LOCUS BMBC01000001 5000 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_1. ACCESSION BMBC01000001 BMBC01000000 VERSION BMBC01000001.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_1" BASE COUNT 1539 a 1009 c 894 g 1558 t ORIGIN 1 cccaggacag cctccagcag agtagacaga gacaaagaag gcattcagta attctgcctt 61 ctttgtacct tctgtcacca gggcacccac cccgttcatc aatgggccta cattgcctct 121 gttattagtt ttatctgcta tgtatttgaa aaagttcttt tcactgtcct tgacccctct 181 cacagctgta attctaagga ggccttggct atcctagctg cctttctaca tcctctaaca 241 gctgcctaat agtcctccca cgtggccagc cccggcttcc atgacctgta aactctcctc 301 ttctgcttga gcatacccaa cagatcccta ttcaaccacg caggcctcct ggctcccttc 361 ctttaaattt agatggtctt tacagagaga gtgagacatc agctctccag acggtgattc 421 attctgtctc tgatgggatg gtatgaatca gccactgggt ttagtgttct ctctgctgaa 481 tacagagagg gcctagatga ttatttcata cttaaccctc ttttcatcac aggtaaaatt 541 acatgtagtg aatcctaccc attctgtgtt ccagatacta tgcagtttat aaattttttt 601 ttcgtaatgg aataataatc catatatttg ttatctgcct actcctgtac agaacctctt 661 tgggacaatg aatgtacaac ttatgccata aataaataat taaatacatt tattaacaga 721 tgaaactata aaaaataggt aagtgaagat tgtctctgct aatctactat tctgcaaagg 781 ttattctgac tcacagaagt taagatatac aaagtcttcc aaggcatcat gatgactttg 841 tctcagctgg taccagtagt taaaacttct ggcctgggat cactgactgc tgaagtacat 901 catgtcaata gcgtttcatc gccaatgtga atctgggagt cgtgtaaagc tattcattag 961 tagccctggt tgctgtagga cacttagtct ttctagagtc tgtctccctt ttctgcctct 1021 tccaaattaa gatctcgact aggaatttaa tagcagcatt tcctgtagaa agctggccta 1081 cccaaatcta gcaagtcacc tgtattgctc actgcaatta gaaggaaaag tgtgactttg 1141 agaaaagcaa acccaccttt tttttaccta ggcagcaacc actggaaaat gcttttccag 1201 attttgccaa gtttcttctt ccctgagaca actgttccta tttcaatatt ttccatattt 1261 tttcagtcag gtgttgtttt gttcagattg atggcaggta aacttcttta ttgagcaaaa 1321 aatgattctt ttctcatggt ttaaagcatt gctgactttt atcatatgct ccatataaaa 1381 gaatcatctt ccaattgtga acatattcaa gtactagctt ctagttgttt ccatttttct 1441 cttgtagttt aggatgcagc tcctcaaaat gatgacattt attgtctctt cttcccttct 1501 aatttatttt ttcactttag ctgcacctgc tgcaatggaa atttgaaaca gcacagcaag 1561 aaaatcaagc acaatatctt aagtttccct gctacctcac cttatgcgtc cctctctaat 1621 ttatgtataa aaggtaggtc ttctgctcca ttactattat ataggggttt gtacaaaata 1681 tattcgtcat ctctgaaact tgtcccacaa acaaagtatt tttagaaagt ctgtgcatgt 1741 attctctgtc atcctggctt gtagtttaca gaagaagagg gaaaagggca tgtaaaggag 1801 catggaattc aggattcagc ctcctggaat ttgcccatgg atttttattg cttttcaaag 1861 tgtgaaaagg cagtaagttg aaaagtgaaa tcttgattct tttgaaaact ttctccaatt 1921 aaaatatgtg tgtgggtgta tgtttgttgt acaaacttgg gatgcattct gtgatacagt 1981 tttcgcctgg aagcaatttt cactttctgg acacctcaaa tatttgaagg agaaagcaaa 2041 tttaatactc tcctccttat tagccaacaa aagcttctac ctgccttcgt ccataacttt 2101 ttcaatcaga tgctttcagt ggaatgggga gaagttcacc ctggtgtaat gccattacca 2161 ccttggagct cctatatatt gaatttggct cctaggtatt cattatttgg gcctgctaag 2221 caatgccatt atgctgttct tcagtgcatg tagtttagcc agtagtacct tggggataag 2281 cacaagtcct ggaatgctgt ttgaatagat tgctgcaatt tatgaatgac gctattaatg 2341 cggtctagtg agtatgatct atatagtttt ctaggctatc tcccattaag cccaaaataa 2401 tcgaaaacta gatgagtccc tacaagcagt gagtatttac agtacaagaa atgacataag 2461 gttatattat tcacgatatt caacctaaac tgtgcattta cacctgagaa tagactgtgt 2521 agttacttca gagacaaagc aatgttaatg agattgatag tttcagaata gttgctcaat 2581 tctgtactaa cccacgagga cataaaaaag cattcctttt tttcttactg tctctgacta 2641 caccccagca tcctcaccct tagctttcac gtttgcttct tcactctggg cagttttttg 2701 caaaactgga agctgtggca ggctgacctt agagtttatt cagttctgct gctgccattg 2761 ctcctcaaac aggtcggaat ctatctggaa tcttctagtt cacttgaggg aaattaaatg 2821 aatttttgat tggatagttt ccagtgaatc ataaactgca ctaattttct attttgaagt 2881 atctctattt ttttttcact tgagtgagag gtggaggagt ttctccttca attgtaaata 2941 acttaaaatt ttaatttagt tctggcaaga aatattttgg tagagttttt ctagtcgtga 3001 tattcataca tactctgggc atttttcttg tacagctgca acacagaaag gataaatttc 3061 atacaagaaa agttctgccc cccccgccca atcccccccc cttttctaaa acaatttcta 3121 taaactggat agcatccact gcaaaaaata tatatctctc aaagagagaa aattgaaaac 3181 agaatctgta tactgtagtc tctcattatt ttctgggaag taattacgct cagatagcta 3241 gacactgtca cctttctctc ttagtatttc ctgccaaaac cagtatgcca ctatacatta 3301 taagtattta ttgcactggt gaaatattgg ttcatatttt tttattttgc ttccacacta 3361 atactactag taaagtcaca aagaccttat aaaaatctca aaggccttca gtatcagaac 3421 agcccaaatt tgtgcttcaa gaaaatgttt tcatcatgca gctttaagct atctctaatc 3481 caataaatct acacagccca aagtggtgtt gccttatcat cccattaacc aaaaggatgt 3541 gttgccttcc gaatcaatga caaatcatta catgtcaact tacccaactt cccgtatgca 3601 gtctaggaaa cctcccgaac agctacacct cccaaggctc cagctcctct ttcagacact 3661 gcttcaggtg ccaaacctgg gaatcacaga atggtttggg ttggaaggga ctggagagtt 3721 tagttggcag atgcaatact ttttgtccta cagtaggagt ttgtatttcc catactgtcc 3781 ttataattca gtgctagatt taagaaaaaa aaaaaaaaag tgtatatata tatcccaaaa 3841 cattaaaaaa cctatcaaaa cccaacctcc caggaaactg attgtctctg ctcttttgct 3901 ggaagaggca tcattcttgg aatgttgatt catttgagtg aatagggcat tttagtgaat 3961 aaagaggctg tagcctcttt tattctgtgt atataagttt gaaagctcct cagatataag 4021 gaggtgattc ttcagttcct gtctttctgc ctgagggccc ctccgtcacc gcttctgagc 4081 tgctgcatta cacctcccac cctaacggtg gcagaaaaac cctgcacttc actgcagtga 4141 ctgcacttaa aaccaactac atgaggggga aagtgacagg gcacatcctg ccttagcgtt 4201 taaaaaaaaa ccaaaacagt cagaaaaaca tcgacaaaat gagagatgct ccatagatca 4261 ttgtaaggga aaagacagca actgtttaat ttagagaact cagaagttac ataaaagact 4321 gagctaaatc tataactggt aaaatcagga gtcctcattg ctcgtatccc ccaaacttga 4381 agaaatgcca taaaattttc taggcaaaat gttttacata aatagaaaga ggtctgtctt 4441 ttgtttattt taaacacaat tctttcttaa cttttgaaat tcattgtcaa aagacttggc 4501 gtttttagca agatctaaca agaaaacaaa gttgacatct ttgtggatgc ctcctgaata 4561 attatagtag atggggaatg aaatgaatgt gttcacttaa ctgacttaga aacaaaagac 4621 cgactatgta aatagaggtg tttgctgaag atctgagtaa aaatttgggc aatatttttg 4681 aaaattcact ttcttctagg aataagttat aaaatctcct tggcatggtc agcttctgag 4741 tcagccagaa ctagtcatgc atctcctaca ctcagcccat ggttacatta tgcaatctga 4801 caagtaaaac taaactagaa tcaaatcagt cacttgatcc taacatagaa tattggtgaa 4861 aagaaaaaag aagaaaaaga aaaagaaaaa gaaaaagaaa aagaaaaaga aaaagaaaaa 4921 gaaaaagaga agaaaggaaa gaaaaaggaa aggaaaggaa aggaaaggaa aggaaaggaa 4981 aggaaaggaa aggaaaggaa // LOCUS BMBC01000002 5000 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_2. ACCESSION BMBC01000002 BMBC01000000 VERSION BMBC01000002.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_2" BASE COUNT 1329 a 1326 c 1299 g 1046 t ORIGIN 1 gttggggccg tgacacctcc ctggggagcc tgttcagtgt ccagcacctc tgggtgaaga 61 acccagcatc ccctccctcc gcctgctgcc cacgctgctg ctgatgcagc ccaggagaca 121 cttggctttc ttgccagctc acgtcccatt tgtcacccac ccgactcccc aggctcttct 181 ttgccgggcc aaaagccttc cttcctttcc agagaaggcg aatctagtgc atgagtctca 241 agtgaagcca aacccaatac tgtgtgaagg aagaaacact tgtgcacttc tccaaccgtg 301 catcagaagc attgtctggt acccccatcg tgggcactca gcatcactct cgcgtgcagt 361 ggtcacctgt gagccgatac cactgcagcg ggaagaaggt tgtgttaccc cagcctcacc 421 ctgtggactg cttgtgcagg gcagcagata tggagccatg gtggaagatg aaaggagagg 481 agatgatgga caaggaacag gaaaagaaga tactcagaaa gaagttatgg agagactgac 541 accatgatga aactcccaat gagtgatccc acagggactt tcatggccac cagcatggtg 601 tgagctcccc gttagagagt cactgcttac agagagccaa gcccatgggc cagagcagct 661 ctcaaagcct ctgcagggct ggtaccacca gcccagcccc agccagcaca gccctacctc 721 caggagatgg cactggagac atcctgaaga tacagttgtt tgctttgcag ctattctaag 781 cgagcagcag ctctgtattt atggcagggc ctcagactca gctcatctta tgattctgct 841 ggcaaagctc aaacaccccc agcagcctca agcccagcag gcagctcagg aggcgccagc 901 ccaaagcaag gtcaaaacag ctcccgagta tcagtatggc ttgaaatcag gcaaagacat 961 gatgtgccac ccacgcaact ctccttctgc cttttcaaaa ttgttttcct aaaatccagt 1021 caattctctt tcagctgaaa gccatcaatg tacgttgatc tgcagccaaa tatagcctgg 1081 gtgttaaatt atgctccttt ctgctcatca gtacaccaca ccatatctct tttacttaat 1141 aagttattta acttagtgtt tattttgtca gattgtgatt tcaggttccc acgggcatcc 1201 cacatgtcta cagaatgcat ttgatttttg agggaatagg gagcttcatg caaaatgggc 1261 tctggaaaaa ataatttaaa tggttttcag tcattaaatt taaatataaa