LOCUS BMBB01000001 5000 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_1. ACCESSION BMBB01000001 BMBB01000000 VERSION BMBB01000001.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5000) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5000 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_1" assembly_gap 2873..2966 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4069..4349 /estimated_length=281 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4600..4843 /estimated_length=244 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 751 a 1314 c 1431 g 885 t ORIGIN 1 ggggaccttt ggggacactt ggggacactt ggggacaggg atatttgggg acaatgggga 61 tgtttgggga cacttgggga catttgggga ctcttgggga catctgggga tggggatatt 121 tggggacact tggggacctt tggggacact tggggacact tggggacagg gatatttggg 181 gacaatgggg atgtttgggg acacttgggg actcttgggg acatctgggg atggggacac 241 ttggggacac ttggggacag ggatatttgg ggacaatggg gatgtttggg gacacttggg 301 gacacttggg gactcttggg gacatctggg gatggggata tttggggaca cttggggaca 361 cttggggaca gggatatttg gggacaatgg ggatgtttgg ggacacttgg ggacattggg 421 gacatctggg gacgtttgta gacatctgag gacacttggg gatggggata tttggggaca 481 cgggggatgt ttggggacat ctggggacag ttggagacat ctggggacac ttggggacat 541 ctggggacat ctggggacac ttggggatat gtggggacct ttggggatgt ttggggacct 601 ttggggacct tttggaacac ttggggacat ttggggacag ttggggacag ggacatttgg 661 ggacatgtgg ggatgtttgg ggacagggat atttggggac atctggggac atttggggac 721 atttgggatg tttgggaaca tctgggaacc tttggggaca tttggggact tctggggatg 781 tttagggact tttggggaca agggacaatg ggacttttgg ggacaggggg agaaggacga 841 ggagcttttg gggacagggg actgggacaa gggacaactg gggaccaggg acaaggggcc 901 cttggggaca gggagaacaa gggacatttg gggacggggc tttggggaca aggggacctt 961 ggtcaccggg gttctgaggg atggggacac ccagatgctt ggggacaccg ggtggggaca 1021 gggggacgct ggggtttggg gacaccagga catggggacg aggggagacc agggtttggg 1081 gacatgggga caccggggca tggggacacc ggggtttggg gacacgggga caacagggta 1141 tggggacact ggggcatggg gatgagggga catggggaca ccgggatttg gggacaaggg 1201 gacaccaggg ttaggggaca cggggacacg ggggtatggg gacactgggg catggggacg 1261 aggggacact ggggtttagg gacggggggg acattggggt ttggggacat ggggacaccg 1321 aggcttgggg acatggggac acggggattt ggggacgttt ggggccactt ggccggggat 1381 attaggggcc atatggggac aaggggacac gggggtttgg ggacacgggg cctcggggcc 1441 gttggggaca tcggggagcc gcgtgtgacg cggctgtccc cagtcggcgg gggacctgga 1501 gaacgacgag cgcacggcca ccgtgctggc ggggctggtg gccaccgcct gcgggctgcg 1561 gctgccccgc ggccaccagc cgcccttccg ccgcctctcg ggtgagtgac agccctgtcc 1621 ccaagggggt ggcactgcca ccgctgtccc cggggggggg ggggggcggg gtgacgctgc 1681 caccagtggc cccaaaatgg aggcggcccc gtgttcgtct tgtccccaag ggggtggcag 1741 tgccaccggt gtccccaaga tgggggtggc cccgtatttg tcttgtcccc aagggggtgg 1801 cactgccacc ggtgtccccg agatgggggt ggccccgtgt ttgtcctgtc cccatagtgg 1861 cactgccgcc gctgtcccca aaatggaggt ggccccatat ttctcttgtc cccaaggggg 1921 tggcactgcc accgctgtcc ccgtgtttgt cctgtcccca aggtggcact gccaccgctg 1981 tccccagggg ggtggcactg ccaccagtgt ccccaaaatg gaggtggccc cgtatttctc 2041 ttgtccccaa gggagtggca ctgccaccgg tgtccccagg gtggcagtga ccctgtattc 2101 atcttgtccc caaggtggca gtgccaccag tgtcaccagg gtggtggccc tatactcgcc 2161 ctgtccctat agtgggagtg tcgccggtgt ccccaagacg gtggtggcac tgccaccagt 2221 gtccccaggg tggtggtccc gtgatcatcc tgtccccaca gtgccagtgc caccggtgtc 2281 cccaaggaga ttatgggggc cctgctgtcc ccctgtccct gctgtcccca tggtggcagt 2341 gccaccagtg tccccagggt gatgtcagtg tcccttttgt ccccctgttc ctgtagtggc 2401 agtgccaccg gtgtccccag ggtggccgtg gtgtccctgc tctccctgct gtccccatgg 2461 tggcactgcc accgctgtcc ccaaggagat ggcagtgtcc atgctgtccc cctgtcccta 2521 tagtggcacg gccaccggtg tccccagggt ggtggcactg ccaccggtgt ccccaggaca 2581 gcaccggtgt tccctgctct cccccctgtc cccgtgcccc cggtgtcccc ggggcggtgg 2641 cggtgtcccc gcacccgtcc tgtccccgtg cccccggtgt ccccggcggg gggggggggt 2701 ggggggtggg tggcagtgcc cccggtgtcc ccaacgtccc cgatgtcccc gcagtggtgt 2761 tcggggacca ctcgctgctc gtcaccgcct cggcccagaa gcttttcgtg gtgaagcgcc 2821 agaaccgcgc ccaggagccc gccaccgcct gagccgccgt gtccccaagg ccnnnnnnnn 2881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2941 nnnnnnnnnn nnnnnnnnnn nnnnnngggg cgttttgggg acggcgggct cggccccttc 3001 ccgggtgaca ccgctgtccc cacgtcaccg tcacggtgtc actgtcaccg tcaccatgtc 3061 acggtcacaa tcccagtgcc gttgtcacca tcccagtatc ctcatcacga tcccagtgtt 3121 agtgtcaccg tcacagtgcc atcgtcactg tcacagtgtc cttgtcacca ccacgatggc 3181 accgtcacaa tgtcactgtc attgtcacca ccatgatgtc cttgtcacca tcaaaatgtc 3241 actgtcacca ccccagtgcc acagtcacca tcccagtatt cttgtcacca ccccagtgtc 3301 actgtcacca tcacaatgtc attgtcacca tcccagtacc cttgtcacca tcccagtatc 3361 cttgtcacca ccacattgtc accgtcccag tacccttgtc acaatcccag tgtccttgtc 3421 accatcccag tgtcattttc acccagtgtc cttgtcacca ccacgaggtc cttgtcatca 3481 tcccagtgtc actgtcacca ccccagtgtc accatcccag tgccattgtc accatcccag 3541 tatccttgtc accaccccag tgtcaccatc ccagtgtgct tgtcaccatc ccagtgtcct 3601 tgtcaccacc ccagtgacat tgtcaccacc ccagtgccac tgtcaccgtc acaatgtcat 3661 tgtcaccacc attgtcacca tcccagtggg cttgtcacca tcccagtgtc cttgtcacca 3721 ccccagtgcc actgtcacca ccccagtgcc attgtcaccg tcacaatgtc attgtcacca 3781 ccactgtcac catcccagtg tccttgtcac caccccagtg ccattgtcac caccccagtg 3841 ccactgtcac catgtcattg tcaccaccat tgtcaccatc ccagtgtcct tgtcaccacc 3901 ccagtgccat tgtcaccacc ccagtgccat tgtcaccatc acaatgtcat tgtcaccatc 3961 ccagtatcac tgtcaccacc attgtcacca tcccagtgtc cttgtcacca tcccaatgtc 4021 attttcaccc agtgtccttg tcaccacccc agtgccattg tcaccatcnn nnnnnnnnnn 4081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4141 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt ccccaaaatc gttgtgtgcc ctcccccccc 4381 agatttgggg acccctttgt cccccaggct tgggggacaa ccccctttgt ccccccccct 4441 ccccgtggca cgtggcagcg aagcagcagg ctcagccccg cccccccccc ccctaaaaac 4501 cggggtcccc gcgcgccccc ccggccccaa atccaccccc ccagccgttt ttgggggtgt 4561 cggggggggg gtgacacgcg tgtccccgac gtccccgtcn nnnnnnnnnn nnnnnnnnnn 4621 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4681 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngtcaccc cgaaacggcc 4861 ccaaaagggg ggctgtgggc acaaaaaggg tccccagggg gctgcggccc caaagcagcc 4921 ccaaaaaggg gggggggctg aggccccaaa aagggggggc tgaggcccca aagcggcccc 4981 aaaaggggta cccaaagggc // LOCUS BMBB01000002 5002 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_2. ACCESSION BMBB01000002 BMBB01000000 VERSION BMBB01000002.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5002) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5002 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_2" BASE COUNT 1399 a 1165 c 992 g 1446 t ORIGIN 1 tttttttttt tttttttttt tacctacaaa cgttctttgt gaaggcaaac caaagtatga 61 gaagaggaaa tgaagaaata tgcaatattc aataatttgg tgaatagtag acaggtgtgg 121 cacatctgtt tccttacaaa atggtatttc tgcacgaatg agtagacgtt actgcataac 181 agaagtgaag gaataagtta caagctaaat tgtgaagggt aatgagttct cagtgcaatc 241 aaaaactttg gctccaccat atacatcaga ctgcagaaat gaaagagcag tgaacacaag 301 tattgttctc tcgcctgtgg atggaattct gtctccacat ttcttgggat cttttttggc 361 tgaagtacca caggtaatat aataaatata ataaaaagcc agccttccta tcatgagaca 421 cttgcttccc ttaagcagca ggtggatgta tgatgagccc agtgaatatc tgtaatacat 481 accttcacct cctcttcata ctggaatctt ctcttgctga caatgatgtc ttcaattccc 541 cttctatctc caaacttctt ctcaaagatg gtgtaatttt tgaagagatt ttgagcgtcc 601 tgttttggaa ttctatccaa ggcgtatttg tagatcaccc ttactctttc aaactgaaaa 661 cattaaacat cacttgaatt gtatttagaa tgcaactctt ctcctacccc acaatgtgtg 721 ttttagtttg tcaatgacct tttagtggta tttgatgtaa acgattgttt cagtacagga 781 ctaacacaaa tctccctgag aagtaagact tgaagggaaa aaaacaaatc tataaatacc 841 aaaatctatc atcacttagt catttacagg tttggaatat ttaaaatatt tttaagggtc 901 tgtggcttgg ggttcagaga atgttttgaa ttgctaaata gcctgggcac ttcaacaaga 961 gcatctggga agtacatggc taatctaatt cttcttttta tcaagcagtc agttgatgta 1021 aagtgtcaaa cttacaaatc tgaggacatg tattggattt aaaggcgcca ttttcagttt 1081 tggtagattt tgtgcttact ttcttagaat atatttactc gatgtcacca aaaggcaaat 1141 agaagctagg caaaaaaatg attccttaac tcagactaca gtaagacctc aaaggttttg 1201 gaaaaaaaca gaagtattga aatgatcgtt aagcagcctg gagtttgata ttcaaaaaga 1261 aatcttgtgg ggatagttag