LOCUS BMBK01000001 5001 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_1. ACCESSION BMBK01000001 BMBK01000000 VERSION BMBK01000001.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5001) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5001 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_1" assembly_gap 2274..2443 /estimated_length=170 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1386 a 915 c 1036 g 1494 t ORIGIN 1 tggccagtgt cactgaaaat cggaatctta catggaattt agtataccta agtacaactt 61 aaatataaat agccacatct ggcaagaggc taccttattg gacagcacag ttctaaactt 121 tgattatcat ggggttcagg gtaatcgagg gcaagaattt gatagttaaa tttatccaca 181 acagcatcac agaaagtatg actgggaaat cagagctcta tagacctttt tttacacttt 241 tttattgttt ttagttgtga attacatgtt tgtggcaggc accgtgttca tttcagtgct 301 taagtatcta aatgtcctga tacagttctg atcaaagaga ttagagcatg accatacaga 361 gtttctgcca ggagaaaatc aaaggagaga acaacttata ttcagagtgg ggccgttcac 421 taaggaaggt gactttgagg ccatgattga ataggcattg ctaattccat tcactggatt 481 cagtttgtct ctatttcttg ctggccagta ccctgctatt gacacattcc ttcttctgct 541 cctttaatgg catgaattat cctggttcaa tcaccactct tctcactttg tctgtgtcgt 601 agtttctgta catatcagag gtcatccact tgagaagttg tgggccaggt cttctattag 661 ctgagacctt ggaaaggtat aatctgtgct tctcaagcta ggttgtgcac acaaatcacc 721 acatctcatg gaaggtcaga ttttgatctg atagttctag ggtgaagttt gagattctgc 781 atttctaatg agcttccatg tgctgccgat cccgcacttt gagcagcaag agtttatctg 841 tagcccaatt gtgttctctt aagttcccgc aactatgttt agatgaacga tcattcattt 901 ttcctggcca tcaagcctta gcattgcaaa ctctctaaag aaatttaagt tccattttag 961 ctggaaggat ttaaactttc ctgggggaga aagctatccc atgtgactta ggactgaagt 1021 ccttttagga ttctccgaag gacatactga taactctgtg tacattagac ggaaatgcca 1081 tctcctgaaa ttatctatgt gtgttggtgg ggagggtggc atgagctgga gcagatggcc 1141 aagaatagaa tagataggcc ggcgatgggt attaaggagg gcacatattg catggtgtac 1201 tgggtgttat acgcaaatga tgaatcctga aacattacat caaaaactaa ggataaactg 1261 tatggtgact aacataacaa aataaaaatt attattaaaa aaattaaaaa ataaagaaaa 1321 ctagaaaagg ttagctctgc tgaagacaga aaccatgtat acaacttcag acttcatact 1381 gttgcatttc aacattaatg atgtccctaa ggttcttgct ttcttaaagt ttagtcttgc 1441 caaatgtaat aaaatatctt atcgcagaga ctcaaaatta ctggttataa gagcagggct 1501 aaaacaacat tccagagctt tacatttggg gttttttttt ttttgttttt tttaatacaa 1561 tagtattttt ttattatatt atgttagtca ccatacagag ctttacattt gtaaacaaac 1621 aaacaaaaat acatagacca taggaataac cagattgaga caacttctgg cttttctggg 1681 tctgtaaggt agacatcaga gtgcaaacca ctgtgaattt gattctgaat tgcttttaca 1741 tttccctgca agaaattggg agtttcaaat agatttctat catctaaact gtgatatttt 1801 gtattcccct gctctagcta aaatgtcatt cctctccttt tagctctctc tgatctggag 1861 ctcgtggccc aatctattat ctttattttt gctggctatg ggaccactag cacttctctt 1921 tccttccttg tgtatgaatt ggccactcac cctgatgtcc agcagaaact gcaggaggag 1981 attgatgcca ctttccccaa taaggtgagt gggtcatacc tgaggaggga gtcagaataa 2041 gctcggttat atctcagtaa cagattagcc ctcaaactga gtgggttttc ataaaaaggt 2101 ttacttctaa ttcgcatttg catgtccacc gtgggcatag tggagaatgg gggtgagtct 2161 ctgcttcata tagtcatttg gtgatactgg ggaaagaggc tccactttct tgtacctgca 2221 ttatctggaa cttggggact aattgttggc tggggaacaa ggaattagag catnnnnnnn 2281 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2401 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnaactctt aacctgtaca 2461 atgttgtctc ttaaatataa caccaagtga taggcacata ttagcccaca ctgtttagag 2521 atccctgccc aacctggagt tccctactta tgaagcgacc tggcctctgg ggctggagtg 2581 gcctattggg caaacggtga aaccccagac caacaatgag gagacctttc cagcaacaga 2641 gggtggggct gagtataggg ttctgatccc ctatagaacg ttccatagaa ctgaaattgt 2701 gtgtccacat ttggcagcat ccaatcctac ccttctcttg ccctatttgt gttgagaggt 2761 actagtgtct cccccaatta tttgtagttt ttatacagta tagtgtttct ctctaaatac 2821 ggtgaatata attgaaaagc taggaagcag gatatttcaa ctagaagagt ttgtgaggca 2881 gaggggatat ttcttgttgt atgttcttcc atggtgcgga tgtgtgactt ctgttttgaa 2941 aggaaatggt gatttcaaca tattttactt aagactaagg gtcataggga aggaaatata 3001 aaataagata aaaacagagg gaggcaaacc ataagagact aaattataga aaacgcaagt 3061 aatgaatcat ggaactttat atcaaaaact agggatgtac tgtatggtga ctaacataat 3121 atattaaaaa atattattaa aaaaataaag tatggaaaac aaactgaggg ttcctggagg 3181 ggagggagtg gggatggggt aattgggtga tgggcactgg gtgttatatg caactaatga 3241 atcattaaat tctacccctg aaactcataa tacactatat gttaactaaa ttgaatttaa 3301 ataaaaaata aaataaaaga ttaagggtta cagtcttagt cacttttgtt aacacaagta 3361 agaaaaaaca ctacgtgggt tggatttcag gccctgttta ggggattgtc ccgacagtct 3421 cccttcgtca ttactagtgt acagatgtca gtgggccatt gaacaagtca aaggacatgg 3481 tagacagtaa aatgtccata aatgcctgtt aacaaaatac atgattctta ggtgttccta 3541 agacttcagt agtagtgtat agagtgagtc agatgttgat cccaaatctc aatgtatcaa 3601 aatctgtttc tttccttcca ggcactgccc acttacgatg cccttgcaca gatggaatat 3661 ctggacatgg tgttgaatga aactctcaga ttatacccaa tcggtggtag acttgagagg 3721 gtgtgtaaga aagatgtgga aatcagtggt gtgttcattc ccaaagggac agtggtgatg 3781 gtgccagtct ttactcttca ccgagaccag gatctctggc cagaacctga ggagttccgt 3841 cctgaaaggt atagagaacc ctggaaaggg gaacccgccc tcacattgga ggatattctg 3901 atatttcctt agtatagatg acaagcatgt ggttgtataa ttatttattt gtacatcttt 3961 ttattttaga agtattttct tattacaaaa tgatcattgt tgtcaaactt ttacaaactg 4021 tagttgagaa aaaagaaagt aatgtcatca ccagtcacat acatcattat taatcatgtg 4081 atgtacgtcc ttgtggatat ttttctatgc atatatagat tactgtaagt taggatgtta 4141 tcgtatcttt tttgaactac ttacttaatg tgacagtaag ctgtaaacaa cataccgtat 4201 ttgcgtttgt gattagatgc atataccaag atatacttaa ccattatctt atttaggaaa 4261 atgggacttt tttctcatta agttctttgc cctctctagc gctctgaatt tactcctcac 4321 attctcacat tccatctttg taaccctggg ccaccgtttc tgctagctgt agtgtgacag 4381 cagaggctgt ggagctgagt ccacatccct ggcaggagga gcggcctcct gaggatggag 4441 gtgtgcacag gtcctgtgct gtctgtggct gcagacctgt gccagctccc acccctctca 4501 gtacctgggg ttcatccaaa gcaagctctt ctgctctcta gctatgtgag agctatctag 4561 cttctgatca ttcagagcag agtctggctt tgggtgcagc ttgaattctg ctaagtccat 4621 gctttcctgt ttattgtact ggtgagcaaa attcggatga actttttagg gatctagacg 4681 tttagcccct gcttctaagc tccctgatgg cagagccctc atcctgttgc gtggtgtccc 4741 tagtgctagc aatgcaccta cacatagtac ttgctgaaag aactcaaaaa tgaccaaggc 4801 atctgttttc tggaccagga gacctgatgg ttcccacaag ctcagcattt gcctctcctg 4861 tcgcttctca aatggaaacc agagagcact cctggtactt gtctgtgatt cattcagtca 4921 tgagaggaag tgcttacctg tgtgtgtcaa ggactgtgcc aggcagtgtg gaatccatgt 4981 attgaacatg cctattatgg a // LOCUS BMBK01000002 5001 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_2. ACCESSION BMBK01000002 BMBK01000000 VERSION BMBK01000002.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5001) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5001 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_2" BASE COUNT 1278 a 1248 c 1418 g 1057 t ORIGIN 1 gagagggaac acaagcaggg ggagtgggag agaaagaagc aggctcccag cggagcaggg 61 agcccgacgt ggggctcgat cccaggacgc tgggatcatg acctgagcca aacacagact 121 caacgactga gccacccagg tgccccatca ctgacgtcat tttaacagtg aggatctggg 181 actcagaagg agtccgaggt gatgaggcca agacaattaa aacagggtgg gatactagag 241 tgtgatgggc ggggggacaa ggctacttta gttctggttg ggcagggagg gcttcttgga 301 ggaggaagca tttgagctca ggcaggagtg tggaaaagga gccagcacag ggagatctgg 361 gggagtggag gagggagtgg ggatctgaga ccctgggaaa gctcaggaag ggcatcagga 421 cacctgggtc tagatgcggg ctctacccca attcactgag ggacttttga caagttgttc 481 ctctgtctgg gccggggtct ctttgtctga agaatatggt gcgatacaca cctgcttgct 541 tcgccttgca aggtcagaac atcactggga aagaacagat ctggatgtca gagaatccca 601 ggaagcagag gcaacctggg cccctctctg cccagtcgtc atggagaagg tccctgggag 661 cagccggaga tggtgggttg gatgcgttca gggtggctga gaagaggccc tcctctacct 721 cccctcttct accaatttga agctctgcac ccagccagca tggtgggaga gagacagaga 781 cagagataaa aagagacaga gaagcacata ggagacaccc agagaggggg agacacacac 841 acacacacac acacacacac acacacacac acacacacac agagtcaggt ggagacagag 901 agatgcagag aaagcccaag acggagacag aggggaagag acagagtctg gagttaggga 961 caggtatccg agacactgtc gggtccttag ggcggctgag agtggaaaag taaagagtga 1021 gagtcacaga aggggggggg aacacagaaa aagaagaaaa aaggagagac agagactggc 1081 cgtggcagag acccccgcaa gggtggggtt gagagcccag