actaacggaa 1321 tattcagagt aaataaaaag catatcaaaa cgtaccttgc atctgaaaat tcattaaaca 1381 gaaaatatta actaaaggta ggaaatgggg ttgttttacc tcaggccaga aagtcttcac 1441 tccccaaatg tggggaaggc agccccattt gctgaaccac caggatggat ttccaaacag 1501 cctctagaga tctgggtacc cacaggggct ctgaaaccct cccaaagcac acactgaaca 1561 tggaccttgg ccttccatgt ttttagtgaa gagaaggaca cttccaaagc gctcacctcc 1621 ctcctgcgcc caccggggtt aggcgggagc agagccccct cctgagtccc caccgacgcc 1681 cttgtttcag tgtttgaact agtcccagca aggtgaatat ttccaccaca gtggcttgat 1741 aaaccaagcc aaaagcaagc agagcaaaag ctcttcggaa taacaaggac tgaaagtact 1801 gacgtttgga agaacgtaaa tagctgcttt tgctctgctg tgagctcaaa aattcaaact 1861 tatagaaaca tggaaaacac tgttgagatg tctgggaacc tggatcacta gcaatgtttc 1921 tgggctgggg atgcccttgg gagctgcgac cccaaagccc ctgtatcttg ctgctgtcgc 1981 cgagctgccc gaggcagtgt gcttcactca cgctgccgct gtgaaaccag gacacagtgc 2041 ttttcacgta atgaatttag aacatgaaaa cagctcttcc tcagtgcaga agcagctcag 2101 gagccaagct gcccctggga ccagtttgct ggaggctggt ggagttcggg acagccatgg 2161 ggggccgcac tcgtgctccc actctgggct gccctgggac cggccctgcc ccatgcggct 2221 cacgccagcc tccctgcgct gctggcgccc agagcccaat ccgttggccc gggataagac 2281 aaagctgctc ctgggaaagc tccaggcctg atgaggctct tctggctgga gatggcaact 2341 gcaaagccag aataagaatc cataatctta atgctcagtt agtcctaatt tacaataggt 2401 taacccaggg ctggggagga gcatccactc ctcgttcctc cttttactca ctgatttgct 2461 cacaataaag tccatacaaa ccctcattgc agaaatacct acccaaggac cgtgcttcaa 2521 gcacaaggca tatccaaatc agctctccaa ctgatttgct ctccagttca actcccccag 2581 gcaaatgcag gaagggaggt gggagcaggg ccgggctctg ggggagcaca gacacactga 2641 ccaagctgga gcagtgtgag ggctgtgggg gcagcaagac gtgctgtcct gaggactgaa 2701 gagcccaagg aagatgtggt cccacggttc aatggggcaa gagctcgggt gaccagggac 2761 acagcaaagg ctaaagtttc cctttcttct tttgccttgg tgatcactgg taaggtccgt 2821 ccttggcctc tcggtgccct ctgagcatga gtggcatgaa acaccactca tggagacaga 2881 tgtagacttt gggtgtgatt cagtcaactg gaaatattca ggtccatgga accaggcggg 2941 atgcatctga gcatgcttca cacatagatg aggtttttag ggacatggtt tagtgccatc 3001 ttctgaaagg atgatctggg gaatccctca tgttcccctc agtcactggg gaaggcattg 3061 agtaaatcct cccaagacaa gaaggtaact ggaaacagcc aacatggatt tactgagaga 3121 aaattgtgct gtgccatcct gatggccttg tccgatgaga tgagtagctc tgcagacaaa 3181 aggagagcag ggaatagcac acccggattt taaggccttt gacacagact cccattgtac 3241 atttatagcc tttttgatgg gacacagctt ggataaggct gatggaaaat tgtctggact 3301 gccaggttgt gatcagcagt acaaagacca accagtggcc atttcctgat ggtaacccct 3361 ctgtgagcaa tggtgggtct gaaaacacca ttaaacacct tcaacagtaa cctggactgg 3421 agtgtccttt cagcaggttt gcagaagaca ccagactagg gagagtgatg gaagacagga 3481 ctgggcctca gagggacctc agtgctttgg agaagggggc tggcagaaac ccatgaagct 3541 caaaggcaaa tgcaacatcc tgcgatggag tcaggatgca tactgcagga caggctgggg 3601 ccagctggcc agaaagcacc tagagctccc caagtcctca aggacaccag gctggccagg 3661 gctcagcagt gaaggtagaa ctcgccatgg gctgggtgag caggacgaca gccagcaggg 3721 ggaggacagg gattcttcag ttccacctag accacaacta cagttctgtg ttctgcttag 3781 aactacccag tgggagcgat gccagctgag gccaccaaag tggtctgggc tggggcacag 3841 gacaagtaag gacaggctca gaggaacagg gtttggtcag ctgaaggtga caaagctcag 3901 ggggaactta ttgctgtcta caatgaccca gtggaagaat ggagagaagc tggagccata 3961 ctcttcttgg aggtgcacgg gcataggaca agagacaacg gaccaagctg aggcacatgg 4021 aattcaagtt aaatattaag ggagaaaaaa tcatcataaa ggtggtcaaa cactggatca 4081 ggactcatgg actgatgcct acggcacctc catccttcta gacacgaaga acgcagctgg 4141 acaaggccat gagcaaccca atgtggctgg cactgctctg tggcagggct gggacctccc 4201 gaggtctctt cccaccagca tgctgtgaac ccacaataag gaacaaacct gggtgccaga 4261 tttctagttg ggctattgct tgtccctgga tgaccaagag tccaaggggg acacccatgt 4321 gactaacaag gccaatgcca gctgcaatag ctccgtggaa acacagtgtc cctgctgagg 4381 ctctgtccca tggcaccaaa aataccaaat cacaccagcc gtgcactggg aaccagggca 4441 aaaccaatgc aggcaacggc cagggatgct gtcacactag ttggtgtgtt ccagccagaa 4501 agctgcgtta ccgccaactc acccctcact gttccctggg tgacagctcc aacaatcaca 4561 tcagtaccgc tcacccacca ggcacacaca gtccgacagt gctgtcacct cctcttaccc 4621 gccacgcgcg gtgacaagca aagccagcaa cgcagctctg ggacaatgct ctgtgcccag 4681 ctcaccgccc accctgcaca catgagtgtg tgagctgggc acatacagct gagcacacat 4741 ggctgagcac acacagaatc ccagaatgtc aggggttgga agggacctgg aaagctcatc 4801 cagtgcaatc cccccatgga gcaggaacac ccagatgagg ttacactgct ggggatacac 4861 tgttggggac acactgctgg ggacacactg ctggggacac actgctgggg acacactgct 4921 ggggacacac tgctggggac acacggctgg gcacacactg ctggggacac actgctgggg 4981 acacacggct ggggacacac // LOCUS BMBC01000003 5004 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_3. ACCESSION BMBC01000003 BMBC01000000 VERSION BMBC01000003.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5004) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5004 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_3" BASE COUNT 1309 a 983 c 1083 g 1629 t ORIGIN 1 acctcattaa tgtttacaga tacataaagg gtgagtgtca ggaggatgga gccaggctct 61 tctcggtgac aaccaatgac aggacaaggg gtaatgggtt caaactggaa cacaaaaggt 121 tccacttaaa tttgagaaga aacttcttct cagtgagggt gtcagagcct ggcccaggct 181 gcccaggggg gttgtggagt ctccttctct gcagacattc caacccgcct ggacaccttc 241 ctgtgtaacc tcatctgggt gttcctgctc cggcagcgga ttgcgctggg tgatcttttg 301 aggtcccttc caatccctga cattctggga ttctgtgagt gtggctttgt tttgggagca 361 gcaagagatg ttccagctgc agtgttttca gtgtttgctg ccccagttga gtccctctca 421 acttaaaatc aggcagaata tttttagtgc tctgtgcgcc gtctccgtat ttcaagcggt 481 ggactagact gaaatagcaa cctgcatgtt ttcactcctc tacacagaca cgggacgttc 541 cgttggtgtc tccgtacccc gagcagttta cacacgggtg tgcgctgcac accgcactgc 601 acactgtact cccagctgga gctgggggag atctccacaa tttctgtagg tagaagaaaa 661 gttccaaatc gggcagctct ggctgagtca gagacagaac tggaggctct tggtaccttc 721 cctgcccgag gtggcaacac acttggaaca agcatggaag atggagacag ccatgccctt 781 tcggcatctt ttaatgattc tgctttaata ctagaagcga taaccagcac aacataaaac 841 ttctgtcagt ttgatttcct tcttaaactg catgctcact ttattttctc cagttatttt 901 acaacaattt gcatgaatcc gtggggtaaa cggggcaatt gtagggatgc atcatcgttt 961 ctgcaatatg ggaagtgggg atgcagtcac ctattctctg tcagcgttac ctttgggata 1021 tcgattggtg taacaagagg tttttctggg atttcataat tggctgtaaa accgtgatta 1081 gaaacctgtc cataagaagc tgagtacaga aaaagagaaa ttgctcaaat cttcggagga 1141 tcttgtttgt cattgtaatc ctgttcatcc atttggtaaa tgctgtattt taggctgtcc 1201 ttctcccagc aatgctgcag agaaacccga ttcacatgtg gcagcgaggg ggaaggggcg 1261 cgtgttatcg aggtctttct cttgcagatg gtgtgtgttc tgtttcccac aagcatcgct 1321 taattcttac ccaactggca ttactataga aagaacttgc ctcgctaacc actgtaaaac 1381 agcatttggt aaagcagctc tgaagcggcg ttttgaggtg ttattacctg gaaccaactc 1441 tcagctttta catttaatta tgttttttga aggtgtgggc aaggagtgac caggattaac 1501 aagttataaa attaggtact ttcttctcta atactccttt ccaaactgtc ttgggcatct 1561 tgtacgcatt aattagttag cattaattag ccgtgaatca tggagcccat tccccttttt 1621 ctgtcttctc ggtgctttgt gttctcctgc gtatctgctc ctgcaggccc tgaggaattg 1681 ctgctcccga gaccacaaca aggatcttct ccaaagactc tcattatatt taccaaatct 1741 atgtagtagc aaaaagtgac agcatcctga aataagacat tctaagggca gatttgttaa 1801 ggtttgtttt atagagatca ttgttttcct aatctaaaat aatacttagt gcttgttact 1861 ttttttaact tcattttttt ccttttggct ttcagctcag atcgactgat agaagaaaca 1921 ataaggtagg aatgaactta ataattttca ttatcttctg tacaatcaga gtttatattt 1981 aattgtgtct aaagatatca gtcattttgt ttatccaata actgtattgt ttacgactca 2041 ccatattaca aggaagtggt ggtgtggttt gttttttttt tctattcagt gttaatgtaa 2101 tggtgtgact taaatatttg attcatgtgc atttctgttc aagggtgaat agcccctaca 2161 aaaacaaagg gagtgatgga gcagagtgaa tctcaggttg agctgttaag ggcttttcca 2221 gtagtcaagc tgtttcttct cacagtgacg ctcttctaca acacaatttt ctgtaatcct 2281 tcgtgtattt ggcaccctag tgtgcagctg acataggtga gggctttaac cacaagagct 2341 tcagaggtta ttgctgttgt atagttattt atgtgtgttg tggctttttt ttttaacgtg 2401 gtttgaatac ttgaatgtta ccttctctaa ctgatctaga aactttagaa ctgtagcatc 2461 atgaattact tttatcatct gtgcctgtcc cgcttttcta ttgaactctg ggattttgca 2521 aaccaataat tcagagtgcc caatttaatg gttttaaatt ttagattatt gctttagaat 2581 aaaaaggaag aaagctatgc tttcagataa tgcatgtact ggcataaggc atcaagaaca 2641 gtagttagag gtgctctgtg tccattaagg gctggctagc ttaaggacac agtgggctca 2701 