LOCUS BMBL01000001 5000 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_1. ACCESSION BMBL01000001 BMBL01000000 VERSION BMBL01000001.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_1" assembly_gap 266..359 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4135..4217 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1565 a 1022 c 987 g 1249 t ORIGIN 1 gtgcccagct accaccaaca aacgtcctga cagggaacac aatggagggt ccctgatgta 61 gcagtagaac gatgggatgc agaactcaaa ttctagtaag aagaccagac ttaatggtct 121 gactgagact ggaggcaccc cagagagcat ggcctctgga ctctctatca gcctagaact 181 aaaacaattt ccgagaccaa ctcttcagac acggattgga ctggactgtg ggacacaaag 241 tgatactcgt gaagagtgtg cctctnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt 361 agggtctcat aacaatgtat gtaaaaattt ttgtatggaa gactaacttg taaacttcat 421 ttaattacaa taaaaaaact aaaaaaaaaa ttcttcccaa ttctacatga tgaacatatt 481 taatgccact gaattgtact tgtgaagatt gctgaaatgg ccaatgtatt gtcacctacg 541 tatttaccac aacaaagaca tacataataa taataataaa aaccctatgg atcccaacag 601 aacatcgtct gatatagtgc tggaagatga gtcccctagg ttggaagaca ttcaaaatac 661 agtggccaca acaatggact caagcatacc aatgatcatg aagatggagc aggagtgagc 721 catgttttgt tctgttttcc atggggttgc catgagtcgg agctgactca atggcaacta 781 acaacagcat aataacaaaa gagggcaaag ggagagacaa ggaaagacaa agtttgaaca 841 gagggcaagg tcccatgacc aatgaaactg atattacact ggctttgaaa attattccaa 901 gagggaattc agaaggaaaa ggttttcatc atttttatgg aacacttagg aacatgacct 961 taattagtcc tcataactcc atagagcaga tattctgttc ccatcttaca gagagtttat 1021 ataacctgct ccaggccacc agagtggtat atggtagagt aataattcca actcaagtat 1081 gcatgagtcc atgctcctta tattataact tactgactcc caaaagtagt gctaaatgtt 1141 ttcagtcaag gttgttattg ttacttgcca tcgagttggc tccaactcat ggctacctta 1201 catcccacag aatactgccc agtcctgtgc catcttcatg actgttgcta tgtttcagtc 1261 cattgttgca gttactgtgt cgatccatct cattaaaggc ttccctcgat tttgctgacc 1321 ctttacttta ccaaacacga tgtcctgctt tagctactgg ttctttcctg acagcatgcc 1381 caacataagt gacataaaat cctgccatcc tttcatctat ggaacgttct ggctgtgttt 1441 cttccaagac tgatttgttt gttcttctgt cagtccacgc tatatttaat attctttgtc 1501 aacacggcaa ttcaaatgca tcaattcttc atctatcttc cttttttttt tttgtccggc 1561 tttcacatgc atattaggtg atggagaaga ccatcacctc cagtgatact tgctctgtag 1621 gacggctctt actttagtgc tttgatgacc atctgctaca agaaatgtga cccctcttga 1681 ccactagtga tgaactggcc aactggactg agtaggtgga gagctggtct ttccttattt 1741 ttttgcatgt gctcctgagg ctgagggtta ggacaaagga gctggggatg gaaggaagca 1801 gtcagtgaag gcctcaggaa gtgagaccac tgcctgcctt cctgaggtgc aaggaatgac 1861 gaagcaagtc ggaactggct cacagacagc agcagtcatc tatttctgtg taataaatta 1921 tcccaaaact tggaggcaaa cacaaaaaac agatggggaa tctgagcgcg gctgagctgg 1981 cccttgggct caggcttcct tatcaaggat ggaattaagg taccagccag ggccacagtc 2041 agctccagga cccagctccc acgttcatgc acgtagccat tggcaggctt cacgtcctcg 2101 cgcgatgctg gcagagacat cagttccttg ccgtgtggac ctctccacag gcaactcaca 2161 cacagcagct ggcctctcag aatgagcaag agagtgagag agggcagcaa gtcaactgtg 2221 cctgatattc aaaaaatgga tcacggaatg tcaatgcaag ttccaaatgg gtttaaactg 2281 tggtggcacc atccacataa atgcttaggc agcccaaagt ggaacctgga agtagaaaat 2341 gtacattcac cttggggttt ctggcatggt gttcataaaa tgacctcatc tcccttctgg 2401 cataaccttt tgcataaaac aaaaaatcag taggctctct tgcctctaca tgtaactgtc 2461 ttgtgaaaga agaaattaag tataattgtc aaagtgatag aatctaaaag atctaataga 2521 atttcatggt ttagagaagt ggtttttaac ctttttggac caggggcata gaagaaagct 2581 gatgaaattt acagaccctt ccccagaaaa atgcatttat gtccacacat ctacagctaa 2641 tctaactcta acaacaatga ggtaattgat atgagttgtg ccttactgaa gagaaaattg 2701 aggctcagag aaattaagtc atttgtacaa agtcaaacaa cataaaatgg tagcctaagg 2761 acataaactc agatctttct acctccaaaa cccatgatca agaaaacaca gggatatgcc 2821 agggccttgt aagcaagaag aaacagggaa aatcttttat tacatgagtg gatcttttat 2881 cacatgttca aaaaaaaaaa aaaaaaaaag ctcctctgca tcagtggcgg agttcctggg 2941 tggtgcaaac agttaatatg ttcagttgct aaccaaaagg ttggaggttc aagtccaccc 3001 agaggtacct cagaagaaag gcctagtgat ctacttccaa aaaatcagcc actgaaaaca 3061 ctatagagca gagcacaatt ctactctgac aacacatggg gtggtgatga atcggagtcc 3121 agtcgacggc aactggttac tagttatctg tgacaccagt gaaatatgat tcccaatgat 3181 gaccagttgg gcaaccctgg agtctactct ggactccttt ctgaaactga ttcaaatcta 3241 ggagagatca aaagaaatat atagaaaaca taacattatt atgttgttca caggtaccat 3301 cgagtcaatt tctgctcaca gcgactccat gtgatagagt agaaatgccc cacaggattt 3361 cctaggctat aatctttatg tgaacagact gtcagatttt tctcccatgg agctgctgga 3421 tgagtctgaa ccacctacct tttggttaag aagcctgact ggcatggtgg ttaagcacta 3481 ggctgttaag tgaaaggtca gtggttcgaa tccaccaagc cgctctacag gagaaagatg 3541 tggcagtctg cttctgtaaa gattacagcc ttggaaaccc tacagggcag ttctactctg 3601 tcctataggg tcgctgtgag tcggaatcga cttgacagca acgggtacct tttttggtta 3661 gcagtcaaat gcttaatcgc tacaccacca gggctcctta agatgattat agaggcgcca 3721 aatcaacata gagatcaccc ccttttctca tatgaagatt caaacttttt tacataaaat 3781 gttgctacaa caaatgggat gtctgcatgg ggtaaaaatg aatcctgatc cttacttcac 3841 atcaaacaca aattaactca aaacacacca ccgtactgtc aacagttcgt acacataaac 3901 agagagaaaa aacattagga aattggatta ggtaagaatt tcttaatcag gacacaaaag 3961 tacaactatt taaaaacata taaagtagac atcatcacga ttaaaaactt ttgctctttg 4021 aaagacacag ttaagaaaat gaaaaggcaa ttgacagagt gagaaaaaat tttctgaaac 4081 ttacaatctg actggtatcc agaatatata gataattctt gtactcagta atgannnnnn 4141 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4201 nnnnnnnnnn nnnnnnncag ggaaatcaaa atcaaaatcc ctacatacct atcggagtgc 4261 ttgggtggtg caaacactta acacgttcag ttgctatctg aaaggctgga agatctagtc 4321 caacccagac gtacacagga agaaaggcct ggtggtctac ttctagaaaa tcagttactg 4381 aaaaccctat ggagtacagt tctacaatga cacacgtggg gtctccatga gttagagcca 4441 acttgacagc aactgttttt tttacatacc taccagaatt gctgaagtta ataaaaccga 4501 ctgtaacaag cactggtgaa aatgtgaagc aagtggaacc ctcataaact gctggtggga 4561 atgtaaaaat agttcttaaa atgttaaaca cacacttatc acaagactaa acaattccac 4621 tcccaggtat ctccctaaga gaaatcagaa catatgctga cacaaacacc tatactcaat 4681 gtgttagtag ctgtagtgat catcaccaac aactgggaac aagccaaatg tcactcaacc 4741 ggtgaatgga tacacaaagg gtggtagatt tatacaatca aatactactc agggacaaac 4801 aggaagaact actggcccag acaacaacac aacaaacctc caaagcatta tgctaagaga 4861 gagaagccag acacaaaaga ctcatttacc ggtacgcgac attttggaaa aggcaaaact 4921 atacatacaa ggcccctgtg cttggtttaa taattcacca tgatcaactg tgatttatac 4981 caggtatgca tggatagttc // LOCUS BMBL01000002 5000 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_2. ACCESSION BMBL01000002 BMBL01000000 VERSION BMBL01000002.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_2" BASE COUNT 1563 a 1141 c 914 g 1382 t ORIGIN 1 cacaagctag acatttccat tacatatggg agaaactaga ggaaaagaag tgataacagg 61 caccaagcaa gtcagcagaa cacattacat tagccctcaa ggctttgaaa ataatcctct 121 gttctctgag acaatttaca cagtggccct gccctccaga ctgtaggtat tggccacagt 181 ctccggatcc tgagtggagt cccctcgggc ctgggcttca gctctgcctt ccaggcccac 241 tgggatggca actctgctcc cttggcttta ggcgaaacat tctcctagtc catcagagtg 301 acaactccat tcttagaaac accagagacc atagctccac cctttggaac cccaaaggtc 361 tcggccgtac cttttgagac tgaggcagct cagcttcttg tgttctttgt ttcttcagct 421 tctgcttctt gtggcctctt ggcccttggg cctcatgccc gcatctgccc tgttggggca 481 agtgttccaa gacttggtag ctcgaccgat aagtgcccag aggcacccta ctctgccagg 541 aagcctcctg catacagaca ctcagctctc ttgctccatg ggtcggctgc agtactatct 601 ggcactggtc ttctggttct gctgctgccg gttctctgcc acttcccctt ctctgctgct 661 gcaaattctc tgcttctgct ggtcctctgc tgctgccact cctctatcca ttcacagttt 721 caaaactgct tccacatttt agatatctgt tagagcagca ccccagtctc ggtaccaaat 781 tgtcttaggc tgggttctct agagaagcaa aaccagtaaa gtgtataaat atatatagag 841 agagagattt atatatagga aacagctcat gcaattgtag aggctagaac atcccaagtc 901 cgtggatcag ggtagaggcc tctcccaagc cacgcagcca cagaaactgg caagcccaag 961 atcagcaggt cagagagcag ggctcccact cacatgctgt gcagatcagc tgacacctca 1021 agtcccaaga accagagatg aggcaacagg tggcagccac aagatccaga gagagcaaaa 1081 agccagaacg tctgcttata ttcagatgtg gaccacactg ccaaggagac tccctttcat 1141 ctgattggct actcacagta tatttaaact