tatcagcctg atgtatggaa gtcttacttc tttctggttc 1321 tcctcaaatt ttgcaaaagc cacatacaag tgctcatcca tatggtcttc tccaaagaac 1381 tccactgccc tctcatatac tttccttgcg tgagcaaaat aacagtgctt ctcttcaaag 1441 cgagcatact tgatccagtt cttcacatca gggtgaacaa taacaagtag agctatgtta 1501 aagaaacagt agcacttgaa ttggacatct caaattgcat tcttcccagt gagctcacgg 1561 actatatgaa acaactccca tggatgatat atacaaggga cacaactggg aagaattcaa 1621 aacagctctg agcatgcaaa ggcttcatgt tcagtactga gaacgtgaat ttaaaaaaag 1681 gaatagaagt cagacaaggg tcaggaaaaa ggttaacgag gagaaaactg aaataaatga 1741 tgactgcaaa aaagccagaa gtatgagtgc tcttacatat tcactgctgt ggcaggatat 1801 gtccattcac ttaactgaat ttggaggcat atactaagca tgtatgtaat accaactgct 1861 ggatctcagc atggtgtttt actccagcac accccagtaa aaaggagcct aggacatacc 1921 tagagacaga atagacaagc aagaaatgaa gaagtctaaa cttgggtagc agtgaccctg 1981 cactaaaaag gatatatctc tcatagatgg tacgtgccct atccacctcc ttgtatctca 2041 gctcgaagtt aatataggaa tgccaggctt gctcctctgg ttgccactcc atccaacgtt 2101 caaacacctg acgagatcca gcaacattcc ccaacatctc ttccatgtaa gtatatttat 2161 accttggaaa acaagatcaa gtgtttacga tcactttgta agtacataaa tttcaatcat 2221 ttttcaagtg cttaataaaa acatcactga gacttctaca cctattcccc acttgcactc 2281 cagaaacacc tgtagtattg tgatgggcag catgcagaca catgaatatc cttctctcca 2341 atactcttac catttgaaaa gtatacaact attccaaaat taagccttta cctcttttgg 2401 ggctagcctg aagaactgca gaaagagaag aaaatgtact tttgcatgat gccaaaataa 2461 aaaatgatgt ctttgggggt aaaagaaatg ctccattctc tgttaacata ccagaactgg 2521 ttcaccctag ggagggtggt aatggctcga tcccaaatgt ttcgggcatg attaacctgg 2581 cggttcttca tttccatttc tgcatatttc agccagagtg tgacgtttct gtagtctaca 2641 tctaaagcac gctcgtaaat ggaacgggct ctggaaagca aagagaagtt aagttgcgca 2701 tttaacatgc ctctaagact gagagggttt atcaatgtgt cttaagaggt ttaagagatc 2761 tacagctata tcataattac ctctgtattt ctttcaggct ttcctcccat tgtgcgtact 2821 ttatccagtt actgataaca gttctgtttt ttcttatgtt atcttcaaaa gtctgagaag 2881 aaaattattt ccgtaagtaa aaaaaattct tctgtgcaga ccaatctttt tacgaatggc 2941 ttacgcatta ttattactgg aatgaactct aaatgtcttg catagaatca cagaatggtt 3001 tgagttggaa gagacctaaa agatatctat ttccaacccc tcaccatggg cagggacacc 3061 ttccatcaga ccaggggctt ccaaagcccc gtccaacctg gccttaaaca cttccaggga 3121 cagagcatcc acagcttctc tgggcatcct gttccagtgc ctcaccactc tcacagtaaa 3181 gaatttcttc tgaatatcta atttgaatcc actttctaaa tttaaagaca ttaatctttg 3241 tcctatcttt gcactccctg acagagagtc cctccccagc tctcctgcag ccccctttag 3301 gcactggcag gccgctgtaa ggtctgcctg gagccttctc ctctccaggc tgaacaaccc 3361 caactccctc agcctggctt cgtaacagag gtgctccagc cccttgatca tctttgtgcc 3421 ctcctctgga ctcattctaa tacttccatg tccttcttgt gctggggccc cagagctgaa 3481 cacaggctcc aggtggggtc tcacgagagc agagcagagg gggacaatcc cctccctcac 3541 cctgctgcca tgctgctttt ggtacaggcc aaggtatagg tgcctttctg agctgcaagc 3601 acacattgct ggctcatgtt gggcttctca tcaaccagca ccccccaggt ccttctcctc 3661 agggctgctc tcaatccatt ctccgcccag cctgtatttg tgcttgcaac ttcccaagcc 3721 caggtgcagg accttgcact tggccttgtt gaacctcacg aggttcacac aggcccacct 3781 ctcaagcctg tatgggtccc tctgaatggc atcccttccc tctagtgtgc caactgcacc 3841 acacagcttg atgtcatcag caaacttgct gagggtgcac tcaatttcac tgtccacgtc 3901 acccacaaag atgttaaaca gtgtcagtcc ccagtgctct tcccctctcc actgatgttg 3961 taaccccatt gtagaaggcc accagatttg tcaagcacaa tctgccctta gtgaagccat 4021 gttggctgtc accaatcacc tccttatttt ccaggtgcct tagcagagtt tccaggagga 4081 tctgccccac gatcttgcca ggcacagagg tgagactgac tggcctgtag ttccctgggt 4141 cttcctcttt ttccttttta aaaatggggg gttatgtttc tcctcttcca gtcagtggca 4201 acttcaccag atggccacag cttctcaagt atgatggaca gtggcttagc aactacatct 4261 cccagttccc tcaggaccca cgagggatat gacgatatat atcatcaggt ccagcagact 4321 tatgcacctt caggttcctt agactgtctt gaacctgatc tcctactctg tgtggttctt 4381 tatgggtgac ccgttcggtg acaaactgga gctgattgat acggcggtgc attaagggtt 4441 aagaagaagg ttactcaggg gcatagagtg gtaaccaggc tagaataaga ggaagtggga 4501 accaataagt tgttgttgtt aggctcggac atgcctatag agggctacgc gtgatcaaca 4561 ggaatgcacc aatcagaagt ctgtaactac gcacgctagc cgcgtgcggc acgtgtagct 4621 ggctcagaaa gctatataat atctggcatt ggaacaataa agggtctcca tttctcgaca 4681 atcttggagt ccatgtcttc attcccttca gttcttcatt cttccagtcc ctgcctttgc 4741 ctgctggggc ccagtccatg tggctggagc tcttgtcagt gaagactgag gcaaaaaagt 4801 cctcgagtac ctcacccttt acctttatcc tgggtgacca cgtctcccat ttccttctgg 4861 agagagccca aagtttccct agtcttctgt ttatcactga tgtacctaca gaaccctttc 4921 ttgttgcccc tgatgtccgt ggccaaattt atttctaaca ggactttggc tttcctaact 4981 taatccctgg ctgctcagac aa // LOCUS BMBB01000003 5004 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_3. ACCESSION BMBB01000003 BMBB01000000 VERSION BMBB01000003.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5004) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5004 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_3" BASE COUNT 1035 a 1527 c 1769 g 673 t ORIGIN 1 cagggcctga atgcagagct cagagccccg accccccccc gctgcaccca gctcgggcca 61 ggaagacaaa accctcgcac accgcgaatc cctcgccgcc accgtggcat ccgcgccggg 121 gctgcccggt cggcacggcc gctccccggg gagcgagggg ccgcagcgca cgcccttcgc 181 cgcgccgtgc caaggggaac cgagggcacg cggccagctc ggctctgccc gcgccctggc 241 cacgctgcaa cgactcccac aagctagaaa aagccgccgg gtcaaggctg gagggctcag 301 actacagctc ccagcatcct tccccagcca gcccggcctc ggggagaaag aaggcaacaa 361 acggagcaat tccccgctca ctcgaagatg cacgggtcag gctttgtttc tccaggctcc 421 ctgcacaagc gtgcgtgcgg ctgcggcgct gggcacgctt tgggctcctc gaggaagcgg 481 cgggggagaa ggggagagcg gagctgccgg gaagggtgaa ttatcgccgg gcgcctcggt 541 gcgcaggagg aggacggcta atttattgtg cacagccccg gccaagttca aggtgatgtc 601 gcggaggctg gcgcagcagc aagggcctca tcctgcccgc accagcggcc tgcgtcctcc 661 tgtcctgctc gtggctgggt tcataaattg ctcttaaaaa gggatctatt tttaccgtcc 721 ggggatttaa aattagagag ggcagaagcg gcgaggtccc gggcacggct ggggcgggca 781 cggcacggcg ggtgcctcgc ggggaaagcc aggctctccc gaaggttgca tttaaagaac 841 ggcctcattg tttttcccaa acaatgctca gcagatggga gaattgaaag tgtgttgcaa 901 ccttccctct ctcccagcgc cgttcccggc gagctgctcc tatgctttgg cagccgatct 961 gagctcccgg ctggaaacca gtttgccgga gctactggca gaggggcgag cccccggcac 1021 cagctgcacc gcgctcccct ctcaccgagc aatcccaaaa agcccaagca gggccaggca 1081 cggggccacc acctgccctt ggaaggtttt ccaagggact tttagggaag gccccggtgc 1141 gaggtgcccg ggggggctgg ctccccgcgg tggccacgtg cccaagcagg tggcagcggc 1201 cgggcaccgt gcagggtccc ccccgtgcta tggggaccgg gagcggcgac ggtgctgcgg 1261 ccacacgggg cggcgggtga aaccacgagg aaaagccacg gccacgtggt cacgacgcct 1321 ctcacggtga ggcaccacgg ggcacccacg tccccggtcc cgagggtggc acccatcggg 1381 gtttgtgctg ctggggggtg caggcccacg gcccttgtcc cgctccccgt gccaaaatgg 1441 ggctgtgagg atgcatctgt gcaaaacgtg gcgctggggc ccggcacagg ggagaggggc 1501 tcaggcagag cgcggcgggg ggaggctgaa caagcccccg cactgcgccg cggcaccctg 1561 ctcccaccgc tgccccgggg ctgatgtccc caccttgctc ctgtgctcgg ggtgctgggg 1621 gggggtcagg ctcaggccgg gggggcagcc gcagggtgat gcagacgggc tggaggaaag 1681 cacgaggcga ggaaacgagc gggagcatcg cagcggccgt cagacctgca aatctccccg 1741 agcacttggg taaatccctc cccatgcagg gatcgcccca acggctcggc cgggagcccc 1801 acggggggca cggggacggc ggcgggtccg cagtgccggg gctattttgg ggtgccaaca 1861 gccagacccc tccccggggg cagggagagg ccctcgcacg cggagccctt ggccgtgatg 1921 ccggtgccgc ttccctgcta atctgggcag ctccgtcttg gtttcctgcc cggtccctga 1981 gaggggacag aggtgagctg ggggatgggg aggaagtccc gcagcgggga cagacagctg 2041 agcgggcacc gtgtcaccct cctcgccgcg ggacgctcgc ccgcggcccc agccaggagc 2101 acgtcgcagc cgctgccctt gccaaggctc attctggcct cgtcgggccg cgaagccggc 2161 gctcgggccg gccgtggccg ggctcggagc tgcccaagct gggctgcgag cggccaccaa 2221 gggcctgggg ggctcgaggg attcggggag ctgcggcgat gtcggagggg agatgcgcga 2281 agccagaggc agggcgggtc ccgcgcacgt tccaatgtat ccacatcacc atccgctgct 2341 ccccgagccc gggagagcct ccccgccgag cgagtgggat gggaatggct tggctctggc 2401 acggcggggc cggggggggc ggcgggggcc ggatccggta ggtgcagacg acgtctgatc 2461 ccatctgggc tggattcaag cggaggctac gctagggcag aggggagctg cagcctcccc 2521 gaggcgaagg cggcggggca gggggttgga aacgtggccc ccccttcccc aatccgctgg 2581 gaacggcgcc gtgctgcgag cgggaggctc ccggagcccc gaccgtgcca ttcccacctc 2641 ggccccgcgc gcttcgctgg caaaaacggg ctctgccgag cgggtgggaa cggcaggggg 2701 gcggccggag ccctggaaaa caccaagacg