aagtggagaa gtgcagagcc 1141 acagaacctc tcgagcctga gcacccactg tctgtgcccc aaaacctgtc tctacggcct 1201 ctggaagcct ccacggctcc tccaggacca ccagcagctc ctccgtccag cggccacctg 1261 agggcctttg gccaagccca gtggcctttg agtctggcct cctgccctgt ttattgcccc 1321 cccctccacg tgccctgggc ttacagttct acagcaatca actcgtttct tctttgcaac 1381 agcaccgttt tactaatgag gagatggagg gtcagagagg ttgagtgact cacccgaggt 1441 cacacaggaa gttaaagagg caggactgag ccttggtcct ctggctctgg gtccagggtt 1501 tcttctgtta caacgggcaa tgtgactcag ggttcccctt ggatttgcaa catgtcccat 1561 ccccgaggat cagctgggag ctgccttcct gccagaaaac tgatttatcc ttcctcagaa 1621 cttggggacc ccagatctag tctccccgat ccccgtgttg gtatcagcag caaatatgga 1681 gtgggaggag tgagcaagta atagagagag aaagtattga ttcattgaga aatagagaca 1741 gagctaccaa ggtgggctga gcgcactctc agagaacgag ccacagctca cacgggcaca 1801 cgcgcactaa gcttccgccg ccgggccgcc ggggtggggt aggagttgtc ccagtcaggc 1861 ccgaggtttc agagcttggg ctcagtctaa cagaaatctt ctcagtgccc cacatgggac 1921 acgagctgga gaatttacat gagcttcaag cagtggcgtt cttccctgaa ggtctgtgga 1981 tcagcctcaa ggacgccagc atccccttgt actccttaaa cttgggtaag cttggtaatt 2041 attacgtagc ttgttgatgg gtttaggccc atcccttggg ggtggggctc agtaggaaag 2101 gaggcctgga ttactctgca tggcggaaag gagagactat ggagctcaga ggtcacccac 2161 gaagtagaga gggtgcaggg atgggaggga acgccacctt cgtcccataa atcagatcac 2221 gaagtggaaa atcagcgggg gcttaagccc acaatgccaa gctctcagga agcacacagc 2281 cagggaggga cacgtgtaat gttcgcaggc agctgggcat cttcctgggc agaaagtcca 2341 aagcatttat cagattgtcc aaggagtcag tacgagttaa aacagacttt tgctgcagta 2401 acgaacaagc cccgaatctc agtagattaa catccgagca gatgcctttg tcccctgata 2461 cacactgcct gccaggtgac actcagggac tgctgtccct tgtaccagtg atccaggctg 2521 cttggctctt gtgtctcctc catctcaatg cccagccccc ataccctttg acatgggaag 2581 agagctggag ggtccttagc ccccaagcga cacatgccac tacccattga ctggaactag 2641 ttcacgggcc acctagctgc aaaggaagct gggagggtcg ccaacgtcat gtcatcaata 2701 tttggaggtt tcaggaaatg gatattccca ggccacagtt ttggagagtt ctgttctgtg 2761 gttcaggaaa ctgtagttta acacacctca caggtggacg tgtgcacagg tctggcaacg 2821 tctggagtgg agggtcctcc aatcagaggg ctatgagacc tgttctcctc tctttccctc 2881 ctccatgctg ccaggatggg agttcaccag tgtcctagca tcatgtccga aggcagccct 2941 tatttaaaat ttgagacccc aagactcatg tattaatacc ccctcaggcc cactgtcctt 3001 gtgggacaac tgaggtacag aatgttcacg tagctgggaa ggtaccagtg gatcagggac 3061 tgtggacccc tctcctctgg gataaagaaa aggcccgggt ccactcaatg ccccaaaccc 3121 caccccagag ggtgtgcctg cctggcagct ttgagggctg tgggacttga agacactgga 3181 agcagaggtc aggggtgtat gaaacaccct tgttatggcc agtctgctct ttgccactgt 3241 cgtccacttc tgctgggaga acaagattgg aaagacagtg ctggtttaat ttgccagaac 3301 gaataaagat aagacaaata agacagtact gagggtaatg aagctccagg ggcacataat 3361 tcatgtcccc tgaaacccag gcctccttcc atcatgacgg cctgccctgt gtttggaact 3421 gattaagcca aaacaatgac aatttattgt ctttctgtcg ctggagcgag gccggcttcc 3481 gcggctgggc ggtgggcaag cactggagtt ggcttggact ggatcatgag agcccatcaa 3541 gagccaaatg ttaaatagcc aggaattttg tgagccagct gttaaaccgt gggttgattg 3601 aaattggcca tggtgagaat atttacacaa cagaagttgt tgattcatgg cttttctctc 3661 cttttccttt tctttctttc tttctttctt tctttctttc tttctttctt tctttctttc 3721 tttctttctt tcttcctttc tttcagcggg cacattactg tatcaaggtc tttataaacg 3781 gccacatcag gttaagagga gaaagaggcc aagcttgtgt ctctctcgtg cctccagagc 3841 cccaccatgg gggcacttag agaatgtagt cattactcag catatcacta gcccttctgg 3901 acttggaacg ggtcccctag aaggggcttt ccaggtttac caaagatgga attgccactg 3961 agcccagtga caggctgggt acaggccagc tgggggccag ggtcagctgt gtgctgaggg 4021 agggcatcgt tgggctgcac agagccatgt acacggacgt gtgcacacga aggccttctg 4081 tcagtgcaca cgggctgtgt cttagtgcag caggtgcatg tcgcagggcc cacgggggcc 4141 tctttttggc ttatgagcat ctgcgtgatc taccactggt ttgtcagcat atgtgatggg 4201 cctgggaaca caagaaggta ccagtattgt tgtgagtttc cgatcactgc tgtaacaaat 4261 tacaccacag agttagtgac ttgaaacagc acaaattggt tccacaccca aggagcttag 4321 aagtccccac tccgtcctaa cgacaaggga aaagctgaac agactgaaag atcaacaatg 4381 tctcttggat ctatgagaga ggggaggatg cagggcaaac tgatgccccg cagactggag 4441 agtgggcgaa tacggggggc acggcttcct gagcagagac tcacaggtgg aaaccagtgc 4501 aggaaataag tgctggggca ggaaaccccg aaccctaacc gatgaactgt aggaggttct 4561 gtgtggacaa ctcgaggtag aatctctagg aggtccagtc acaaggcagc ccccacaaag 4621 ttctaagatt tacccgcagg agcttggcca gactcctacg gtaaatattg gagcaaaatt 4681 ccctcgggct tccagcaggg aaactggaaa agaaaccatt ctgaaatagg ccagagctct 4741 ctgttctcta ccaagcctgc cctctggaga aactagttaa ccagagtgta acctgctggg 4801 ttatcgtcag agaccgaacg agccagggaa ggaaaataca caactctaac ctattcaacc 4861 catcccgtcc caccaaaagg gggaggaaac aagtgaaaag cacgtgtgaa gttggaggtc 4921 cggaagcaca ggctccctta aagactgagc cccaatgatg ggactacaga gcgctgcccc 4981 tccccgcaca cctcgccgtc a // LOCUS BMBK01000003 5002 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_3. ACCESSION BMBK01000003 BMBK01000000 VERSION BMBK01000003.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5002) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5002 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_3" assembly_gap 1203..1411 /estimated_length=209 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3252..3315 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4377..4523 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1314 a 1018 c 1005 g 1245 t ORIGIN 1 tttctggatg attcacacac gggccaggca gttggagccc tcatccatgg cctctctatg 61 gggtcgcctt cattcttcac ccagtgccaa gttggttcca agagggagcg ttcaaagaga 121 caaaatggag aagcctgagc ttggaactgc tcagtctcac ttctatcgta ttctgttggc 181 ttcttcagtc acggagctca gactccccct gtactcggga ggtgtgacaa agaatttggg 241 gtctgtgttt tagaatggct atagcaactc tgtgaatgtg ctcttaaaat tccttctgtc 301 tttaatgttc cttcacgttc acccctcctg gccacctgga aaactactga ttctccaagg 361 cccagctctg taaaatattc ttgtctctgc gtccttccca tgttgttttc attgttagtc 421 tcgtatttag cacatcatgt taatgtcggt ggtcctagag gacaatgagc catcttatct 481 atccctcgtt ctagttccca gcatagggct tgaagtaaat aaatggacta atttttcagg 541 ctaactgtta ttataacagc taccatttca taaatgttta ttgtgtgata ggacctaaaa 601 tatgcacctt accaatatta tcttattgaa tcctcataag taggaagctg ttattacttc 661 tcttatacaa atgaagaaac taataccata gtaaattttc cagtgacaca tagccttttg 721 tagatgacag aaccaggatt tgactcccaa gttcaaagtc tatgttcaca accaatatat 781 tctcatttga atgatgaatt aaacaaccat ttctatccct ctaacattga cataaccaac 841 aactctctcg aacagttgat ctatgggctc tactccagtg ttttaggtgt aatttaattt 901 cattcctgca caccattcta cctgatccaa atatttgaat gaagaactgc tatgtggaaa 961 ggaaatgtgg atgtgttgtg tctccagagg gcaaaatcag gataacaggg tgaagacagg 1021 aggaagaggc agactggttc aacatgagga ggaactttgt aaggattgag actgaccgtg 1081 ggtggagtag gctggcacca gaagtgctga gctccccatt gctgcaggaa tccaagaaga 1141 ctttggatga ccatggggtt gttgcaggga agttgactag ataactataa tggatatgct 1201 gtnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn naggaactgt ctttccactg taaatgtcta 1441 taaattaagg taaaatacag aaaacaaccg tttccagaca ttatatttag gcagaacaag 1501 aacgcgatct ctgagaaaca gaaagcaaca aaagcgagcc ccatgcttgg tccagattga 1561 aggcgaaagg cagtttccag ggcacagtac acgaaaaggg agcacaaaga gaggctggga 1621 atcctgctga gttgagaaga cgaagttgga atttgaggat gccaagtcag cgagaatctg 1681 tgggacatgt ttctggagag gcgaagtcga tgcaaagaaa gagttcccga aacctgtcta 1741 agagttccct tcagtctctg gctgaacacc aatctatgta tatataacat gaaaccccat 1801 agggtttagc tggtcttgca gatttgttcc tgggattgac tgtatcctct aaggtttgtc 1861 tgtcagtttt taaatcatca gccagggctt tatttcagct tctttgctcc ccgtttcaac 1921 atttctttgc cacagcttta tggtgattaa tcccaataag gacagctgtg gctcaatagc 1981 tctgtagttg gtatactgtt caaaattcag tattgctaat gttaattttt aattttttta 2041 tttttatatt tttaaaagat tttatttatt tttttcagag agagagagag ggagggagga 2101 ggaacagagg gagagggaca agcagactcc atgctgagtg tggagcccaa cccagggctc 2161 aatcccacaa acccgagatc atgacctgag ctgaaatcaa gagttggatg tttaactaac 2221 tgagccaccc aggggcccct attttttctt ttttaagatt ttatttattt atttgagaga 2281 gagtgagcag gagaaggagc agagggagag ggacaagtaa actctgtgtt gagcgtggaa 2341 cccaatgtgg ggcttgacaa ggactgtaac ttctaacagt ttgttggaag acagttctca 2401 tgtttctgca tgtcttgtaa gcaaaggcac tgattgcttt tatactggac catcttttca 2461 aagattttta aaaagatttt tttaaattta tttgagagag agagagtgca caaatggggg 