tgggagtgat tacattaaaa cactgagaat 1201 catggcccag ccaagttgac acacaactta accatcacac acacacacac acacacacac 1261 acacacacac acacacacat atatacagta tatatatatt atgataaaat gaagcaaaca 1321 cctcccacaa atatacaaac tctaaattat attctgttat aatccatagg gttttctttg 1381 gctaattttc agaagtaaat caccaggcct ttctctaata gtcaaaacaa tggagtcaaa 1441 cacaccactg atcatgaaga tggcacagta ccaggcaaca tgtttttctg ttgtacttaa 1501 ggttaccatg agttggagct gacttgatgg caactaacaa aaacaacaac acaaactgta 1561 ttcagttaag tgcagtcaga gctatagaat cttcaacatt tggattaaaa tgtcctttac 1621 cactctgtga aatagtttta gctaaattat caacttttta ggaagatttt cttctatctc 1681 aattttgctt tgcatttaat taagaagtct gttggaattc tccaaatatt tttatgtgag 1741 aaaggcagga aataaaataa aataattacc tttctgattt ttaatataat tggtaaaata 1801 ttttatataa agacatcacg aaacaataaa taattcatgt agtgtattgg taattggtga 1861 tatgagatag gaaccacata aatgaaatgt aggtctttgc catcattttc tcaatgtaat 1921 atatattaca gacactaaag atgcacatgc agtaaagttt aatgatgttt ttgaatgctt 1981 atgataccta aaagatactt caagtcatac agatatccca gaagtgatca cacggtgagc 2041 tatttattga aataaacatt acaggatggc ttaaggtcaa tttaattaaa tatatatgga 2101 gatctttttg tagttatatg tatctagcaa ttgctcattc atttaaaatc tgtttacttc 2161 tcaaataatc agttctggaa aaatagtaaa aaggtgcatg tcatcaatta gtgtaacagt 2221 tcttcaaagt taattaactt tgattcaatc aaagatgcac cagtaagttt ccatttatct 2281 ggggaggtgc tgttattgtc cagcaaccat gttagaagtt aagatcttct aagcatgtgc 2341 ctagagaagt aggattatca taaagaagtc agttcatcag agtaaaagtt gataaaattg 2401 attaattaat gaagctacac ttgaaaaaag tcacctttta aaaaagtgtc taattctttt 2461 tacagcattt tcatactgta tttaacactt acgaagagtt gttgttaacc actagaatta 2521 tcactattgt tcatggaaaa gtagacaatg aatgctcatt attcactgcc atccaatcga 2581 ttccaactca taccaaccct ataggataga gtagatcttt cccacagggc ttccaaggag 2641 cagctggtag atttgaattg ccaacctttt gtttagcagc caagctatta accactgtgc 2701 caccagagct ccagataatg aacagataaa ataaaagaca tttcagggac ttctgggcaa 2761 catggcacta tagacagaag caccaggctg accttccaga gcaaagatcc gaaaaactaa 2821 gccaagtgga gaaaatgtca gtcctgaaac cttaagcatt aaatgaagag ataaagaact 2881 cagccaagca ccaaatggag taagaaactg acagagaata gagagtgagg agagatacac 2941 gcagaggtcc cttagcagct aacgcagcat ggatctgcaa tttggactgc tatcagagat 3001 ggatgaacta gggatatgag aaagcagctt cacaaagctt ccagcaggag acagaatagc 3061 cggtaaacag caatatacac ttttccacca ccccccaccc ttcttcaccc ccactagacc 3121 tcctctgctt cctgcagcca cagtctctta gctgtgaagc accagcttca tcccagtgct 3181 gcttggattc cacctgcctc cactggccag ctccctgagt gccatttgtt ggctgctggt 3241 gttgcttttt tccacttctt ttgatttctt ccatacttct catcacctcc ctctcctttc 3301 tgtcaaacac ctggctttgt gcaccatctt tgctccttcc tgagaggctg tgaagcaccg 3361 ctcgagtgtg ggcctgtttc cagccccgtg ctgtcatgct ggtgggatcc tgggactttt 3421 ttgtttgttt gttttgaatt gtttcttttt cttttctcaa attgggagcc cattctagcc 3481 aggcagtact gcacgacttg agacctaccc cctcagtttg tgcagaatca cagagggatc 3541 cctgaggaca tttccttttt ctttgtttct gttgttttgg aggttatttt gtttgtttgc 3601 tttttatttg tttgttttgt tttctctttt tccctttttg tctttcttca ttactcagtt 3661 tctcatctct ctatacttaa cttctcttcc tgtctcctga atacctgaca ctgagtgaca 3721 cctctacccc ttttgccagg ctatacttca ctgcctgtga acaacttccc cagacctcat 3781 agctgcacat ccctgaacac ttttcttttc tttattcttt ctaattttta ttcattaatt 3841 tttcttttat tttttcttct tcttctcctt tttgtttttc tccagtccaa tggcaagctc 3901 tcttagcact cttttttgtt tgtttctgta attttggcac ctgttcttct ctccactctc 3961 tcatctttcc cacacccaac ttagctccac acataacaat ctcccatttc catcctgcta 4021 cctgcacaat gcactgaaca tcacacccag aagcagtgca ggcacggcct accagaacct 4081 tccctacact gattaccaac cgcactgttg gccctagtag gtgccacaaa caaaccatcc 4141 caggaactcc tcttcaacta gaccagccct gctgtaccat atctgagcca ctgaatctgc 4201 caattggaga aggaagtgaa aagtatagtg ctcacagacg agcaaataac aaagaacaca 4261 cagcctgcct gctcagatat aaccaaataa aacaaaagag caggacaaaa caaacaaatc 4321 tgcaatcaat aaatgaggaa aataactact gaaagcaccc aaaacagcaa aacatttaca 4381 aaaacaggac aggatggttc cagtagatgt ccaaaacaaa acaccgatga ctgcccagta 4441 ggagaaaaga cactagaact acctgatagg gaattcaaag ctctaatatt cagagctatc 4501 caaagtttga agcaaaaatc agacaaaaat gaggaaaata tagacaaatt catggaaaat 4561 acagacaaaa aaatggaaga attcaggaaa ataatgcagg aacaaaatgc taaaataaat 4621 tcagaactag aaatcataca aaaacaacga ttagaaagtg aaaagataaa caacaagatt 4681 tcagaaatgg aagttgtcgt agaagggctg aggagcaggt ttgaaatggt ggaagacagg 4741 atcagcgaat ttcaagacag acccatggat acaactatat ttgaggaaaa atcagaaaaa 4801 agaatggaga aaaatgaaga ggccttgaga attatgtggg atacaatcaa aagaaaaaat 4861 ttgaaagtga tcagaattcc agaacagggg gagaaaacag aaaaaacaga gaagatcaca 4921 gaagaactgc tgacagaaaa cttccccaat atcatgaaag atgaaaagct ggccatccaa 4981 gaagctcaac aaacccatat // LOCUS BMBL01000003 5000 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_3. ACCESSION BMBL01000003 BMBL01000000 VERSION BMBL01000003.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_3" assembly_gap 1193..1327 /estimated_length=135 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1485 a 896 c 1002 g 1482 t ORIGIN 1 atttatcgat taagatcacc accttatacg ggcacagttc gtggtgcccc aaaagaatta 61 aaatagtaac atcaaagatt actgatcaca gatcaccaga agagatataa taataatgaa 121 aaagcttgaa atactgtgag aattaacaaa atgtgacaca aagacacgag gtgaacacat 181 gctgttggaa aaaatggtgc cagtagattt gcttgatgca ggattgccac aaatattcga 241 tttgttaaaa acgcaatatc tgtgaagggc aataaagtga agcataataa aatgaggtat 301 gcctgtaaat atatgtttgt atttacatat ttgtcaactc tctctctctg tatatatata 361 tataatacaa ttttaaatca gacaatcata tggtctacta tgccaggaat gataaattga 421 agtgaaatgg catcgcactc atcatccaaa agaacatttc aagatctatc ctgaagtaca 481 acaccagtac aaggccgggg gtggactgaa gaacagacta tcaactgttt atatgcaagt 541 tcaagttgaa gctgaagaaa attagaagtc cacaacaccc aaagtatgac cttgagtata 601 tcccacataa attcagagac catctcaaga atagatttga ctcattgaac actaatgacc 661 aaagacgaga caaagttgtg gaatgacatc caggacatca cagatgaaga aagcaaaagg 721 cattaaaaat aaggaaagaa agaaaagacc aaaatggatg tcagaagaga ctctgaaaca 781 tgttcttgaa cacagagtag ctaaagcaaa cagaagaaat gatgaagtaa aagagctgaa 841 cagatttcaa agggtggctc gagaagacaa gtattataat gacatctgca aagacctgga 901 gttagaaaac caaaagggaa gaatacactc agcatttctc aaactgaaag aactgaagaa 961 aaaattcaag cctcgaattg caatatagaa cgattctgtg ggtaaaatat taaatgacta 1021 aggaaacatc aaaagaagat ggaaggaata cacagagtca ctgtaccaaa aagagttggt 1081 tcaaccattt cagggggtag aatatgatca aaaactgatg gtactgaatg aagaagccca 1141 agctgcactg aagacattgg cgaaaaacaa ggtaacagga attgacagaa tannnnnnnn 1201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1321 nnnnnnnggg aactgccaga aattcaagct tgatccagaa gaggactaga accagggaca 1381 cctttgctga tgtcagatgg accctggctg aaaagcagag aataccagga agatatttac 1441 ctgtgtttta ttgactatgc aaatgcattc gactatgtgg atcataacac attatggata 1501 acattgcgaa gaatggaaat tccagaacac ttaattgtgc tcatgaggaa cttgtatata 1561 gtcatttgaa cagaacaagg ggatactgtg tggtttaaag tcaggaaaca catacgtcag 1621 gattgtatac tttcaccata tttattcaat ctgtatgctg agcaaataat ccgagaagct 1681 ggactatatg aaaaagagct gggtatcagg atgggaggaa gattcattaa caatttgcaa 1741 tatgcagttg acacaacctt gcttgctgaa agtaaagagg acttgaagca attactgatg 1801 aagatcagac tacagtcttc agtatggatt acacttcagc ataaagaaaa caaaaatctt 1861 cacaactgga ctagtaagca acatcatgag aaacagaaga aagattggaa ttgtcaagga 1921 tttcttttta cttgaatcca caatcaacgc ccatggaagc agcagtcaag aaatcaaaca 1981 atgaatttta ttaggcaaat ctcctgcaaa agaagtcttt aaagtgttaa aaagcaagga 2041 tgttacttta aggactaggg tgcacctgat ccaatccatg ctgttttcaa ttgcttcata 2101 tgcatgtgaa agttggacaa tgaataaaga agaccgaaga agaattgatg cctttgaatg 2161 atttttttgg caaagaatat tgaatatacc atggactgcc agaagaaaga acaaacctgt 2221 cttggaagaa atacagccag aatgctcctt agaagcaagg atggcaagac ttcatctcac 2281 acattttgga catgttatca ggagggatca gtcccgggag aagtacatca tgcttggcaa 2341 aataaaaggt cactgaagaa gacgaaggcc ctcaatgaga tggattgaca ctgtggctgc 2401 aacaatggga tcaagcatac caacggttat gaggatggcg taggaccagg cagtatttcg 2461 ttctgttgta catagggttg ctatgaattg gaaccaactg gaaggcacct aacaacaaca 2521 aatatatata tatgtatata tatatacttg ccaactctat tgatgtggcc agaaaaatat 2581 