gtataattaa cacggtggaa aaatgtgtta aaccacatta atgtgcagtg atgaaccaga 2761 agtgcttggt ccaataatgt ctgaaaatgt cgacataatc tcactgcagc ctcatgaaga 2821 tgtttgccaa acttggcaca gttactatga atatttgttt tactttgggt tctagtcctt 2881 tcctgataaa tactcctctc ctttattgct gtgtttccat gcttgtagcc ctactttttc 2941 atctcataaa aatgttcaat gtttgttgaa tctcttattt gctgctgctt cagtaactag 3001 agcgttaaac agcatatggt gatttattaa gcttaatatc ctgcaaaatg actcagattt 3061 tatgatttga gctcttcgcc tcacctcttg atgacttgtc atcagagaag ctggggttcg 3121 tgtgtgtgtg ataagtgaaa ccctgatgtc gattcacccg tgcgagggaa cgcagaacag 3181 ggcaggtaca caaatactca ccaggttgct ccatcagctc cgaacctgct caggggctcc 3241 gtggtgccat cagcgggtgt cctgatggat ttaaaactgc ttcgagtttc atttgcgtga 3301 cctgcagacc catggttgac tacaaatcga ctgtctccac agtggcagct tctcacgcaa 3361 tgatccccga cacgcagttt gggccagagc tcctcggcgc tctctgctga aaaattcctt 3421 ctgataagaa acgtacttcg atttttttag aaggctggat ttcagcagtc cttgttgcac 3481 cgtattttat ctgtagtaaa tgaacttctt gttgtaaccc ttgccaaaaa tgttctgcgt 3541 ttctttttgt agaaaaagag cttgtttagt aactacattg agcaggaaat gtaagtccat 3601 ttgtatcatc taaattcaat tttggctctg tcaaaaccaa ggtgaatttt ttgttttact 3661 ctttttcttg tcatccccag taattgcaaa tattcaggta tggtattaat tggtaataaa 3721 tgctactgca tttcaagtga atttaccaga cagaaatttc cccagcttct gataatcaat 3781 tgctttatgt attgtaaagc aagtgaaaga gggaattgtg caggggaagc tgtttgaatg 3841 cagattcatt gggtgaagtg agatgtaatt accttattct ggctaccaat actgctctgt 3901 ctttagggtt cacatctact gtagttcatt actcattatt tgggtgtaat tcaggaagtt 3961 aaatcacttt attttttgaa tggtcgttat taagcagggg ttctaggcac tggaaagcat 4021 ttttctgtgt gtgcagaggc ttttgttgac aagctggaca ccggtgaccc cgtggcagcg 4081 ctgaccgtgg aagccttgat ccagcgtttt gtagagacaa gaaacaaaca cacgtgcaag 4141 agaactgatg agcagctaag ctgaaattat tcagtaacta aagccataag tagtgctgtc 4201 attccaggtg tttagttagt cctgaacttt taagcaatgt ttaaattaat gacgtgagat 4261 gggttcttac tgcagcatat ttctttccag aaatgagtgg gatgtgatac tttgtactgc 4321 agttctttgg gaacagtgct cgcttgtctt ggccatattt aaatccaagc atagattttg 4381 cttaatatgt ttggtgttct caggttttca ttttcaaaca ttaccacttc tccaaaatag 4441 caaatgattt atttcttgtt ttccaacaac ttatattttt agattggctc agcttgattt 4501 tttttccata gttttgcatt tacagcctga caagttctta gggttttatt gtaacactgt 4561 ttctgaggcc tgatccaggc tgattttttt tagtgcttga atattaacag attggactat 4621 tccacttcca tgctgaaggc agacttaaac aatagattta atttataaaa atatcacctt 4681 acatatttgg agtatttatt taggtaatga ttaggatgca ataaaagggg gagaaaatca 4741 tttgcattga attttgactt tacagaatgg aaaggcatga attagatttt gagacttagc 4801 tctttgcaga agatccttgc cagagtgcca aggcaaaatc acctgcgttt ctggggaaat 4861 gttcctttag ttttcatctt ggccttcatc aaaagacaca gaatcccaga atgtcagtgg 4921 ttggaaggga ccttgaaaga tcacccagtc caatcccccc gctggagcag gaacacccag 4981 atgaggttac acaggaaggt gtcc // LOCUS BMBC01000004 5006 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_4. ACCESSION BMBC01000004 BMBC01000000 VERSION BMBC01000004.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5006) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5006 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_4" BASE COUNT 1555 a 1053 c 946 g 1450 t ORIGIN 1 ggggattgca ctggatgagc tttccagggc ccttccaacc cctcacattc tgggattctg 61 taacaaatat ggagacagaa cccaaaattt cagctctaag ctcagtatat ttggctccat 121 gttccattgt aagacactga ggatagaaat ctgctttttt gttaaaatcc ttcattaaac 181 tgttctctaa atatcaagca aaaggaatgc acccaagcag actcctgtgt atttgatgaa 241 taatgttccc ttcctccttc tggtcatttt ctacaaaaac aattgactgt ggaacaaata 301 agttacatct ccaaggacta ataatcattt tgaccaaaaa aaaagaagaa ataaacccat 361 taaaaccaaa accaaacaaa ccaaaagcca caaatctcac caccaccagc cggactagaa 421 ctcgttacat acattacagg tacttgaatg gatatgacct tcaattaaat atgccaaaat 481 tcagtgaaaa gctcagtttg cttatgtggt ttagaaatta gaatttttta tagaggatct 541 gatatccaga tgtcagacac accagatttt ttaaactagt tctcctattt atttttaatc 601 gcaagtacca taaatgcagt ctaggaagga tggatgaaat gtccgtttgt cattctcaaa 661 ttgcaggatc tatgctgtga acactcacaa ataacagaaa atttcagctt tttgttgcct 721 acccacactg aactggattt tccagatttg agtttgtttt gagacttcag aaaattaata 781 agtaaaaggg atggggtttg gtgctgttag aaatacaatc acattttgag aaattaaacc 841 agggaaagca tcttttccat tgctcctcac gtttccagta aattgtctac taagaccatt 901 ttttatgaac cttttatgct gctttggtag cgttttctcc acttgatttc atcacatcct 961 ctcattttac tggatcaacc tccagatgta atgatcctgt tgccataaag cgaagtagca 1021 tcatgaaggc atcttttctc agtttaaaat aattatgtaa gtgttaatta atataaccag 1081 aaattatatt ttctatatga tttatatgac tttgatctag acaaaaaaaa tcccaaacaa 1141 aacaaacaca accaaccaac cagaatctac atttgacatt atttcaactt gtgcattaat 1201 atgtggtatt ttattcccag aaaaacttcc cagcagttcc catattaagg acgactttcc 1261 ctagagccgt tcatcagact cctccccgca cttttacaca atgattctca accaaattca 1321 atgtctatcc tgcatctgag catggtcaga agagctattc tggcttttct ttttcgtatt 1381 gcttggcttt gtacaattgt attatatata gactttccta actattttta tagagcatta 1441 aaggacaata aaatgcatca cacaagcgtg aggtgacagc agataacttg aaaatgcaaa 1501 aacgggattc cagtggaggc cccagaacga caaaacctca tcagagggca agaaatcggt 1561 catcaaagaa acacaaacgc aggtaaaacc agtaatgaac ttgtaggtct cttccaacca 1621 aaatgagtct atgaaaatga gaactctatg aaagagacca aagaacaagt ctccaaaatt 1681 tgaagattat gctatgtagt aaactcagac ataccatgga actgcaaacc aagagcaagt 1741 aaaaggtctg cagtagcaga tgaactgaac tgcgcccaac aaagcagagg aggaaacacc 1801 ctctgtcaag atgcaccaaa ggacactgga tgctgacaac tcgctacaat catccacctc 1861 aggagtcaaa gagtcactaa aacgaggaac aaaacatcag agagagggag aaatgcagca 1921 gctctaacca tcaataacgt aaacttcaag tgttagcttc atcgcaaaga ataattcttt 1981 gtttagactg ttaagacttt aattaagcta acagtaaatt tgtgactttg catagagggt 2041 ttattccttt gggccacata aagggtgctg gcagtaatgc agcaagctgg tggaggattt 2101 gagcaatgtc gcctgtgaat cgatgcacca aagcggtatc agatcggcag acaatgcgcc 2161 attagcgcag actgttcaag ctgaacacag caaattggtt gtggctgtaa catgcaaact 2221 tccaggaacc aaatcatggt ctccgcaggg gcaccgttga aggagttatg gctccttcag 2281 tactccagct gggaaagcaa ctccctatcg tctctctttc agaggcagat ttattgatac 2341 tgccctacgt gctgtgccat cactggaaag actccatcca gttctctccc agcagtacag 2401 aaagttcaga aagacaatta atttactgtc catccagaat gaaatcctga cgcaagctga 2461 cctctttggt gaatcagggt cacctttgcc ttcacacggt gcagcaatta gattatttga 2521 attctagtct aatattaagc ccaagccttc ctgagctgct atggagtgga cttggtgcaa 2581 gacggagtta aactgggatg tagtcttgac tcttccttta tgttttctct tgacatcgag 2641 ctccttctcc agctgcttta aacctacgtc cttgatattc taagagcagc gtatttcctt 2701 ctgttcatgc atcttttttc ttcgttatta cagaaaccaa aataaatcac gggcatgata 2761 tatgcctcat gttcttgttg ggttgtgttt tttttttgag ataagagtta caaacagaaa 2821 tgtataaagt tcttaaccaa aaaggacaaa cagtggtgga aaatcacttg ttgacgtgct 2881 gacctttact catcatgatc tgtcagactg aacaggactt tggatgcttt gtattctcct 2941 cattcattca gacaatacct tgtaccacaa attacaacac agctccttag gggtggggga 3001 gcttcttcct ttcacatagg aaactatatt ttgcttacat tctgaaagca aaggcactct 3061 tgttacaatg ctctgtaaaa tcattaatta gcttaatcaa atagcttctt attaacttaa 3121 tgaccaaagt tattcaggtt tttttttcta catataattc taatattttt ttctgaatct 3181 gagcccccaa aatgctgacg atcagtaagt tctgctccat gtttatgcca cgttctcctg 3241 tttgccgctc gtgccactcc ttactgagca atgggcctcg ctccgctccg tctggcttct 3301 catgggagtt ccattcgctc cccaccggtt tgacagatct gagtgacgag cagagaggcg 3361 atgggttggc caagctcatg gttcgctttc cgggttataa aacggctgat ccacgagcgc 3421 tgagacagac ggagatgatc cctttgcccg gcagccgaca ttatgccatc aagcagatgc 3481 ctgattcgta tctccaaacg tctacgacgt ctcttgtgta gttttgagat ggagaggcct 3541 gaactgaaca cggccatgct ttttataaca ttattacaat aacataatct atactatttt 3601 tcatcccatt tattaagaag ctcagcattg tatctgattt ttaatcacga tttttaatac 3661 cttcagagct atctcgacaa actactgtct tgattgcttc ctgaatatga tctctgaaca 3721 cacacttaac gtcctgagtt tcgtatccaa gatatttcat ctcagaaatt tggaatctgc 3781 aagttctatt ttctcctttg cgaacacacc aggcagcttt gggtgaagcc ttcagacact 3841 tgataacgat ctcaatggga aatacaaaca attccctatt gtctggggac aagttaactc 3901 accacaaagg agctgcacct cttttcaggc tgaagtgttg ctaattggtg cacttcagca 3961 aggccacagc aaatcctgaa gataattact gcacagtgat attatcttca gtaaaaacct 4021 ctggaaatcg taggttttta ccataagcgc taaagtgtgt ggtctgagta gacgcacaga 4081 acagctctat tctgagctgt