ggtgtggggg ggggagaaga aagagagaaa 2761 agatgagaga gaaaggggtg aggaaaggaa agagagagga gagaggagga aagagggaga 2821 ggagggggaa aaaaagagaa aggagaaagg aaaagagaaa ggagataaca gaaaagagag 2881 ggaaaagaga aaggaaaaaa aaaagaaaag aaaaagaaga gaaaagaaga aaatacaaaa 2941 taaaataata acaataataa agaataggag aaagaacaag aaagaaaggg ggggaaaaaa 3001 aaagggaaaa aaaaaaaaga ataagaaaac tgaaaagaaa gacgacgggt cgaggtgctg 3061 cccttgccaa gccaagccca cagctgggag caccagcacc ggggtcaccc gctcagcacc 3121 agctctgccc acccgcgccg tgcccgtgcc agcccctggc cgtggcagcc cccggctgcc 3181 ccgactcccc ccgcggcacg tgcggcgccg gcgatgccca gccttgggca gggtgcaggg 3241 ttcagcaggg gggggacaca tacacactac aaaccccatc ccctgtgtcc cccccccccg 3301 ctgccaatgc cccaaggtgg ggccggatcc tgcccatgcc cagcgcgggg atgagatctg 3361 caaggagggg ctgcgctccg cgtggcgagc ccatggcgca ggcatggggg ggggggggta 3421 ggaggtggtg aggggggggg gggctggcac cagcaacacc cccctcccct caaaaaataa 3481 taaataaata aataaaaaac gccagagccc tcggagggca cggcggcggg gcggggaggg 3541 cagcacgagg ccggaccctg cgcacgggcg gctgccagca gggaagaggt tacgcggcgg 3601 gggccggctg cctgctcgat aatcaaataa atatcagtga tcgataaggg acagagcaca 3661 ggcagaagcg cggccgtgaa cgccccagcc ccgtgcgatt tcggggagcc cctcgctcgc 3721 cgcaaggccc ccgcggcggc caccccccgt gcgccaccgg gccacgtcgg cgtcgcccgc 3781 ggtgccaccg ccgtccccat gtgcggcggg gtcagcgctg cccctcgagg gccccgcgag 3841 cacgtggggg tggccccggg ttgggatggg gagcgggggg gcagcggtgg tgtggggggg 3901 cccccatatc ccgccctgcg cggccccgct gccctcgtgc ccgcgagcgg gtgcacggca 3961 cggcccgctt gcgggttgtc ccaaatttgg agggttttgg agaaaacccc cgtgcccccc 4021 ccacctcggc ctttccttgt tgaccccccc ggcaccttcc ttgcacccca cgaacatgtg 4081 cagccgtgct tgggaggtgg gggggggagg cgagaaggaa aaagtttcac gctaccaaag 4141 aggcggcgcg ggcgacaccg agcccgcagc cccggacccc cccgccgcca ccctgaccga 4201 gccgccgacc tgccgcaccc caccgcgtcc cccccagacc cgaaactcag cggcttcccc 4261 acaccaccca cctccgggcg cagcgcaaca aaccacagcg cgaccttacc cccccctcga 4321 gccctaagtg aaagcagagg cagaaaaacc ccaaaagcac cagagacacc ccaaaaaaac 4381 cccaaaaaca ggcggcggga aggggggggg ggaagcaaga gtgaagcgca gctcctccga 4441 gcaccccgtg cagccccaac ccaccctttg gctgctagga ttatttttat gggggggggg 4501 gggggggggg ggggttgcta attttatttt ctttttgcgt ggcacctgga aaaagccttt 4561 tgcgctatgg ggttgggggg gggggggggg gggggggggg cgcggggccg gttacctggg 4621 tcaggcagag aggagacgaa tacatcccga gccgtgctgg gaaagtggct aattgcaggg 4681 ctgagactcg aggcgtaaaa gttactgagt catttcggag gctggagcag tccgggcgtt 4741 ttttctctct ctctcctccg gcgcggctct gcggggcccg ggggggggcg gccgggcagg 4801 ggggggcggc cccgcgggag ggggggccga ggaggaaata aaaagggtcc aacttccaaa 4861 aaaaaaacaa caaaaaaaaa acaaaaacaa aaacaaaata aaaagatcaa ataaaaagca 4921 aaaatgtttt ccccctcgaa aataaagcgc tttttttttt ttttttgggg gggggttgat 4981 ttagcttttt tttttttttt tttt // LOCUS BMBB01000004 5004 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_4. ACCESSION BMBB01000004 BMBB01000000 VERSION BMBB01000004.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5004) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5004 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_4" assembly_gap 740..854 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1493..1550 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1799..1931 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3036..3202 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3579..3718 /estimated_length=140 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4707..4853 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1225 a 800 c 871 g 1348 t ORIGIN 1 agttttattc ttggattaaa tgatgggaaa aacaagctct agaacagact atacaaagct 61 tgctacttct gccaaaaatc agaccaacat cagtgttaga tagatgcttt gctgtgaaaa 121 ggaagtggaa aaataatttt acggcatagg aaggtgaata tgaaaacctt cctcttatcc 181 cttgaaaagt cattgcattt actcaattct atgacaaagg ttattatata aatgcatgtg 241 tgtatatgta tttttttgtg aattgtcatg tactgttgac atgcttgatg ggaggggaga 301 gtgaaaacat cactgaaact taagcttgtg tcatttaaag atgtttgctg agaggcaaaa 361 attccttaag ggagtcccag ccaagtcctg ttctagatgt gccttgcagt gcacatgcga 421 aggtactaat ttcttttctg tcagagcacc acattctaca tccctaacaa gagtgaatat 481 gaatctgaga attctatcga ttctgttcca acttttcctg aactggccta aaactggagt 541 aatttaaatg gtcttgcacg cggcagagat ggtgaagatc gctgaaggtg acatatacca 601 attcttgttt tggcttagtg ttttccacag acttaatggg ttatagtttt cttacttctg 661 catttttttt gaaagtgact caatttattg tatatgatag tataatcagc tagttatcta 721 ctcactggaa gctctagatn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 841 nnnnnnnnnn nnnnaaaaaa aaaaaagaaa agaaaaaaca caaaaaaaga aatcaatgct 901 acagcctttc cttatacata gaattgttca cttccaataa aagaattggt gatattaata 961 tggggaaaat ctatgtattt cagcttgtat tttctgagag ctgctttgtg tggagaatat 1021 tatgttttcc gaagtagaag agcctgaatg aaaccaaagt agaagagcct attatgcctg 1081 aaattgacag gcataattgg tctatgtgct agagctagag atgtcttacc tgactcctac 1141 tggttgaaaa aaaatgttct gctgttgatg acttgggtga attactgctt tgctgttttt 1201 ctgttctgct tgctctgtga gccctcttga catttggatg tcaaggccta gcatgctgag 1261 cctttggtca ctcaactgtg gaccatagct cataggtcag taagtataca tacaaactaa 1321 atacaaataa tacctccctt attgctagag cataccctca agaggtccaa ttctgtctct 1381 acatgaggca ggctctcctt atggaagacc ttgaattcac ctagatagaa gacaggtgaa 1441 ttagttgtac ctggctttag aagtttagtc aagaagagaa cagattttta gannnnnnnn 1501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn tctgtatgag 1561 ggtgcctttt gcccctctac taactgaatc accctagaat agtattcatt tttcaccttg 1621 tattgtaatg gaagtttaga tgagtttata ctaagagcat taacttctag atcattgcag 1681 acagactgca gaaatccctc agctgaaagt ttaacagaca aaaagtgtgt gtcacggaga 1741 ctgctcccag tcacagttgg gaagtcctga caagagtatc ataaactggc agggacaann 1801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1861 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1921 nnnnnnnnnn ngtcccccta ccactaatat tactgaccta tatctgctta gcagctcttg 1981 ctgacagaac aaaaacatcc tttcttatat ttagaggcat ataaaaacct gagaaaagct 2041 tatgtgactc tgataacaaa atatgtacta tttaggaaga atttcatagt taaaattgac 2101 tagttagatt atagtcatca gtgcaaagag atgttctccc catttcaaac agcttcacta 2161 gtcaacttgt ctgataatct taatgtagca aataatggct taattcccag ctatgatttt 2221 gttttgatac tgacatgcct tttgtttctg aagctataat atgcttgagt ttgtagtcag 2281 actgactttg tattcttctg gaacatcccc accaacctgt tgtagttggc ctgaactgac 2341 taaaagagtt gaacagattc caaacttccc tgccacttct gcaaagctgc tctgctggaa 2401 gctctgagct atctctgagt ctcaggcttc tgtactgaga cttcagtacc gattctcgct 2461 gtttctgaag gttttttctg catttaaata tttttactta atatttagac aggacaggtc 2521 atcatgaggc ctttcctata gatatactaa caattatttt gcctatgtta ttctgtcatc 2581 atgaggttaa tgcctgactg gaaactttgc tgcagccaca ctaatgtaga aattcagtgc 2641 tttcagcaac ataacttcaa gctacaatac ctgttgttgt tttttttaac ttgttttggc 2701 tgatgggcaa acttttgttt gtttgcaaaa tgttgtcaat ttttcactga tgaaagtaga 2761 agctctcatc agactttctt tagtttgcgg tgagtgaaaa cttcaaaagg tgtttaaaaa 2821 aaaaagaaac aaaaaccaat tattgaagct cctgtagaac ctcattgcca actgcacatt 2881 ccagtctgct tcaagcaaga aggaggtttc gttcacctca ctgctagtat taaacaggct 2941 gccataaatg caataaggaa ttgcagaaaa cattgcgaag aagagaaatt aatcagagaa 3001 tatgctttgg gtaccacagc aatcattgca gtcttnnnnn nnnnnnnnnn nnnnnnnnnn 3061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3181 nnnnnnnnnn nnnnnnnnnn nncttcactg ctcccttctg ctcccttctc ccctcctggt 3241 gaaggaaggt agcaatgtaa gctactgtgt tactaaccgt aagaaaacgg cagtaacaaa 3301 gctgttagtt cactaaaaga gcattctctg gttgacatag gtagttcttc agttgtgttg 3361 tattgctgta gggtaaagct cctgatggca cagttcatga agacctgtga aattttgttc 3421 ctcagttttg caaggtattt catggcttaa gtaccagaat attcaaacgt acagacacag 3481 taaattcttc tctagttcac tgaggcaggg gagaaattat cataaaagct tccagctgtg 3541 tagaactgtg aatcaggcaa tgatcagagg atcaaggtnn nnnnnnnnnn nnnnnnnnnn 3601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnntt 3721 caactgaaga caatgacttg acatactcag aagaaaaaac agaaacaaaa gtcaaaattt 3781 ggttgaagcg agtgtggact gcttgttgtg taaccgtttg tgtccttgag ggtgcgagga 3841 ggtgatagct gtgtatcttt ctgctgcagg atttctacgg gggctctgag ttgcatggtt 3901 ctcccttgca gactatccac ataaaaataa ccagacctta ataatgcttt tttttccttc 3961 agtttaagta agatcattca atttaaccta attccttttt acgtagcact gacttttaaa 4021 aaagtgtttg ttaaatagtt tggattaagg caaatgtatg atggagtccc ttaagatgga 4081 gtctcctact aaataattat ggagtatgca ggggctttgt gctaattacc tggctggaga 4141 tgcagcagtt ggactggctg agttgctaca accatggaaa gggctggctg caagaagcac 4201 agctggcagt catgtctcct gtcacagatg tgttcttgct tgagcccagc gtaagaggct 4261 ggtatccttt cctccctcta gacttctata ctcttctgca tgttctgttg cagtatctag 4321 acccccactc catgtagctg gcaagacagc ctctctctat aagcatgtga atattactac 4381 tcttgttact ctcacagaag tagctggcaa gcctgttgcc caccttacat ttgggttaag 4441 ctgctgctta aaatgccctt gtgcttaaca ggctgggatg atgctgcaca tgtctggaaa 4501 agccctgcta ttcttgaact ggtgcaacat atgtcttggt gctgggcttg gatctggctt 4561 cagtgctctg agctcaggag gaatccagga tctctgtact ttaagtggct ttgtctcttg 4621 tttcagcgtg aggaagctgt gttgttaagg tcagcgtgtc cttgacggtt gctttaaata 4681 cttctgcgtt aactgagata agatgcnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntgctttg 4861 taaaggacat ctgctttctt gagtgaaaaa tatcttgttt attgatgcgt tgcttaattt 4921 tgatctctca aaccaaaatt tgtatactag tgaaactgcc cacagatcta tatgctgctt 4981 ctgcaggcaa aggagctttg gtta // LOCUS BMBB01000005 5004 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_5. ACCESSION BMBB01000005 BMBB01000000 VERSION BMBB01000005.