tttttttaat tgtactttag atgaaggttt acagaacaaa ctagattctc attaaacagt 2641 aagtatatat attgttttat aacattggtt aacaacccca tgacatgtca gtacgctccc 2701 ttcttgaaca tggattccct attaccagct ttcttgtctc ctcctgtctt ctagtccttg 2761 cctctgggat ggtgtgcccc tttagtctcg ttttgtccta tgggtctatc taatctttgg 2821 ctaaaaggtg aacctctgga gtgacttcat tactgagcta aaagggagtt cgggggccat 2881 actctcgggg tttctccagt ctctgtcagg ccagtaagtc tgaacttttt ttgagttaga 2941 attttattct acatttttct ccagctctgt ccaggaccct ctattgtgat ccttgtcaga 3001 gcagtcagtg gtggtagcca tgcaccatct agttgtattg gactcagtct ggtggaggcc 3061 gtaatagttg tggtctatta gtcctttgga ctagtctttc cctcgtgtct ttagttttct 3121 acattttccc ttgctcctga agggaagaga ccagtagagt atcttagatg gccactcaaa 3181 ggcttttaag accccagatg ctactcacca aagtagaatg tagaacattt tctttataag 3241 ctacgttatg ccacttgagc tagatggtcc ctgagaccat ggtccccata gccctcagcc 3301 cagtaatttg gtccctaagg gagtttggat ttgtccatgg agcttccatg accttaacct 3361 gaacaagttg tgctggcttc cccagtattg tgtactgtct tacccttcac caaagttacc 3421 acttatctat tgtctattta gtgtttttcc acccccaccc ctcccctccc ttgtaaccat 3481 caaagattgt ttttttgtgt gtaaaccttt tcatgagttt ttacagtagt gatctcatac 3541 aatatttgtc cttttgtgat tgacttattt cactcagcat aatgccctcc agattcatct 3601 atgttgtgag atgcttcaca cattcatcat tattatttat cgctgcgtag tactccattg 3661 tgtgtatgta ccatagtttt tttatccagt catctgttga taggcatcta agttgtttcc 3721 atttttttgc tattgtgaac agtgctgcag tcaacatggg tgtgcatatg tctagtcact 3781 tgatggctct tatttctcta ggatatattc ctaggagtaa gattctggat cttatggtat 3841 ttctatttct agctttctaa agaagtgcca tatggttttc cacaatgatt gttccattct 3901 gcattcccac cagcagggca taatagttcc aatctccccc cagcctctcc aacatttgtt 3961 gttttctgtt tttttgatac gtgccagtaa tgctgggatg agtttggatc gaagtgtggt 4021 tttgatttgc atttctctac tggctagtga tcgtgagcat ttcctcattt gtctgttagc 4081 ctcttgaatg tcctctttgg tgaagtgtct attcacttcc tttgcccatt ttttaattgg 4141 attatttgtc tttttgtttt agaagctgtc atggtttgaa ttatgtcccc taaaaaatgt 4201 gtgtatcaat taggccgggc catgattcct ggtactgtgt ggttttccta tatgttgtaa 4261 atcctgcctc tatgatgtta atgagggagg atgggtgaca gttgtgttag taaggcagga 4321 ctcagtctac aagattggat tgtatcctga gataatgtct tgagatataa aagacagaag 4381 tgagcagaga gacaggggga cctcatacca tcaagaaagc agtgccggga gcagagcacg 4441 tcctttggac cggggtccct gtgccgagaa gctcctagtc tgggggaaca ctgatgagaa 4501 ggccgagaga gagaaagcct tcgcctggaa ctgacatctt gaatttggac ttttaaccta 4561 ctttactgta aggaaataaa cttctcttca ctaaaaccat ccacttgtgg tatttctgtt 4621 acagcagcac tagatgacta agacagacgt gttggatttt ccggtagatt ttagagatta 4681 gacctttgtc atatttgtaa tagccaattt ttttccccag cctgtagatt ctctttttac 4741 tcttttggtg aattcttttg atgagcataa gtgtttaatt ttaagaagat cccagttatc 4801 tagcttatct tctggagttt gtatgccatt agttatgact tgtatcctgt taacgccatg 4861 tattagggcc tctagcgttg atactatttt ttctgctatg atctttatag tttttggttt 4921 tatatttagg tctttgatac atttgaatta gcttttgtgt atgctgtgag ctatgggtcc 4981 tgtttctttc tttctttctt // LOCUS BMBL01000004 5000 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_4. ACCESSION BMBL01000004 BMBL01000000 VERSION BMBL01000004.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_4" BASE COUNT 1314 a 1074 c 1161 g 1451 t ORIGIN 1 gcaacaggtt tggtttggtt ttggtacctg gtatgtagct attgatctgg ccaatgcctt 61 ttttttaatt ctgattttga aagaacacta gaagcagttt gccttcaact agcaaggcca 121 gcaatacact ttcaatctcc cacctcaggg gtctgtcaac tctccagtcc tttgtcatac 181 tttagcccac agggaacttg attgcctttc cctactacaa gacgtctcac tggtccatta 241 cactgatgat gttatgctga ttgaatctag taaggaagaa gtgtcaataa ctctggactt 301 attggtaaaa catttgtgtc ttagaaggtg ggaaattaat cccacaaaaa ttcaggcgcc 361 ttccacctca gtgaaatttg taggggtcca gtggtgtggg gcatattgag atattccttc 421 tgaagtaaag gataagttat tgcatctggt ccctcctgca gctaaaaagg agacacaatg 481 cctggtggcc ctctttagat tttggaggca acatattcat catttggttg tgttactcca 541 gcttatttgc tgagtaactg aaaaagcttc tagttttgag tgggggccag agcaagagaa 601 ggctgtttaa caggttcagg gtgccatgca agccactctt ccacttgggc catatgatac 661 ggctgatcca atgatgctag gagtgttagt ggcagataga gatgctgtat ggagtctttg 721 gcaggccccc attggtgaat cacagcatgg aaccttagga ttttggagca aagccctgcc 781 gtcctctgca gataactact ctccttttga gaaacagatt tcggcttatt actgggcctt 841 agtagaaact gaatgcttaa ccatgggcca ccaagtcacc aagcgacctg agctctccat 901 aatgaacttg tctgacccac agaaccataa cgtcagatgt gcaagcagaa ctccatcgtt 961 aaatggaagt ggtatgtgtg agattgggct tgagcatgac ctgaagatac aagtaaattg 1021 catgaggaag tggcccaaat gtccatgctc tccactcctg tgccctctcc tagtctgcac 1081 ctatggctgc atggggattt ccttatgatc agttgactga ggaagagaaa acttgtgcct 1141 ggtttacagg cagttctgca ctatattcag gttccacttg aaagtgaaca ctggcagcac 1201 tacaactcct ctctgggacc tccctgaagg acagtggtaa agagaaatcc tcccaatggg 1261 cagaagttca agcagtgcac ctcattgttt actttgactg gaaggagaag tggccagatg 1321 tgttactgta tactgtggcc aatggtttgg ctggatggtc aggggcttgg aagaaacatg 1381 actggaaaat tggagacaag gatgtacgag gaagagatat gtggatagac ttctctgaat 1441 gggcaaaaga agtgaagata tttgtgtctc gtgtgaatgc taaccaaagg gtgacctcag 1501 cagaggggga ttttaacaat taagtggata agatgatgca ttctatgaaa accagttacc 1561 ctttccccag ccacttccat cattgcctga tgggatcatg aataaagtgg ccatggtagc 1621 agggatggag gttatgcatg ggttcagcat catggacttc cattcaccaa gtctgatttg 1681 ggtacagcca ctgccgagtg cccaatctgc cagcagcaga gaccaacact gagtccccaa 1741 tatggcatca ttcttctagg tgatcagcca gcaacctggt ggcaagttga ttacactgga 1801 ccacttccat catggaaagg gcggcatttt gttcttactg gaatagacgc ttactctgga 1861 tacagatttg ccttccttgc acataatgct tctgccaaaa ctaccatccg tggacttaca 1921 gattgcctta tccaccatta tggtatccca aacagcattg cctcagttca aaggattcac 1981 tgcacagcag atgaagtgca gcaatgagcc caggctcatg gaattcactg gtcttaccat 2041 gttccccatc atcatgaagc agctggcttg atagaacaat ggaatggcct tctacagata 2101 taattacagt gctagctatg tggcaacact ttgcaggatt tggtcaatgt tctccaggag 2161 gacgttgtat atgctttaaa ccagcattca atatatggtg ctgtttctct catagccagg 2221 attcatgggc ccaggaatca aggtgtagag atggaaatgg caccattcac tattactcct 2281 agtggcccac ttgcaaaatt tttacttcct ttctctgtga ccctatgctc tgcaggtata 2341 gaggtcttag ttccaaaaag aggaatgctc ccaccaggag acacaacact gactccattg 2401 aactggaagt taagaatgcc actcagcctc tttgggcttc tcatgcctct ggatccatag 2461 gcaaagaagg gagttaccat actgtctggt gtgattgatc ctgattaacc aaaccaaaat 2521 caaacccagt gctgtcaagt cgattccgac acatagtgac cccatagggt ttccaaagct 2581 gtaagtcttt acagaagcag gccaccacat ctctctcctg tggatccact ggtggtttcg 2641 aaccattgac ctttcattta gcagtcaatt gctttaacca caacaccacc agggatcctt 2701 caaaacagag ggttgcatta gccaagaaat gaacctgtgt cgattgcttg gaaagcagct 2761 atgctcacca ctatatcatc aacgcctgat tctgattacc aagggaaaat aggattgata 2821 ttatgtaatg gaggtaaagc ataatatgtc tggaatacag aagatctctt aggacatctc 2881 ttagtactac catgacctgt gattaaagtc aatggaaaac tacagcaacc caattctgac 2941 atgactacta atggctcaga ccctttagga atgaaggctt gggtcacccc accaggcaaa 3001 gaaccataac cagctggggt gcttgctgag ggtaagggga atatggaatg ggtggtggag 3061 taattctaaa taccagttat gaccacgtga ccagttgcag aaatgaggat tgtgattgtt 3121 atgagaattt tttccttgta tatgtgcatc aaatattttt gttttcttca cttataaaat 3181 ataagatata aatggggcta gtgtgttttc agttgtatgc atactagttg tatcatgtta 3241 ggcacaagta tgactttgta gttgtcttta tttagagatc gtgtgtggtt tatggtttaa 3301 ggtgccaagt tgacacaggg tggtgtcgtg gatggagtta tgtcccccca aaaatgtgag 3361 tatcaatttg gctgggccat gattcccagt attgtgtggc tgtcctccat tttgtgattg 3421 taattttatg ttaaagagga ttagggtggg attgtaacac ccttactaag gtcacatccc 3481 tgatccaatg taaagggagt ttccctgggg tgtggcctcc accacctttt atcttacaag 3541 agagaaaagg aaagggaagc aagcagagag ttggggacct cataacacct agaaagcagt 3601 gcctggagca gaacgcatcc tttggacctg aggttcctgc acagacaggc tcctagtcaa 3661 ggggaagact gatgacagca aggaccttcc tccagagcca acagagagaa agctttctcc 3721 tgaagctgat gccctgaatt tggacttcta gcctactaga ttgtgagaaa ataaatttct 3781 ctttgttaaa gccatcctct tgtgatattt ctgttagagg agcactagat gactaagaga 3841 ggtggactgt gatgcttaag gttgtgtgtc aacttggctg ggccatgatt ctcagtggtt 3901 tgacagttat ctaatgacat agtttgtcag ttatataatg atgcagtttg tcagttatgt 3961 aatgttattt gatagttatg taatgataca