aaaaatgagg gttttcttaa aaaatcactg aatcacagaa 4141 tcacagaatg ttagggatcg gaagggacct caaaagataa tctagcaggt tgttaatctc 4201 aggcaaagtc caattgtgtt catttccact actcagaaaa aaatatcaca ttaaaatgac 4261 tgaaatggtg tctacctact ttaaaatatc attaatagga atagcaataa taatatcttt 4321 taatgctgat agatatccaa gcggtttgct gcctcaatac ttgcttatgg aaagctttga 4381 aaataagggc tgatgtctag agagtggtga gtcatatgag aatattgaag ctgacagaaa 4441 caaaaggaat ccccccaaaa actaagttag aattcatttc agatgaaagc tgtatatctg 4501 aaagcattga aaggtggtgt gaaaatacac ccctttaggc agaacaaaca gatttttttt 4561 cttctttttc ccttccacta actacagagt gttataggat accggtcatt cactgggaaa 4621 ctatttattt aaaaataatt taaaagtgta tttggtgtgg gaaaggtgtt ttctgagggt 4681 tgactttttc atggaatgta tcaatattca gtcattagca gtgctaatat ggataaaagg 4741 agatcacaga atcccagaat gtgaggggtt ggaagggccc tggaaagctc atccagtgca 4801 atccccccat ggagcaggaa caccnntgtc caggcgggtt ggaatgtctg cacagaagga 4861 gactccacaa cctccctggg cagcctggat ctttaagtta cacagaatca cagaatcgac 4921 tgggatggaa aagacctcag agttcatcaa gtccaaccct tggtccaact ccagtccctt 4981 gactagatca tggcactaag tgccat // LOCUS BMBC01000005 5008 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_5. ACCESSION BMBC01000005 BMBC01000000 VERSION BMBC01000005.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5008) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5008 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_5" BASE COUNT 1530 a 887 c 1002 g 1589 t ORIGIN 1 ctcctgcccc tctactctgc cctggggaga ccacacctgg aatattgtgt ccagttctgg 61 gctgctcagt tccagaagga cagggaacgg ctggagagag tccagcacag ggcaacagag 121 atgctgaaca tctcccgtgt gaggaaaggc tgagggagct ggggctcttt agcttggaga 181 agaggaggct gaggggtgac ctcattaatg tgtacagata tataaagggt gagtgtcatg 241 aggatggagc caggctcttc tcggtgacaa ccaatgatag gacaaggggc aacgggctcg 301 aactggaaca caagaggttc cacttaaatt tgagaagaaa cttctcagtg aaggtaacag 361 acactggacc aggctgccca ggggggttgt ggagcctcct tctctgcaga cattccaacc 421 cgcctggaca ccttcctgtg taacctcatc tgggtgttcc tgctccatgg ggggattgca 481 ctgggtgagc ttttgaggtc ccttccaatc cctgacattc tgtgattctg tgtaatatca 541 ggtttgcttt gtcatacgct actcttatca ccagacattt aatgttcttg agccttgtgc 601 aactgtatcc tatggtgagc ttgggacagt gctgcacttg ttctgccatt agcttgagta 661 aatattaatt taaattttgg tgggggaagg gagtttttat aattgtttgc tcttgttacc 721 ttagaggtta gacactgcta tttatagtat cttttagatt tattatagac ctcaaatcag 781 catgtctcct gtagcagatg ttcagtacct ttatcaaggt aaattgtttt aaagcaagct 841 aaaaaataaa attggtgagc attgtttata gtttgccaat ctttcttatg cagtgctgaa 901 accttcatta aaatgttagg ctgcaattag aagctttagc ataagtctga ctatgtagaa 961 gagctaatta gatgtttagg tgatcattct tgcatttatc ttgtttgctg cagtgttgtg 1021 attacatagt aatttgcata ttttgctaag atactccgaa ttgttcattt caattgacat 1081 ggaaatgctg agttaaaaag aaattccagt gtcgtttgtg gcggagagat aatgggattt 1141 ggtttggtcc aaaacactcc gtatctttca gttgtagact attaacaaaa tacaccacta 1201 actgcaggtt acagaagttg ctgagctctg taggtagcat caaatgtcat cttaaagcct 1261 taaacttttc tgtcattccc cgccctatat atttcagtaa gaataaatac tgtggtatac 1321 aaactgatat ttgcatttaa cttattacta acccaggtgt atttcttcaa cgtctcagga 1381 aacaaaggat gttctttata gagaaggtta gactaaaaaa gcagaatatt cagactgaat 1441 actatgccga tgctaaatct tcacagtagt tctttttatt tatgaagtac ttttgatctg 1501 agtagagaca ttaggaaata ggctttttat gtagagtaga caatgatctt ctgaattgtt 1561 ttaaaccagt gtgattatct aacataaaaa gagtttactt gaaaacttgg gagtcttcat 1621 gtagacactg aaaaatagtc ttttctggaa caagtaggtg caaaccgtgg atgtaaaaga 1681 tgtgttaaat ccctggtttt cactggttcc taggacaaac tactgcttag gatgttaacg 1741 ggagctcggt agctttatta gcgctcttca gtaaatggga aaagtcacag caagccagtc 1801 agaagacaac tgtttctcct ggtgttctca ttcttccttc ttttgccttc atttatgatg 1861 gttcagattt cccccttctc cccaccccca aagctgctga gtctgcctga agtgataatt 1921 atctctaaca aaactaagaa gagtagaata ccacagtaaa tttactgtct acactgacag 1981 caagcgtttt attactgcag cgctacttta ttattacgtt tttagtattt tttattgagg 2041 cttttttaat acagttgaag gtaactttgt tttatggagc cagaaagttt cgagatctag 2101 tgaataatcc gcaccacact acctttaatg aagataaggg agtattgcat acttgagcaa 2161 ttctcctttt ctcagatgct atttgagatt ggttttaatc aatcaaattg acattttttt 2221 tctataccgt cattccaaac agtaaaatat aagttaacaa taagagtata aaaatggctt 2281 tttcacgttt atctggtgca ctcaatcttt aaatccattt ctgtagttta ttgtttgttt 2341 taaaattggc agattagcac tgcctgtatt cagggaaacc tggtgaaaca gagatcttca 2401 tacatttttc atgtcacact atttttcatc agagctgtag tttgaaattg agatttaaac 2461 cataagttct gggcataaaa gaaagtgaag aatttcagca ataaagaagc agtagattgt 2521 aatagtatga actttccgcc aactaagtgt gattattttt ttaaaatgtc agccacaaaa 2581 aatgcctata gaaaaagatc aatagccaga tttaataaat taatgttttc ctagaatgaa 2641 attcagttca acaatttcaa atcttaacag ctaaatagtt tcagatttac aaattgcggg 2701 tttgcatatc acatatcaca gcctgtggat tttttgagct gagatctggc aatgttttga 2761 ttaaccttgc ctcacttaga aaacagcctg gtcttttttg ttgcatcctc gtcactcttc 2821 caattgtata aatccaataa gcagaatgtc tctgtattaa gaaaacctta ttttactgta 2881 caacttctgg agaaaatgag tgatcaggtt aacatataat ttacatactt gccattaaaa 2941 taaatattgt acatttcaga tgagtgggtg tttccagaag gttttgcaga aggagttcag 3001 ttggacagga gtgagcagtt tgtagctact gatgattcag cctgctgtaa tttaacctca 3061 ccacagaacg cctctgaaca tcacggcaag gaaaacagtg atcaccaaac gaataggaaa 3121 gagattttca cgttttcatc aagccctcaa tcagctcctc atgggaagtc tccaaatgtc 3181 tcgccagaat cttgcatttt ccctttggat ttgaagcaag acagtaacgg agtacatggg 3241 caaacccaaa ttgaagataa ctttgaagga actgacagca gtgaagaggt aggccacttt 3301 gtacatgtaa ttcttgataa agtcaccttc gtcctgaaat ttctaggatg aaattctgtc 3361 ttcgagctac acaaagggga taaatcatct tttcccccta tacctacagg tagatttgtc 3421 tttgtcaggc tgtgttgtct gtctggagac aggagtgaaa atgcaggtgt accctctgta 3481 acaagtggat gaaagaaacc aaactctgtc cgcccctctg ctaacagaga ggtgtatggt 3541 tacaacaaaa aagcttttag gaaagcctgc atcatagatt tgagtgagat acaagccctt 3601 tacggttgag cgagagtgca gtaaataagg cttcattctg ccttttcaaa ctgtaggcag 3661 ggtctgtttt gctcaccaac atcatcgaaa gcaaattaag aaatttcagc tttttactgt 3721 tacttgctta gtatttctga tttgtatcat gtctgagctg tttcagcatc accagcttta 3781 actgttttgc actgtcgaaa tctttcagca ataaaataaa tgaaagaaaa taaatgtttt 3841 tttaacaaat gtatcagctg atactatata gaaattcacc aatttatcaa ttcactgaat 3901 agttgcatta tgttattaca gtaactccta cttatgtcat agtgctaatg tatttcattt 3961 ttaattacaa aaatctgttt cttagcattc taatctgtta ctcatagctg agaagttgaa 4021 aacaggttac ataatagtaa gatggactga acttaacaga aatactctat atcctgtatt 4081 tctgagaaac caaattgctg atggtaatta gaagaaatat attttttaaa atatatgtta 4141 atcttacatg ctgacagaag gtatattgtt ccaggttttc actctattat tgtcttcttg 4201 tcattgtatt acagctttct ttaaaattca aatgtacatg ctcttgacct gtatcaaata 4261 agatgggcat ctcaacctac aatttcaata gttgcatgtg agcataaatt ggctttctca 4321 cggaaaacat aaataaaact tcattttaat taaaaaaaag tgcatatctt tgtagtttaa 4381 atatctcaga ctactaaaaa gtccaaaaat tccaaaagtt ttctttgggt ttatgtcact 4441 gcatcatgaa ttaaaaaaaa attacagcta aaggggctaa atcacagttt cgtcctagtc 4501 tacatttgaa gttagtgcag ctgcaaagga gaattatgta cttttttatt aaatctatgg 4561 aaaaatcagt attagctaca aaaagctata agagacaggt tatgcatcag gataaatttc 4621 aaataagcaa acattgactg ttgcaggtac tgagatcggt aagacatgca caataataac 4681 tgtgctatta atagaattat acagtttatg tcacttttgg cttttgggga ggaaatgttt 4741 ctgcctgcaa attgaaaaca gcaagtgttt acaaattccc ttcagtggtt actaattagt 4801 caccaaaagg tcactctagg aagtcaagga agggagccag gagacctgcg tggttgaaca 4861 gggaactgct gggtatgctc aagtggaaga ggagagttta gagctcatgg aaggaggggc 4921 tggccacttg ggagaatgta aggccgttgt cagagggtgt agggaggcaa ccaggaaagc 4981 taagccctcc ctagaattaa acctggcg // LOCUS BMBC01000006 5008 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_6. ACCESSION BMBC01000006 BMBC01000000 VERSION BMBC01000006.