2521 cggggggcag agggagaggg agaaccatac tccctgctga gcaaggagcc caacacgggg 2581 cttgatcccg ggaccctgag atcatgacct gagcccaagg cagatgctta accgactgaa 2641 acacccaggc acccctcaaa gatgtttttt aaagcaaaca cacttgaaat atagagcata 2701 tctttctaga gcaaaggaca agtttgttta cagctctgga tgatcaagat tatctctttc 2761 tctggagcaa agaaaaggtg tctttcctgt ccattttaaa agaatcaggt tccccaagct 2821 ctgggttcct ctcctgtaat gcaacgcaat gcaggaggct cctgacattc tttgtgttgt 2881 tctgtgggaa tcgagactct agaaaccggc tcaacaacat gctggttctc cggctactac 2941 tactgctgtg attaagaaag tccttattct ctgggagaga ataaaagctt cccacagagg 3001 aaacctcagg tccagagagt tttgtgggac attctattca catttaagga agaaataata 3061 ctccttttat atagaagtca tttggaaaat agaagaggaa aaaaatactt cctcagtcat 3121 tttacgaggt cggtattacc ctgatgccaa aacaagacac tgtctgatgt gctgtatggt 3181 gactaacatg acataataaa aaattaaaaa aaaaaagaca ctgtcattac caacagagga 3241 agcttgcaga gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3301 nnnnnnnnnn nnnnnagcct caccaagtag tttatgccag gaatgcaaag ctggtctaat 3361 atggatcaaa taactatttc atcacgttaa aagacttaaa agtaaaaacc atgtcttatt 3421 agtctgtctg gactgccata acaaaatacc atgaattggg aggcgtaagc aacagaacct 3481 tattttctca caattctaga ggctagatgt ccaagaccaa ggttctggct gatttagttt 3541 ctggtgagag ttttcttcct ggcttgcaga cgtccacctt ctcctatgtc ctcatgtgac 3601 ccctccttag tgtggtcaca tggggagaga gagagctctc ttgtgtctct tttcataagg 3661 acactaatct cattggatca gggccctacc ctcatgacct catttaacct taattaaatc 3721 cttagagacc ccatctctga ataaaaccac cctggagtta gggctccaac atctgaatat 3781 taggaggatg ccaatattca gtccacatgc catatgatca tcaccatgga tgtagaaaca 3841 aatatttgac aaaatatacc ctacattcat gttataaact tgtaatgcat taacaacaga 3901 aggaaatcct gtttttgcat gagatgcagc ataaaaaaat ctgtctttcc gctgaagaga 3961 ccatgaggca aaatcatgcg tggagaccac agggccaatc atggggctgg aagattttgg 4021 catcctaatc agccgggtct ggtcccggac tccaccccta gtgccgaggg ctgaacctac 4081 ctcctctcag accatttagg ggtggggaag gggatctttc caagaggaaa cggacataga 4141 gttaccaaga gaattgtgtg tagatactga gtgggaaaat gacaaatgtc catgccagag 4201 accctccagt tcaacatcaa gaggaccaga atggagaaga aacttgccca atgaacccaa 4261 tcaggaagag gcaaagtcct gctcagaacc caaggcagcg gagccctagt ctgggggtcc 4321 tgctgttgcc caagtgcctg cacctccact aactcatccc aggacctgca ggtctcnnnn 4381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4441 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4501 nnnnnnnnnn nnnnnnnnnn nnngtgagag cgaggacagg ggacagggtt tgcactcccc 4561 atgccgtgtc tccgcatggt gtgcatgccg cacacacaag cgttcctgag tcccttcttc 4621 cgctctcttc tgatagcgtc cctgtctgtc cctgcaggcc cacctacagg acgtacctaa 4681 aatactaaac ctattgtgac ttaacctatc ctaagagctt cagaagcctc tcttagctct 4741 cagaatgaag tccaatatgg ttagcatgga aaataaggca aacatggctc aacctgacca 4801 gctcatgtgc tcactagccc ccttccaccc cctcccagac ccaaccttga agcactctct 4861 gctccaggca cagaaggctg ccacgcttcc ccaaacacat gcgtcactaa ctgttcactc 4921 aactgaccac ctgcacaggt ccatcctgct gtctgaactt cctgctcttc atcctccttc 4981 acctctggtg agttctgttc aa // LOCUS BMBK01000004 5002 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_4. ACCESSION BMBK01000004 BMBK01000000 VERSION BMBK01000004.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5002) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5002 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_4" assembly_gap 2578..2616 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2830..2854 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1835 a 948 c 953 g 1202 t ORIGIN 1 gtacggaggg cacgtattgc atggtgcact gggtgttata cgcaactaat gaatcatcga 61 gccttacatc ggaaaccggg gatgtactgt atggtgacta acataatata ataaaaaatc 121 attaaaaaaa aaagaatgat tgggtcaacc aggaaatcaa agaagagttt aaacaattca 181 tggaaaccaa tgagaatgaa aacaaatcag tccaaaacct atgggatact gcaaaggtgg 241 ccctaagggg gaaatacata gccattcaag cctcactcaa aaaaatagaa aaatcctgaa 301 tacacaaact aactttacac cttaaagaat tggagagaga acaacaaata aactctaagc 361 caaacaggag aagagaaata attaagatta gagcaaagat caatgaatta gaaaccagaa 421 atacagtaga gcagatcaat gaaactagaa gctggttctt tgaaagacag taagatcaat 481 aaaccactgg ccagacttat ccaaaagaaa agagaaagga cccaaattaa taaaattatg 541 aatgaaaggg gagaaatcat gactaacaca aaggaaatag aaagaattat tagaaattat 601 tatcaacaac tatatgccaa ttaagttaaa taacctggaa gaaatggatt ccttcctgga 661 aacctataaa ctaccaagac tgaaacaaga aaaaatcgag aatctgaaga gaccaatagc 721 cagtaatgaa attgaagcac tgatcagaaa ccttcccctg cccccaaaaa agagtccagg 781 gcctgatgga ttcccagggg aattctacca aacattcaag gaagaaataa tacctattct 841 cttgaagctg tttcaaaaaa tagagacaga aagaaaactt ccaaactcat tccatgaggc 901 cagcattgcc ttgatcccaa aaccaagcaa aatcccatta gaaagcagac gtacagactg 961 atatccccga tgaatatgga tgccaaaatt ctcaacaaga tcctagctaa taggatccaa 1021 cagtacatta aaaggattat ccatcacgac caggtgggat tcatccctgg gatgcaaggg 1081 tggttcaaca tttgcaaatc aatcaatgtg atagaacaca ttaataaaag acacaagaac 1141 catatgatcc tttcaactga tgcagaaaaa gcgtttgaca aaatacagca ccctttcctg 1201 attaaaactc ttaagaatct agggatagag ggaacagtcc tcaatttcat aaaagccatt 1261 tatgaaaagc ccacagcaaa ttatcattct caatggggaa aagctgagac ccttttcctt 1321 aagatcagga acacgacaag gatgcccact ctcgccacta ttgttcaaca ttgtactaca 1381 agtcctagca agagcaatca gacaacaaaa agaaatgaaa ggtattcaaa ttggcaaaga 1441 agaagtcaaa ttctctctct ttgcagatga catactttat gtggaaaacc cagaagactg 1501 cactcccaaa ttattagaac tcatacagca attcagtaat gtggcaggat acaaaaacaa 1561 tgcacagaaa ccagttgctt tcctatacac taacaatgta actgtagaaa gagaaactag 1621 gaatcgattt catttacaat aacaccaaaa accataagat accttggaag aaacctaacc 1681 aaagaggtaa aggagctata ctctagaaac tacagaacac ttatgaaaga aattgaagaa 1741 gacacaaaaa gatggaaaaa cattccatgc tcatggattg gaggaattta aacattaaaa 1801 tgtctatgct gcccagagca atctatactt tcaacgtcat cctgatcaaa ataccaatgg 1861 catttttcaa agttctggaa caaacaatcc taaagtttgt atggaaccag aaaagatcct 1921 aaattgccaa ggaaatgttg aaaaagaaaa acaaagctgg gggcatcatg ttgcctgatt 1981 tcaagctata ttacaaagct gtgatcatga agacagcata gtaccggctc aaaaacagga 2041 acatagatca atggaacaga atagagagcc cggaaatgga ccctcaactc tatggtcgac 2101 taatcttcga caaagcagga aaaaatatcc aatggaaaaa agacagtctc ttcaataaat 2161 ggtgctggga aaattggaca gctatataca gaagaatgaa actcgaccat tctcttacac 2221 catacacaaa gataaactct aaatggatga aagacctcaa tgtgagacag gaatccatca 2281 aaatcctaga ggagaacata ggcagtaacc tcttcgacat tggccacagc aatttctttg 2341 aagacatgtc tccaaaggca agtgaaacaa aaacaaaaat gaacttttgg ggcttcatca 2401 agataaaaag cttctgcaca acaaagggaa cagtcaacaa aacaaagagg caatccacgg 2461 aatgggagaa gatatttgca aatgacacta cagataaagg gctggtatct aagatctcta 2521 aagaacttct caaactcaac acccaaaaaa caaataatca agtcaaaaaa tggacagnnn 2581 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnatgg gcagaagaca tgaacagaca 2641 cttctccaaa gaagacatat gaatggctaa cagacccatg aaaaatgttc aatatcatta 2701 actatcggga aattcaaatc aaaaccacag tgagatacca ccttatacca gttagaatgg 2761 gaaaaattaa catggcaaga aacaacaaat gttggagagg atgtggagaa aggggaaccc 2821 tcttacactn nnnnnnnnnn nnnnnnnnnn nnnnaatgca agttggtaca gccactttgg 2881 aaaacagtgt ggaggttcct caaaaagtta aaaatagtgg taccctatga cctggcaatt 2941 gcactactgg gtatttaccc caaagataca gatgtagtga aaagaagggc cacacgcacc 3001 ccaatgttca tggcagcaat gtccacaata gccaatctgt ggaaggagct gagatgccct 3061 tcaacagatg aatggataaa gtagttctgg tccatatatt caatggaata ttacttagcc 3121 atcagaaagg atgaataccc accattttca tcaacatgga tggaactgga ggggattatg 3181 ctaagtgaaa taagtcaagc agagaaagac aattatcata tggtttcact tatatgtgga 3241 acataaagaa tagcttggag gacattaaga gaaggaaggg aaaaatgaag gggggaaaat 3301 cagagtggga gatgaaccat gagatactat ggactccagg aaacaaactg agggtttcag 3361 aggggagatg ggtgggggtg ggttagccca gtgataggtg ttaaggagag catgtattac 3421 atggagcact gggtgttata tgcaaacaat gaatcacgga acactacatc aaaaactaat 3481 gatgtactgt atggtgacta acataaaaca aacaaacata gtactgagga tgggaaagga 3541 actcgtcagt ggagcagaaa ttttgacagt agaaagctga tgggatcatg ttgacatata 3601 aaccagagct gagaatagaa actacaatta tgatgctttg caaagggaag actggacaac 3661 acacagaagc cacaattcat cttcttggca ggaactgtga aaacaccttg tataatgggc 3721 tgaattttta tttcccctcc caaattcttc tgttgaaatc ctaattgcca atgtgttagt 3781 ataggagata ggactttgag catgagagta gagccctaac gagtgagatt agtgtcttat 