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5004) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5004 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_5" assembly_gap 166..260 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2591..2634 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2812..2869 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3198..3299 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3532..3757 /estimated_length=226 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3998..4121 /estimated_length=124 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4370..4511 /estimated_length=142 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1385 a 747 c 814 g 1267 t ORIGIN 1 ctgcagaacc tttattgtca gtgtttaggc tgcaaactct gacagagatt aggctttgca 61 ctttggttat ggctactgtt aaacacctta actccatgtg cagatagtga aaaaaatata 121 aaaacacatg catttcaaca tagaccatta ctgaaaaaaa aaaaannnnn nnnnnnnnnn 181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 241 nnnnnnnnnn nnnnnnnnnn tttttttatc attaccacat tcattgttta catttaactc 301 atctgtttct gatgtcatgt aaccagctca gccacaaaac ctggctaaaa tgttgggaaa 361 tgtttttgac aagaatattc tttagccagg aggactagcc atcctgttat taggctagag 421 agatggcttt aaacaactgc tgccaaggag tgaatatgga acatgcagtg ttgggttatt 481 atcgtaaaga catgaattac catttccttc tcagaagatc gtctttcatg ggtaggttct 541 gatttaacat gagggtctac atgggttcaa tcccacatga atttacatta tcagtaggtt 601 cctttactct cactggcaaa gtacaagctt aaaaagactg agtctagaga tggaggtcat 661 ctgtctttgt cttgagatta tggggaattt agagcttatg taaaatactt ctcaccccaa 721 atttctttga gggattttca tcaaaaatgc acacaaaatg atgtttaaat aaggagaggt 781 gaaaattctc agatatttct gattttcaca gttcagggct ggtcaactag atgacctctt 841 aatttacaga ctcccttttc tgcattcaaa tccaacaccc tcaggaatga agccctagcc 901 ttcattgaga cttggtgttt ttgtacctcc agcaataaca gcaaccttca gtaaagtaat 961 tttgaggagg acaaaacttt ctcttggttt tccagagtaa gaaggagtct agtattgctg 1021 aaagagaaat ttccctccct gtgcattatg cagcaagtat aatagtaaag agaagtttta 1081 ctgatatgaa agtaaatgcc tggaaaacag agtggaatgg aacatctggg acctggaaag 1141 actctcaggt gactggcttg taaatgtcta ctgcagggtt agtagaaatt tatcctaggg 1201 tcattaaatg ggactctagc tctctgttga ctgtaataag agcttaaaca catgggccgt 1261 gtatggacca tataggaacc tttcattttc tgtcttgatc acaaacagaa tcttagcatt 1321 gcatacctca catggcaatg agactctgca gtgtgttcca tcaacaggtt gctgttacta 1381 aacatcatgt gagaacataa agattttctt tgactcccat tgtctcttat ttctcagaat 1441 cacagaatga agttagaagg gacctcatag gagggatgct acattccatt aatcatttta 1501 gtagcccttt gctgaactca ttccaggagc tccatgtctc tcttgtactg gggagaagat 1561 gttaatgttt tccatttcat tccagtagtg tgcctgctaa tctgaagtcc cctttatata 1621 cactcagttt aggtggctgc aggaaacaac ttgtaagttt taccttaaat gctggtaaat 1681 ctgccaaaat atcttagaac actaccagta ccaggaatgg atcctacagc aatgactaaa 1741 atgctataac aaataaagtt attcttctca cttgatcatg ttattgttat aattattacc 1801 gaactgttag ggaaaaataa tcagggataa ggatggacaa ttacagatgg tccctgcttt 1861 tattaaagtt acaacagcag tgagaaccac tcattataga cagaaaataa ggaatgtgct 1921 aatgaaacca gaaaatgatg agatgatatc aatctgtggg acaccagcaa tatattttct 1981 gaattttctt ttcttcctga atggtcatca tggtgaagta cagcttaaat aaaaataaga 2041 tttgagggta gataatcaag ctcctttgag taagctttca tagatccctt ccaaagacat 2101 gggacaacgc aatgaaataa ttcagtccat aaagagtggc tgagattgca ttttaggatt 2161 acaaacaggt tgggaattta ctctaggagc ctttgaaaga ggcagagaaa gaaactactg 2221 cctcttactc tcaggggata taaagaacag cgatgccaga acaggcttaa caagtgatag 2281 tcaaaatgac attcacaaga atgaggcaag atttcattcc tcaagtccac caacagaata 2341 cttgcaagga aaaagtgaag ggtgtaaatt aaattagggt gaataaatct gatcttcctt 2401 ttgatgtctt ctactatgga gtaggagaag ctgcaaatca aaagagatgg catgtaccca 2461 aagatgaccc tgaagaggtg caaggattgg taacaaaacg tgtgtggaac tcaataatgt 2521 cagattcaag ccccagtcac catcatatga gtaacacata ggctcagcac tgtgaaagaa 2581 gcttacactg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnntgctgc 2641 ttactctgta tctgttttta gacagagaaa ttcaatttcc acacttgtca atcccatatt 2701 gtcacctgct tctaaccaca tagacataaa tgtgatgtaa tagtttttgg aaaaatgtaa 2761 cataaacctg tcacaaggat ctttaatatc tctgattttt aacttttttt tnnnnnnnnn 2821 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt tttttttctt 2881 tttttcttaa tgcaataaat aaatactacg gaaaaaaatg taattaagag aaaaacttca 2941 ataagccttg ataacaagaa aaaatataca acatccctca aaatgtctct catttatata 3001 gtacatttat acagtaccca ggtacagaaa caaaacagag gataacaaca gcttaattct 3061 caattactgg tgcatatgtt ccatttctga gatgagctgt tcttcttagc tggtatgttt 3121 aagtgcatgg tatgacctca aagaggacag gggtttcttt taattaatcc agcaggtggg 3181 gaaaaaaaaa aaaaaaannn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnc 3301 ttgcagcaaa agagctttgc tacaacatga ttgctttttt ttttgtcact gttccaatca 3361 aaggccaatc ataattaaac aaattaattc aaatggggat tacagataat gagaactgaa 3421 tattttctac tctcaataaa tctgtatgca tggctaaaat acctgacata caacctcatt 3481 taaaaacatc aaaatttttg ctggggagtt gcttggaact cttttggcct cnnnnnnnnn 3541 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnntga tcttggaggt cttttccaac 3781 cctactcact ctatgacttt ttctagagac aaatgaccaa gacagtttgt tttaagaata 3841 tctatttcct tcccagccaa aatctgcatg gataacctga tagaagtaat attgttgatc 3901 aacatataat gtgtgctaaa agatactgac cacatccaca tgggtgtgat gcagtcaggt 3961 gtggctcaag gttacatcaa atgtaatcat gcatgtcnnn nnnnnnnnnn nnnnnnnnnn 4021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ngaatgatac gccaggataa 4141 ctggaagaat gcaacagttt gcaaattgca gtcaggtttt ccaagttcat catcttcttg 4201 aactatgatt ctaaacatac atttacttga aagttgtgca gcactggcct ggtgtcccca 4261 gtagtgtttg caccttgaaa gtaataagag gtgtttattt caagcagttt gtgagcaggt 4321 aatgagagtc tagggagcac aaaattcaat tacgtgaagt gtgttatgtn nnnnnnnnnn 4381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4441 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4501 nnnnnnnnnn natcaggcct tgtattgaat tctcagggcc actatgacat ttatttgtga 4561 gtgtaaagaa tctccgttat ttttgtgtgt gtgtctggtg taattgcttt acaggggtga 4621 tgcctgggtc ctttatggaa atatattagc actgcaatat gtcaggtcac tgagtgccct 4681 tgccatcact gaagtgaaag gatgagtctg catctcagag agtgagaatt ctccttccaa 4741 gcccatggtc acaactatca caaccttgtc agcctcacaa agacatctgt tggtgtgtag 4801 actgatatac accatttggc tctgtcaggc ccaaatcttg atcacatcct ttttagttaa 4861 catcaaagct aataattaat aataataata ataataataa taataataat aataataatg 4921 aaggagaaga agaaggagaa gaagaagaag gagaagaaga agaagaagaa gaaggaggag 4981 aagaagaaga agaaatccta gttt // LOCUS BMBB01000006 5005 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_6. ACCESSION BMBB01000006 BMBB01000000 VERSION BMBB01000006.