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5008) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5008 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_6" assembly_gap 4824..4848 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1358 a 1050 c 1123 g 1452 t ORIGIN 1 cagttctaca ataacagggc ctcaacaaga tgtaaatcaa cagacctatt agcagtgaga 61 ctcaggcgca tggacagctt gtgaacttgg acaatatcca atcagctaat gcatgcttgg 121 agcgtggacg catgatcagg aaataactgt atatatatgg aggcttattt ctgtaataaa 181 tggcttcgct tgaattcata ttggattgtg tggagtccat gagttttcgc cctcgcatca 241 tgcctattgt gcaaggaaac ctgtgaagtt ggggtagtca cagcagatac cctccttctg 301 catcaggcag gaacatgttg ctgttgcctc atatcccttg agtcaccact ttctcccatg 361 cagagagaga atagggagtc ctctatatca ttcaccctgt ctacctgctg ggcctgcttt 421 agggaaggta gagtgcaact ccagtagtct tatctcccac tcgcattccc tgatactcct 481 caacctgctc acctcctccc agagttctgt cactaagtgg aggagttcct ctatctgggc 541 acaccttcta gaggggtgct tactgctgcc atctggtact agtgtaagag caaggcacat 601 cctgcagcct gacacccagg tggcagcatg ttcccaccag accttggtct gggctgccgc 661 atcacttgtg gtgggttccg accttacaga gtccatggtt tctgctggtt ggataccatt 721 gctccctggt caagctggca gagcttctcc attttccctg ctcacccttc cgtgccaact 781 gttgcgcaaa ctgccacacc acgccatgct ctgtttgcat gccatgccac gctctggttg 841 ctagcactct ctaggctgtt ttttataggc atcgggtgtg gtcactgctg ccctgacaac 901 gcctaggttt cgtcagcgtc tcctgtgaga gagctgccag ctcctggcag atctctgtgc 961 tgccctggca tttcccggcc ttgggaaaac ccatctgctg ctccgccaca aaccagattg 1021 gcttcagagc agctcccctt ggggactgtc gagtttttca atattttcat gttaaaacgg 1081 cagaaagaca accttttttt gtggctactg ctagcagaag ctctgaagag agggagtttc 1141 tgcttcctat tctgcccttc aatatgctct ttccagcaaa acgcccccag taacctcctc 1201 ctgcatttgg agctgtggtt tgcttaggcc tcttgtggta ccttgtcaca tagctctgta 1261 tctcctgaca ggctcatgca tttaatgaga acaattggac atggttgcaa gagacccctc 1321 tattttcaca gctaccaact gctttcttgc tctctcagtg acaagtatgg atcacagaag 1381 ccaaagttga cccaggcatc aaaaacagga gccaagtttg cccagtactt ttctgccttt 1441 tctcattgaa catcgtctag gtaaggctgc aataaaagag ctccagaatc actctggatg 1501 ttatagaaaa ggatttgttt cttgtgccag ctttgttttg agaacaagac catgccaaag 1561 cattagactt ggcatgtccg tcaatcctgt agccagccgt aaaagagaac tgagctaatg 1621 ctgactgaga aggacaagca gatgatggag agtacaggta actttctttt cctgattgtt 1681 actcagaggc tcactgagca agcttattcc ttactagggt aaatgttttg ttggttatat 1741 caaactgcaa tgtaactaat attgtcttca ttttactgtt atttgaaaaa aaaaatcaaa 1801 aaaaatctct tgaatctaga ccttaaaaaa gcctgttatt tcccttacat caactcaatg 1861 gaaatcttgt tatttccaaa gtaatacaga tttttcccca gaggtgatac ttcttaatag 1921 cctatactga aattcagacc tggaaattgc ttttgtgttc ccatgaaaaa aaaatagtgc 1981 agtacatatt ccatgttaca tgtactcttt agacataatt ttcaggttaa tcagtactaa 2041 aggagaattc ttataaagct tacaccttta aaattttact aggtgagtgg ctcttcagta 2101 gtcagacaac ctgtacagac cagttgtcag cgtaataata tttgagcgtt gagataattc 2161 agtattgtgt tttttttctt tatagttggg ttggcttttt gttatcccat tcctttgcta 2221 acagtttcct tctactgtac taacctgata attagggaga aattgcaaca aatcttgaca 2281 tggtcacata cttcagaact ttaaatcgtc agtttaatta tgaagaaatc agcatttgtt 2341 aacaaagtaa taaaatgcag aaataggtaa taagtcccca agtgggagac catacatgct 2401 gctactaatc ttgcaaagga atgtttactc tacataaaca gttagctgtt tatataattt 2461 gcataaacaa tataaatgcc caagttaaga aaatatgctt tgaaaaataa ttttagtatt 2521 catttttctt tcccttcctc tttaatgaaa cgtaagaggt ggaaagccaa gccttccctt 2581 tgtgcctcat ttaagcaaat ttctattctg aatttctgta gaatgaaggc tgagaaaatt 2641 gtcattaata tcagaggaac tcagtatagt ccatgtatta tcaaatatga ctaatgagtg 2701 ctgctacaat ctgttatatc tatagataac tctgctgatg tcacattggt cttatggccc 2761 atgtagttat gtggaccaca gtacagtgca tgctaacaga aatgaaggca tagaggggag 2821 ctaattttcc ccatggaaca tccaggtgtg tccttgttct ggatacaagt gtctgagacc 2881 ctgggggccc acagtatgtg cttgacctat tggaaaccct tgatactccc agactgtcag 2941 atccttctcc tggcagctgc caactcagtt tctcttcctt ggagaaggat cctcagtctg 3001 cagtgctctc tgtctgtgtt accctttttc aacacttcct tgcactttct catatgtttc 3061 ttaatgttgc tccacttcct ttgtgggttt cccatctagt tagacagact ctaagcctgt 3121 cagcacagga aatatataat tttcataaaa gaccaccact agaactagat gattcacagg 3181 aagtttttaa gccaagggag ataattttaa attagagttt ggttattttt ctttatttgt 3241 agaagaaaca aaaataattt tgggcactag aaatgtaact acaacccaat gtttttgtga 3301 actttcaaat gtgacaccca tctacaaaga agggcaggaa gtaggatccg gggaattaca 3361 ggcctgccag tctgacctcg gtgacgagga aggtcatgga gcagatcatc ctgagtgcca 3421 tcaggtggca cttataagac aaccaagaga ttaggcccag tcagcagggg tttatgaaag 3481 gcaggtcctg attgaccaac ctgatctcct tctatgacaa ggtaacctgc tggatggcca 3541 ggcccaaaga gttgtggtga acagagtcat atccagttgg cggcaggtca tgagtggtgt 3601 tccccagggc tcagtattgg ggccagttgt gtttagcatc tttatcaatg atctggatga 3661 ggggactgag tgcaccctta gtaagtttgc agatgtggag tgttgatctg ctggagggta 3721 ggaaggctat acagagggat ctggaccagc tggatcgttg ggctgaggcc aattgcatga 3781 ggcttaacaa ggccaagtac caggtcctgc atctgggtca caacaacccc atgcaatgct 3841 acaggctcgg ggaagagtgt ctggaaagct gcctggtgga aaaggaactg ggggtgttga 3901 ttgacagcca gctgaatatg agccagcagt atgcccaggc caacagcatc ctggcttgta 3961 tcaggaatag tgtgtccagc aggactaggg aagtgatttt tccactgtac tcggcactgg 4021 tgaggcccca tcttgaatac tgtgttaagt tttaggcccc tcactataga aaagacattg 4081 aggtactaga gagagttaag aggagggcaa cgaatctggt gaggggcctg gagcacaagt 4141 cttatgagga gtggttgagg gtactggggc tgtttagcct tgagaaaagg aggcagaggg 4201 gagaccttat tgctctctac agctacctga aaggaggttt tagcatggag ggtgttggtc 4261 tcttctccca agtagcaagt gataggacaa gaggaaatgg cctcaagttg caccagggaa 4321 ggttcggatt gaatattagg aaaaaattct tcacagaaag ggttgcaaag cagtggaaca 4381 ggctgccaat gaagtggtgg agtcaccatc cctggaggta tttaaaaggc ttatagacaa 4441 agttcttagg gacatggttt agtgctaggg ttaggttatg gttggactcg atgatcctgg 4501 gtgtctcttt caactgaaac gattctataa ttccactcat tttaaaatag tacaaataga 4561 cttttttctt tgcatgcttt tttctaaggg aagcaaatta cattaatcaa attataaacc 4621 actcaaaacc atcagtttat gaaaaaaatg ctgaaaatat tttatttcta tctatactgc 4681 tgggccattc ccatgacagc tgtgcttaaa aggatcttat actgacagat gtcttctgag 4741 tagaaatata cctatgtgga cgggttttga tagataaaga tttgttgctg aattagtcag 4801 gctcaaagga atctcaaggc ctcnnnnnnn nnnnnnnnnn nnnnnnnngc atggcgtgaa 4861 tcatcggacg tatcatcagt gagactccag agcacggaca gcccacgata cctatttaac 4921 gaatccatgc ttggagcgtg gacgtgtgat tagaatatag ttatgtatat aaggagactt 4981 gtttctgtaa taaatggctt agcgtgat // LOCUS BMBC01000007 5009 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_7. ACCESSION BMBC01000007 BMBC01000000 VERSION BMBC01000007.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5009) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5009 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_7" assembly_gap 242..352 /estimated_length=111 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3461..3470 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1061 a 1606 c 1430 g 791 t ORIGIN 1 gagcagcgct gggaaaggct gtggccgcct ggggaacagc gctggttgtg tgagcaccga 61 ggccgcgggt gacagcccca aacagcccag ggatgcgagc tctggagctc ctcacactcc 121 gacctccgcc ccccacacca tatggaaact atagttccaa aggattactg ccagacgcct 181 ctcccgtttg tcattttgtg tgattgtcac atgttgccat ggtgaaatac actgctttgc 241 annnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngggaacac 361 ccagttctgg ggagcatcca gctctgggca gcactcaacc cagggaacac ccagcccggg 421 gagcacccag cccggggagc accagtgctc tcctacctca ccagagcctc cttgagcctc 481 gcgttctgct cctccagctg cttcacctgg taactggagg cggccccgtc cgagcctgcg 541 gcagaaagga cacgctgttc cgcctgcgca gccacagcag ctgctgccgg agcccgttcc 601 cgcaccgccg ggacggggca gtcgtgcagg acagctgagg ggaatacatc gggccctctg 661 cagccaacca aaagcgaagc cttgtgccca tcaccggcgt ttgcaggctg agattcccca 721 gcggcaccag agccagctgt gcagatgagg aacctccaca gcgacccgtg gaccatcccg 781 agcagccagc aggccacggc acagccacac agcgctggag accaagagct cccagctcct 841 gaccctcccg ctcagtgaca caaactccga ccaaggccac ggctccccgc agccgcttcc 901 cgccctggca gctcctcctg ccccgtgttt gccgcagccc ccctgcctgc gggttggggc 961 tggttaccag gtgcgtgccg gcactggtgt tcaaagaccg gctcctttcc tgctgggtgt 1021 gatttctaaa gctcaccttg aatcgcaaga gccaagagac cccagggaac ccaaacaagg 1081 gcaacgtgct ggttctgagg ctgctcagtg caaagctgcg aggtgggatc agtaacaaaa 1141 gctgctgtgt tacctcccac agaaagtgtg tcccatcaca caccttttgg ggtgggatcc 1201 cccaacccca gggacaatga gaagcgttaa aacgaaggct gagcttttcc aagcccagga 1261 caaggacacc tgtccccagg gtcagaagcc tacggctcca tctcggccct cccagcgggg 1321 ctgggaccca aaagatgaag ctgagctgct gctgactgcc cggctgtgac agtggcatct 1381 gtgccaccca gcggggctgt ggacacggca ggaacctccc gcggctgttg gaaacggcag 1441 aggcgcagcc tcagcccgcg