa ggaggttcta caagaactgg gccaagtcaa 421 agaagaaggc tttcactaga tattctaaga aacatgaaac tgaagaaggg aaaaaagata 481 ttcaaagtca attggagaag atgaagaagt actgctctgt catcagagtt cttgctcaca 541 ctcagataag gaaaatgaaa gggctgaagc agaagaaggc acatctgaat gagattcaga 601 tcaatggtgg agatatagca aagaaagttg actatgcctg cagtttattt gaaaaacaag 661 tcccagttga tgccatcttc cagaaagatg aaatgattga tatcattggt gtcaccaaag 721 gaaaaggtta tgaaggtgtg gttacaagat ggggagtgac ccgacttcca agaaagactc 781 atcgtggtct tcgcaaggtt gcttgtatcg gtgcttggca tccagctaga gtctcctaca 841 cggtggctag agctggacaa aacggttacc atcaccgtac tgaaatgaac aagaaggtat 901 accgggttgg gaaagttggc caggagactc actcagccat gaccgagtat gacagaaccg 961 agaaggatat cacaccaatg ggaggatttc cccactatgg gatagtgaag gaagattatt 1021 tgatgatcaa gggatgttgc gtggggccta agaaacgtgt ggtgacttta agacagactt 1081 tgcttaagca gacgtctagg cttgctatgg aggagatcaa gcttaagttc attgacgctg 1141 cttccaatgg gggacacggt cgtttccaga cttctcaaga gaaggccaag ttctatggta 1201 gaaccatcaa agcttagatt tctaagtatt ttgttgtttt ttgagtttct ttctttggtg 1261 tttgtcggat ttttcttgac agttgatatc aactatcttc tctttttttt cttctggata 1321 ttatcaaagt ttctttggtt taagattaga aaaaaaaaaa aaaaaaaaaa aaaaaa //