gttatcttcc attttgtgat ataatgtaat 4021 cacctcgatg gtgtggtcag ccaatcagtt gtaagcggag tttcctcagg gttatggcct 4081 gcatccaata tatacagatg tactggcaaa gctcactggc ttttgctcac tctggatcct 4141 gcattgggct catcattatc tgacctctgg ttcttgggtc ttgagccagc agcctgccat 4201 ttgacctgcc aatcttgggt ttgctagccc ctgcagctct gtaagtcagg agaagccttc 4261 agcctgaagc gtgacccgtg gacttgggac ttcccagcct ctacaactgt gtgagccatt 4321 tccctgagat aaatctctct cttatataca tatacacatt ttactgtttt ttcttctcta 4381 gagaacccag cctaagacaa cttgggagtt actttctccc ccaaatttcc ctgacagact 4441 atgtgtgcct tgtgcttaga ttttgccttc tgggttaact cttgttaatt ggtggcattg 4501 cctggaaggc cagtttgaga aggtttcgga gactagtggg aaagagagct gtggatggtt 4561 aaaggtgttt gcaatggaag cagagtaggg gcaggcagct aaacatcagc catccctgat 4621 gcaatccttc ctagctccca ggtctagcct gctcctgcca tgaaatcctc tctgactgct 4681 tctgcccaca ctgtcttcac cttttccaaa tgcctttatg tagaatcaga gccatatgcc 4741 ttagcctaaa attgttctat acttacattg ttgctgttgt tgttagctgc cgttgagtca 4801 gctctgactc atggtggccc gtgtacaaca taatgaaatg ttgcccggtc ctgtgccatc 4861 ttcttgaaca ttggtatgct cgagtccatc gttgtggtca ctgtttattt tgtatgcctt 4921 ccaacctagg aggatcatct tccagcactg tatcaaacaa tattctgttg tgattcatag 4981 ggttttccat ggctaatttt // LOCUS BMBL01000005 5000 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_5. ACCESSION BMBL01000005 BMBL01000000 VERSION BMBL01000005.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_5" BASE COUNT 1768 a 895 c 1046 g 1291 t ORIGIN 1 atatggaaag agaagagacc ccagataagt taagcattat tgaagaagaa gaataaagta 61 agacgactcg cactacctga cctcagaacc taccatacag ctatggaact caaaacagcc 121 ttgtactggt acaatgacag atacattgac caatggaaca gaattgagaa cccagatgta 181 aatccatcca cctatggtca cctgatcttc aacaggggcc caaagtccat cagtggggaa 241 aagatagtct tttttaacaa atggtgctgg caaaactgga tgtatatctg taaaaaaaaa 301 aaagaaatag gacccataca tcatgccata cagaaaaact aattcaaaat ggatcaaaga 361 cctaaatata aaacgaaaaa ctataaagat cattgaagaa aaattaggat caatgctaga 421 gaccctaata cacagcatta aaagatacaa accataagta acaacataca aactccagaa 481 gatgagctag ataaacacct atgctcatca agagacttca ccaaaagagt aaagagagaa 541 tgtacagaat gggaaaaaat ttttcgctat gacaaatcca acaaggtcta atctctaaaa 601 tctgcaggaa aatccaacac ctctacaaca aaaaggcaaa taatccattt taaaaaatgg 661 gcaaaggaaa tgaacagaca gttcaccaaa gaagacattc aaggggctaa cagataaatg 721 aggaatgctc atgatcacta gccgttagag aaatgaaaat taaaaccaca atgagatacc 781 acctcgcacc agcattactg cacaaatcaa aaaaatagaa gataataaat attggagagg 841 ctgtggggag attggaactc ttatacactg ctggtgggaa tgcaaaatag tacaaccatt 901 ttggaaaaca atatggtact tccttagaaa tctagaaata gaaataccgt atgatccagc 961 aatcccactc ctaggaatgt atcctacaga aataagagcc atcacgtgaa tagacatatg 1021 cacacccatg ttcattgcag cattgttcac aatagcaaga atacggaaac agcctagatg 1081 cccatcaaca gatgaatgga taaacaaact atggtacata cacacaatgg agtactatgc 1141 aacaataaag aactatgatg aatttgtgaa gtatcccaca acatgggtga gtctggaggg 1201 cattatgctg agtgaagtaa gtcaatcaca aaggggcaaa tattgtatga gaccactagt 1261 ataaaaactc atgaaaaggt ttatacacaa aaagaaacaa tctttgatgt ttacaaggga 1321 ggggagaggt tggggtggaa aaacactaaa tagacaatag ataagtggta actttggtga 1381 agggtaagac agtacacgat actggggaag ccagcacaac tgattcaggg taaggtcatg 1441 gaagctccat ggacaaatcc ttgagggatc aaattactgg gctgggggct gtggggacca 1501 tggtctcagg gaacatctag ctcaattgtg ataacatagt ttataaagaa aatgttctac 1561 attctacctt ggtgtgtagc gcctggtgtc ttaaaagcct gtgagcagcc atctaagata 1621 ctccactggt ctcactccat cgggagtaag ggagaatgca gaaaacaagg tacaagggaa 1681 agattagtcc agatgactaa tagatcacaa ctatcatggc ctccaccaga ctgagtccag 1741 tacaactaga tggtgcccag ctaccaccat tgattgctct gacagagatc acagtagagt 1801 gtccaggaca gagctggaga aaaatgtaga aaaagattct aactcaaaaa aagaccagac 1861 ttactggcct gacagagact ggagaaaccc cgagagtatg acccccagtt acccttttag 1921 ctcagtaatg aagttgctgt ggaggttcat cttttagcca aagattagac aggcctataa 1981 gacaaaacaa gactgaaggg gcacaccagc ccaggggcaa ggaccagaag gcaggagggg 2041 acaggaaagc tggtaatagg ttgagaaggg acagtgttga catgttgttg gggtgttaac 2101 cagtgtcata aaagaatata tgtacagttt aatgagaagc tagtttgttc tgtaaacctt 2161 catctaaagt acaatagaaa aaataaataa cacctccctc acagagttag tatagtaaat 2221 gatttaattt atatacaaca cttagaacca tgttctacat atagtaagta gtcagttaac 2281 accagttaat gtaaaagatt atccaacatc aacagcaata tccataaaat acatcagcat 2341 ataaactcat gatacttatg atttagtaga agcagcagtc aagaaatcaa ataatgcatt 2401 gcttttggca aatctgctgc aaaagacctc tttaaagggt taaaaagcaa agatgtcacc 2461 ttgaagacta aggtgcacct gatccaaact gaggtgtttt caatcacctc atatgcatga 2521 gaaacctgga cgatgaatga ggaggactga agaagaattg acgcctttga attgtggtgt 2581 tggcgaagaa tataccatgg actgccaaaa gaatgaacaa atctgtctcg gaagaagtac 2641 agcccgaatg ctcctcagag gcaaggatgg ccggactttg tttcacatac attgaacatg 2701 ttatcggggg gatcagtccc tggagaagga catcatgctt gataaagtgg agggtcaccg 2761 aaaaagagga agaccctcaa caagagggat tgacatagtg gctgcaacaa tgggctcaag 2821 cataacaact attgtgagga tggcccagga gtgggcagtg tttcgttcta ttgcatatag 2881 ggtcactatg agtcggaact gacttgatgg cacttaacaa caacagcaac gtgatttagt 2941 acgaaaattt taacttactt ggtaagcaaa catgaccaat ctcttgctat aaaattttgt 3001 gataactttt tttttctttt tccttccttt gtcttttttg gtaggggagg gggctctctg 3061 ttctctgcta gaaggaacag aaaggaacca tttctttcta tcgctcagca tttattttac 3121 aatagttggg tccttcaaca tttattgagc actcattatg ttctgtgccc tgtgctaacc 3181 atgaggatgt aaagatgaaa aaaattctgt cctttccctg aagggtttca caaacttacc 3241 ataaagacag acagataaat aagaaatgac atacatatag agccatctgc cctgtggcag 3301 gctgtcagaa gtttataata cattaacttt ataatcctcg caacaatgtt gggtggtagg 3361 cattgaggct cggtggacct atgtaacttg tccaaggcct actctgaaag agctggtata 3421 tgaaaccagt atcttcaagc aataggtcta tgcctttccc actaatgtta tgacagagga 3481 aatggcaaca tctctgccta aaacaaaacc aaacctgttg ccatcaagtc aattccaact 3541 cagacattgg ataaaagact gataacagtt gtctactcat agctcaaatc acttgtcagt 3601 tcaggtatgt gaactcgaat cagactagtt gtttagtgca tttactagct atttcaggaa 3661 agtagtcaaa ctaataatag gtagccttga tatttataca gcaagtaaaa actattgtgc 3721 agaactatgt ctgaataagt atttttaaat ttggtgaatc attttcaacc aaaaaatata 3781 ttgttattta aaaaacaaaa tcacacataa gctcttcata gttttgagct gtgattggag 3841 aaggccctca tggtgtattt cctatatttt caactacatt tcaattaatt agctaaattg 3901 gtagaaatct aagctccaaa gggatcagca ttatggtttt aagcctgcag gagaccagtg 3961 gcttctttag ctgtaagagg aatctctgat cgtttacaaa ggggaatgag tgatggcaga 4021 ttggaagtat gctaaagaaa aaaaagttac atgagcccac ttttgagagt cagtccactg 4081 attatgttaa cttataatga gtttaagcac agctcagtgg gtatgcttag tcctaaaaat 4141 gatagacaat tcaaaacaaa aatatgttag tctttgctaa ttttcagact aattaatttg 4201 aagctctgac tttaaggaat ttttagaact gaggatgtct tgttttagag gacatcacct 4261 attggcaacg tgtggcattg cagttttact ctgttagatg tcaacgctgc atcaagagga 4321 ggatgaattg atcattaaga ggaggaagag ttgatcacgg atttgaaatc ggagaaatga 4381 tagagatgat aggaatcata gagaacatgt gggcttggaa gctcaaaagg acatgctttc 4441 tcctcttctt cccttccccc cattactatg atgtgcactt ctgaacagga aaccagatct 4501 ataactggaa taaattgtaa tatgtggatt gtggttgttg ctgaaatctg ttccttgtga 4561 gacttaccct gacacattta gatagattct ggattcaatg agcccattga cctcgttcaa 4621 aaggttaagt tttcaactgt cattaatctg aaattaatgg ggaaaattgt ttatagtttg 4681 attttatttt gaagcactca tgtggagcct gtgcatggac caagaggcag tcattcaaac 4741 agaacaaggg gatactgcat cgtttaaaat caggaaaagt gtgcatcagg attgtatcct 4801 ttcactatag gtattcaatc tgtatgctaa acaaataatt caagaagctg gattatataa 4861 agaagaacgt ggcatcagga ttagaggaag actcattaac aacctgcgat atgcagatga 4921 cacaaccttg cttgctgaaa gtgaagagga cttgaagcac atactgatga agatcaaaga 4981 cttcagtatg gattgcactt // LOCUS BMBL01000006 5000 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_6. ACCESSION BMBL01000006 BMBL01000000 VERSION BMBL01000006.