cacagcgaga gccagcgctg cccacagcag gcaccgctct 1501 gtcccgcgag gggctgcggg gaccccccag ccgccccctt cccacctttc tcctcgatct 1561 cgtgcttcag gatctccagg tccatggtga gatattccac cttctccttc agggagtcca 1621 cctcctgctg cagggactcg gctcgctcct cggccatctc cttgtccagc gtggccatct 1681 cgatggcgtc ggccgtgtcc gccatctcct ccatgtagcg ctccttggct tccagggcat 1741 ccttggcctc ctgcggggca cacggggtga gacctgcccg gggagcgcgg ggccgacagc 1801 ggacagagcc ctctcaccac cagccaggcc aggctggtct gtcctcccaa gggaggccca 1861 tggccaatta acagccgctc gctgggctga gaggggccgg cccgccagcg ccggcgccca 1921 tcaccctcct cacagcacag cccagcagga aaccggctgc aggcatgaca tggatgtgaa 1981 ggcagaaaat ccttaggctt gtactggagc agacaatcaa acaaaccact ggggaaacag 2041 agcaagaatc cacccgggaa aaccagggca gagaggcaga ggctgctttg ccagcacggc 2101 caggtcccag gagcggggac aagaaccggg ccctggccct ggggagggac aagggaagac 2161 cccacctgca gcgacacctc aaacgacacc caggggctca gcaggagcca agaggccacg 2221 ggagaaatga gagaccttct ccttaacgag ccacaccaca gttaattagc tgcaaagccc 2281 tgcggcgttc gctgcctcat gcccacagcc cagcggggca ggagctcgga gtgcattagt 2341 taaggagatg aggtttaact aattaaagtc tgtgttagaa agtcaggatc aggactccct 2401 gggaagccaa tgcagagtgg aacccaggcc agaggggcca ggagcgacac ggcgcccagg 2461 gcagggacgc ggtgtgcagg aagggacgcg gtgcgcagga agggacgcgg tgcgcagggc 2521 agggatgccg tgtgcaggaa aggacacggt gcgcagggca gggatgcggt gcgcaggaag 2581 ggacgcggtg cgcagagcag ggacgcggtg cgcaggaagg gacgcggtgc gcaggaaggg 2641 acgcggtgcg cagggcaggg acgcggtgcg caggaaggga cgcggtgcgc aggaagggac 2701 gcggtgcgca ggaagggacg cggtgcgcag ggcagggacg cggtgcgcag gaagggacgc 2761 ggtgcgcagg gcagggacgc agtgtgcagg aaaggacacg gtgcgcaggg cagggatgca 2821 gtgcgcaggg aacagatgcg gtgcacagga agggacgcag tgcgcgggga acagatgcag 2881 tgcacacaaa gggatgcggt gcgcagggaa cagatgcagt gcacagggaa gggacgcagt 2941 gtgcaggaag ggagcccccc cgacgtcccc atcccggaag ggacaggact cgtgtggccg 3001 tgctccgggg ggctgggagc cccatagagc ggctgctcga ggcccagctg gagccccaca 3061 catccctggg gatggagaca cccaacaccc ctgagcgccc tgcgctggtg actgatcatc 3121 tccacaggaa aagggggttt cttatgttta aaagcaattt cctgcatttc agtttgcgcc 3181 catcttctcc cactctgggt gggcaccaca ggaaggattg ggctccagct tctttccttc 3241 cccgtcaggt attcacacca ccgatgagat gccaggctcc ctcggacagc ccgcgcacgc 3301 ccgtcacgac gtccccagct cggacggggc tcccgagcgc cgcggccgtc ccagccctgt 3361 ccagctcact cagcccggct cccaaacaga gtccgttccc atgtcctgag aacctcctgt 3421 ccgtctgtcc agccctccag ggctggtgac tccagcactg nnnnnnnnnn aagaaattgt 3481 tcccacatcc aacctcaacc tcccctgggc aacttgaggc cgtttcctct gctcctggcg 3541 cttgtccctc gtctcgaact tgccagttca agatctccag gtgttccgct ccagcttgtg 3601 gaggtgggac gggcagttta ttggcaggtc tggaatgtga ccagtgtccc ccagtgctgg 3661 cagattaaac cggggacaca cggctgatgc cgcacgggga cgcccgtcct gccagcccgg 3721 tgtgcaacgt gccctcaacc accgcggtcg ctgtccccaa atgtccaagg acatcacctc 3781 tacccccacc ttgccttacc ccgcctgaca ctgagtgttg cagtgatgga ggaatcgccc 3841 catggacagg ccagacgttc acgtggcaca gaacagccag acgtcaggtc cgcggccggc 3901 gtaggccccg gcacgtatta gaagacaagt cgggccagcc cacggctgaa tggcagctgg 3961 tatctcaggc gccccccgcg cacgtttggc ggctgcaccg gccccgcagc cgcgcgtccc 4021 tgccagcccc cgccccccgg ttctcacctt cttggcctcc ttgagccgct tctgcagctc 4081 ggcctgctgc tcctgcatct tgctcttcca ctcctgcacc tgctccagct ggatcttgta 4141 cttctccagc tctttgagct tcgctttgtc ttcatttcgc tttatcttca gagtctccaa 4201 tttctcctcc aggtccctga cttgagagcg caagttctcc tcctcctgca acaccaaacc 4261 aagaatgacc aacaggagca gcaacgccct ttggagcgag ctccgggcac gctgcttcgc 4321 cccacagagc ccaacccagc tggtgttcgg catcaccgct ggacacttcc acaggcgtca 4381 ctctacactg gcagctacac agtctgtctg ttattttaat ctgttgacta tcaatgttcc 4441 ttgacacgct gacataaacc ttctggccag caaaaggtcc tgagcacgtt ggatttgact 4501 tcaccaggat ctgtggatgc ctaaatcctt taaaaagaaa ataaacgcat aaacccagca 4561 ctaacaggtc cgagctcccc cttcagtaac ccgctggtgc tcagagcaga cagcgacatg 4621 caagaaacac attctcgtgg tcagaaatgg atcttacaga gaggttctaa cacacaccgt 4681 gcaggagctc agtgggttta gtagttagtg tgtgattcag cagcacaggg acacacacgt 4741 ggggcaatcc agcagcacgg ggacacacac acacacacac acacacacac gtggggcaat 4801 ccagcagcac ggggacacac acacacacac acacacacac acacacacac gtggggcaat 4861 ccagcagcac aggcacacac acacacacac acacaccaca cacacacaca cgtggggcaa 4921 tccagcagca caggcgcaca cacacgcaca cacacacaca cacggggcaa tccagcagca 4981 cggggacaca cacacacaca cacacacac // LOCUS BMBC01000008 5009 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_8. ACCESSION BMBC01000008 BMBC01000000 VERSION BMBC01000008.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5009) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5009 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_8" assembly_gap 265..292 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1520 a 1010 c 1007 g 1442 t ORIGIN 1 tcgcggatgc ttgatggatg gttcggcttg ccacagagcc acgttcagat cactccaaga 61 aagatgccac ttagccgagt gtggtggcat ggcctcatca acttcctcag tctaatctgg 121 tggcttgtaa tagcacctac aacagtatca tccctgccag cctgcccctt aattctgacc 181 catacactct catcttgctc ctcatccgct cctgggcaga atttagtaca ttgtagttgc 241 tctctcacat agagagcaac tccannnnnn nnnnnnnnnn nnnnnnnnnn nncccaccat 301 gtttctgtaa ttgccaccag atcataatct cccaaccgaa cataggattc taactcctcc 361 tgcttattcc ccatgctgcg cgcattggtg tgcaggcatt tcagggagcg agcagagcac 421 accaatttct ccctaggggc aaaggaggcc acccggtcct catcagtttt agaatgctgc 481 cccagtggga caagcccagc tacaacccca tcccccttcg agcctagttt aaagctttcc 541 aaatgagccc agctaattcc tgccccacca tccttttgcc cctgcgagat aaaccattcc 601 catgtatcac tgtttggact ggaatcttat caaaccagcc actatcaaaa aatccaaagc 661 cctgcctgta gcaccgatat tggagccaag catttagaga ctgtattttc ctattccatc 721 ccacatcatc acttgaagat ggaaggagtg aagaaaaggt cacttgagcc cctgagtctt 781 tcaccatcct tcccaagacc ttgaaatgtt tcttcattcc cctcagacta tgggaagcag 841 cttccttccc atctgtctgg aagaccagca gcgggtagta gtctgtcggg tgcaccagtt 901 tggggagctc nngggctcca ggtagactac aaacttccct aagatgaggg tcaactctgc 961 atattggacc ctctgttcct ttcagaagga acagaaagga acacctgggg aggaaaaagc 1021 ccaggtacca gtacaggtta ggggcagacc tgttggaaag cagcactgca gagaagggct 1081 tgagagtttt ggtcatcaac aagttgataa tgagtcaaca atgtgccttt gtggccaaga 1141 aggccaacag tatcctgggg tgcattagga agtgtgccta ggaggacgag gtagggtagc 1201 ctcctcctct actttgccct ggtgaggaca catctgaagt actgtttcca gttctgggct 1261 gcccagttta agaaggacaa gtatttctgg aggcaatcca gcagtgggct acaaacatga 1321 ttaggggcct agaacacctt ttttatgagg agaggctgag agagctgggt ctgttcagcc 1381 tggagaagag aaaactaaga agggatctca tcaatgttta taaatatctc aagggtgggt 1441 gtcaagagga cgggaccaga ctcttttcag aagtgcccaa tgataggatg aggggcaatg 1501 ggcacaggct gaagcaaagg gggttccatc tgaatatgaa gaaaaacttt accttgggag 1561 tgacaaagca ctggaacagg ctgctcagag aggttatgga gtgtccttct ctggagacat 1621 tcaaaacctt cctgggcaca ttcctgtgca atttgctcta ggtgaaccta ctttatcagg 1681 tgggttggac tggatgatct ccagaagtcc cttctgttcc tacagacttc ttcgatctct 1741 attttacagc aggtcacaca ttattaccag gtggatcctt catactcaaa ttgaaaggaa 1801 catttcataa tatcttcaac agcagcactt tccttgaaca attatactga tcacaggcac 1861 aggaagagct acttgctaag agagcgacca aaacctttca acagcatctt ccctgagttc 1921 tgcatctgag aaatatttta caatgcagtt ataccctcat tagcaagaaa agagactcct 1981 ctccttgtat tactcccctt taaaatttca atagaaggaa gaaccaaaat aagcaattaa 2041 tttgaaattt ggttagaaaa tacactataa acacttagct tgatcttgaa gtttaagaaa 2101 ggggagtgga agtttaaata atctattaca ggagaaatac tgatttatgg ccattgtgga 2161 ggcacataga gggagtgcct aaatgagata atatgggata gtttttccac tacagagaaa 2221 aacaaatcaa agcagaaaga tgacgcttga taaaaccaaa gtttttttaa cagaagtgtc 2281 aagctcctga cagaagctgt gagagcacag tcatacttct gtaacatgtg ctttcagatt 2341 ttgaaaatat gtgctgaaga tctcattcac tttctcacac ttcgtggcct ctggaaaatt 2401 tttatttcac tacatgactt aaccattttt tgaactggat taagcttttg gccttctgtg 2461 tgtcctgtgg tactgtgttc caaagattaa ttattcatta ttttaaaaat ctgctttact 2521 taacgaggtc taaacttcac agaatcacag agcgttaggg attgtaaggg acctcaaaag 2581 atcatctagt ccaatctccc tgccagagca ggaacactta gatgaggcta cacaggaatg 2641 tgtccagatg ggttttgaat gtctgcagag taggagactc cacaactgcc ctgagcagtc 2701 tgttccaacg ctctgttacc cttatggaga agaagtttct tctcaagttt aagtggaacc 2761 tcttgtgttc cagtttgaac ccattacccc tagtcctact