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5005) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5005 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_6" BASE COUNT 1209 a 1298 c 1229 g 1269 t ORIGIN 1 aaggagtacc ccgaggtcag catgggggct agacatccag aaaggctttg ttgctagtcc 61 taattcacag tgggtgaaat gaatggtatg agactggaat ggtggatgga aattctcgga 121 aagggcagta ctgccacttc agcctcatac tggatgggtg gtggagacag cttctctctc 181 tacagtgtcc acaaatccct tgagtgatca tttttacagt cattgttctc taatgagtaa 241 atgccataac tcacggtaaa actcttcctt actaccatgg tgagattttt ctttctgtgg 301 cccaaactgt tttctaagac tacaaattaa tcttttcctc cacctatact gatttgtaac 361 ttttacaaat catgctcaca ttccccagtg agcattttct tctagactct tcagttatct 421 aacaaggctg tggtggggtt ccagagcatt accctgacgg gcacacgcta cataaaagca 481 gccaggagtg gaaaatactg cccaacagat tattctggga aatggaagaa aaataatctc 541 cagattctgg acacggttaa gagtttggca actgcatgag ctgatctgct cccaaatgtt 601 cagtaaagaa aatgcggaga gtagaaagcc cagatacgac acagaagttc cctgcaagcg 661 ttaactcttt aatatataca atagtggttt agaagcagtt aattcaaaag agtcatcaaa 721 gaaaatgatg aaatacatta aaagattcag actaaaatgt taaacacaaa atcctcaggc 781 tacaaagagg cctgcttttt ctggacagtc agcatctccc accaattatt cttcaaaatg 841 aacctacact ttgctggtac tcagaacatt aatatgataa tgttaaatga ctatgattgg 901 ctactgttag taccaatttc tctccaactc attttcagtc ttgtagcttg cctcgaaggc 961 tatctgaacg gagtgatgtt ctaatctccc acatcattaa cattttaaac caggctctta 1021 ggcatcattt taaaaagacc tcctctgccc ctcacttttt tttttttttt caaccacata 1081 cgctctccaa aaccagcatt tgaagccaca actgtgatcc tcccagtcca ttctgggacc 1141 cttctcatac ttcaattcca caaaagctgt tctcacacaa atctgttggg actaagtatc 1201 tttatctcat tcacactttc aacacttctt tctacagctg ttctttcata ttgcatggga 1261 atctgtgctg agttctgtat cctggtctct gcttcccagt aagcaaatta tttagtcatt 1321 ccccaacatt tcctgcttca cattagcaca aaaccaaaac tttcaaatac tttatgaaag 1381 ataaacaaca aaaccctact ccccccaaaa gatacgcatg tgtaccatac ccaccttcaa 1441 gaaagttcag aaaaagagat gctgtcacgt gagatacgca ggcacagacc catgctctgc 1501 gttctcctgt aactcatgtg aacgcagtga tgaagatgta atttcaggtc tctcggtctc 1561 tcttgcgagc tctgagcaca ggttgagcac cgtggtccta acctttcccc cccaatcctt 1621 cctacataga aatgaaaagg tgactcccac aggggattcc actttgtgtg agcagacacc 1681 cggagataaa ggacagacag acaaagacag acatgccagt ctcgctgaga gagccctgaa 1741 cactacgcag ctacacatct gccttgtcca gctctgccaa ttttcttttt gttttagtgc 1801 gtgcaagccg ctgccccggg gggacctgcc ggtgaccgaa ctcacgtttt cgtgcttcat 1861 gtgtttcagg aggcgcagct ctcggtaggc tcgcttggca aagagttcgg actgaaacgg 1921 gcggtacagt ttcttaatgg ccactttggt accgtttctt ccatcgatag ccgagcttcg 1981 ggggaacagg agcagaggtt ggtgagcgag gaccgaggcg acatcgccga ccccagcgcc 2041 ccacagggct ggcacactcg ctccgctctg tcacactcgc tctgcccagg cacactcgtt 2101 ctgctctggc acactcgttt ccctcaggca cacttaccct gccctggcac actcaccttg 2161 cccagccctc agcgcgctgc cccgcgcagg ggggcgacct gcaccccccc ggcttccccg 2221 cccggggacg agccccgggg acggcggaga cctccgcggg gccccgaccc gagccggcag 2281 cgtggcgggg ccgcctgggt ccccacaacc ggaacaagtt ggcagcaggg aacaaagcga 2341 aagcgccgcg ggctgcgccc cgccgcggct cccccccggc ccccagcccc ttccctcggc 2401 cggggggcgc agccctgtcc ctgccccttc ccgctcacca gacggctccg taggcgccgg 2461 agcccacggg ctgcaggtcc cggtagcggt cccgcacttc ccagagggtt ttggtgatct 2521 cctggcggta gaagccgttc ttgggggagg acatggtgcc gcggccccct gccggcaccc 2581 tccaacaaag agcccggggg gagcgcggga ggcgagcgcc gggctgaggc gaggcgaggc 2641 gaggggccgg gcttggccgc gctccctcgg cgccgctccc tccctctgcc cgcccctgcc 2701 ccgcacagcc cggccgggct gccccgggga ccgggaggga tccgccagcc ggcccggggc 2761 agccgggagc cgggtgtcgg ccacggcagg tgccggttag gtagggcggg agcggcgtgt 2821 ggcagcgcct cagcccgcct ccgtggtggc ggcgttcccg tggccccgtg tgaggagctc 2881 ttccagcagc tctggcgctt cttctcccct cagtaacgcg gccaaggggg tgcgggacac 2941 cccacggaca ccccaggcgg ctctcccttg gagacaccga gtggcagacc cacaggaggg 3001 gcccggtgac ccgcaggtgt tgtcgaggtg gaggacggcg agctgcccag cgtggttcac 3061 tgtgtgtgcc tggcggtgtg tacccagaca aacgtgctgg gtgaggcttt tgctctagca 3121 ggacacgctt aaaatccatc tgctcctctt ggcaccgttg tgtgctgcct cgtgtctgtg 3181 ggtttggagg ggtgacatgt atttttgcaa agctcaagag atcttcccaa ttccagtcgt 3241 tgcccccatg aaatcggtct tggcggtggc ggctggaact gggacagttc ctggagctga 3301 caggagcaaa tggatggctg gtgtggtggc agaggctcag cgagcacgtg ccgtgctacg 3361 tgttgaaatc ctggcgtgaa ttaggggtgc gttgagtcct tgctatgaag ctgaaagcaa 3421 atacatccca gccttcttct tgtgtataca cacaccgtgg tgtggcacct ctgggctcat 3481 tctgtgttag agctttggat ttgatagctg acttttaatg aaagcgttaa gggatataag 3541 acaaaaaata aaagtggaaa gaagaagaaa cgacagttac agataaagga gaaaaactgc 3601 atttagttat attcttagag gccactgaat ttttttttct gacccgtatg atatattact 3661 ggtaaactgg agcacagaaa tacatgatgg tcgtgccaga cagtaggtgc tgcatacaca 3721 aagggcacaa gcagcagcag aagctctgaa aagtaagcag ggacagaggg aggacggggc 3781 aatccttcac agccagacag aggggttgtg cctgaccccc ttcttcctgc agctccgtgt 3841 ttgtgcagaa gtgtttgctc acagaagaag taagggagtg aatgtctttg tgctatgaca 3901 gtccttggtg gctcccacac atacactgag gggctgtaac ttagtctgat gagagctggg 3961 agtacaaaag tgagctttca aatcaccctt gcacaaagct gcgcagctgt ggacttccca 4021 cttcacctca ggatcagacc caaagtttca acaatattta atactgttaa atagaaacaa 4081 gtgtatcctt aatttagttg ctaaagcaag tgatcccctg cacatttggt gtgatatgaa 4141 acagttcaaa cacgtgctta aaaccactgc agtgctggaa gatggaaaat agcaaccttc 4201 acggtgtttt gatagtaaat aggcctggtc tagcatgtgt aaggcaaaga cctactttaa 4261 aaaacgcatt atgttttctc tgtgtgtata taattagaat ccttgccctt tgttttgtct 4321 gacttcaccc ctgagcaatg ttgctgaggt taggtaattc agacttcctg tcactagagt 4381 tcgttttgtg gcttagctag acaagggcaa tctggccagg ttgcattgtt cccgaggcct 4441 ttttggtagt tgccaggggt ccagaccttt ctgtgtgtaa ctactaaacc tgggagagca 4501 gtcctgccct gcctcctccc attatttgca tatcagatac aaattcacaa catccttcca 4561 ccatacaggt gttttccagt gctgctctct gctgatattt gacctgtttg actccctgtt 4621 ttaatgagaa cggaaaccaa ccttctgaca ctcggcaggt aatgcaaggc tcgtgtcaac 4681 tgttagatta atggtacaca tttgtttttc aaacccacag tcccagcaga ttttgtttgt 4741 ttgtttgctt tttaatttct gacatcacct ttatgcactc tttggcattt tgatggtggc 4801 tggagtgaaa tatggtatgg gcgaggtgaa ggctagagag cggtacctct tactcagttt 4861 tgagcgactt ttatttaaat tattaaatta tttaattatt taaactacat ttaatgacaa 4921 atatatatgt atgtatataa tacaatgaga atttattcta cttttggtct acagcccatt 4981 tttccttaat ccagtcatgg caaaa // LOCUS BMBB01000007 5005 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_7. ACCESSION BMBB01000007 BMBB01000000 VERSION BMBB01000007.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5005) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5005 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_7" BASE COUNT 1211 a 1269 c 1349 g 1176 t ORIGIN 1 aagagagagg ggaccgaggg gctgcaggcg ctgcaggcag atggggaagg agtccccttg 61 ggcctggaga caaggagcca cagccagcag caccttgggc agggctcaga gcctgcgctt 121 aacatgggct gggggacaca gcaggcagcc cccaggggtt cttctccaag ggagccccac 181 cgagagagag gtccatcatg gcacccagca gagctgcagg aatcagaagg ctacgcccaa 241 cttccccaac ctttgcccag ttccttgctg caataaccct cttgtaggag ctctgccctt 301 ggatagtggg ggtcaagtgt ctgttgagct ctgcagggct ggcaccacca tcccatagca 361 gctgggtgcc cagcccaggg ccttcagcaa gcacgagggg cttgtcccca gcaggggccc 421 ctccagaact ccagggaaag ccaccctttg cactgaggaa gcccttggcc ctgcttctgc 481 aaatgccctc tgcttcctgg gaccagtcgc actggcaggg cttttcccca gggctggtgg 541 tacaggaccc ccagctgtga gcagctggca gagctggaag cttgctctct gccatgccca 601 aggtgcgctc tgctttctgg ctgtgccagc ccgctttgca ttccccacca cagcgcccct 661 tttcccacgg tggggataga aagggtgctg tgctgcaggg atgggtaggg gtcttgggga 721 aggtgggaga tgttgcctgg gctgaaaatc attcacagca ataccctggg gggcttcacc 781 ccctggcttc aactctcagc agggcttcct acaattattt ggaagaacaa ggatgcagag 841 tgaaaggggg agcagtgtgg ggtaaactat tcaggatgct tttgtgagga cagccacaag 901 ttgccaaagg cagggagtgc aggaaaagcc tccagatggc tgatagcaac caagtttcac 961 tgcccaagca tgccacctgt ctgccaacct ttgtcccttc ccaccccttc tctgatttcc 1021 agatagaaaa gcaaagcaag ctccttggaa gtgccatggc ttctctgctc ccggccccag 1081 aatggcagag gatgattttg tgctcctttt gccaggagct cttcaagaca ttgttgacct 1141 ttgatggctg caagcaccgg atctgctgct tttgtgccag acgaatctgg ggccaagtgg 1201 gtgctgccag gcactgtcct cagtgcagca tgctccctcc agcaaggggc accaaggaca 1261 agggacaagc agctggagac agagacagga gccaggcagc ggctccagag cctgagcagg 1321 agtgccaaga gcaccaggag gcccttgagc tcttctgcct ggaggaccaa acccccattt 1381 gtgccctctg caccgagtca ctggctcacc gcacccacac cccagtgccc atggaggagg 1441 ctgccgagga gtacaaggta cggagggtgc tgcagagctc cctgcttgaa aggtggaggg 1501 gaaggggctg tgtgtgccta tgcccagcag ggccattccc atctgtagct ttgcctttgg 1561 tcactggaag caaattcact gcccctactt ccatccagag gtgattggtg attgcacatg 