3841 gaaagagtat ccaaagtctc ccttctccct cctgccatgt gcgtacacaa tgagaagaca 3901 gccatctatg aatcaggaag gggggttctc actggacact gaaaacggct gcagtcttcc 3961 tgatcttgga cttccagcct ccagaactgt gagggataaa tttccgatgt ttataagcca 4021 cccactctaa ggtattctgt tatagcagcc tgaactaaga ttccttattg gattttaatt 4081 ctactccatg ggagaaacaa cttcccccta gtcctctggg gtccctagct ttgccttctg 4141 aaataaattt tccttatcta ttatcctcta ggccacatct gaagttggca ttggaaagtg 4201 ggcctctttg gaggttgtaa aaatttcaca gcctgctttc tgatgatgca agtttggggg 4261 cctggtggtt gttttataga ttgaaaaatt acaggcattt tcaggccagg cttgtggttt 4321 tgttgagaat acaattccat caaaatttag taagctttca gtctatttac taccagttgg 4381 ttccatgtca aaatctcttc tggtctcagt tcttaagcct gccaactctc ttttatttta 4441 tttattcact tctatactta gcacatttcc ctgttatttt aatggtggct attgtaaggt 4501 catataaaac aataggctaa ataaggaagg caatccctct actttgacct ttgttacagg 4561 gccactactg tccagatgaa aagtcttact gagaaacatt tggaagtaca ctgaccaaag 4621 gctctgctta atggggcata gctgcagttg acttttccaa cttcgagagt ccaaattatt 4681 agcttctatg tcaattttaa ttgcaagtca tagagaattt aactccctta acttccattt 4741 ctacttgtac acagtttaat tcttgcctga tatatatcta aagctaaaag caacaaggac 4801 caacaacaca taaacacacc aacattctat cctttttttt tttttttttt tggaccacat 4861 caccacatct tttagaaagc tatggcatac tcgaagagtt ggacctcata gatatatata 4921 gaacactaca ccccagaacc aaagaatatt cattctattc taatgcccat ggaacattct 4981 caagaataga ccatgttctg gg // LOCUS BMBK01000005 5002 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_5. ACCESSION BMBK01000005 BMBK01000000 VERSION BMBK01000005.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5002) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5002 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_5" assembly_gap 177..396 /estimated_length=220 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1183 a 1389 c 1110 g 1100 t ORIGIN 1 atatgtctgc tgtgtgcccc catctcacat gtccaaacct ggcttgtgag gctctctctg 61 ccctgccctc ctctcctccc caaactgtga gcttatcctg caagacccag ttcaaacgac 121 agtctctagg aagccctccc aatcctcagc ctcaagtacc aaattattgc ccataannnn 181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 361 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnntagt ctcatcttcc tccaaaaatc 421 tgaacgatct ctctgaaaca caaatttggc cattttgttt ccctgcttaa gatctttctg 481 gggctcccca tcatcttagg acagagtcca tactccccac ccagtcccac caggtccagc 541 aggtctgact cttgctgatg gcgacagcct catcaatgtc cactgtgtcc tcagcatccc 601 tcagcacagg ctgggacgga ctggcaggtt gactgagcac tggctggatg actgtcttaa 661 aggtgctgag tggcttaggg ggttggggga actatgggag agaattttct gagtgaatgt 721 ttgagttgat ccagtaggag ttgacccacc tccgaatgca ctcaggacac acctatccca 781 tgcgggggtt ttggcctcgt gtgacccttg aaaactgagg gatgcaattc cctgaaaaac 841 aagggaaata cttgtgtttt taagaaggga agtggagctg ggccagggtt gtgtttgaaa 901 gcaaacaggc acaagcagat ctcagccatg tgtatacaga gtggcccaca tgcctacaca 961 caatgccaga atgcacacac aaaatgtcca tccacatacc cgtacatggt cacatatgtg 1021 tgaatgcaca gtcagacgtc agggtggaca cacagacact catgtagacg tcctccaaca 1081 ggcatgctcc aaagcatgta ctcagctgcc cgccaacaca aagaggctgg tgtgcattcg 1141 ggcacactgg cctgcacaca caccccctgt catgtgctcc cacagacgta catgtctaga 1201 cacaaacagg tacggacacc cacttctgca cacacagaca ctccacagac aggtgtgttc 1261 ataaatacac gtaccaacac ggacacactg atacatacat gagctcagac gtgcagagac 1321 cccatgcacc tgcccggagt gacacacata cacagatgta taaataagaa gatgcacaac 1381 agaggcatct aggagaaccc actgcacaca ctggcatgaa cagaaagatc cagaaacaca 1441 caagagggtt gaaggacagg ctgacttgca gggaagacaa aaataagaca gacagacaca 1501 aggggagaaa cagatgttgg gcaaggtgct gtgcaggggc atgcctcccc accccaaaac 1561 aacccgaggg tttacccctg atccaccctc ctcacacact gcctactgca ccatccctcc 1621 agaaggccac ctccaagtca atgttccatt cacagctccg ggggaaggct cagctgtgcc 1681 aaagaaggaa gggcaggcag gttcccacaa ggctttctct cccttcctcc tttcccgaag 1741 aaaacgtatt tggtacttta gaccagagaa tataatatct gaaaggggaa tttagagaat 1801 cccttactca tgtcctgcat cctgcagatt aataggaaca gctactattt ttttggcact 1861 tactgccgtg cacttcaaac ccattaatcg atgacttctc ccataatagg ctaagagata 1921 caacctgtca ttggccccag gaggatcaga gaagcgagat gacctgttca aggtcccaca 1981 acaaagaagc aataaggtat tccaatccat gccttaactg tgctcttaac tgctgtacca 2041 ttgtctggaa agggaaactg agtcccaggg cgggaaagag attttcctgg gcactcccct 2101 aactcatcct ggaagctgtt gcccaggcac ttgcacactg gccttgcact ctccagcctt 2161 tgggggagaa ggcatgtgat gacagaaatt ggcctcactc cacgttccag ggttaccagc 2221 gaggccaagc acacttgacc tctctgttgc caagcacttt tgttggccat attccctgct 2281 cctccccagg tcacgacagg ctgtttgaac actcagtgcc ctggctggtg ccaacttcgc 2341 tgacaaacaa actcttgaaa ttctacctcc ctccttgcca aggaacagca aggggaaggg 2401 ggggcccagg catgcagcca gcccaggtgt aggctggtgt ttgggattaa ggggactgat 2461 acctgccaag cttgtgctaa tatttccctc ctctgctccc tttaaaacca ataaacaact 2521 ttcttctctg ctttgttctc tgctctttgt tccctcccca cagaattcca gcttagaggt 2581 ctagaacact ttgagcaacg tgccagtcct gagagtgcca acctcaccca cttgcacttg 2641 tccaaagtta gagctggcat ctgagcagat ggggggaggt ttccaaccgt cagatgctgc 2701 ctcgtgccca tcaggacccc tatcaggacc acggaagacc aatccagcac ccacatggtg 2761 ctcatgtcag agctggctgg gaccacctta gagctacagg gtgccaccct tatgaccccc 2821 tgaagccagc cccagtggcc accgcagcct cctctcagac cctcctggca gcagaggtgg 2881 ctctgtgagt gttctcctgg catcaagttc agtgtcaact tgccgtcagc tccagtgttg 2941 agcgggggcg agctgatgca atggcagaag ttgctagcgt acctctgtgt ccaatgccaa 3001 tgccaatccc acaccacttg ctaaacttgg tctccacttg gctgtcagta tgggctaggc 3061 cagtcagtgg aggaaggaga ggacagggtt caaatcccag ctccctacct gctacctggg 3121 tgacctcaag cagtagggag gcttgctctt ctgaacagca gatagaagat gctatgaacg 3181 gagccccccc ggctagaagg atcccatgag attacatgtc cacacactgg ctcttcacaa 3241 ttagtgctca ccaaaggcca gctccctatt gttaaggaag aaggtcactg agggaaggac 3301 agcaggaagg acatcatctt tccccattcc cattttcagc ctccagggcc tggctctctc 3361 cccacttggg acttttccca accgtctccc accgtcgctc cctctgtgtg ctgccagcag 3421 ccctgctgaa cccggaatca ccccaaaggg accttccgca ccctcgcact ccacctcctg 3481 ccctcaagtt ttccttttcc actggcgggg aaacccagcc ccagaagggg agtaagcatg 3541 cagagtggga gacacaggag cccctccctc cctctgttgt ctgtcctcag tattctcaca 3601 taccaagtgg ggaacatcag tagcactact actaacagca acaatggaaa tgatgaacct 3661 agtgagctcc cccaaggatc tgggtaggac cggtgaggct ttctgtcaat gacacccctt 3721 gagacagttg ggactatttg gcactatatg gatgcttctc attacgattt ccaagtcctg 3781 cccaggccct ctgccacaga gaccacaagt tactcttctt tactaagaaa cgttccactt 3841 aaacgtgcct ctggacttct acccctttcc caaccacaga caggtggtga cactgatcct 3901 gaccttgcgt tgaggtccca ggggggattc tgggcaccag agttcaaagc agtggcgggt 3961 caaagcctgg ggcaggtgcg gactctttga tcctgctgga ctcccatata cttcttctgg 4021 gaatagccca tgacaagcag gggtcctccc tccccccaag accctcaaat ccactccctg 4081 ggatctcccc tcccaagacc ttttttatta ttaaagtatg ctccacaccc agtctggagc 4141 ccaacgctgg gtttgaattc acgatcgtga gatcaagact tgtgcgagat caagagtcca 4201 atgcttaact gactgaggca cccaggcacc cactcccctc ctgagaccat taaatgtaca 4261 tccctcctca tcaaaaatcc caaatccaaa tccacagcca cacatgctgt ccagtttcaa 4321 cactcttttc tctctctttc ttttcttttc tttctttctt tctttctttc tttctttctt 4381 tctttctttc tttctttctt ctttcttcct ttgagagaga gcgaaggaat gcttggcagg 4441 ggggcaaggg aggagacaaa aaggggcaga gggatctgtg ggcagagggc aaagcgatgg 4501 ggaggggcag aaggagaggg aggggcagag ggaggagagg gagagagaga atcttaagga 4561 ggctcccgat ccagcccagc ttggagcctg atcttgagct tatctcacaa ccccgagatc 4621 atgaccgagc caaaatccag agtcagcggc ttaacagatt gagccacccg agtgctcccc 4681 attccaacac tcttaaaccc gcatctctgg attcttttct ctggagacct caacatctac 4741 aatgttaggg tcccttctca ctctgagacc gaaaatccaa agctcagggg gctccacata 4801 caagtattct aaactcttca gttcaggatt ttgtctactg cttcactcaa ttctatagcc 4861 ctggggtcgt ccctcctgaa ggggcagcac actctgtctt ggggcctact ccctgttaat 4921 cctcctgggg tcccctcctc ctgccatctg gctgtgtgcc aagctcagcg atgagtccag 4981 ggtggggggg gtatagctgg ga // LOCUS BMBK01000006 5004 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_6. ACCESSION BMBK01000006 BMBK01000000 VERSION BMBK01000006.