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_6" BASE COUNT 1376 a 1182 c 1104 g 1338 t ORIGIN 1 actttgctgg aaggattgtg aaatggtgca gtcactttga aaaactgttt ggctattctg 61 cataatgttc agcatacagt tacaattcca gcaatcccac tcctaggtat atatctaaga 121 gaactgataa catatgtcca taaaaacttg tatgcaaata tctatagcag cattatttat 181 aatagccaaa aagttaaaac aatccgcgtt tcccaactta tgaatggata aacaaaatat 241 atctatacaa tgaaatatta tttatcaata aaagaaatgg agtactgata catgctacaa 301 catggatgaa ccttgtaaac gttatgctac atgaaagaaa ccagtcacaa aggtcactaa 361 ttgtatgatt gattccatta acatgaaatg ttatgaataa gcaaatccac agaaacagaa 421 agtacattca tggccagggg ctggggaaag gggaaaatag ggagtgactg ctaatgggta 481 tggtgtttct ttttagagtg atgaaatatt ctaaaacgga ttgtggtgat gtttttacaa 541 ctctgtgaat atattaaaaa ccattgaatt gtgtacttta aaaaagtgaa ttttatggta 601 tgtgaattat atctcaataa agctgttact aaaaaagaag ttataggagc aagttatagg 661 gtttagatta cctgaggaca acaggaacca ctgaacaatt ttaagcagga aagcaaaatg 721 acccatgttg tgctgtggaa agatcactgt aggcatcatg tgaagacctg attgaaggga 781 gccaacacag ggaaaccaat tagaattaaa cgagataata tgtacaagat gcctggtaca 841 atgcctggta cataataata aatgacactt cccacttctc tagtctgtct ccctcatatt 901 cttccttctt cttttccata aatcatatgt tgttgtgtgc cgtcaggtcg attctgactc 961 atagaaaccc tataggacag agtagaactg ccctgtaggg tctcaaaggc tgtatctcta 1021 cagaagcaga ctgccacatc tttctgctgc ggagcatctg gtgggtttgg gctgcctacc 1081 tttcggttaa cagctgagcg cataactact gcaccaccag tgctccttat ataaatcatg 1141 tagtaaccta tatttccaca tacacatttg tattaggctg ggttctctag aggcacaaac 1201 ccagtgaaga gtgtatatgt gagtatatat atacatatgt acatacacac acacatacat 1261 acatatacat atatatttat ttttttatct caaggagttg gctcacacag ttgtagagtc 1321 tagcaagtcc caagtctgtg gatcaggcgt caggctggag gcttttcctg actcacatag 1381 ctgcagggac tgatgaaccc aagattggca ggtcagacgg ctggctgctg gctcacaggc 1441 tgcagaggcc aatgaatctg aagattggca ggcaggggtc agatgatgat gagccagatg 1501 caagattcag atcaagcaac tgagctttcc ggaacatccg tataaatatt ggatgcaggc 1561 cacagcccca aggaaacttc cattacaact agttggctga tcatatcaga tcacatcatg 1621 gaggatgact acatcattac atagctgcca aatcacacca ttatataagt gctaaattat 1681 atcattacat aactgccaaa ctactgacaa tcatgaccca gttttctctg gacctcaatt 1741 ttctcatcaa gtcaagtagg agtaatagta caggatattt atgaaaatga aagagatgag 1801 aagtatgctg agtacttaga acaatttctt ggtccttagt aagcattgaa tgaatgttag 1861 ccattgcccg tattaccaaa agaataaagg agaaaagatc atgtggttcc catctagtgt 1921 gccaggaccc cctgacaccc acctgctttt ctacttactc cccaccctgc ctggaacccc 1981 ctcacccctt tgcagtgtga atactccttg tctcttctgc aagatccagg tcagcggccc 2041 ctcttctgag ctcccaggac agtggaactg gattagtctg gacagtgagt tcctgctttc 2101 cctccagatc cattgcccag gctcagtgga tggttgtcca acgagtgaat aatcccttgc 2161 ttttgtatgt cgctttaggt cataaagctt gtaggagtac attatttgaa ccaatcctca 2221 gaagcacact acaaaggaga tccttgttct acagatttaa aaaaaaaaaa gtatgagtgg 2281 ttctgtggag ttcactctgt cccatgggtt tgccacaccc caggacagga gggcccctcc 2341 ctgcactacc tcttacagcc aaatgtgggc gtcacggggg aggtgactgc cagtggaggg 2401 gcggcttctg ggaaacctca ctgaagttac cacaaagctg gaagctgcac ccacccagtg 2461 ctccttgtgg gtcgcggcct tctcagtcca gtgaacagtg acaccaaaag cacccgaccc 2521 tgtaacccag cctgtgctca gacccgccct tccggggatg ccgaagtgac cagatctcag 2581 gctggtgtgg gggtggtgag tgtcctcctt cctcagagac atgctctttg actttggtca 2641 cagagtggag ctctggttgg tggtgggagg aagcggtgga cgcagcagga gcactaccct 2701 atccgcagcc tctggggctc ctcgggctgg tctctggcca gaggctgtct tcctcattga 2761 cctcttttct tccccctatg cctgacacat ccttccttta tcaaaagcag ctggttcacg 2821 ttcccctgaa atgactttta ggggaatggc atttatgtct cttggcattg accaggtgga 2881 gcaggtgctg gcagcccagg tgaggtgggt gtggccctga cagcccacca tccctgagga 2941 gttggggtga agccctcatg ggtgtgatgg acaccacagt taagactcct ccccagcctc 3001 cagctccagg accccacact gaggcctgca gcaaccctct ttcttccagg cttttcaatc 3061 atccaaacct ttattgagtt cctactgagt tctaagcaca gtgacataac ggtctcagtg 3121 caaatgtcat ttcctccctg aagcctttga ggctctgccc aggagttaag taagccccca 3181 tttccaatag gttaacactt gtctctggtt acatgtaagt gggctttaga atcactcaaa 3241 cctgggtttg aatcccaact ctattgttaa ctagctgaga gaccttgaaa tgttgtttct 3301 ctgtgagcca acttccccac ccataaaaca aggactccgt cgatcacata gttagcatga 3361 gggttagatg aaatcatata cataaggcag actgtagaca cacagtacac agctcctctc 3421 tcctcttctg tccaggagat ggaggtgcct agcactcagc aagtgtactc taccctcttt 3481 ccacccctgc tgtggaagat gaccacaggc ttcagcccac tccatgagtc tctgttcttt 3541 tgaagctggg gccgctccct gctgacatcc ccacagcctt acccataggg tctgagctcc 3601 ttccatcttt cccagtgagc gtcaggcagg cccagacagg taggtcatca ctgctgtgtt 3661 gccagccctg ccccaggtgg gtggggaggg gcagattttc ccatcccaag gcctccaggc 3721 atgattctcc catcttagtt atctagtgct gctataacag aaatgccaca agtgggtggc 3781 tttaacaaag agaaatttat tctcccacag tctaggaggc tagaagtctg aattcagggc 3841 accagctcca agggaaggct ttttctgtct gtcggctctg ggggaaggtc ctcaatcttc 3901 ccctggtcta ggagcttctc agtgcaggaa cccccaggtc caaaggacgc actctgctcc 3961 cggcacagca ttcttggtgg tatgaggtcc ccctgcctct ttgcttgttt ctctctttta 4021 tatctcaaaa gagactgact caagacacaa cctaatcttg tagattgagt cctgccttat 4081 cagcataact acctctattc cttcctcatt agcatcatag aggcaggatt tacaacacat 4141 aggaaaatca catcagatga caaaactgtg gacaatcaca caatcctgat ggcctagcca 4201 agttgacaca tattttgggg gacacaattc aatctatgac atcccctttc tggttgagct 4261 actttaggag ccctgggcat ctagagagca atagtgtcac ttagagagct aagagaggat 4321 caaggaagaa agccagactc cttgcctgtc cctcagtccc cttgtgcgtg ggcggcatct 4381 actgatgtag gggaaggagt aaggggtagg ctgggggtgt ggtctagatg tgtgaattca 4441 gacaactgac ctctgtgata ccaagcgatc tcatgtgtaa aatgaagatc gtgtctccag 4501 agttgctgtg ggaatcaaat gagattaaca cacgagagct ctgaactgta aggcaagaaa 4561 tacatcccat tggtcacgat gttgttgttg gttgctgtct agtcaattct gcctggcaat 4621 ctgcttctga aaggttacag ccttgaaaac cccatggaac agttctactc tgcacatatg 4681 gggtcaccat gaatcacaat tgaccccaca gcaactaaca acaacacttg ccaacctcat 4741 gcaaaaattt cttgttagca acagcaccca gacaagcact cttactgagt acatttattt 4801 tgtggggggc agactgtcac ctggttaaga cccctcaggg catatggttt cacatcccgg 4861 ttttgaccac tgaggaaaaa catatttttc tcaaaaaata tagttgttag tctagaatcc 4921 aaattaaaat ttgatagcat ggtcagcata ttatgcctct gtcttactga ctgcactgaa 4981 atttgtcttt tcctgacaca // LOCUS BMBL01000007 5000 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_7. ACCESSION BMBL01000007 BMBL01000000 VERSION BMBL01000007.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_7" assembly_gap 688..792 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1127..1151 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2732..2809 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4084..4115 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1586 a 783 c 849 g 1540 t ORIGIN 1 gtcactcagg tatggtacag cacagcagga gaaagaacat tttttgatgt aaaaatatat 61 gaggaggaag aggctggaga atatatttta tacatgttgg gtggatatct aaggtagata 121 tccatgttca gaaattcaat catcagtggg atttgtaggt ctagactaga gtttaggaga 181 gaaaaaaagc tacagacata gatttgggga acattagtcc atagatagta gttgaagcca 241 tagatgtgaa tgatattggc ttattttagt ttgtaggagg gtttagaata gaaacaaaaa 301 agtctacaaa gaaaaatgat tctcaaatgg aaaaagaagg aaaagctata gaagtaggag 361 aaaattcaag agtatagaat aggagaagtg aagaaaagag cttatcaaga agaattcagt 421 gttcaattgt gccatatact gctaagaggt caaagagaaa gactgagaag tcttcatcat 481 ttagtataac actcttctga tattctgaaa tgcataccta ctcatcttct agttagaaag 541 ttttttgttg ttcttttgtt ttgtgtttgg gttttatttc aagtgtgtta ttttcagact 601 tgctcctcaa caatagaggc actactttac accaatttaa aattggattt ttagtgatgc 661 cagaatgctc cttagaactg agaatggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 781 nnnnnnnnnn nnacaatgga ctcaaacata ccaatgatta ttaagatgac acaggactga 841 gcaatgtctc attttgttat ataggttgcc attagtcaga gctgacttta tggcagctaa 901 agacaatatg ccaccactaa cttaaaagga gtgccatggt cataggaact gggtagttac 961 ctcttttaaa aaatgcgtgt ttgctatcat ttagacaact caaatatacc gaactcctga 1021 gttgaatttt gacactggag tacaaggtat atgagggcaa tataaatctg gtttcttcac 1081 cattgtattt ctcagcacta gacattatga ctggcataaa ttagatnnnn nnnnnnnnnn 1141 nnnnnnnnnn nctaaaaata tattttgaat gagttgatga atgaatgaat gaagcacctg 1201 gggaagagct agaattatct gatattttcc ctgtatagtt ggaaaaatag aggtgatgga 1261 ttctggggag agaatcaaat agaatgcaaa aataaatgtt aactgacctt ctgagaacaa 1321 ctgaagggaa gttttatatt aattagcaaa aataaaaata tcttctgtcc aacccttaga 1381 tgcaatcatg catatattat cgaacaaatg tatttagctg gctaaacact attaaggatt 1441 attagaaaac acaagagagc