1621 actggggaaa caatctattc cataaacaga caggtgatag atttatagca tagtaatgct 1681 gctgcaggtg atgtaagatg atccatcagc agattcaccc actcatttct ccaggcagaa 1741 gctccacggg gctgtgcatg tgtccatggg gaattatcca gccatggacc tgcacgagct 1801 tttgttgatt tgccgtgatc tcacatccat gtcctcatgc atgtggtgtc cttctgtgcc 1861 acccccttgc cacatttgct ttcccccacc agaggaagct ggaggcaact gtaaaactcc 1921 tgcagcagca gaagctggaa gcatggagcc tgaagtccca ggaggaggag aaagtggcgg 1981 agtggaaggc aaggatctcc cttaccagtt ccacgctgct ctgcagggca ggatgctcaa 2041 gggttttggc aagtgccttg gtttcgggtg cttgcttggg catggggtgg cagggatgga 2101 tgctgatgtg cggatcccaa tccaaggaca aatgaggtgt gattttatcc ttgaatggac 2161 acgattatga gtcaaataaa cagttggagc aactgcagca agcactcatc acagctgtat 2221 tagccccgtc tggtgatggg gactgctatg gctctttcgc tgtccccagc catgacctca 2281 aagtctcact ccacagctcg gagccatgtt tccttcccta acccatggtt ccctttctgg 2341 gatatttatg ggaacctctg tatagcagct gctgctctgc actgagatag gttctgggaa 2401 caaaagccag gagtccttgc ccccagtccg cattgtgtcc cttaacctta ctttccaaca 2461 cgacataatg cttccctaag ctccctatgg gttccagcat ttcctttttt tttttttttt 2521 tttcttccct cttttctgaa cccccttcaa agaatacagt ttccagagag agagagaaga 2581 tcgagaagga gtttgaaaag ctgcatgact tcttggacga agaggaggag caactccaga 2641 ggaagctgaa gcgagaggag aagagaacag ccaccaagct ccgcaacagc gtcacccagc 2701 tggccaagca gagccaagct ctgggcaagc tcatcaccga ggtcaaggag aggtgccagc 2761 agccaccttt ggggctgctg aaggtgagat ccctcaagat gcccccttag tctcaccata 2821 acagcttcag acattaaatg agggtactct gcattttatt gttacctttc acaatggcgt 2881 gcatctccaa aactcccagg atttgctttt tgcaggtttt ggaagtatct aattcatctc 2941 agtttcaaca atagacaaga ctaaaacatc cctcatgatt tatgccttga caatgtgttg 3001 cggcatggtt ggtggaggaa ggagattaat tcccagactg cagagctcag gctaattggg 3061 tttctgtaac caccttttgg cctgtttttc tgtacagggg aggttggaag tgaaaatgtg 3121 agggcatgct cgtaatgcag ggtagtgaaa gggagcgcta atggcaaggt ctatcagtct 3181 acatatagtc tatcagtcaa catgatgaaa aaaatcaggg aatattctct cgaggaaaat 3241 tcagagagta aatcctgctt tttgtctgat ttttgttcct tttcaggaca tacaaagctt 3301 gctgagcagg tactgcctcc tctctgtctc ccctggggct ctgcagaaag gaaggaggtg 3361 agtcacagct ttgatggtgc tcttctcagg agtgaaaaca tccaggcaca gaagcaggca 3421 gttgtctcag ctgagctgca ggacacgtac aacatcccca ccatcagaat ttttgagttt 3481 ctaaaccaat ttaaaggtga gtgtgtactg atgatgtatt tattccagtg cctgtcgtgg 3541 ccctgggctt cagcatccat cacttttgga atggagatgg agcctgttca tgctctgggt 3601 gtgcaacagg atcttcctag tgcctcacct gctccatctg gaggattcag agctgggttg 3661 catgaacaac ctcgtgggtt ccttccaact gaggatagtc aatgaacagg catcctagca 3721 gaggacagag acctaattca tgtctctgtt gaaaggccgc attaaagctc aaccatgcaa 3781 gtgtgcccac atgaggcaat tcctgctgtg ggaggagtgc actgctcagc cagatgagcc 3841 ccctgatgac tgttaagaaa gtaattctca atttaacacc tctcagctca caagaccgag 3901 cttggagtca tcttgtttgg gcatagcaag ggccaacaac tctcaaaggg ttgggcgtga 3961 tcacgcagcc aggcagggtc tcaacatatc acggtcatgg atgtaggtgc tgggcattag 4021 gtagcatcat cacatgagct tcttctgctc tttcctgcag tgcaaatgac gttggaccca 4081 aagtctgctc accccagcct cctcctgtcc gaggatggcc agagcgtgag ccatggggga 4141 gcgcggcagg agctgccaga ctacccggag agatttgacc cttacgtctt tgtgctgggt 4201 tcactgagaa ttacagcagg gaggtgctac tgggaggtgg aggtgggaga ccagaccgag 4261 tgggacatcg gggtgtgcag ggaggctgtg aagaggaagg ggaaaggtcc cctgtcccca 4321 caagctggct tctggaggat gtggctgagg aacggtgacc agtacaaggt cctcctgtct 4381 catcccatca ccctttccgt caaacaaaag ccaaagagag tggggatcta cttggattac 4441 aaaggtgggg aagtgtcctt ttacaacgtg acccaccaga cccacctgta tacttacagt 4501 ggggctttca gagatgcact gcgacccttc ttcagccctg gcttgtccca gggagggaga 4561 aatgcatctc cccttgtggt ctgcccatcc atgaatcaga atgaggggtg agcctccatc 4621 atcatcatga tgtcctctcc ccattcccac ctccaaatgc atggctcagg actgggagga 4681 ctcagctcag gccccaccat gggaaggagt gggatggagg aatggttaca gcagggcatg 4741 tcccccaaaa tttactaaaa tgaaaactgc agagaataaa taaaatcctt ttctttttct 4801 tcatttcttt ttttattttt atttttagtt gttgtaatat gacacacttt gaactcacct 4861 gtgtcaaaac taaaacaaac aaacaaacaa aaaaacaaaa aacacacctt tagggaaatt 4921 gggaaaatta ggggaaatta gagaaatctg aattggtcag tttgtcaaaa ttttttgctg 4981 tcactttaga ggaggagcag aaggg // LOCUS BMBB01000008 5005 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_8. ACCESSION BMBB01000008 BMBB01000000 VERSION BMBB01000008.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5005) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5005 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_8" assembly_gap 3643..3755 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4081..4120 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" BASE COUNT 1454 a 968 c 760 g 1670 t ORIGIN 1 cttttacctt tctgattctc tcccctgtca cacctgagga gagcgaatga gtgtctgcat 61 ggtacttttc tgcctgccag gttaaactac aactctgttt tttgaatgtc tcattgttaa 121 gttttctact cattcttcat atatttaaaa gaagttacat tcattatgaa acatctaggc 181 attattattg ctcctgttgt ccgcacccat tcaaatgtta acgacaggta aacataattc 241 atttagcact catgcatatt ggcaattctt atctatttca gaagtagaag atagctgtga 301 agacactttg gtaactatca gtctccacta gtgaagaaag ttatgaaata aaggtctttc 361 tgattttcac agcattcacc aagaaaatat accaggaagt actcatcaag tggcattttc 421 tactttttcc cccctcattt ttttctctat tcattttatt tctttggatt aacgtgcttc 481 tgttagatta tttcaaaaaa atttcctact taaagaaaat atttatttct aactaaataa 541 gaaaatcaca aggtacttgt ccaggcatca actatctggc agtaattttt tcttcctctg 601 tagtccagtt ccaatggtgg ggacctgcag taaaccctgt atgtagatga aagtcgccat 661 caggcctatg ctactatgtt gcacctggga attcctagaa acacctggcc atctctgggg 721 ctatatccca taattcagtt cactctcaat tactgtctat cacagtatgt tggaggtgga 781 gagaaccacg aagaggtgag ggcttcctta aacctagtcc tggaagaatc ccttcttcac 841 ttttacccaa attcattgcc aagagaagtc aacagttata ttcctcccct cagctatgcc 901 acaggcagaa acaattcagc tctgagtaat gcagctcata gtccactaag aaacattgac 961 aatttgatat ctgtgggtta gcccccaact taatttggct tttttaaggt aaattttcct 1021 cacaagaaga aaaattgacc aggcatcagc agctttttct atatgttatt ttctattctc 1081 ttagctaagc aaatcccaat tacctaatta tctcacctta attttttttt tgtcactatg 1141 gctaattttt cacttatctc attttttctt gatgctcaga atgtcttctc cctttcctac 1201 tcactacagt tacctaagat ccaaaggttc atgaaaatcc tcttttttga acctcgtact 1261 cttatacata gaccaagatc attcctttaa taactttact aaaacctaca gacatggttc 1321 tgctaacctc ataacctcct ttctctaaag actggaaaaa aacacataat gaaataagat 1381 ggcatatgat ggtctagtga ttatttacaa gaaaaagatc ttcccaatca cctgtattca 1441 tattctgttt tttcatagtt agtacttaga gccaagaact gacttacttg gccctaatgt 1501 caactttgaa tgcagttaca aacacaaatg agaagaagtt accaggtgat taactctata 1561 ctatcacaga atacctttta acactgtata ctaacataat tgatgtcctg gctcttgttg 1621 ctgcagttca agtagttttt taatcaacca agagtgaact ctgcctggta ctgttgtact 1681 tacttgaaaa ttctcacacc ttctggaagt ttataactct acatactagt caaggttttg 1741 tctctttata gtgttgttct ttgtttcttt tcttacggac tgaagaaatc tgttataagt 1801 cctttctgtg ggaacactaa gacctgtagg gcttatgtta gttgttgtct tcccaagaaa 1861 tcaagacaaa acatatgtcc catgttttcc tacacaaaac caagactaaa aacctgaaag 1921 ggtttttgaa gaattttagg tttggaaaca ttataaaatt agttaattag cttttagatg 1981 cttgagttga ttctcaaaat aaacaaataa ataaataaat aaaaatgaaa ataaagggaa 2041 aaaataagtg atcttcaata aagattatta aacacatgtt tctactgcag agttggattt 2101 taagattttt tctttttttt ctctaaacct tatcaccttc aactaaaata tttgagcaac 2161 ctggttgagt gcaagatgtc cctgcccatg gcaggagggt tggaattaga tgatctttaa 2221 ggttctttcc aacccaaagc attttatcat tcaatgattc aatgatttcc tagggtttta 2281 tctatctatc tacctgtttg cctgtctgtc tatctatcta ttcatttatt tatttattta 2341 aatctaggag aactgaatac ctggagaggt atgacaccat atttgctact agaagctaat 2401 ctagcagcta tctagggttg cacacatttt aacaaaatct aaaataatct tactgatcaa 2461 aaatcagcat gctgaactca ctttatacta agaaattcta ctgccagtat tctttttctt 2521 gtgccagttc tgtacttcac cagctcagta atgttacatt tgctttcttc aatatatgct 2581 tgttccccag gccctgaacc ttacagactt gagttacaca taaaaataaa ataataataa 2641 ttccacaaat acaactatat acttataggg ttgaaaagga catggaagtt aatttaatct 2701 gtccttctga ctcagtacag gatcatttta ggtcatggtg acagatgttt acgtagttgc 2761 caacaacaaa ggccagcagt ctgctccagc tgttctgcag tcttctggag tgtttcacta 2821 tctgtatcat tagaaagttt ttcctcatga ctagcctgtg tataggcttg gtgacgtggc 2881 ataaacaaga gttaagcacc cagttctcac tgaatgtcag tgagagactg ttacctaatt 2941 tcctcatatc