tgctgcctaa tgaagttatt 2821 tggtatctta atttgattct tgtgttatga tatttattga gcagtatttc tgtcattcat 2881 cattttatat atttaaaatc cagagagcaa tagtttcttt aattgcacta aatgcttttt 2941 ttgtttgatt ttggttttgg ttttggtttt gttttgtttt gtttttcaaa taatgcattg 3001 gttatgtgag aatcagtgaa ggagaaatac aattttcaac caaggagttt tttaaaactc 3061 ccctcagcaa aactgagcta tgtctggttg tggctataac taaatcacta tttgtttacc 3121 taacatgtgc ataaaaacct ctccaacaac tttttaccat gggcatattt tgaagtgttt 3181 cacaaagtct ctgtaaattt aaggccttac actaaagtag aaatgaaaat gtgaaatttg 3241 ttttattatt tttgtttagg tctctcacag taaacacaga ttctgcaaaa acaactacag 3301 tgagacctca tgtagttgtg atgaaaagga tcggaaacct tacattcagt acaattaaac 3361 tgcagctgct tcactaatat ttagcttgtt tgttttacca tggtgaaggc gaaaaataaa 3421 tccctcttct tcccttgaca aaaagaaatg cttctagtga agtgcaatca cttacagaga 3481 ataatttaaa aatattttta acaacctaca ggatatgtac atattaatat aaggtaaaat 3541 aatatctgca agtacacaag taatctcagt gaactacttc agtactaaat gcagatcttc 3601 tgttgggcta gcataatata ttaactctct tgaggcttga atttttcagt tcgtgaaaaa 3661 tatccaagta tttttgaagg aggtgacgga gcaaaacaat acatctgttt gttctgagaa 3721 ctaactttga aaatgggata aatgctgcag tgtaaagctc aagtttttca tacaaaaact 3781 gtctagtaag gtttatacag gtgttgatag gtagcctaaa gcatacacta gaaggcgacg 3841 atgtatcctg cctgcctgtc tgatggatgg gtttttttta ccttgcttag tctctgagca 3901 aatgggaaca aagagatact acagaagtgt gaaatgtttt ctgtatgggc tgataagaag 3961 atatgaatat tagcatattc taaaaactaa aacaaaacta taacaacaaa aataaaacaa 4021 caacatcccc caaagaaccc aactctgatg tcagagcttg ctcttacatg aaaataattc 4081 tccaccctta aagaattctg ataaaggcaa ttcatttgac atttattgaa caggtcttcc 4141 aacatggtat ctggtctaca taaactctaa aaatcaagtc acttcggtat tttagcttag 4201 agatacatac gtccctcatg cctcatctat ttagagaaca aatactagca taactggttt 4261 gtaaagaagt cagtaagatt ttcttttcag cttgggatgt aactattcct ttgaaagtta 4321 ttgtaattcc caaggatgtc tttaatgagt ggatgattta acatcaccac aatataatca 4381 aaccacacca tatcaaaaaa aaaaaaagta ttatccatca ttttgtaacc tgaatggccc 4441 atggggccac atttgtgtta cattactttt agctctctag actgacttgt ttgcagcgaa 4501 aatttaagac tacggcctca attctgatct ggtttcatgt atgagcatgg atgctctact 4561 caatcaaaaa ttgggaagct actgaagtac tcagatgtcc tcactccaac tttaccattg 4621 acttattctt gccataaagg acagatcact actcagaatc cagccctatg gatccaaatg 4681 ccatgcaagt ttacttaaaa tgttatctag ggtagggtag aaagggcaaa catgtttcgt 4741 ctttgatata tgacagcttg ctaaagatag ttttgcctta ccactatgct acttaacaat 4801 tgagcacttt gaaaactcag aaaattaatc agtgaataac tttttaaatt gagttaggtg 4861 ctaattagca gcaactcaaa cattttcaca actttgaagt cacaactgag gtctctgcaa 4921 ttagaaaatt aaaagaagag aaaagaaaga agagggagag ggagagggag agggagaggg 4981 agagggagag ggagagggag agggagagg // LOCUS BMBC01000009 5009 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_9. ACCESSION BMBC01000009 BMBC01000000 VERSION BMBC01000009.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5009) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5009 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_9" BASE COUNT 775 a 2087 c 1114 g 1033 t ORIGIN 1 ccaccaacat ccacccccat tgacgttctc cacccccact gacgttctcc acccccactg 61 acgttctcca cccccccgcc ccaccccccc cccgcccccc cgccccacgc acctctgggt 121 gtcgcagtgg gcggcggtca gcacccagcg gcgccccagc aggacccccc cgcagtggat 181 gttgcgctgg ggtcccagca gcaccacctg gtacgggtgg cgcctcttgg ggcagttctg 241 cccgtgcacg atgcgcgtct cgtcccccgc ggccgctggg gggcgccggg ggtcagggcc 301 aatgcctccc agtgaccccc agcgcacccc agtgcctccc agtgccctcc agtccttccc 361 agtgcctccc agtgccatcc agtgccatcc cggtcccttc ccagtgcctc ccagtgcccc 421 ccagtccctc cccagtatgt cccagtgccc tccagtccct tctcattccc ttcccagtgc 481 ctcccagtgc cctccaatcc ttcccagtgc ctcccagtgc catccagtgc cttcccggtc 541 ccttcccagt gccctccagt ccttcccagt gcctcccagt gccatccagt gccttcccag 601 tgcatcccag tgccctccag ttccttctca ttcccttctc agtgccttcc agtacatccc 661 agtgcccccc agcgcatccc agtgcccccc agtgcgtccc agtgcccccc agtgcgtccc 721 agtgcccccc agtgcgtccc cagtatgtcc cagtgccctc cagtcccttc tcattccctt 781 cccagtgcat cccagtgccc tccagttcct tcccagtgcc tcccagtgat tcccagtgcc 841 ctccagtccc gtcccagtgc ctcacagtgc ccctcagtgc atcccagtgt gcccccgtgc 901 accccagtgc cccccagtgc atcccagtga ctcctagtgc cctccagttc cttcccagtg 961 cattccagtg actcccagtg ctccccagtg catccccgtg actcccagtg cccgtcagtc 1021 ccttcccagt atgtcccagt gccctccagt tccttctcat tcccttccca gtgcctccca 1081 gtgccctcca gtccttccca gtacatccca gtgcctccca gtgtgtccca gtgcctccca 1141 gtgccttccc agtgcctccc cagtgtgtcc cagtgccctc cagtgcctcc aagtgcatcc 1201 cagtgcccca cagtacatcc cagtgtgtcc cagtacatcc cagtgcctcc cagtgccctc 1261 cagttccttc ccagtccctt cccagtgtgt cccactgccc tccagtccct cccagtctgt 1321 tcccagtgtg tcccagtgcc ctctagttcc ttcccaatac gtcccagtgc ccttcagtcc 1381 tgtcccagtg ccctccagtc ccttcccagt gcctcccagt gccctccagt gccgtcccac 1441 tgcatcccag tggatcccag tgccctccag ttccttccca gtgccctcca gtcccatctc 1501 gctgcatccc agtgccctcc agtcccctcc cagtgtgtcc cagtgccctc cagtcccttc 1561 tcagtccctt cccagtgcat cccagtgccc tccagtaccc tcccagtgcc ttgcagttat 1621 ttcccagtgc tccccagtat caccccattt cctcccaccg cctgccagct cttcccagta 1681 gcctccagtt ccctcccagt gcctttccag tgcctcccag tcccctccca gtatccctca 1741 gcacctccca gtgcttcctc attccttccc acgtgctacc agtttgctcc cagtgccccc 1801 agttcacatc ctgctccttc ccagtaccct cccagtaccc tccactgccc cctcattcct 1861 ttctatgctc gaccagtgct cccagtcctt cccagtacct cctctcaccc acaccagtat 1921 gatcctgctg cctcccagtg tccccagttc acctgcagct ctttcccagc actccccagt 1981 gcctcccagt ctgtctccca gcagccccca gtactcccca gttccatccc agtaacaccc 2041 agtgccctcc tagcacccac cagtaccctc ccagtgctcc ccaagtcctt cccagtgctt 2101 tccagttcct cccagtgccc cccagtgccc tccagtgccc tcccagtgcc ccacagcgcc 2161 ttcccagtga atcccagtgc cccctaggat ccccccagtc cctcccagtt ctccccagct 2221 ccctcccaat gccccatagc gctttcccag tgcctcccag tgccccccag tccctcccag 2281 ttgcccctag ttcacccagt ccatctcagt tcctcccagt gacccccagt tccctcccag 2341 cttcccccct agtgccttcc cagtgccccc agtccctccc agtactttcc caatgcctcc 2401 cagtgccctc cagttccctc ccagtgcccc atagcacctt cccaatgccc catagcgctt 2461 tcccagtccc tcccagtgct ttcccaatgc ctcccagtga cccccccagt ccctcccagt 2521 gctttcccaa tgcctcccag tgtcctccaa tcccctccca gtgcccccta gtgccttccc 2581 agtgcctccc agtgtcccca gtgccctccc agttttaccc ccagctccct cccagtgccc 2641 catagcactt ccccagtgcc tcccagtgcc ccccagtccc ctccccgttc cccccaatcc 2701 cctcccagtt gctcccagtg ctcccagcgc tcaccagtga gcagcagcag cagcggcagc 2761 agtcgcttca tgacggcggg aggaggagga ggctgagcag gcaacgccgg atcgggcccc 2821 ttaaatcccc gcgggccccg ggagggatcg ggacgcaccc gctgaggggg cggggccacg 2881 cctggccacg cccacctggg ggggagtggg gggggggcgg caccagtgct cctagtgaca 2941 gtccggatcc ttcccagtgt acccagtgct cccagtaaaa ccctggagcc ttcccagtgc 3001 tcccagtaac agcctggagc cttctcagtt gtcccaatac aaccctggag ccatcccagt 3061 tctcccagta aaaccctgga ggcttcccag tactcccagt gctcccagta aagccttgga 3121 gtcttcccag tgctcccagt gctcccagta acagcctgga gccttcccag tgctcccagt 3181 acaaccctgg agctttccca gtactcccag tactcccagt aaagccttga agttttccca 3241 gtgctcccag tgctcccagt aacagcctgg agccttccca gtgctcccag tgctccgagt 3301 tcaatcctgg agccttccca gtgctcccag taacagcctg gagccttcct agtgctccca 3361 gtacaaccct ggagccttcc cagtgttccc agtaaagcct tggagttttc ccagtgctcc 3421 cagtgctccc agtaacagcc cggagccttc ccagtgctcc cagtgttccc agtacaaccc 3481 tggagccttc ccagtgctcc cagtaacagc ctggagcctt cccagttctc ccagtacaac 3541 cctgcagctt tcccagtgct cccagtacca ccctagaacc ttcccagtgc tcccagtact 3601 cccagtacaa ccctggagcc ttcccagtgc tcccagcagc agcctggagc cttcccagtt 3661 ctcccagtac aaccctggag ccttcccagt gctcccagta caatcccaga gccttcccag 3721 tgctcccagt aataccttgg agccttccca gtcctcccag tacaaccctg gagccttccc 3781 agtgctccca gtacaatccc agagccttcc cagtgctccc agtaatacct tggagccttc 3841 ccagtcctcc cagtacaacc ccggagcctt cccagtgttc ccagtacctc ccagtacctc 3901 ccagtgcctc ccactatctc ctggggcctt cccagtgcct cccagtgctg acttagggcc 3961 atcccagtgc ctcccagtgt caatctgagg acttcccagt gcctcccagt gccttccagt 4021 gcctcccagt gttggcccaa ggccctccca gtgcctccca gtaccccctg gagccttccc 4081 agtgcctccc agtgccttcc cagtgccctc ccggtgcctt cccagttcct cccagtgcct 4141 tcccagtgcc ttcccagtgc ctcccagtgt ctcccagtga cctcccagtg