caaaaataac ttaacaagtg actaacgaca acaaacaaaa 1501 tcggcactga caaggccaaa atagtgcaaa gtggaggcaa caatttaaat gactcattca 1561 tgataatatg ttatgaaata atagtaggtc ctcagtaaat catttttagt ctgtttctct 1621 aaagcaatgg ttactaacca acacagagaa tgccatccac tctttctcct tttctctgct 1681 acaaaatatt agggataata actctattgc tatgattaca atcattaaac ttctttatat 1741 tctttttttc tttcacttta tattcaatta attgttttga gtacatgtct gagtgaacag 1801 aactaccatt ctagggtata acagggagaa aaatttaaaa gtagaaatcc ccccccccaa 1861 aaaaaaacca tcaagctacc ccacctcaaa acaatcttag aggaataact acaagcatat 1921 tggagggatc attttggtaa aaataaaatg atgccaatgg tgagaaggta gctagagata 1981 gaggaattat aatgctttca gatgcaagca acaaaacaat cagccatagc agcttaaaca 2041 ataagtaaaa ttacctctcc caacacaaat ccaaagtcag aatggttcaa gggttggttc 2101 agtggctcag ggatgacatc agggacccag gctttcaata ttcttgctct gccaaccctt 2161 tggattactt ggattactat ttttatccat tgccggtcta ctcatgttac aagatggttg 2221 ccataatttc aggaaactca tgtagataaa gtacagttta agataaaagt gaatttctgt 2281 ctcctctatt tctctctctc tttgaggaaa ataaaatgtc tcaaaagcct cccagaagac 2341 ttttccttgt tccattatcc atgggtaagt cacatgtcca tgccctagct gcattctata 2401 cacaaactct accatcaagg actgagggag atgaggaggg atgtcaatca gcagtgtccg 2461 tctcttcttt tgaatagaca gatcacagtt cacatgcttg gcatttcctt tcctcaatct 2521 catttctctc aattaatgtt tctaagctga cttcattgcc ttttatatta gcccaattaa 2581 aggtagtatt ttgcccctta ttgaatttct atatgactaa tattgtaatt tccctaagta 2641 tcctatccct tagattttag ggttgctagc tcatcccact cacaagtaac ctatgaaagc 2701 aagaaggttc aattatacaa gcaagacagt tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2761 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna gtgtagaaaa 2821 caaaaaatat tatatgtatt gtcttgctat ttaatgacaa gaagaatttc tgtatgtttt 2881 tggtatatta gcattgccgt atctacttaa accgaagact cactgatgtc ttctcttaaa 2941 aagaatacgg tctataaagc aagaggcttt gtaacacaag gaagaatatg atgttgaaag 3001 tcctttataa tcatataatt ttaaaatttg gaggcaattt ccattctaaa tccctcactc 3061 cacagatagt aaaatggaga cccagagaca tgagatgact tcctcaggat cacttaataa 3121 ctaagaaaaa gagctgagaa gttaagcagg ttgtctaact gaaatttctg cctttgttct 3181 atttcaccat catcccttgc agtaacactt cagtaaattg tcaaatctca acctgaaaag 3241 ctcaaatgct catggttaag tgaaagttaa tcaaaatacc gtttttcctt tcaaccaaaa 3301 aaaaaaaaaa aaaaaccaaa tccattgatg tctagtagat tcaactcata gtaacaaaaa 3361 tgtttctaaa atagtttttt cccttctgtt ctctgcctta tttaaaacat gagcattaat 3421 atggtgcagt ggttaagagc tgggctgctn natggggcag ttctactctg tcctgtcgga 3481 atcaactcga ggacaatagg ttttgttggt tttagcatgt tctggagtat ttctgatcta 3541 gcagcatctt ggtattttca taatgaacct aattttttca tcgttctgtc acacatattt 3601 tgagagttta gaaagttaac ctgcattatt tattactggc cctggatcat gttttagaca 3661 gtgtttattt gatgagtttt atgcccctgt ggttgttttg aatctaaaac caagatatga 3721 gctctttttc ttcagttgcg catctttgtg ttaaataagt tatcaaatac aaaaaataat 3781 tctgattggg aattctatat gcttttattt ttatctttct atagttctaa tgttttttaa 3841 tttttataag aaattgcaga tcaatgatga atgagttaag aatatgaaag attttagtca 3901 ctgttcttga attctttgat ctgatgatcc aaaatcttgc aataattaag ggcatcagga 3961 aggtttgtaa gggcttgttg aggggagaaa gagagcatct cttctttcgc acaggcttgt 4021 tgagatggca agtagccctt cagctctgtc ttccttaaat ttaagccacc caggtgaacc 4081 tttnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngacat tattctaaac atgaaacaat 4141 tactcttgca cttgtgttcc ataatttcta tacttttttt agagaacaac ttgtagaaat 4201 actatggctg gaacttcagg ggctgaaaga ttcataatta acctctcttt ctcacttcac 4261 ctcagggtgg tgtagagtaa ggctgggtgg gacaagataa gataaggcag gaaagggaag 4321 aatatgataa gaagtattcc aaaaaccttg ttcttcataa ttttgggaaa tgtttttaaa 4381 tgcataatta taatcaataa ataggattta aaagaagcat gaatacactt atttaaaaat 4441 actggttctt tgttaaaatt ttggcctctg gagttgatct aaggataaga cagacttaaa 4501 atgaggtcct cttattgttt tggttactaa acatagataa agtctatgat ggacctagat 4561 taggctaatt ccagtgtaaa atagttattt caataactat tcagcatatc ccagcaagtg 4621 aagagaggag aatgatgtca tcatttccaa actacaggta atctgactaa accccaatgt 4681 ggctgaatca tcatcatcaa cttaggtgac tgaatatcta ctgagccctt gatattattt 4741 aagataccat gagttctaga aactatacct ttacttctaa gatattatct caaatgaact 4801 caatagaatt cattgatgta gaacttctat tagctctatc tttggaaatg ctgttctact 4861 tcatagcagt tccaatttcc catttccaaa aacctgtatt agcttagtag tttgttctgt 4921 gtatattcat gtacttcata tattttatag gtttgaagct atacctttat cattgttttt 4981 attgttgtag tttaaatgaa // LOCUS BMBL01000008 5001 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_8. ACCESSION BMBL01000008 BMBL01000000 VERSION BMBL01000008.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5001) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5001 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_8" BASE COUNT 1485 a 1124 c 1089 g 1303 t ORIGIN 1 tatttgtgtc tcatgtgaat gctcaccaaa gggtgacctc agcagaggat gattttaaca 61 atcaagtgga taggatgacg cgttctgtgg aaaccactca tcctctttcc ccagctactc 121 ccgtcattgc tcaatgggct catgaacaaa gtggccatgg tggcagggat ggaggttata 181 catgggctag cagcacggac ttccactcaa caacggtgac ttggctacag ccactgctga 241 gtgcccagct gccagcagca gagaccaaca ctgaatcccc gatatggcac catcctttga 301 ggagatcagc cagcaacctg gtggcaagtt gattacactg gaacacttcc atcatggaaa 361 gggcagtgtt ttgtccttac tggaatagac actctggata tggatctgcc ttccctgcac 421 gcaatgcttc tgccaaaact atcatccgtg gacttacaga atgccttatc caccatcatg 481 gtatcccaca cagcattgcc tcagatcaag agactcactt cacagcaaat gaagtatggc 541 agcaggccca tgctcatgga attcactggt cttaccatgt tccccatcat ccagaagcag 601 ctggcttgac agaacgatgg aattgtcttc taaagacaga atgacggcac cagctaggtg 661 gcaatacctt gcagggttgg ggaaatgttc tctaggaggc tgtatatgct ctaaaccagt 721 gcccaatata tggtgctgtt tctcccatag ccaggattca tgggtctagg atttaagggg 781 tggaaatgga gtggcaccac tcactattac ccctagtgac ccacttgcaa gatttttgct 841 tcctgttccc tcgactttat gctctgcagg tctagaggtc ttagatccaa agggaggcat 901 gctcccacgt ggagacacat cactgattcc attgaactgg aagctaagaa tgccacctag 961 ccactctggc ctccttatgc ctctgggtca acagacaaag aagggagtta ccatattggc 1021 tggtgtaatt gattgtgatt accaagagga aatcagactg atattacata atggaggtaa 1081 agaagagtat gtctggaatg caggagattc cttagggcat ctcttagtac taccatgccc 1141 tgtgattaaa gtcaatggaa aactacagca acctaattcc gacatgacta ctaatgaccc 1201 agacccttca ggaatgaaga tttgggtcac cccaccaggc aaagaaccac gaccagccaa 1261 tgtgcttgct gagggcaaag ggaatacgga atgagtggtg ggagaaggta gttctaaata 1321 ccagttatgg ccacgtgatc agttgcagaa acaggaactg taattgttat gagtatttct 1381 gctttgtatg tgtgcatcaa atatttctgt ttccttcact tataaaataa aagatgtaaa 1441 cggggctagt gcattttcaa ttatacacgt tagttgtatc atgttacgca cacgtatgac 1501 tttctaattg tctttactaa gagattacgt atggtttaaa tagatgtgta catgtgccaa 1561 gttgacaagg ggaggaatgt gatggttaag attgtgtgtc aacttgactg gaccatggtt 1621 ctcagtgttt atatgggatc actaccatga ctgaatatac tgtgaggtag ccagtcagat 1681 gaaagggagt ttcctcgggg tgtggcctgc atctgaacat aagcagacat tccaggtgtt 1741 tgctcactct ggatcttgcg gatgcctcct gtcgtctcac ttctagttcc taggacttga 1801 gctgccagct tatctgccga acttgggatt cgccaatctt cacagcctat gagcggagcc 1861 ctgctctctg acctgccgat cttgggtttg ccagcccctg tagctacatg aatcaggaga 1921 aaccttgcat tcttgtttgc ggatcttgga attcgtcaac cttcacagcc tgcgagaggg 1981 agctctgctc tccaaactgc caatcttggt ctcgctagct tctgcagctc catgaattgg 2041 gagaggcctc taccctgatc cacagacttg ggacattcta gcctctacaa tcacgtgagc 2101 tgtttccttg acataaatct ctctacatat acatatttat acgctttact ggttttgctt 2161 ctctagagaa cccagcctaa gacagatggc aagcaaacct ctggtcctcc ctactcttac 2221 cctcattgct agaaaggcag ttactacgta gaacatttag cacaaaccag ggtgtccaac 2281 atttcccatc tcttgccagg tcagcttcac tagccctgta ctccctactt ctcctcctca 2341 gaataagttc tccccaccca gaaactgtga actaaggaaa gagtggatca aggaattctc 2401 cggaagccac ctagaagacc acgagtggga ggtgagtctg catttggata acaacagtga 2461 tgcgtgagct ctatgtgcca acccacagtt accagagaaa gagtgaaggt gtgctctctg 2521 atgtccccgt gtactcctgg gcactactga ctatggagag aggcattctg ctggcataag 2581 ttcctctccc tcctgcagca aaaatcaccc ctagtccttt actctggatt gggttttatc 2641 taagtatctt ctgggactgg ggtacacaga tgctggttcc taaatactcg ttgtccttca 2701 ctgtgaaagt catcactcag tgaatgccaa cgacctaaca