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5004) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5004 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_6" assembly_gap 155..338 /estimated_length=184 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1987..2062 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2797..2910 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3556..3632 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4562..4683 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 803 a 1720 c 1254 g 654 t ORIGIN 1 gccagccgat ccaggctgcc ggcctcctgg ggtctaaccc taaccctagg tcggtcccca 61 aggggcacct cccaaggggc ctggcgcctc aacgccgggg attggggacc cccgagcacc 121 agcaccggac tcaccctgct gccccgccgc ctccnnnnnn nnnnnnnnnn nnnnnnnnnn 181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnag ctccacaagg gagataatgt 361 ggaaacccga gccgcagtgc cggactcacc ctgccgcctt gccacacccg ggccgctaag 421 ggcgccgctg gttattcatg gctaagaagg ggcagtgctt tccgagcccc cagagacatt 481 cgaaggtgcc ccgtgccaaa acgcttgtgc ctacactccc gctctccagc gccctcacct 541 cggactgctg ctccgcagac cacacagcca gccaataggg cccgccggcc tcctgggggc 601 taaccctaag cctaggtctg ccctccaggg gcccatccca aggggcctgg cgctgcaacg 661 ccagggattg ggaatccctg agccgcagtg cgggacaccc ccgtcgcccc accagcaaca 721 gagccgctag gggcgccgct ggttattcag ccaggaatag gggcagggcc ctccaagcca 781 tggcaacatt caaaggccca gggcaccaaa acgctggtgc ccacgctccc gctccccagc 841 gccctcacct cgggccgcca ctccgctcac tgcacagtgg gcggatcggg cctgccagcc 901 tcctgagggt taaccctaac cctaggtcgg ccccccaggg gcccctccca agtggcctgg 961 ggccacaacg ctggggatgg ggaccccgag cccaagtgcc ggactcaccc tgctgccttt 1021 cagccacccg agccttaggt gccccgccgg tcattcagag cgggagaatg ggcaagtccc 1081 tctgagcccc cgccctcctt caaaggcccc ccaagctaaa atgcttgggc tcatgctcag 1141 tctcgccagt gcgctcacct cggccaaacc ctccacgtgc cgaacaggcg ctgatcgggt 1201 ctaccggcct cctgggggct aaccataatg ctagattgac cctgagtggc ctctcccaag 1261 gggcctggca ccgcaacgcc ggggattggg gaccccgagc ctcagcacct gactcaccct 1321 gccgcccagc cgccacccgg gggcttgggg tgctgccgtt cattcagggc gggagaacgg 1381 gcagggccct ccgagacatg gcaaccttcg aaggcccccc gggccaaaac gcccaggccc 1441 acgctcccaa tcatcagcgc cctcacctcg gtccgccact tcactctcca cacaggttgc 1501 gaatacggcc tgccggcctc ctgggggcta aacctaaccc taggttggcc cctgaggggc 1561 ccctcccaag gggcctggcg tcgcaacgct gctgatgggg accccgagcc gcagcgccgg 1621 actcaccctg ccgccccacc gccaacggag ccgctagggg caccgctctt tattcagggc 1681 aggaaaatgg gcagggccct ccaagccatg gcaacattcc aaggcccagc gcgccaaaac 1741 gctggggccc tcgctcccgc tccccatcgc cctcaacttg gcccacaact ccgctcctcg 1801 cacagcaggc agatcgggcc tgccaccctc ctgggcacta accctaaccc taggacggcc 1861 cctgagggtc ccttcctaag ggcctggcgc ccaaacgctg gggattgggg acccccaagt 1921 cccagttccg gatgcaccct gccgccccgc cccccacggg ccgctagggg cgccgccatt 1981 cattcannnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2041 nnnnnnnnnn nnnnnnnnnn nngggcaacc ctccacgtgt tgcacagccg ctgatcgggt 2101 ccaccggcct tctgggggct aaccgtaacc ctagattgac ccctgagtgg cccctcccaa 2161 tgggcctagc tccgcaacac cggggattgg ggactcctga gccccagcgc cggactcacc 2221 ctgccgccca gctgccaccc ggggtcttcg gtgctgccat tattcaggga gggagaaagg 2281 gcagggccct ctgagacacg gtgaccttca aaggcacccc gtgccaaaac gcccgggccc 2341 acgctcccgc tccacagaga cctcacctca acccaccact cctttcgctg cacagctggc 2401 ggattgagcc tgcttgcata ttggggtctg aacctaaccc tgggtcagcc cccgaggggc 2461 ccctaccaag gggcctggtg ccgcaacgcg gtggattggg gacccccgag cctcagaact 2521 ggactcacct gccaccctgc cgccacccgg gccgctaagg gcgccgcagg tcattcaggt 2581 gggagaactg gcagggcctt ccgtttcccc tgcaaccttc gaaggccccc cgctcaaaaa 2641 agttggcacc catgctcctg ctcgccagcg ccctgaccta ggcccaaccc tctgcatgcc 2701 acacagccgc tgatcgggcc caccagcctc ctgttggcta acagtaaccc tagatcgacg 2761 cccgaggggc ccctcccaag gggccgggtg ccacaannnn nnnnnnnnnn nnnnnnnnnn 2821 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn tccgccactc cgctctccac acagctggcg 2941 aatagggcct gctggccacc taggggctaa ccctaactct aggttggccc ccgaagggcc 3001 tctcccaagg ggcctggcgg cccaatgctg gggattgggg acccccaacc ccatcgtcag 3061 ttacaccctg ccgccccgcc ccacccggac cgctaggaac accgccgttc attcagggtg 3121 ggagaacggg ctgggccctc cgaaccccca ccgaccttcg aaggcgcccc aaatgaaaac 3181 gattgggctc aggctcatgt tcaccagccc cctcacctcg gcccaactcg ccgctcgacg 3241 cacaggtggt gtataggacc tgccggactt ctgggggcta accctaacca taggtcagcc 3301 cccctggggc ccttcccaag gggcctggca tcgcaacgct ggggatgggg acaccgagcc 3361 caagtgccgg actcaccctg ctgcccttca gccacccgag ccgctagggg cccaccgttc 3421 aatcaggtca agaaaacagt tagggccctc cgagcaccca ctgacattca aaggcccccc 3481 gcgctaaaat gcttgggctc atgctcaggc tcgccagcgc cctcacctcg gcccaaccct 3541 tcgcgtgttg cacagnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngccccaac gccagggatt ggggaccccg 3661 agcctcagca cctgactcac cctgccaccc agccgccacc cgggagcttg gggtgctgct 3721 gttcattcag ggtgggagaa cgggcagggc catccgagac acggcgacct tcaaaagtcc 3781 ccctcgccaa aacacctgag cccacgctcc cgctcaccag cgccctcacc tcggtccaac 3841 actccagtct ccacacagct ggcgaatacg gcctgccagc ctcctagggg ctaaacctaa 3901 ccataggttg gcccctaggg gcccctccca aggggcctgg cgccgcaaca ctggggattg 3961 ggtatacccg agccgcagcg cctgactcac cctgccgccc tgccaccacc tgggcagcta 4021 ggggcgctgc cggtcagtca gggaggagaa tgggcatggc ccaccaagtc cccggaaaca 4081 ttcgaaggcc ccggagccaa aacgcttggg cccaagctcc ctcttgacag agacctcacc 4141 ttgacccacc cctccattca cggcacagca ggcggattga gcctgctggc gtcctggggg 4201 ctgaccctta cttaggtcag cccccgaggg gcccctccca aggagtctgg caccacaacg 4261 cggtggattg gggaccccca agccccagcg ctggactcac ctgccaccgc gccaccaccc 4321 aggccgctag gggcgccgcg ggtcattcag ggtgggagaa ctggcagggc gttccatttc 4381 ccctttgacc ttcgaaggac ccccgtgcaa aaaaggtggc tcccacgctc ctgctcccca 4441 gcgccctcac cttggcccgc ccctccggtt gctgcagagc tggtggatag ggcctgccgg 4501 gctcctgggg gctaactgaa accctaggtc ggccccatgg ggcacatccc aaggggcctg 4561 gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4621 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4681 nnntcagcac agcgggtgga tcgggcctgc ggcctcctgg gtcttaaccc taaccctagt 4741 tcggcccctc aggggcccct cccaagggtc ctggtgctgc tacactgggg atcggggacc 4801 ccaagcccca gagccagact caccctgcct caacgccgcc acccgggccg ctaggggcgc 4861 cgccggtcat tcagggcggg agaacggaca gggccctgga gaaaccggtg acatttgaag 4921 cctcccacgc caaaatgcag gggcccacgc tcccgctcgg cagcgccttt acctctgccc 4981 gcccacctct cgccgcccag ccag // LOCUS BMBK01000007 5004 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_7. ACCESSION BMBK01000007 BMBK01000000 VERSION BMBK01000007.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5004) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5004 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_7" assembly_gap 965..1071 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1071 a 1130 c 1536 g 1160 t ORIGIN 1 gacacatccc taactcccta gccacttctc tctataacgg tggagtggtg tcaggtgtat 61 gtggccgggg ggaggtgagg ggacgtgggg tagggctgtt ggaaagggga tggttggggc 121 agagaagggg gctgaagtct cccaagcctc acattttgct ttgggcccca gaacaaagct 181 cagaggcagg cacagggtcg gtttggtggt gggaggaagc tgagagcttg gagttgaatg 241 gacctgggct tgagttcctg atctatcact taatagttgc gtggccttgg aaaagtcact 301 tgacttcacc gagcctcagt ttctttacaa gtaaatgggg ttgatgataa aactctctac 361 ttcatacaat tgttatatta aaaccgatat aatgcttaac ataggtcttg gcacatcaaa 421 agcctttagt aaatgtgagc tattgttttt ttctgtatgt tgcttattct tctgatatat 481 tgaagaccaa gtataaaagg attttagttg ggacgttacc cagttgtcac tgacaatttg 541 cttttcagct tgggatgagg tttattccta gaacaaaacc caaaatgcgt gggccgagcc 601 tggtaagtgt ccatcgggga ggctcgcctt tattgtctga gtcacgtctg gatgcacgga 661 gcccctgggg gcactgagct tctttgagga ggtctgaaca tgcaagaatg aagcaagagt 721 tcaatcttgg gaaaggttgt tggaatccaa agcacaggtt ctagaaaggt ggagtctggg 781 tggtctcaga gcagtccttc ggtgggagaa agacagtgtg ggagagccgg gctaccagga 841 gaggggtatg accatcccac gcatcactga ttactgatat atagcctgga cactgtgtct 901 cctggacggt gagctgctcg tggttgaggg catgctgtgg gaaactgtac ctacagcctg 961 gaccnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nttctttctt 1081 tctttctttc tttctttctt tctttctttc tttctttctt tcaagattta atatttattt 1141 gacacagaga gagagacagt cagcaagaaa gggaacacaa gctgggggag tgggagagga 1201 agaagcaggc tcccagcgga ggagcctgat gtggggctcg atcccagaat gccaggatca 1261 cgtcctgagc caaaggtaga cgcttaatga ctgagccaca caggcgccct tgggtcttgg 1321 ttttctgacc