ccttcccagt 4201 gcctcccagt tcctcccagt atctcccagt gccttcccag tgtctcccag tgcctcccag 4261 tgccctccca gtaccatccc agttcacccc cagacactga gaccccaaaa aagtgcagag 4321 agggacccca ggttggggga gggggacccc aaattgggga tggagccaaa cgtgcctcag 4381 tttccccaga atcacttaat gagggggcgt ggcctggtgt gggggtgggc ggggccaaaa 4441 cggggtgggg tggggtgggg accccaaagg cgtgggtggc cccgattggc cggtgtcacc 4501 ggggtcacct gccggtggtg acaccgagca ggaagtcccc ggggctcccc caccctgtcc 4561 ccaccctctg tctgtctgtc tgtctgtccg ttcgcccccg gtggcctcgg tgacacctcc 4621 gggtccccaa agctgcgggt gggggtgatg ccacccctgt gcgtgccccg tgtcacctgc 4681 tgccatatgt ccccgtgtcc ccatcccggt gtccccaagc cggatcgttt tgtcacctgc 4741 cgggaactgg ggtgacaggt ttggggacga ggaggtggcg gcggggagga aggtttgggt 4801 tggggaccgt ggggacgggg tggggacaag agatggggac aagggacagg gacaagatag 4861 ggacaaggga tgggaacaag ggacggggat ggggacaagg gacagggttg gggacaagag 4921 atggggacaa gggacaagga acaggggtgg ggacaaggga cagggacaag atagggacaa 4981 gggatgggga tggggacaag ggacagggc // LOCUS BMBC01000010 5010 bp DNA linear VRT 22-AUG-2020 DEFINITION Columba janthina nitens DNA, Cojn_10. ACCESSION BMBC01000010 BMBC01000000 VERSION BMBC01000010.1 DBLINK BioProject:PRJDB10189 BioSample:SAMD00237431 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Columba janthina nitens ORGANISM Columba janthina nitens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. REFERENCE 1 (bases 1 to 5010) AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M. and Endoh,D. TITLE Draft genome sequence of Japanese wood pigeon JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_janthina_scaffold_01 Genome Coverage :: 60X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5010 /collection_date="2019-08-19" /geo_loc_name="Japan:Tokyo, Ogasawara" /db_xref="taxon:985682" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 5773A" /organism="Columba janthina nitens" /sub_species="nitenss" /submitter_seqid="Cojn_10" assembly_gap 2548..2722 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1133 a 1132 c 1463 g 1107 t ORIGIN 1 gtcacttttt acttctgctg gttaatatct agtgaaattg tgaaaaactg catgtttcac 61 tcctgaagtt aaatatctgt ttggttgatt ttatccagac atgcaatatt ttcacaatgc 121 cttgtaaatg gtatttacag accccagtct cgtttaccca gcgcccatag tgcagtttcc 181 tcagaactcc gcgcgtctgt gccgtcgcgt ttttcagttg cgatgggcaa ccttaggagt 241 aatcatttaa attttcactt acatactatc ccagaaaccg gctcctttat ttcagagact 301 ttctacagga tacatttcta gaacacgttc ctttcccggc agaacacttg gaatccagag 361 gatacaccgt gccttagaag ctgcaatatt aatacctcca ttcctcaaca cctttttctg 421 cttcagctgt cccatatttg gaaacaacga ggtagacagg agctcagcaa cccccatcag 481 agcagcagga acccctcacc accttgagct gtccctctgt ccttccactt ccatagtgct 541 tgtccgtctg tgcgcagcct ctgtcaccaa agcagctgcc cagcgtgtcc ctcggctctc 601 ccccgggtcg gcactgccca tcgccaccgg acacgcgcgg aggagcagcg tggtggctcc 661 ggtcgtcctc tcccctgctc cagcaccacc cgaggtcccg gtcggtggtc acagactcgg 721 ggagatcccg ttggagggaa tttaatccgc cagaagacac tcccatgccg agcggctccg 781 gcgcagcccc gggagcagcg gctccttccc ggcagcagaa tgtgctgagt ctgaggagac 841 tcgacttcgc tgccgtgagt tcccgctcaa gattgggaaa cttctagaat gccaaaggca 901 attttgacat ataaaaaggg gatttagggt gtgtttaagc aattgtgaaa gctattttat 961 agctgggatt tcatcaaaac tgctcctttc acggagcttt gattggaaag atctgtatct 1021 ggagctattg gcaaccatta atgagggctg gaaatcccac gaggggctgc agaagagtgt 1081 accattgtaa aagatgattt tgaaaatgtc gtaaagatgc aagagtccac ttagtcaccg 1141 agacctgttt cgctgttctc ttattcactc tgtattgcag ggtgtgtttt aggcaggccc 1201 aaatatggca aagctaaatg gggaatctgt caacaatgcc gcactgatga aaataatgaa 1261 gcggtttcca tcttcccgcc cggccgcccc agcccgccgc cagcagggat aaaaggcagc 1321 gccggagccg cggagccaga gaggatcaca ggcacttctc tgcacaccca tccctcagca 1381 gcacagcgcc ctcgaccttt cctatcttct cggttcttga ctcgctcgga agcagcggcc 1441 atgtctcggc agtcgacctg cagaagcttt gggggtggaa gcagaagggg ctacagctct 1501 tgctcggcca tcggtggtgg ctttggagga ggtggcggcc ggagcaggat cagctacagt 1561 tcatactcct cgtccagggg aggtggagga ggtggacatt gcggggggtt tggaagcagg 1621 agcctccata acatgggtgg cagcagagga atcgccgtgg gtggatgtta cggcggtgga 1681 tatggaggca gaatgggtgg ctttggtgga ggctacggag gaggaatggg tggctatgga 1741 ggtggaatgg gcagctatgg aggaggaatg ggtggctttg gtggcggaat gggtggtggc 1801 ggaatgggtg gctttggtgg aggaatgggc ggtggtggaa tgggaagtgg gggaatgggt 1861 ggcttcggtg gccccggctt ccctgggggc atccagccgg tgcaggttga cccgagcctc 1921 ctgcgcccgg tccacgtcga gatcgacccc cagatccagc aagtcaaaaa ccaggagaag 1981 gagcagatca agaccctcaa caaccagttt gcctccttca tcgacaaggt gagcattcag 2041 ggcttgctgg gagtcgggtg tttcgagcga ctttcctgcg ctgtggaaag ggaatgtttt 2101 ttcttaccaa cgagtacttg ctgaagtttg cacgactgat gctttagcag aaagttgctg 2161 ttaaggtctg attaagtagc gctgcacagc ggacaagatt ttagagctag tgagagatta 2221 acaagatctg caggacatcc tttatattcc attgcccagt catctctcca gcctaatttc 2281 tagtgattca gggcaaagtc atcattgtac aatcagtttt caagagccct cgctaaggta 2341 cttttgtttt tgatgaaact ttatcttcaa ggaactgact ctacaaatgc ctttccacac 2401 tctcggatta ttttcatgcc aaagagagca ctgtgatgtc tccttggggg aatatccctc 2461 acaccctctg tgcgctttca ggtgcggttc ctggagcagc agaacaaggt cctggccacc 2521 aagtgggagc tgctgcagca gcaagggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2581 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2641 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2701 nnnnnnnnnn nnnnnnnnnn nngctgctga gaacgagttc gtggtgctca agaaggtgag 2761 tcacagagac ccaggagagg gaattcgtgg ggacaggaca ggctgcaaag acattggaag 2821 gaggtagcat caagatgggc atcttccacc cggaggaact ggctgtcaac agccattctg 2881 ggatggggtg aagctgttta tctatatgat ctttccttta ggacgtggac tgtgcctaca 2941 tgactaaagt agagttggaa gccaaggtgg gagctctgac agatgaaatc agcttcctga 3001 ggtgcatcta cgaggaggta agagctctcc cttcccctgg gctggctggg gttgcaatga 3061 ggtgtgtggt gaccaaagac actggggttg gagtgggagc ccaagtggat ttagtcttga 3121 cagtaacttg ggcgcctgtc ttggctgcag gagctgtctc agatgcagac gatcagccgg 3181 gacctgtcgg tggtggtgtc catggacaac aaccgccacc tggacctgga cagcatcatc 3241 gaggaggtca ggcggcagta cgagcagatc gcgcagagca gccgggccga ggccgaggcg 3301 tggtaccaga gccgggtgag tggggacggt gggagctgct ggctgcctcc ctcgccacag 3361 aggaagggaa cctcctgaga tctgggtggg tcgtgtcact gatggtggct ttgtctccac 3421 acctcagtat gaagagctgc agaacactgc tggaagacac ggcgacagcc tccgcaacac 3481 caagatcgag atccaagagc tgaccaggaa catccagagg ctgcgggcgg agatcgagaa 3541 tgtgaagaag caggtagggg ctcctcagca tcccgtgggg tgatggcacc aggctggctc 3601 acagctgagc tcggtggtga tctaaggaga ctgatgattc ctgcctattg tccatcccgt 3661 ttgtgccttg aggacagatc cagcggagcc tttgcagacg agacctgaga actgtttcct 3721 tctctttctt gcgcagaacc agcagctgca gtcggcgatt gccgaggccg aggagcgggg 3781 tgagatggcg ctcaaggatg ccaggaaaaa actggaggag ctggaatgtg ccctgaacaa 3841 agacaaggag gagctggctc gcctgctgaa ggagtaccag gagctgctga acatcaagat 3901 cgcgctggac gtggagatcg ccatgtacag gaagctgctg gagggagagg agaacaggtg 3961 cctcatttct ttcctgtgtc tttatctgct ttctggacaa attgtactat tggtgggtag 4021 aatctttgca tgcgctctaa ggatacattt tgcatcactc atgctctatt gattagcatt 4081 aaatggaaat gggttttgta tttcttctaa gaatgttaag ttcaagattg ctcatttatt 4141 ttaaagaata attgagaaat tcgtaaagag tgggaaatat agaccttgta aaaaaggaag 4201 aaaattcagg aacaaagttt ttacactgaa agtgttgaag acccggccca ggttggccag 4261 agagggggtg gatgaaccat ccctggagac atcccaggcc aggctggacg gggtctgagc 4321 aacctgagcc agtgaagatg tccctgtcac ggcaggggga cctgggggag ctgggaaggt 4381 ccttcagccc aaactgttct gtgattctat gaaagaaagg gaaatcgtca actgaagaaa 4441 catgtacttc ctgtaggatt aagtggtcat gttttccccc ccaggctgtg caacgatggc 4501 atgtccaacg tcaatgtctg taagtatctg cattgctttc ctcatgaagc cggggcagac 4561 cacgtctgtc tggaggtaga tcttcctgtg gacagcgggt acgtaacctg tgcttctctc 4621 ccagccgtgg taggcaggac caccatcacc ggaggcagag gaggcatggg aggaggattc 4681 ggaggcggca gcggcatggg aggaggattc ggaggcggca gcggcatggg aggaggattc 4741 ggaggcggca gcagcatggg aggaggaatg ggaggaggcg tgtgtggagg aggaggaagc 4801 tttgggggag gaagcatggg cagcagcggt ggaatgggag gaggatcgta cggcggcggc 4861 ttctcttctg gaagtgggag gatctgcagc tctggaggtg gcttcagctc cgggggggga 4921 tcatcctctg tacggagatg tgtcacaacc acctctgtca aatcttcggg agtgagattc 4981 tgagccccaa gcccaggttg aaacaagaaa //