gccacccagg gccaatgcaa 2761 cactgaggat cacactaaag ccatgggcgg gtagcatctt aattttgccc cccaggagac 2821 tgggacaaag tgatggtgta taccatgagc tttggagatc actgaacaga gatctctagc 2881 aatgaagaca gcagtactct ctccaatctg gaggcagaat gataaatgac aggccaagga 2941 gttgtggagg tttggtacct acctgatgac gcgagtatgg ccttgtaagg ttgtgccaac 3001 ttccccactg ccgtctttcc acttataaag gtcgacccgt tggttactct ggaaagaaac 3061 gaaggcagca agtagcacaa catgcatatc agaatacgtg ctgaaggttg agaagaggaa 3121 accaggtagg aaccaacttg cacagcaaac atcttacggg ttgagctttc aaaaaaacca 3181 ttagatgtaa gtacaaccag gattagcctg aactaagctc ggtatgtagg actctgaatt 3241 tcaaaaagga aaggcaggac tgttttttaa aaacactcct cttggaacag ttacagctga 3301 aagaagctat atacgcacta tcaagcacgt gagttatgga tcatggagac acctccaacg 3361 actggaggaa cctgttccct gctctaaagg taacaaaacc catctctcca actaactgtt 3421 gtcacataga tgttttaagc tcacccttcc cactattaaa tgcctagagt ccctgtacct 3481 accacacatt taaaaatgca catacagaga aagaaaaagg aaacatcaaa aaggtgctgc 3541 aaaattatgc cagacactgt aaaatatgcc tacgcttcat ttcttaaagg gtgaaacaga 3601 aagagacagg aaaaatgggc cagaagaaat cactactaca ataggaaaaa ggaaaaaaaa 3661 aaaacgccac catcaaaata cttaaagaaa caacaaacct taaggggcac tgagtatctg 3721 gtaagagtga taaaaaaatt cggaaatgga ttgtagcgat ggttgcacaa catgttaaat 3781 gtaattaaag tcaatgaatt gtatacataa atatggttga aaatgccaaa tgttttgtta 3841 tatatatttt acaatttaaa aaaaaaagct tggttcctaa taacattaac acactaactc 3901 atttgctctg ttccagcatg tataatgttg tttcaaaatt atggtgtcaa tattgctact 3961 aacaataaaa ctactgaata atgttttttt ttaaaaaaaa agaagaaaag aaacaacaaa 4021 ccagcaaagg ctcccgaagt atcatgaatt tatcatgaat atcataaata tcatgagttt 4081 atgaaacaca ctgagagtga acaaagatta tttaactgac tgacaatggc agccatttaa 4141 tactttctga actgataata tatacaatag gtggatttta actttaagtc agagacaaac 4201 agatgtataa agttctgaga tttcctgaaa agccaggaat gggagaaccc attgccgttg 4261 agttcattcc gactcatagc aaccctacag cacagggtag aactgctcca taggattttc 4321 aaggctataa tctttacaga agcaggctgc tacatctatc tcctatggag tggctggtgg 4381 gttttagcca ccaacctttc agttagcagc caagcacttt aaccactaca ccaccaggat 4441 gtggttaaaa atggacagga tttaaaacag cttccagtgg gaacagaagt gaaagaaatg 4501 tccccccttt ataataagag tccctgccat ttcctgaaga tgtgctatga gcaaatgcac 4561 catgcacctg agcaaacctg acctccacct tcacacacac actacagggc aggtgttact 4621 cacccacatt tcaaagatga ggtgacggag gctcagagag ttaagtggct taagataaaa 4681 tagtgaatga taaaagtagg acttgacctc agttttgcct aactccaaag tccaggctct 4741 ttccattgca aaaggctgcc ttcctcccac cactcctaca caaatgcagt gttagtccac 4801 ttagagcaca gtctgaatca aggttcccag ccagggacga ttttgcttct cagaggatgt 4861 catggtttga attatgtccc cccaaaaatg tgtgtatcag tttggctagg ccatgattcc 4921 tggtactgtg tgattttcct gtatgttgta aacctgcctc tatgatgtta atgagggagg 4981 atgggtggca gttgtgttag t // LOCUS BMBL01000009 5001 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_9. ACCESSION BMBL01000009 BMBL01000000 VERSION BMBL01000009.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5001) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5001 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_9" BASE COUNT 2008 a 880 c 853 g 1260 t ORIGIN 1 ctgtacattg accaagatgc agctgctcaa acaaaacaag gagatgctgc atggtttaaa 61 gtcaggaaag gcgtgtgtca gggttgtatc ctttcaccat acttattcaa tctgtatgct 121 gagcaaataa tctgagaagc tggactatat gaagaagaat ggggcatcag gattggagga 181 agactcatta acaacctgca atacgcagat gacacaacct tgcttgctga aagtgaagag 241 gacttgaagc acttaatgac gaagatcaaa actacagcct tcagcatgga ttacacctca 301 acatcaacaa aacaaaaatc ctcacaactg gaccaataag aaacatcatg ataaacagag 361 aaaaaatgga agtttccaag tattattaaa tgcaagtatt attgaaattt tggttttctt 421 tgtagcttat ctctttttac catatgatat aaaaggtgaa agcataaaac aataattatg 481 aatctatttt gctgggcatg tgttgtgtaa agatgaaatc tgtgacaaga acactgtaaa 541 ggcagagggg ggagaggtac aggagcatag tgtttgtata ttattgaaaa tcagttggta 601 ttattcagac taggtcataa tatgtttaag atgtggtttg taacacccaa ggtaacctct 661 cttactattt tatgttgctt ctttcttggt tcaacttttc gtctgttgag ctaaaacttc 721 tcctattttc caaagttctg gcaaagttta ttttaacaaa ttttgttcct cttttatgtt 781 tccttgaagg gacgagcact tgaagctacc tactccacta tttttgctaa aattttccct 841 tattttctgt ttaatcctgg tagattcttt agtgactaca cttccctcat tcatgttaat 901 ctgtgtcttc tttctttttg ccttaatatc ttggctagca attttgcaat gttattgatc 961 ttctcaaaga actgacttta ctgtcattga attactgaat gtttttttcg tttttactat 1021 tcatctttgt tggctacttt aagttttatt tgctcttctt tttctagctt cttaaggtgg 1081 aaattagatg attcatctga ggttttcatt ctagtctcaa ttagaggttt agtgctataa 1141 aaacaaacaa acaaaaaacc tctaagaata atttagaagt agcctttttt tttttaacct 1201 tgtatttcat tttgcattca gtccaaaata ctttcgaatg tctttttttg atttttcata 1261 cggatagtta gaagtgcatt aattaatttt tgaatatttg gagactttcc agatatctat 1321 tattgatttt ttatataatt acattggtaa aagaacatac tttgtaaggc ttgatccttt 1381 taattttata aatcttgttt tatggcccag aatatggtct atgctgttaa atagtctgtg 1441 tgaacttgaa aaggagtgtt ttgttgtttt taggtgatat gctcaataca tgtcggttca 1501 gttaagataa ttaacatact ctttgagtct tctgtagcct tacatatttt ctctctactt 1561 actatagtca ctactgaggc aggggtatag aaatctataa atataattgt ggctatatct 1621 gtttttcctg gctattagtt attatttaat gtattttgaa gctatgttat tagcatataa 1681 gtaattagag gggctttaat gatggagatc aaagatcata gccttcagta cggattacac 1741 ctcaacataa agaaaacaaa aatcctcaaa actggaccag taagagacat caaaataaac 1801 agagaaaaga ctgaagatgc caaagacttc attttactta gacccatgat aaacaaccat 1861 tgaagcagta gtcaagaaat caaatgacac attgcattcg gaaaatttgc ttcaaaagac 1921 ctctttaaag tgttaaaaag caaagatgtc accttgaata ctaaggtgtg cttgacccaa 1981 gccatggtgt tttcaattgc ctcataagca tgcaaaagct ggacaacgaa gaaggaagac 2041 caaaggaaaa ttgacagctt tgaattatgg ttttggtgaa gaatattgaa tatactatgc 2101 actgccaaaa gaacaaacaa atctgtcttg gaagaagtac agtcagaatg ttctttagaa 2161 gcaaagatgg tgagactata tctcacaaac tttggacatg ttattgggga gaatcagtcc 2221 ctggagaagg gtgtaatgct tggtaaagta aagggtcagc acagaacctc aacaaaatgg 2281 attgacacag tgcctacaac aataggctca agcataacaa tgattatgag gatggggcag 2341 gataggatag tttttcattc tgttgtacgt agggtggcta tgagttggaa tcaaattgac 2401 gacacctaaa aacaacaaca acaacaacag agagagaaaa cagaaaacac agagaggatc 2461 actgaagaac tgctgaaaga caacttcccc caaatcatga aagatgaaaa gctgaccatc 2521 caagaagctc aacaaaaccc catatatgac agacctcaaa tgaaaatcac caaggcatat 2581 cataatcaca ctcgctaaaa ccaaagacaa agaaagaatc ctgagagcag cttgagaaaa 2641 atgaaaagta acacacagtg gggaaacaat aaggctaagc tgggattatt tggcagaaac 2701 catgcaggca agaagacaat gggatgacat atataaaacc ttaaagaaaa aaactgccag 2761 ccaataataa catatcctgc aaaactctca ttcaaatatg atagtgaagt taggacattt 2821 ccagataaac agaaattaaa gcacaatgta aaaaccaaac caaacttaca agaattatta 2881 aagggagtcc ttcagtctga gaacaaacaa catcatacca caggctgaat ctaggatgca 2941 ggatcgtacc agccagacac caacctagga aatgaactct caaggactat ccaaaattga 3001 aagaattaca acagggaacc agataggtta atctgaaaat gaaaacagca tcagaccaat 3061 aagagaggga ataaacagtg taggtataga accttctaat ggggaaggca aggtgatacc 3121 aagtaataat agactggttc aaacctagga agataagggt aaatttcaag gtaaccataa 3181 agaaagttaa caaacctact catcaaaaca gagaagaaaa acacaaagtc tctgtgaaaa 3241 aaaaatctac aaaaacaaaa gaaatgaaaa aaaaaaaatc cacaaacaaa aggaattcag 3301 cacaggagaa taagaggaac aaagaaaacg tcagcaccac aaaaaaaaaa aaaaaaaaaa 3361 aaactacaaa atgacagcaa taaactcaca cccatcaata attacactga atgtaaatga 3421 cctacatgca cccataaaga gacagagagt gacagaatgg attaaaaacc aagatccagc 3481 aatatgctgt ctacaagaga cacaccttag aaacaaagat gtaaatttat taaaaaataa 3541 aaggaatgaa aaaaatatat atcaagcaaa cagctaccaa aatagagtaa gtgtggcaat 3601 gcttatctca gataaaatag actttaaaac aaaatccgcc ataaaagaca aagaaggaca 3661 ctacatcatg attaaagaga caatccagca tgaaaacata accataataa atatctacgc 3721 acccaatgac agggctccaa aatacataaa acaaactcta acagcactga aaagagaatc 3781 tgacagttcc acaataacag taggagactt caacatacca ttctcagtaa agaacagaac 3841 atctagaaag aaactcagca aagatacaga agatgtaaaa ggcacgatcg gccaacttga 3901 cctcatagat atatatagga cgctccaccc aacatctgca aagtacgtat tcttttccaa 3961 tgcacatgga atgctctcca gaatagacca tatcttacac aacagagcaa ccctcaacaa 4021 aatccaaaac actgagataa tacaaagtat