tgggaaatga gagggtagat gttccctgag ataccttcca ttgctgcctc 1381 tctgtggctg ggagatggcg aaggaggaat aatcggttca ggtttggcag ctgccttttc 1441 tgcatctcac ggtgtatccg ccttgctgct ctccctgggc ccccgcggac attctggctg 1501 ctacctgatg gtgcagacct ccacagtttg tgggcatctc agtcaccagt actggttact 1561 gtgaaaattt tctcttcatc tgcctctccc tgcacatcca cgaggatgag tttcttattt 1621 ctctgcttgc ctttcattca tgccagtggc gccattaggt cattcatgcc cgcagtcact 1681 cattcgttta ttggctcatt cactaggtac caggcacagt gctaagggca gaggatacat 1741 tgagagagca gtgggcattg tcttgtgctt gtggagtgag catgatgtcg ggagagacaa 1801 atctggtgac aggtgtaatg agaaaggaca agctctgcac agggaggggc agggagagtt 1861 gatggggaag gggggcagaa agatctcttt gaggatgggg catctgagct gagacttgaa 1921 tggtaagtag gagtgagaga agagaaggaa gcaggtgtac gtgttgggga aggaggggaa 1981 agggggtaca ggaggagtga ggtcagctcc atgagggcaa ggattcctga cccttgttca 2041 cggctctatc ccaaagtctt aaatagtagg ccctcaatga atagttgttg aatgaaagaa 2101 taaattgagc cacacaggtg aagtgaagcc tttgtggcag aaagaggctg aaaggagggg 2161 agtgtccctg cattgcacga agaagtgaga ggagaagtct gggcgggtgg gaggctcacc 2221 cagtctggat tctcccagaa gcagatgctg agacagggat ttgggtgtat gtagccttta 2281 tttgggaagc acgtctgagg gaacggggga ctgagaagaa aagagagaaa agccaataaa 2341 tacagggggg cttgatgatg gggcctggga agaggggctg aatttcctgg agacccctga 2401 ggagtctggt ggaccctgcc ctcccaggct gtgggggtgg gtatttatcg gggagtctgg 2461 ctctcactgg ctgaggagtg tccctgggcg tgaaatccct ggcatggcgg ctgccctgcc 2521 ccagggtgtg ctatggacag aaggcctcag gcagcgagct gccacccccc accccagctg 2581 caggggagcc tgcacaacgc cgactgggtc tggggtgtgc tgcagagggg acgcagggtt 2641 cccaaggaca gagggtgctt gctttgagga tggtggtggc attgcatgtg gggagaagcc 2701 ggcaaacctg aggtcctctt cggacgtgga aagtgattac cagtagagag ccaaggctct 2761 ttctttcttc ccctctccct ctttcattcc acaaatgcgg attgttgccg tctggcttcc 2821 tggcaagtga ctcggaggct aagtttgtgg agcaggctgt ttaaggatcg tccttgggtc 2881 acacctgtgg aaaggaggga agcgatgctg gaatggggca aagggaggac catccgtggc 2941 cgtggccaag gccaacccca cgggcgcttt ggagctacac ctgccctctg ccgctgccct 3001 ggatggggcc cagaactgca cctgcctcag cccagggatg ggggcccacc tgggaaaggc 3061 ctgggtgact gtgggccagg cagccctcgt cagctgaggc gatgctttca cagtgtccct 3121 cgcagttccc aagagtctcg cgtgtcaggt atggccatag ctttgggggc tgcagcggtg 3181 aacgagaaag aacggatcaa gggagaggca gaaacgagca aacatatata atatcaaaca 3241 gtcagaagtg caaagcggaa aacaaacggg gtgagctgag gatggctggg ccaggagggt 3301 gaaggtgggg atggaggcga tgcactcttg ggagaggaaa gctacctgac cttgacgctt 3361 taggggcagg cagcctctcc ctgcagctgc cagccgtcca tctctctgcc acagttcctg 3421 cctctttgca cggggtaggg gcaccacccc ctcccccgtg ggaaatttgc cctgggaccc 3481 gctgctttct tgtcagtggg cagcctgggg ttttaggagt tgggggatgg gattggcagc 3541 tttctcacta ctgctgctgc cttccacctg gaacagctgg cacagcctcg ggcctgatca 3601 ttattaaccc agggaggggg gtagattggc agaatgcaca cctgggcccc agccagggct 3661 gtcgctctgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt ccgtcctcac 3721 gcgtgtcctt ggcccacctc acctgggcag gtgcctgcag gggaccgatc ccctgccccc 3781 tattgggggc cagggatggg ggaggcaccc ccagccagcc cagttccacc tgctgcccta 3841 cccccaccag gcccttgggt tagcagagga aggtcgagct gtacagccag cagcgggggg 3901 agtcggggcc gcgcttgtct gcgcggtcac ggattattag ggtcgcattg gcgggcgcag 3961 cctccgcctg ggcaagggcg cgacgacttg ctgactggcc tcccaggggc gggggggcgc 4021 cagtcctcgg gcgcagcagg cctgggggtc gtgtcgccgc tcccggcagg ggagggtgcc 4081 gtctaggagg gtcgggagcg gggtcccggg agccgagggc gccaagggcc ggggagagga 4141 gctctggccg ggtttcccgt cggaagcccc cgccactgcc cgcgccacac cccgaattgg 4201 caaccagccc ctctgtttct gacacgtcgg gtcggcttct ggtgacggca gaaatgagca 4261 gtggcatggt tgggtgaaga cttttggaag atccagccct tgcccacatt aggaaataaa 4321 aacagtgctg actcgtaaaa taaaggtagg gaagacaaag gaagttttaa cttttggtgc 4381 gggtgttcgt ggtggcggcg agcagtgctg ctgccgtcca agccggggct cctaaacagc 4441 tctgggttga gggcttcctc ctcctcttct cccttcgctg acttccttgg ggctgggctg 4501 gcagaggcca ctgggacttt ttagtgttgc agcacttacc aaataaaagt accagttaaa 4561 tttgaatttc agataaagga actttttttt tttaaagtgt aagtatgtct tatgcatgat 4621 ttgtgaaatg cttatgtaaa ataattcatt atctgaaaat tgacagattt ataaagttta 4681 agtatgtccc aaataataca tgggacatac ttacactaaa aattggtcat ttatctgaaa 4741 gttaccagaa attcaaattt aattgacatt ctggatttca tctggcaacc cttcttgagg 4801 gtcacatatc ccgtgtccta tcatgtccag gaaaccagga aggatggaca gggccttcag 4861 agcgtttgga ccctacccgg ccctactccc agcattgtga gagctcccta agctgcttct 4921 gagttcaggc tctggctcag aagtgggttg tgggtgttga attaggaacc ggaagacctg 4981 ggctctgagt ccctgccctt ccaa // LOCUS BMBK01000008 5006 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_8. ACCESSION BMBK01000008 BMBK01000000 VERSION BMBK01000008.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5006) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5006 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_8" BASE COUNT 1658 a 918 c 874 g 1556 t ORIGIN 1 ctttaaaaaa aaaaaagaaa aggaaaatcg tgaaaaatca aaaaagtcaa ttatgcaact 61 tagtggaaga gagattcata attctttctg cctaaaacag gggggaaaaa ccataagaaa 121 ttatcaaaga atttgtgtaa atttatgtat cagaaaggat tttgggggtg cctaaatggc 181 tcagtgagtt aagaatccta cccttgattt tcagcttagg tcatgatctc agggttgtaa 241 gatctagccc tgcgttgggc tccgtgctag gcacagaact tgctgaagat tctcttaaga 301 ttttctctct ccctctccct cggctcctcc ccccaccccc agctcaagct cttgcactct 361 ctttctctaa aatcaatcaa tcaatcaatc aaatagaaag gctttttaat tatagttatg 421 aagattcatt ccagttattt taaatataaa ttaatttact aagatgtgtg aaatcaatcg 481 gagggtcaag caattccagg aaaaattcct agaggcatgt agcctagttg cacaccttga 541 gaaccagtgt gcctgccata agagtgaagt agcagaatat gacagctgca acccgttatt 601 ggactcacat ccatcctacc tttgctgtaa aaataaatta tttaatagga aagtctgttg 661 gtaaatgagg agcaacatac ctgatcacaa gcaatcacct gattggtaac agaggagagg 721 ccctgctgca attcagtggg caatgattta ttttcaataa atagtactta gccaattaga 781 tatctacact aaaatataca taaataaacc ataatcctta ctttactcca tgttcaatga 841 ttaatttgag atggatcata ggcctgaaca tgaaagaaaa agaagaagaa gaagaagaag 901 aagaagaaga agaagaagaa gaagaagaag aagggaactt gtttgaagaa accacaagat 961 agtatcacct tgactgttaa taggattttt taagaaagat aaatgtccta aaacaaaaga 1021 tagataaaat ggatttcatt aaaatttagg atgaacttta tatcaaaaga ttacattaaa 1081 actgaaaaga caacccacag gattggagaa atattctcaa ttgatataac tgaaaaatgc 1141 ttctatacag aatatataaa atatagttat aatgaataaa aaaagtctat aggggcacct 1201 gggtggctca gtcgattgag catcgaccct tgattttggc tcaggtcatg atctcagggg 1261 actgagctcc atgttgggct tcactctcag cagggagtct gcttaaatat cctctccctc 1321 tgcccctccc cccactcaca cacagtctct ttctctaaaa tagatagata atgtttttaa 1381 gactataaac ctaatttaac agtgggcaaa attcttgatt gcacacttta aacaaaaaaa 1441 aataccaaat ggcctataaa tatttgtaag aagtgctcaa catcatgatt tataagataa 1501 atcaagctga acccacaata agatactaat ccacaccatg ctagtaagaa ttttaaatgg 1561 acagacaaca tcaagtgttg ttgaaaacat ggagctatag tatctctttc acattactgg 1621 tgggagtacc aactgggaaa atccaataaa ataaaaatat gtacattctt tgattctgca 1681 aggtcacttc agtcttttaa ggttcacagt gacctgaaaa tgttgttgga cctggactag 1741 gtgcctgctg catctggagg aagggatcat cgtcacactc tggattttag actctacaaa 1801 ttcttgctcc cttttcgcct ctttcttgct ttcaaacttg cttatttttt ttttcttatt 1861 tctcccagta tgtatggttt ttctcaggag gagttttggt acaaaatgac cttaggctac 1921 cattgagaga agggtcaagt actttttcat actgagatag ttgagagtta aattaagaaa 1981 tcaaactcgt attgattttt attcacttct ggaaatatac atgcttaata tttcatgtgc 2041 ttataacatg taaggggatt tggcataata gagaatctga cacataagcc tatctcctgg 2101 gggtaccagg agataggatc actgggacct tcttaggggc tgcataccat acctgagata 2161 cttcatagga aaataaaaaa caaagacctt ttttttcccc ctcaagcatg cagaattttc 2221 tgcacactgt agcaaaaaaa aaaaaagaaa gaaagaaaga aagaaagaaa gaaagaaaga 2281 aagaaagaaa gaaaatgact gctggatatt ctctttagtc aattgcctca ttactatcct 2341 tttcggtttg ctatgctagg cacctgatgg tcatgacttt ctacgtgtca aataaatggg 2401 acaactactt gtaagacact caaacacatc gtccgtttgt tgcctgcact tactgtgttg 2461 aataggaaaa tatatgtctg cataggttga ataagagaag gacaggccaa gtgcagatga 2521 catttgtgcc ttctcactct tcacttcatt tatgattctt ccacatcatc atggtgtgac 2581 cacaagcttt tttttttgtt tgtttccctt ctgcttcact ccgactgagt ttccaggact 2641 ggcagtgaac tcggacagat ttaccttcca aagacaacac aaatgtaggt gaatccttaa 2701 ttgtgtcttg tttgtcttga ggaatgttct ggtccatctt ctttttcctc