atgtgtgcct ttaacatctc tctatattta taatcagatt tattttatta 3001 atgcatattt ttataaagat tagaatttaa agtatggttt tctccctgaa caaatacatt 3061 tttaaactgc ttaatttcat ctagaatatt tagagttgcc acaaataagt aaccatgaaa 3121 atgtagtgat tcattagaga gcaaagtaac agatgtgaag aacttccagt agagatggga 3181 tggagcaatg attccctttc ataatccttg aaatagaaaa cagacactta ttcattatgg 3241 tatgccaaac agtctttggg tagcaatctc agaatgcaga ggtgtcaaat tagctgtggg 3301 aggtctcctg actagaagat tacagcaaaa taatcatgag acataacaaa gagtcacaca 3361 ggagaagaat gctacgttaa ttagctgtgc ttgtcctcag actattttta ttctgaatct 3421 gcatttacat tctattgtgc tgctgcatct ccataggctg accctcccac cctcaccacc 3481 tcatatggac cgttttgctg ccatattatg tatacagagg cagcacagga tctcaacatc 3541 agccactgtt tttttttgtt gttgttgttt ccatgtgtca tcttcactat ttaaattact 3601 tgaagttatg acaaatccct tcaaattgtt tatctagtgt gannnnnnnn nnnnnnnnnn 3661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnttttt tttttttttt ttttccatca 3781 tacactatgt taactattgt gtctttttat attatggact ttatgaaata ggctctgcgc 3841 attatatcac agtccttgcc ctaaagttgt taaaacacat ctcagttgca agcagattca 3901 acgtcactag attcctcttt ttcctatcaa aatatggtaa ttagcaacat tctttccact 3961 tacacttttg taatttctta aaatcaccat ttaacaaaat gtaatgacca tatcataaag 4021 tactactgat ttttggaata tttctaatag aattcagagg ttttatatca gttttctgag 4081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn actgctgggt cagaataagc 4141 tctatcaagc acaacacctg gctgtacacg gaggcttaag aggaaatata agaacaggca 4201 caacacatag ttacactttt atgactacat ataatagtac ttttcctgac tgctttccct 4261 gcttctggtg actggtggct caacaatttc ttgataatat aaggcaaagt cattgcaaag 4321 tccttcacac atttctcttc tatgaacttt tccatactac tcttgaaagt atctttttca 4381 catatccttc cttcatcagg gaattttgca gcttcactac atagtttgag atgagctctc 4441 tcttcttctc tgtcttaaaa taaataaata aataataaaa aaataaatct atgtttatgg 4501 tcttcatctc ctagttcttc taatggaaga gagagagaac aactgatcct tactaagcct 4561 ctcaatgtta cctacagttt ctgagatatg tgacatatct ccccctttcc agttaagact 4621 cctggtttgt ttagtcactt ttccagcggg aatgtattct gtaactttga acaaacttct 4681 cactattcta tgagcctttc actgctcagc tatacccttt atgagaaggg gaaccagaac 4741 tgcacagact gtgtgatagg acacactctg tggatgtata gaggtataat gacctttcct 4801 gtttatatct ctattctggc ctcagtaatt tgctacttgt tttattgatc tgtatataag 4861 actaatttga cgttttccta aaattgtcta cagcagcttc aagatcttat tcccaggtca 4921 tcatagaatc acagaatggg cagggttgga caggacctct ggagatcatc taatcaaacc 4981 cctctgccaa gcaggatcac ctaga // LOCUS BMBB01000009 5005 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_9. ACCESSION BMBB01000009 BMBB01000000 VERSION BMBB01000009.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5005) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5005 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_9" BASE COUNT 1531 a 922 c 965 g 1587 t ORIGIN 1 gtcctgaaca gctcaaagtc agccctccgg aagtccaata cagcggtttt actggtcccc 61 ttcctggctt cgccaagaat agagaattct actattttgt ggtcactctg cccaagacag 121 ctcccgacca ccatatctcc caccagtcca tcactgtttg ttcacgttca tataaagaat 181 ttattttcat ttttgccatg gttctttgat gctttccctc tgcatttgaa ggattattta 241 atacagtgca atattcttgt aactcagaat ctgagacaag cacaaaaatg tattggatcc 301 ctgcttgagg agccgtggtg atctaaaagg ccttatttaa gactgagtta catgctgacc 361 cttgttctga tttcttcaat ggcaacttca agagagcctg gataggttca acattttgtt 421 tgtgttcaga gttctgaagc ttcctacact tgaactttcc tttttatgtg gactataaag 481 tgtcataata agtagatgca actttatttt tgtgattttt ttggtgcaag tcttgtgcac 541 tgatttttct aagagtttgg aaatggaaat atcctgatag gaaaattttg gctttttatt 601 tgtcagagtc tctcatgttt ctttagattt aagagttgcc tagctgtaag gagcttcatg 661 taacaggcca aacactgtta atgcaagtag ctgcatgtaa tatcttaaaa tagacaacca 721 accaaccaaa aaaaataatc accaccaaca aaaacccaca ccacaatcac aacaactttt 781 acacttaatg tttcagaatg aattggcttc aatttttgac ggatttcagg gtaactgttt 841 gcatgatgaa attctaagtt aaattaacct gttttacaaa tactaaatga tactaactgg 901 tgcattcatg atataatttc ccagcttcgg aaaacaattt gcagaacaga cgtctgaaac 961 ttgactatga agaaatcaca ccatgcttaa aagatgtgac tctgatttgg gaaaaaatgt 1021 tgagtacacc tggaaggtca aagattaaat ttgacatgga aaaaatacac tctgctgttg 1081 ggcaaggtaa gcactgtttg ttattttgag tcattgaagt gtgcgtaaat tgaaaaggaa 1141 tagggtgact ctttaactac tccttataac caggttcttg ctggagctgt ttctcaggtt 1201 gctgactaca cgagtaatga tgtttggtat cttcatggtt atttgtatgc atgtaacttt 1261 ccctttcagc attagctgca gttgtattaa tggggttaaa atacctgggg ttctctcttt 1321 tttaacataa actctgctta cgggaaaggt gtatagtacc tctgtgtatc ataatagttg 1381 caacccaatt ttataaacaa agttgtaatt aaagaaatga gtctggataa tgccaaagac 1441 atgaccgtgt aaagaactga agaagctgtg tgcactggaa attctggaaa ttctgttcca 1501 gcctggctaa tacatgtaca tacaaacact atacattact atttctctag aactgctttt 1561 tttttgtttg ttttttgttt tctgagatga actaagcatg tgcttacagt cttcctcgga 1621 aatgcaggac tgagtgagca gacctcatct tcgttgcatc aagaaaaata taacctatgg 1681 aagtttttta aaagttctaa aaaattgggt tattggtcaa tgttacttat gccatggttg 1741 gacctgaagg ctgtatgctc agtgctgtat gaagctgatg ctgaagacag cttctccaag 1801 gagctttcta tagttttata caaagttttt caatgtgtaa aggaagtatc aagaattcac 1861 tgctagcaga tgctgtttaa tactgtaaat actgagccta cctgtatgtt gttatctgag 1921 caagttgcac caaattgtcc atttgtaatg actgggtagc tccacatttc taacagtatc 1981 aaatattccc agcacagata actgcagagt acaaaaagct cattaccaca ggtgtccttc 2041 ctttcatata gataaaggcc tctgtccagt cagtatgtga acatgagaaa aacttgattt 2101 ctgttgatag tccagtgatg ctggcctgcg ttggtgttca agctagcagt ttaacttgaa 2161 gtgatgcaaa ataaataagt aaatccctgc ttaatggatt gctactaata aaacagatac 2221 aagtagccag cagatgggta aataatccat agatcttaat gctacaaaca tctctataga 2281 tcctaattgt ggcaaaacca agtttttaga gtgatgtcaa acttcatata aatgcagaaa 2341 tgaaaaatgc atttaaattc aactgagcaa gttctagttt agaccgaagc tttaaaaata 2401 acttgagtaa gcaaggcaaa caagcaagaa atgcaagatt cagtaggcat ggggcttaaa 2461 ttaggatagt aaatatgtag tattgaccca taacatacac tgtagtagct gtttaagtat 2521 aatgcatatt tcatttacat gtacaatgca gcatccagag atgaactcaa tatggaacta 2581 tttctcttaa gggaacttta attcacttgt aattttgcat ctgtagatgt gctctattaa 2641 gccaattcta ccctatgtga gacattcatc ctcactgagg ttaacaggac tttatatgga 2701 tatctgaaga ggcactttcc ctcactgctt catgttggag actttcaata atcagggtta 2761 agctccctaa agtaatttat agacacacag tctaaatata cttgtggttt ggattcaaat 2821 accatacaga tctactagca tttcatgcta aagtagttgt ctctgagtta cagtagtcta 2881 gtaaaaataa gtattgcaga gagaaattca tatccttttg tgctgatatg agagacagta 2941 aagttgctgt tttgttatct tttcatgcaa gatgtatgct tgagttaatt ttttatttct 3001 tctattgctg tagacatcca tacgttacaa atataatggg ggaaaaaaaa agcaaacctc 3061 tgtagaactt aaagccatag gttgcttcaa actgtaatac ctggttccag tatatcatgg 3121 agtaaacaga atacttgccc aaagaatagg atattgaatt cttgtgtaga tgatataata 3181 gtgccaatct tgtgctgaaa aaagtatgca tgtaataata acctttctgt tcctttcaga 3241 gctttgcata tagatgcaga taaaggttac tgttatgtat gtgaaatagt taagtagctt 3301 catcccttga tacagagaaa gaaattcatg ctttaataga tttttacttg caccagtcat 3361 tcagcaagcc catagcaaaa ttggaaatta aatacttgct tcctgagttc ttggcttttg 3421 ttgtagtctc tagaccacat ctcatttgta cttgttaata ctttgggtat atatgcatcc 3481 cagcttcctg aaatttactc ccaacagaaa tgtcagtgct gtatttgggg aaaatgttac 3541 ttacttttat tgtagagcct tatcatatat tttaatatgg aaaatggatg ataagcatat 3601 agtttttcag agaccagcat tacaattttt gctgcctcct ctagtacttc ttagactgaa 3661 tgtagctgct aaccttagac ttagacaagc tcaccctgtt tccaccttaa atctgtcgtg 3721 ctacattgct ggtgtctttt attggtgaag gaagtacaag cacattagtt tgatctgctt 3781 ctatggtcta ctggaggcag cagatagata tctagcagat atggatctgc ttgcatatct 3841 agatacaaga tacagatctt tagttcctga agcctgttag ctcaactcta gctgaaccct 3901 cagtatcagt gggaatttac agttttaatg accttcttct ctcaggagta ccacgtcacc 3961 accgtgggga gatctggaaa tttctagcag agcagtacca tcttaaacat cattttccaa 4021 ataaacaaca accaaaggac acaccttata aagaactcct gaaacagcta acttcccagc 4081 aacatgcaat acttattgac ctaggtaagt acaggagtgc tgtgaaatta aaataagggt 4141 tttaagatct ccagaagaga aataaataaa ataaagtaac acataaaaag cctctcaaca 4201 tttaataata ggttgttggt aaaaactgct tttgatgtgg tgtaagtgag aactattact 4261 tggcaccaca aagaaaatat aaaatctgcc tttcaagcac aaaggtcctt tgcaacatgt 4321 ggtaattaga ggcagaacca gatgcatctc taatgcatct gtgtttcaga tattgatggt 4381 gaactccaca gatcagtgga atacgaattg tcaagaaaat aagtcaacat ttaagtgcag 