cttctctgac cacaatgcca tcaaggtaga 4081 aattaacaac aggaagagca aggaaaaaaa atcaattaca tggaaactga ataacaccct 4141 gcttacacat cagtgggtaa tagaagaaat cagagatgga atccaaaaat tcctagattc 4201 aaacaagaat gaaaactcat cataccaaaa catttgggac acagcaaagg caatttcaga 4261 ggaaaattta tagcaataga tgcacacatc aaaaaagaag aaagggacaa aatcaaaaca 4321 ttaattatac aacttgaaca aatagaaata gatcaggaac aaaagcccac agccaccaga 4381 agaaaggaaa taataaaaat cagagagaaa taaagagaga ctagaaaaac aatagaaaga 4441 atcagcaaaa ccaaaagttg gttctttgaa aggataaata aaaaccacta cccaaactga 4501 caaaacaaaa acagtaaagg atgcaaataa cccaaatagg aaataaaatg ggggacatta 4561 caacagactt aacagaaata aaaaggatcg taatagagta ttatgaaaaa ctatactcca 4621 acaaaattga aaacctagag gaaatggaca catttctaga aacacactac cgagccaaac 4681 taccacaaag tgatgttgaa aatctggacg acccgtaaca agaaaagaga ttgaaaaggt 4741 agtgaagaaa cacccaacaa caacaacaaa aatccctggt ccagatggct tcactggaca 4801 attctaccaa acatttagag aagagcttat accagtacta ctcaaactat ttcagaacat 4861 agaaaagtaa gtgacacttc tgaattcatt ccataaagcc agcataaccc tgataccaaa 4921 accagccaaa gataccacaa aaaaagaaac ttacagacta atatctctca taaatataga 4981 tggaaaaatt ctgaacaaaa t // LOCUS BMBL01000010 5001 bp DNA linear MAM 01-SEP-2020 DEFINITION Dugong dugon DNA, Dudu_10. ACCESSION BMBL01000010 BMBL01000000 VERSION BMBL01000010.1 DBLINK BioProject:PRJDB10190 BioSample:SAMD00237432 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Dugong dugon (dugong) ORGANISM Dugong dugon Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong. REFERENCE 1 (bases 1 to 5001) AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Direct Submission JOURNAL Submitted (21-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D. and Haga,A. TITLE Draft genome sequence of Dugong JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: D_dugong_scaffold_01 Genome Coverage :: 64X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5001 /collection_date="2019-07-17" /country="Japan:Okinawa" /db_xref="taxon:29137" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5750A" /organism="Dugong dugon" /submitter_seqid="Dudu_10" assembly_gap 959..1298 /estimated_length=340 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1098 a 894 c 913 g 1754 t ORIGIN 1 ctgttctgtc ctttactgat agaggtttgt tgaaatctcc tactattatt gtgggactgt 61 caatttctct tttcagtgct gttagagttt gttttatgta ttttggagcc ctgtcattgg 121 gtgcatagat atttattatg cttatgtctt cctgatggat catcccctta atcattatat 181 tgtttccttc tttgtatttt atggtggatt ttgttttaaa gtctgtttta tcttagatta 241 gtattgccac tactgctctt ttttggtagc tgtttccttg atatattttt tcttcctttg 301 ctttttaata aatttacaac tttgtttcta aggtatgtct cttgtagaca gcatatgtat 361 ggatcctgtt tttttatccg ttctgctact gtccgtctct ttatgaatac atttaggcca 421 tttacattca gtgtaattat tgacaggtgt gagtttattg ctgtcatttt gtagtgcttt 481 ttttgtggtg gtgacgtttt ctttgttcct cttactttcc tgtgctgagt tccttttgtt 541 tgtggatttt tttttttttt cacttctttt gtttttgtag gttttcattt tactgagact 601 ttatgttttt cttctttgtt ttgatgaata ggtttgttag ctttctttgt ggttacattg 661 aaatttaccc ttatcttcct aggtttgaac cagtctatta ttacttggta tcgccttgaa 721 ccagtctatt attacttggt attgccttgc attgctctcc attagaaggt tctatcccta 781 cactgtttat tccgtctgtt attgttctga tgttgttgtc atttacaaat taacctttct 841 tgttccttgt tgtaattctt ttggttttga gtagtcttta agagttcatt tcctctgttg 901 gtatctggct gttacaatcc agtgtcctgt attcagtctg tggtctgatg ttgtttgtnn 961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1141 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnngt tcattgagct tcttggatgg 1321 gcagcttttc atctttcatg gtattgggga agatttctgt cagcagttct tcaatgatct 1381 ctctgtgttt tctgttttct ccccctgttc tggaactctg atcactcaca gattttttct 1441 tttgattgta tctcacgtaa ttctcagggt ttcttcattt ttcttcattc ttttttctga 1501 tttttcctca aatagttttg tatccaagtg tttgtcttca atctcgctga tatgatcttc 1561 cgtcgtttca aacctgctcc tcagcccttc tttgacactg tccatttctg aaaacctgtt 1621 gtttatcttt tggatttcta attgttttcg tatgatttct tgttgtgaat ttattttnna 1681 ttattttctt caattcttcc tttttttttt ttttgtctgt attttccatg aatttgtcta 1741 ttttttcttc atttttgtct ggtttttgct tcatctcttg gataattctg aatactagag 1801 atttgaattc cctatcaggt tgttctagta ccttttcttc tactagaaag tcatctggta 1861 ttttattgtg gatgcctact ggaaccatcc tgtcctgttt ttgtgtatgt tttgatattg 1921 tctgctgtct tcggggcatt cagtagttac tttcctcatt tattgattgt agatttgttt 1981 gtttcatcct gcttttttgt ttatttggtt atgtctgaga aggcaggatg tgtattcttt 2041 gttgtttgct catctgtggg cttgatattt ttcacctccg tctccaatgg gcagggtcag 2101 tcactcaggt atggtacagc agggcaggtc cagctgaagg ggagttgctg ggatgggttg 2161 tttgtggtgt gtaccaggga atcagtgcag ggcaggttcc agtaggccat gcctgtgctg 2221 cttgggaatg tgatgttcag tgcacagtgc aggtaggcag gaagcagggg gtagattgtg 2281 atgtgtggag ctaaaatggg tatggaaaag atgaccgaga ggagagagga acaggagccc 2341 aaaacatata cacaaacaaa aaatagtgct aagggagctt actataggat tggagagatg 2401 atagactgag aaatggggaa aaaagaaaaa aatgaataaa tcaagaagct agaagtgaag 2461 aaaaacaaaa agggaataaa agagagacga caacaaaaca agaaacaaac aaaaaaaaaa 2521 aaaaaacaag aaaaaagaaa tgcccccagg gatgtccctg tgcatctgtg cagagtaaca 2581 gagtagcttt caatccatgc ctggctagaa ggacccccca agctgagaat ataaaaagaa 2641 aacaaagaaa caaacaaatc aaaacagaac aaatcagagc aaacaaacaa agaaaaaagc 2701 cccgggagtc ccaccagcat ggtggcacag gccgggaagc agtttcacag tcaagcagca 2761 tttcacagcc tttcaggaag aagcaaagat ggcacacgga gccaggtatt tgagagaaag 2821 gagggggagg tggtgagagg taagaagaaa tctaaagcag aaaaaagcaa caccgtcagc 2881 caacaaatgg cactgatgga gccagccatt gtgggtgggt ggaagccaag caacacctgg 2941 ctgaagccca tgcttcccag ccaagagact gtagcttcag gaagcagagg aggccgagtg 3001 ggggtgaaga agtgtgggag gtgggaaagc atatatcact ggttaccagt tgttctgcct 3061 gctagaagct ctgtgaagct gctttcttgt gcctcctttt gctgatttct gataggagtc 3121 caagatgccg gatccgtgct gcggtagctg ataggggacc tctgcgtgta tcactcctcg 3181 ctctctgttt ttggtcagtt tcttattcca ttcagtgctt ggctgagttc tttatctctt 3241 catttgatgt ttaggatttc aggattgaca ttttctctgt ttggcttagt ttttcagatc 3301 tttgctgtgg agggacggca tggtgctact gcctatagag ccatgttgcc tggaagtctg 3361 acttttgttt tctctatgtt gaggtgtaat ccatactgaa ggctgtagtc tttgattttt 3421 ataagtaagt gcttcaagtc ctcttcactt tcagcaagca agattgtgtc atctgcatat 3481 cacaggttgt taatgagtct tcctccaatc ctgatgcctc gtttttcttc atatagtcta 3541 ggttctggga taatttgctc agcatgcaga ttgaataggt acggtgaaag gatacaacct 3601 tgacgcatac ttttcctgat tttaaacaat gcagtatccc cttgttctct tcaaatgact 3661 gcctcttggt ctatgtacag gttcctcatg agcacaagta agtattctgg aattcccatg 3721 cttcacagtg ttatttgtaa ttttgttatg atctatacag tctaatgcct ttgcatagtt 3781 aataaaacac aggtaaacat ctttctggta ttctctattt tcagccaaga tccatctcac 3841 atcagcaatg atatcccttg ttccatgccg tcttctgaat gtggtttgaa tttctgacag 3901 ttccctgttg atacacttct gcaactgttt tgaaattatc ttcagaaaaa ttttacttac 3961 aggtgatatt taatgatata gttcgatgat ttctgcattc tgttggatca cctttctttg 4021 aaatcgacac aaatacagat ctcctccagt cagttggcca ggaagctgtc ttccaaattt 4081 cttgtcatag acgaatgagc actgccagct ctgtatccgt ttgttgaaat atctcagttg 4141 gtattcttta attcctggag cctgtttttc tccagtgcct acagtgcacc tcggagttct 4201 tccttctata ccattggttc ttgatcatat gctacctctg aaatggttga acactgacca 4261 gttctttttg gtacagttac tgtgtgtatt ccttccatct tctttggatg cttcctgtgt 4321 ctttcagttt tttgcccata gaatccttcg gtattgcaac ttgaagcttg aagttttcta 4381 actccagatc tttgcacatt tcactatata tatttttttc cccattttat gtatttcatt 4441 tgtatcaccc ctgctcaggt atttgatcag taaaaccgaa gcaaacccca acattttcac 4501 tgcatttgaa ttggagcatg ttcttatagg attcaaattc tttgggtcca tttcatagtt 4561 acttttccca gtgcctaatc cagctcattt ttggccgctt ccttttgtta gaacaactta 4621 ttcattcatt cacgattttt aaaattgtct gccaggccct atactatctt catcccactc 4681 atcagccttt tatcctactc ttggcctcac tcctcccctc tctagccatg ctaaccttct 4741 tactgtttct ttttttattc tttttttttt ttaatatttt attgtacttc aggtgaaggc 4801 ttatagaaca aatagtttct catgaaacag tagtacacat gttgttttat gacattggtt 4861 aacaacccca caacatatta accctctaat ttctcaacct tttttttttt ttttttggtg 4921 aaaatacaca tagccaaaga tacaccgttt caaaaatttc tacatacaca gttcagtgac 4981 attgactacg ctcttccaat t //