tcatccatgt 2761 tccatcccca cccaagcact caggtttcct tttgctaatc catcctgctt tgtgcctctg 2821 tctgtgtcta tagtaatttc cctttcatga aacgtatatt cagattttcc tgtctcctcc 2881 tttggataaa tggagaccga ctaattaatt caccaaagtc tgagtctaag atcagtaaga 2941 accaggttaa aataaatagt ccagatgtca gctgtctgtc acccacaagt tctagtgctt 3001 caaaccaaca cagcaataca tgtagggacc ttgagtattt tgagagtcct acaaacagca 3061 agacatttgg caaatatccg aagctataag atcagctata aataagctta attggactga 3121 agaatataag tcagcagaaa acgtagggtt tctagctttg tttgattaca tattccaggg 3181 cattttactt gactgagagg agaaatacat attttaaatg aggatattta tttaaatacc 3241 atgtcagtgt attctacaca caacggtaaa ttttaaacat aggattgaca cacattctaa 3301 ttcttagtct gtcacaaagg aaaatttttc attaatataa taaatattaa ctaattaatc 3361 attgactagt gaataaatat ttagcatgtg tctatcacgt gatagatctt gtatcaagta 3421 ttggcaacgc aaggacctcg acaaagaaat ctgtcctcac ccagcgtaca ttttaatgtg 3481 ttactatgca atttgaatct actccattaa ggtgggtaaa tagttattga gtgtgctact 3541 taattaagtt tatgttaagt aggaagccat ggtttggaga aagaaaatca caaatgctag 3601 acaggaaaga tttaagatat tttgtcatct tataaagtac caagaacccc agaggagcca 3661 tagactaata aatacaaaat taatatataa tcacatttaa aaatatgtgt attaaaagca 3721 aaatagatat tctgacacct gaaaataaat caagagttct acatgcaagg accttggaag 3781 ttgtctacct ttctaacaac aagtaggaag gtgaagagac tgaaaatcag cattgtcttg 3841 tccgtgaggg agggaaaaac gcatgtcctc atagtaggag acatagacag gtgaacaaag 3901 gcagtcatgt cttaccagag aaaagaaagc catgggaact agtgccatgg taggaaaacc 3961 tgaaatgcag ttggtgaatt gctagaggct cagtgtagac aactccaagt taaaaagtcc 4021 aaggagaccc atttttgaag ggccccaaca attttgtagg aaaatgctga taacatgata 4081 ttttaggtaa atgatgttgt atatgcaata ttctgttaga attaaaagaa aacctttact 4141 cttacagaaa tcgtgggtac cataaagaat atgataaaat aatccccgaa gtcagtgtaa 4201 cagaacactc aaaactcata cattaatatt gtttaagaaa attcggtatt taggcagcta 4261 ttttatatgc aatgatatga aggtcattga gcaatttatt taaagtttgg aaaaactatt 4321 gtttactaat tgcttctatt ttggtaattc tctctttatt gctctttctt cttatcatat 4381 agtcacttat taactcccaa aatgtcactc tgactacagt atcacttttc aaagataatc 4441 caccactttc tgtgtcctaa aatataacag ccttttccat gttcctatca gttcagtccc 4501 tttgcagtat ttgagactaa tcagcatcat cttcccccta aagatggctt ctcccttggc 4561 ttttgtgata gactttcttt ggttacacac ttttcatttc tgatcaatga cttccacaat 4621 gacttccaaa tccagctcct gccagcacta tccctatttt atgacctttt atgaatctat 4681 atcttatctt taatcagatg ttcttgattt gcttgatatg tatgcccttt gctttctacc 4741 accgtatgca tcctaatgat cttgtttgcc aggaaaattt ttacttagtg cttaagattt 4801 aggtgacaag acgccttcct ttgaagtttt cctttacttt tattggtata tttaatgcac 4861 ggggcctttc acatgtctgc atttcccagg acacagaaac aactttggca catgtgatca 4921 tttaaatcac acaattgaac aatcaacttt attttatttt atttttttat ttttttaaaa 4981 gattttattt atttatttga cagaga // LOCUS BMBK01000009 5007 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_9. ACCESSION BMBK01000009 BMBK01000000 VERSION BMBK01000009.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5007) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5007 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_9" BASE COUNT 1750 a 918 c 1065 g 1274 t ORIGIN 1 ttcaacaaga tcctagccaa taggatccaa cattacatta aaaggattat ttaccaccaa 61 ctggggattt atttctggga tgcaagggtg attcaacact caatcaacaa tcaatcaaca 121 tgatacatca cattaataaa agaaagcaca agaatcatat gattctctca attgatgcag 181 aaaaagcact tgacaaaaga tagcatcctt tcatgattaa aatggtccac aatgtaagga 241 tagagggaac attcttccat atcataaaag ccatctatga aaagcccaca gcaaatatca 301 ttctcaatgg ggaaaaactc agagctttcc ccctaagttc aggaacacca caagtaggcc 361 caatctcacc actgttgttc aacatagtac tagaagtcct agcctcagta atcagacagc 421 aaaaagaaat aaaaggcatt caaattggca aagaagaagt caaactctct ctcttcacag 481 atgatatgat actttatgtg gaaaacccaa aagactccgc ccccaaattg ctagaattca 541 tacagcagtt caacaatgtg gcaggataca aaatcaaagc acagaaatca ggtgcatttc 601 tatgcactga caatgagata gaaaaaagag aaattaagga atcaattcca cttataatag 661 caccaaaaat cataagatac ctaggaataa atctaacaga agaggaaaaa gacaatcgtc 721 atatggtttc actcatatac ggaacataag gaatagcaca gaggaccatg gggaggggcg 781 ggaaaactga agggggagaa atcagagagg gagacaaacc atgagagact ctggactcca 841 ggaaacaaag taagggttac agagggaagg atgatgggaa gataggggtg gccaggtgat 901 gggtgttaaa gagagcatgt attgtgatga gcattgggtg ttataagcaa ctaaggaatc 961 attgaacact acatcgaaaa ctgatgatat actatatgct ggctaacaga acataatatt 1021 ttttttaaaa ggatctaaac tctagaaact acagaagagt tatgaaagat attgaggaag 1081 ataaaaagag atggaaaaat attccatgct catggattga aagaataaac attgttaaaa 1141 tgtctgtgct gcctagaaca atctacactt ccaatgcaat ccctatcgaa atatcattga 1201 catttttcac agagcaggaa caaagaatcc taaaatttgt atggaaccag aaaagaccct 1261 gaattgccag gggaatgttg aaatagaaaa ccaaagctgg aggcatcaaa atgcctgact 1321 tcaagctata ttgtaaagct gtgatcctca agacagcatg gtattggcac aaaaacagaa 1381 acatagatct gtggaatgga atagagaacc cagaaatgga ccctcaactc tgtcatcaac 1441 taatctttga caaagcagga aatactatcc aatggaaaga aaagacagtg tcttcaacaa 1501 atagtgctgg gaaaattgga cagccagatg caaaagaatg aaactggacc atttccttac 1561 accataccca aagataaact caaaatggat gaaagacctc aatgtgagac aggaattcat 1621 caaaatccta gagatcatag gcagtaacct ctttgacact ggctaaagca acttgtttca 1681 agacatgtct caaaaggtga gggaaacaaa ataaaagaat gaacttttgg ggcttcatca 1741 agattaaaag tctctgcaca gcaagggaaa cagtcaacaa atctaagagg caacccacag 1801 aatgggagaa gatatttgca ccccaatgtt tatagcagca atgtccacaa tagccaaact 1861 gtggaaggag ccaagatgcc catcaacaga tcaatggata aagaagacat ggttcatata 1921 tgcaatggga cattactcag ccatcggaaa ggatgaatac ctgccatttg cgtcgacatg 1981 gatggaactg gaggggttat gctaagtgaa ataagttgag cagagaaaca attattgtat 2041 ggtttcactc atatgtggaa tataaagaat agcacagagg actatagggg aagggaagga 2101 aaactgaatg agaagaaatc atagagggag acaaaccata agaggctcta gactcaggga 2161 aacaaattga aggttacaga agggaagggg gtgggcgaat gtggtatctg aatgatgggt 2221 attaaggacg gcacatgatg tgatgagcac tgcatgttat acacagctaa tgaattgttg 2281 aacactacat cagaaactaa tggtttactt tatgttggct aattgaaaat aataataata 2341 ataataataa taataataat taataataat aaaaagataa ataagataaa ctgtgagtgg 2401 agggatcgtc cataagccat ctaccagcaa gtaatctagc aaggagtgca gaatcggaac 2461 ttttagaagt ctgcccctat gagggacatc tttgctttaa agaggctcag gtggcaaagc 2521 agggtggaat cttaggttgg acagtgtggt ctcataatcc ctggggtcac ggaaggaacg 2581 ggggtgcctg agtgcggcag atttctcaag ctttcgagca gggaagcagg ccaaatgcag 2641 caaaccttgg aatgggctct ccactcagtg ttgccataaa ccatgaactg cagcaggatc 2701 ggatgaccgc tctccacgta ggggccctgc aagcagcaga acctcggtga gacccctttc 2761 ctttccctgg gtggattggt gcaggtgcgc cgtgcaggag tctgcagttt ggcgcacaca 2821 aagtgaatga gtgcattacc ctgagggtgc attgaagagt aggggggagg cgattgttca 2881 gctccagggc tggagatcag ggcaccacat ttttatttgt tcttccttcc tataaagtgg 2941 tgtgggaagc cttcaaacag aagccatgta gagcaaccag aagcagctta cactgatctt 3001 gggcccctgg ccagggagat gcatctcctc ccagggaaag aaaacctgag aatctgtaca 3061 acaggcccct cccccagaag accagcagga acacaggcta atactaagtt tacggataac 3121 acagaaatga aaaattcctg cactagagga cagtgtatat aaaattcaag tttttttccc 3181 atgattcttt agcctttcag cttaaaatta tcttttgttt tctttttaat tatttaaatt 3241 catttagcca ttttaaggta catcattagt ttcagatgca gtgttcaata atttctaagt 3301 tgtgtataac accgagtgct catcatatca catgccctcc atcctccacc caactcccct 3361 ccagcaaccc tcagtttgtt tcctttatat aagagtatct catggttttt ctccctctct 3421 gattttttcc attctgtttt ccctcccttc ccttatgatc ctctaccctg tttcttataa 3481 tccatttatg agtgaaacta tatgataatt gtctttctct gcttgactta tttcattcag 3541 cgtaataccc tacagtttca tccatgtcga agtaaatggt aagtattcat cctttctgat 3601 ggttgagtat attccattgt acatatatac cacatcttca tccaaccatc tgttgatggt 3661 catcttgtct tcttccacag tttggctatt gtggacattg cctaatgaac attggggtgc 3721 atgtggccct tgttttcact acacctgtat ctttgtcata aataccttgt agtgcaatgt 3781 acttgagaaa caaataatca aatcaaaaac tgggcagaag atatgaacag acacttttcc 3841 attgaagaca tacaaatggc taacagacac atgaaaaaat gttcaaaatc attagccatc 3901 agggaaattc aaatcaaaac cacattgaga taccacctta taccagttag aatggcaaaa 3961 attgacaagg caggaaacaa caaatgttgg agaggatatg gagaaagggg atccctctta 4021 cactgttggt gggaatgcaa gttggtacag ccactctgga aaacagtgtg gagatccctt 4081 aaaaagttaa aaattgagct accctatgat ccagccattg cactactggg tttttacccc 4141 aaagataaag atgtagtgaa