4441 ttggttgagt aacaggtgct gttcattcct gtagtccagt gttttgctgt ctcctaaaca 4501 cctttgcttg aagtattgca gaagtgtttt ctggggaagg gaggtgaagg gagggggggc 4561 gggtttaaat gggtagctgc tagtacgtgg tatttttact tctgttaaaa cagatatgaa 4621 cagctcaaca gctctttttt taaggcaggg tgttctgcct aactgtaagc agtagctggc 4681 tcctaattta ggatagttta attggtctgt ggaggcacat ctgcttcact ccactgagta 4741 cagtaaagat tagaaaccaa ggctcttgaa tttttgaagt gtccgttata gaatcataga 4801 atggtttgcg ttggtaggga ccttaaagat catctatttc caccctgctg ccatgggcac 4861 agacacctcc caccagacca ggttgctcaa agccccatcc agcctggcct tgaacacctc 4921 caggggtggg gcatccacag cttctctggg caacctgtgc cagtgcctca ccaccctcac 4981 agtgaagaat ttctccctaa tgtct // LOCUS BMBB01000010 5006 bp DNA linear VRT 22-AUG-2020 DEFINITION Cygnus cygnus DNA, Cycy_10. ACCESSION BMBB01000010 BMBB01000000 VERSION BMBB01000010.1 DBLINK BioProject:PRJDB10192 BioSample:SAMD00237433 KEYWORDS WGS; HIGH_QUALITY_DRAFT. SOURCE Cygnus cygnus (common whooper) ORGANISM Cygnus cygnus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus. REFERENCE 1 (bases 1 to 5006) AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Direct Submission JOURNAL Submitted (20-AUG-2020) to the DDBJ/EMBL/GenBank databases. Contact:Nobuyoshi Nakajima National Institute for Environmental Studies, Center for Environmental Biology and Ecosystem Studies; Onogawa 16-2, Tsukuba, Ibaraki 305-8506, Japan REFERENCE 2 AUTHORS Nakajima,N., Onuma,M., Saito,K., Watanabe,Y. and Endoh,D. TITLE Draft genome sequence of Whooper swan JOURNAL Unpublished (2020) COMMENT Original tissue is stored at NIES ##Genome-Assembly-Data-START## Assembly Method :: Genomic Workbench v. 20.02 Assembly Name :: C_cygnus_scaffold_01 Genome Coverage :: 57X Sequencing Technology :: Illumina Novaseq6000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5006 /collection_date="2012-04-05" /country="Japan:Hokkaido" /db_xref="taxon:219595" /mol_type="genomic DNA" /note="original tissue is stored in NIES under the ID 2536A" /organism="Cygnus cygnus" /submitter_seqid="Cycy_10" BASE COUNT 1628 a 882 c 915 g 1581 t ORIGIN 1 tggacagtga ggtggattga aaactgactt aacagtcagg cccagagtgt gaccaggggc 61 aaaaagtcca tttggagacc agttactagt ggtatacctc cagggattga tactggggcc 121 aatgctgctt aacatctgtg ttaatgacat gaacaatgaa acacagcaca ccttgagcaa 181 gttttcagac agtaaaagac tgagtactgt gaagaaattt aactccatca cagctgaaac 241 catgacatcc ttaaatcagc atagtccata attctgtctg catcttagat taggttctgt 301 atatgtgtgt gtatggatgt acatgtatat ctatatatct atctctgtgt gtatactctg 361 tgtgtatatg tgtgtatgtg taagtattcc atctgcattt gaaaaaaagg cacagaaaaa 421 aaaagccctc aagctgttgt cagcattctg gcaccaaaaa aaaaaaaaaa aaaaagagag 481 agagggagaa aaactgaaag tatggtgtag gtttgtaagg tttgtaatat taattccatc 541 aggctgcttt gtttatttgc atgatgtcat catcctgatt tgtttattta catgatgtga 601 acatgttcat aaagtaggaa ctgacctgcc aaacacaaac tgctaactgt agcttgtatg 661 actgcagtca gtttcactca catcaatgac atttcatagc aataaattct ctttcactca 721 ttcttgaaaa ttctgatact atatttaggc ataattctaa aaaactcata aggaaaacat 781 tgttaaatac aatttgacag aaactacaac tactcctctt tatctgacct gctctgtaca 841 acacagactg caggactaca tgtttcggag tacacctctc cgtactgtat aggttttggc 901 tgggacaggg ttaattttct tcgtagtagc tcatatcatg ctatgatttg gatttgtgac 961 caaaacagcc ttgacaacat gatgatgttt tagctattgc tgaacagtgt ttatacagca 1021 tcaaagcctt cccaaaagcc atttttcatg cagccctgcc agtgaggaga ctgggagcgc 1081 atgagaagtt gggaggggac acagccagga cagctgactc caattgacca aagggatatt 1141 ccataccatg taaggtttat tgctcagcaa taaaagctgg ggggggaaag gaggagagga 1201 aggatgtttg gaattgtggt gtttgtcttt ccaagtaact gttatgtgtt atgaagccct 1261 gcattcttgg aaatggctaa aaatctgcct gctgatggga agcagtgaat gaattcctta 1321 ttttacttta cttccagacg cagctattgc tttacctgtt aaactgtcca tgtttcagcc 1381 catgagtttt ctcactttta ctcttccgat tcccttccct agagtgagca aacagctttg 1441 tggtgcttag ctgcctacag ggattaatcc acatcaggta ccggtagttt tgcataatcc 1501 tgagaaaaac taataattcc tctttgtctt tattttaaaa atactttcca cattataacg 1561 gagaatcaaa tatattttcc aattataaat gaagcagatt tattaggaat atctgcaaag 1621 cagaataaac ccacttgtgt tccccttttc actgtcttct ttgaactgtt attgacagaa 1681 gacagtgaaa tagataagac caaatccaac caggattaga aaattcctag taggtcattc 1741 acctcctctg aaaatatcat cttgtctgca ttacagtctt gaaaattaaa accttggagg 1801 aacatctctg aaaaaaaaaa tattctaaga gttctgatca atgttccaaa ataaacgaat 1861 attcataaat agacaattac attcttctgc atttttaacc tactgtattc aactcatctt 1921 tcagatagac atgaaaggga acagaatgta ttttgtatag ctttcagttt tcctacagta 1981 aaggataaac tgtcagaaag gaaagtatgc agaaatgttg cttagactaa ttgtaatttg 2041 ttgggaattg tgttataaca ggataaacac atgttatttc ttgtaattta aatcacttac 2101 tgacttgcat aagttcagtt ctagttggca taatgaagct gattaatatc aatcaaaaga 2161 ggtaaaaaag tggattttgt gtgtttttat taaaaaaaac aacatacctc ttattttata 2221 atttaatctc ttcatagaca tatctgatac aagtataatt tttaagcata cctgtagtgt 2281 acagagttcc tatgaaacct ttttctacta aggagacctt ttattctttc tgcttgataa 2341 tccaggttta ttttcctcta aatataaagc aagtcaagaa agtactggca ggatattgta 2401 gctaaaacct ttccaataaa taaccttatt cagtagttct ctctttgtat taatatgatg 2461 tagttgcagt caaacctagg aataatcagt atcaggtatt tagagaaatt tgtagactca 2521 aattgactga aatttaacaa attatctgat gacatattgt ttaatatgct gttctcttta 2581 ccactaggtg tcttcaagac aaagcctagg ttccagacct gggctggaag gacaccatga 2641 atgaatctta aaggtctgtc tacctctatt ccacataacc accaacactt tcataattgt 2701 gttccccaga tattttctgc atgtgccatt ataccatgtc ctaaaacaca gaaaaacata 2761 taatcaggta ttcccggggg gacaggggaa ttggtaagat aatagcacat accattacaa 2821 gatggcaatg ctctgttcca tgctggcttt ccatctgcac caattacaca cgttatagtt 2881 gaaggatcaa taattttata tccagagtca cactggtaag taatagttga accaagctta 2941 aagtctgttc caattcttgt cccattcatg atgtttccag gatcaaaaca agcttcccgt 3001 ggcttttctg ttaaaatgaa tggaagtaaa tctatatgca cttttaactt aaaaattata 3061 tatatatata tatatatatc aaacactgaa aacaaccttc agtgtttttg tttttttttc 3121 tagtcagttt acattttttc accagataat taaaatattt ttcttgtttc tctatgttta 3181 caagatcatg gatgtttgca ttaaattagt ttttccggcc aaggaaatta tacagagaag 3241 acctaacctg caacattttc tttctacctt ttcttagtag aaatgcccac aggatgaatg 3301 atttcaatga agtctagtaa tgtagaagaa aagctgattt ctagaaacta caacttaaca 3361 ctactgtctt ttttaaccaa acatcattct cagtactcag taacttctgg ttagaaagct 3421 gccatactat gaaataactt aaaaatgtat tgctacttta tgtttcatac ttaagaagat 3481 ctaacaactg gagcttgaag tctaatgata taagcacagc agttattttc tgccatgagc 3541 taagtggtat gaaatcttta aatcaaagtg agtcttgaca ttgattttaa caacagtggg 3601 atttcactca taacatatgg caagttaaaa tacaaagaac agggaaggga gaaataatgt 3661 acattagaaa tgactttgtt taaagaatgt gattgagatg atcttcaaac aggtgggatt 3721 aaggggtaga acattcttta taaaaaggat atgaaaacta aatattatta tacagttgat 3781 agctgtcata cttttttttt cttaaaaaag gcttaaatac aactcagtta caatttatga 3841 aaaaaatgtt acataagttt tttaaataat attttgctaa atatttgaac tctttaggag 3901 ggaagtacac acctaatata aatgggaggc taagattttt tattgaaaaa ttctggagtc 3961 aagttcatag tcaaatttta ctccatggct ccttccctta ttaaatgtta ataaagcatg 4021 tattttaatg aaacactcaa gggaaattat cagaaagtga aacttggtgt caataagcag 4081 aaatgcaaat attttttata taaaatatta aatagcataa ctatagtatt gaattactag 4141 gcacaaactt catattgaac ataacttttc aaaatatgct gttccgctcc tatatatttt 4201 ttatatttca tttaacttac agttgcatag aggtacatat accagcatat gctgagaaca 4261 gaaaataaag taaaaacata attccttagt gtagttgaac atttgtagag atcacctttt 4321 atctccttat taagttctgc tcaacttccc atttttttcc ttgcaggcaa acatcccaaa 4381 ctaatggttt tcccttattt tattattttt tttatttatt ttcagatagg aatgaagaga 4441 ctacattttg ataattgaaa tgacaattac tttgggaaga aaagccatgc caacatgtag 4501 aataatgtgt gatgctggat gaaagatgca aaataaatat aagaatgatg taatagttct 4561 tttaaacctc cctctacttc attgacacaa tacctctatt ctcttttgat atttttgttc 4621 ttacattcct gtattgggtt tatgtggcaa tgctttggta gcagggggct gcaggggtgg 4681 cctctgtgag cagagcccag cagctgcccc gtgtcagatc agagacaact ccagccagct 4741 ccaaaaggga cccgctgctg gccagagctg agccaggaag caacgctggg tggacctctg 4801 ggagagcaga ctgaagaaag gggaagaaaa aaacttgctg cacaacagca gctgggaggg 4861 tgaggagtaa gaaacagccc tgcaaggtca gtgcaggagg gcaggaggtg ctccaggcac 4921 gcagcagcag ttcccctgcg gcctgtggag aggcccctgg tggagcaggc cgtccccctg 4981 cagcccaggg gtcccacacg gagcag //