gagaagggcc atatgcaccc caatgttcat agcagcattg 4201 tccacaatag ctaaattgtg gaaggagccg agatgccctt caacagatga ttggattaag 4261 aaaatgtggt ccacatattc aatggaatat tactcagcca ttggaaagaa cgattaccca 4321 acatttgcag caacatggac gggactgaaa gagatgatgc taagtgaaat tagtcaagca 4381 gagaaagaca attatcatat gacttcactc atttatggaa caaaagaaat agcaggaaga 4441 tcagtaggag aaggaagtta agaatgaagg ggggataaac agaaggtgga atgaaccatg 4501 agagaatatg gactctggga aacaaactga aggcttcaaa ggggaggggg gaggggattg 4561 ggataggcca gtgatgggta ttaaggaggg cacatattgc atagagcact gggtattata 4621 tgcaaataat gaatcatgga acactacatc aaaaattaag gatatactgt atggtgacta 4681 acataataaa aaaattatta aaaataaata aataaataaa taaataaata aataaatact 4741 ctttaacctc tatgtgtttg agtttctttc aaatttcctg ttgtgattga gttcaagttt 4801 caaagcattg tggtctgaaa atatacagag cataattcca atcttttggt attgactgag 4861 acgtgatttg tgacccagta tgttatctac tctggaaaat actctagaag aatgtgtatt 4921 ctgttgtttt aggatgaaat gctcttcgta tatctgtgat gtccatctgg tcccttttgt 4981 cattcaaaga tcttgtttcc ttgttgt // LOCUS BMBK01000010 5007 bp DNA linear MAM 22-AUG-2020 DEFINITION Ursus thibetanus japonicus NIES_3610M DNA, Urth_10. ACCESSION BMBK01000010 BMBK01000000 VERSION BMBK01000010.1 DBLINK BioProject:PRJDB10066 BioSample:SAMD00233067 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Ursus thibetanus japonicus (Japanese black bear) ORGANISM Ursus thibetanus japonicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus. REFERENCE 1 (bases 1 to 5007) AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Endoh,D., Yamada,T. and Yamasaki,K. TITLE Draft genome sequence of Japanese black bear JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: U_thibetanus_scaffold_01 Genome Coverage :: 87X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5007 /cell_line="NIES_3610M" /collection_date="2015-08-28" /geo_loc_name="Japan:Tokushima" /db_xref="taxon:378754" /mol_type="genomic DNA" /organism="Ursus thibetanus japonicus" /sub_species="japonicus" /submitter_seqid="Urth_10" BASE COUNT 1295 a 945 c 1159 g 1608 t ORIGIN 1 tgtccctctg tctgttgtca ttccctttct ttgatggttt cagtaaatgt ttctcttcag 61 taaatttcat tgaatgtttc agctgagtct tgcctctgct gtgggaaggg tctactggga 121 atgcaggtgt agggggggga aacagtggcc tggtcaacat gcgaatatgt gtggggtaag 181 gtccatgaga gctttgcagt gtcttaattg caaaaggtgg tcaacatcta cggaagagtg 241 gcttatggac tttggcaaga gaatgaagct aagcagagcc agatggtgcc agtgaacagg 301 acgttggtgg gagtgttcag tggctgtctg gattctcagg gcacttaggg aacttacagg 361 aataagggag ggcaagggac agaaggcagt atccagaggc cccaggatcc ctcactgtct 421 tattggggct cagggcatcc agacctacag catcaaaatc aggccagcct gtgtaagtgt 481 gtatatgagt aagtatgtga aagtatgtat gagtttgtga atgtgtgctt atatgtgtgt 541 cagtaaatgt gtgtgaatat gtgattgagt atgtaagact gtgttagtga atgtatgtaa 601 atgtgtgtgt tgagtgtagg catttgtatg tgttactttg tatgtgcatg agtgtgtgag 661 tatgtaggta ggtggatgta tgtttatatg tgttagtgta ttcagtgaaa atatgtgtca 721 gtgtgtgagt gtctatgtat gaacatgaga atgaaatgag cagatgtcag tgaatgcatg 781 tgtgtgtaaa tgtgtacatg ggttaatgtg tcttgtgggt gactgtgagt acgtatgagt 841 ttgtgagcat ttacaagttt gtgtgtacat aattgtgtgt gaatgagtgt gactatgtgg 901 gtgtcccagt gtatatttat gagtgttcat atgtataagt ggatttgtgt cagtgaatgt 961 atgtgagtgt gtgtgaaagt gttgatgagt gaaaatgtct ggtgtatgag tgagtatgta 1021 cgaatttgtg tggttagtgt gtgtatgagt gaatatgtgc taatgggtga gtgtacatgt 1081 gtcagagtat gagtgaatga atgaaaggat gtgtgagttt ctgtgtgagt gcacgagtta 1141 gacggtggtt ttttatttct ttgaggaacc aaacaagaga gttggaagaa ggcagagcaa 1201 gaacatgtca ctacttcgtg aaacaggagc aagacttctg ttggcgccaa gccgatgagc 1261 cctacagctg cacctactat gcaatcatcc attcacaacc cctgcatgtc actgttatca 1321 aggtttctac acttgtgtgt gttgctaata ttgttgtgtg attaaagcct atgtgaacat 1381 ctgtttgtga gtctttttgt ggacttttcc tttctcttgg atatagcatt ggaatggctg 1441 ggccacagaa tagggttacg tttaactttg taagaaattc aaagctgtta tgacaatttg 1501 tactcccatc agtagtgcct gtttcttggg gttctcagaa attttgtgtt gtcagctttg 1561 aacttttagc cattctgtca gtgactcatt gtggtatttc atcgtggtat tggtttgcat 1621 ttttgtgacg attaatgata tggaacactt ttttgtgtga ttattagcta tccttcttaa 1681 tgaactgagt attcaagtct cttgcccagt tttcaagtgg ggtctttgac tttgtttcat 1741 tattgacttg tgcaaattgt caaaatactc tggatacaag ccttttataa gatatatgtg 1801 ttgggactat tttctccctg ttgtatctta tctatgcaca ttcttagtgg tctctgttca 1861 taagaagatg gatttaactg tgatgaggtc cactgcatca tttcttttct tctatagtga 1921 ctactttctg agtcctgcgt gagagatctt tccttgactc acatttgcaa aggtattgcc 1981 tagttttcct ctagaagccc tgtagtttta gcttttcatt taggtcttag gatgtaccta 2041 aattaatttt tgtatttggg cgaaggtgtg gggtcaggat ccatttgaaa aattttcatt 2101 ttgacactga ttttatttag agtgttggtc aaaaattagt tgtgcacctg tggttctatc 2161 atggtgttcc atattccctc ttctgtattt ttcagctcca gactttccat ttggttcttc 2221 attatagata tccttttcct attgagactt ttcctcattg cttccttcat tattttcatg 2281 tttccctttc aattttggaa catatttatt tccaatagct gtctttaaat ccctgtgtgt 2341 taaccccatc atccttgcca tttatggacc tactcgcaca tttccccctt ggttaggggt 2401 catgtttcct tccttcacat atctaaaagt tttgcataga ggccagacaa tttggttatt 2461 atgttgttag gtgtctaagt tttgtttatc ttatttctgt gttcagtttt gttccagtat 2521 gcagtttatt tacttacaaa ccacaatgag cctttccagg tttgttgtta agctttgtta 2581 atgtaggtct tatagagcta cctgagccgt tctcctaatg tacgacctta ctgggttctg 2641 tcatgaacat ctaggaactt caatatgatc tctccactct ggctggtggg aacactgtgt 2701 aagctctggt agctccccat cttacagctc ctggtgaatg ttctgtgccc aaacttgtgt 2761 tgtctcagtc tgagcatgca gagttagtat gcaatcataa actcagtgag aactttgtgc 2821 aatactctgg actctttcta tgcccaggtc ccttctctct agaatattgc ttgcaaaatg 2881 gagtaatatc caaatccaca acttagcaag actgccacat gcttcttgga ttccctctcc 2941 ctctgccata gactgtaaag tacctccatg ccaatagctg tgctgatctt tggccccacc 3001 ttgattgttt gccttctctc aggtctcaca atcctggcaa gctccccaca gccaaagtac 3061 tcatcctgta ggggatggag ttaaatggtc agaaaatatt tggtgcctgg aaaaaattag 3121 tatagatggg gcccagggtg atggatagac aagcaaggaa agggagcata tccacaggga 3181 agttgtatgg agctatgaag ttcctatggt gaccatgcta agttcggact tctgctgcag 3241 atatgcagca ggccatggga ctctccaggg aagtatcact gccccagcag tttgtaaagg 3301 agaggaatga cctgctcatg tctgtgaact agagaagtca gtgagaaagc agtacttgtg 3361 atggactaga gggagcactt gtgtcatatc agaagtggct acagagatcc tggtgaaaag 3421 tgaacccaga ggctactgag tgttttgtgc tgaggttaga ggaacaccaa agctgggagt 3481 caaacagatt cctgttggac aggatctctt tgcagacctg agctaaactt ctccattgga 3541 aaatggcttt ttgcctagcc atctcccact ccctagaggc agctgtccgt gtcagctagt 3601 acctgcttct ctctaaacca aaactacagg gggcattcaa tgtcccaaga gggagggcct 3661 aggttctgtc tagaggccat gtgctactag atgcattctt gtgtgagttg atcctgaaag 3721 ggctcagttc tgccagggag tatgtgagga ctacaaagtc aggcagaatc ggtttggcct 3781 gacttcgccc cagtatgcca tcccaatcaa ggccagacaa cttgcttaca gttatctgtc 3841 actgctagtg acaagtgctt actggattac tcacaacctc tttgcctaaa gggaacactt 3901 ctgtggcatt cccttcaggg atcctgatca ctgcccccct cacacactcg tgatttggag 3961 aaatcataag ctggtttgtc tgcggttgac tagagatttg gggaaaccat ctcctacaga 4021 gccaccaaga aggacacaga agaggggcct aacttcaaaa gcccaacctg gaggcaggcg 4081 acagagcagc acaccacagg aaatacacat ggccagctcc agcaaaaccc tggagtttcc 4141 tcggcaaaca tgtctcaacc ttcccacaat atgtgggcaa gcactacaaa ggcttcagag 4201 ctagtgccaa aaaagaaacc caagtagttc ctttggaaag gatatgaatt ctagaggaat 4261 aaacatttcc caggtgtatt aacctccttt ggctgcagta aaagttacca tcaactgagt 4321 ggcaattcct caaaaaagaa aaatttattg tctcacagtt ccccctccct ctgctgctgc 4381 ccctgcttgt gctctctctc tctctctctc tcgctttctc tctctcaaat aaataaataa 4441 aatctttaaa aaaaattctt ccaactgcat attaacacaa ttacttactt tggaaaaaaa 4501 atggtcagac tgtgctgaca gaagttaagg ccgatgtgcc tcattggcgt gacaatgatg 4561 aaggctttct ccagtaaagt tccacgacac gtatttccca tacattgaat gagctagatc 4621 tgcaacttta aagttttagc aacaatatgt ggaaaacatg catacggtaa gagcattttt 4681 atcaagaact aattattgcc aaaaccatat ttaaattaat tctcagtgtg cccagacttt 4741 tccaagcaaa tcagatgaaa caaagtagtt caaagtgaaa gaataagaga cagaatttat 4801 agccatgtct ttgcaaaagt cttttggttt atttctcaga aattgtgaaa tgaaggaatc 4861 gaatgagtgg aggacccatt cttttcaggc caggtggttt ccaaaaggac ttaatcgagt 4921 tgtcagctga ttgataggtc cttaaaaaca atttttttaa tgatttttta ttatattatg 4981 ttagtcacca tacagtacat ccccggt //