LOCUS       BK005392                1867 bp    mRNA    linear   ROD 03-FEB-2006
DEFINITION  TPA_exp: Mus musculus reduced pigmentation (Bloc1s3) mRNA, complete
            cds.
ACCESSION   BK005392
VERSION     BK005392.1
KEYWORDS    Third Party Data; TPA; TPA:experimental.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Gwynn,B., Martina,J.A., Bonifacino,J.S., Sviderskaya,E.V.,
            Lamoreux,M.L., Bennett,D.C., Moriyama,K., Huizing,M.,
            Helip-Wooley,A., Gahl,W.A., Webb,L.S., Lambert,A.J. and Peters,L.L.
  TITLE     Reduced pigmentation (rp), a mouse model of Hermansky-Pudlak
            syndrome, encodes a novel component of the BLOC-1 complex
  JOURNAL   Blood 104 (10), 3181-3189 (2004)
   PUBMED   15265785
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Gwynn,B. and Peters,L.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAY-2004) The Jackson Laboratory, 600 Main Street,
            Bar Harbor, ME 04609, USA
COMMENT     THIRD PARTY DATABASE: This TPA record uses data from
            DDBJ/EMBL/GenBank entries BB654378.1 and BC043666.1.
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="between Ckm and Swap2"
     gene            1..1867
                     /gene="Bloc1s3"
                     /gene_synonym="Rp"
     5'UTR           1..70
                     /gene="Bloc1s3"
                     /gene_synonym="Rp"
     CDS             71..658
                     /gene="Bloc1s3"
                     /gene_synonym="Rp"
                     /note="RP; BLOC-1 complex component; complex involved in
                     biogenesis of lysosome related organelles; model for the
                     Hermansky-Pudlak syndrome"
                     /codon_start=1
                     /product="reduced pigmentation"
                     /protein_id="DAA05717.1"
                     /translation="MESSQGRRRRPGTVVPGEAAETDSELSASSSEEELYLGPSGPTR
                     GRPTGLRVAGEAAETDSEPEPEPTVVPVDLPPLVVQRDPAETWGTEETPAMAPARSLL
                     QLRLAESQTRLDHDVAAAVSGVYRRAGRDVAALAGRLAAAQATGLAAAHSVRLARGDL
                     CALAERLDIVAGCRLLPDIRGVPGMEPEQDPGPRA"
     3'UTR           659..1867
                     /gene="Bloc1s3"
                     /gene_synonym="Rp"
     regulatory      1843..1848
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bloc1s3"
                     /gene_synonym="Rp"
     regulatory      1847..1852
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bloc1s3"
                     /gene_synonym="Rp"
BASE COUNT          342 a          515 c          537 g          473 t
ORIGIN      
        1 gagagaccgg ctcacttccg ccaggcagcg gaccccttgg gctcggagcc tcggagaccc
       61 gctccgtgcc atggagtcat cccagggtcg gcggagaagg ccggggacag tggtacctgg
      121 ggaagctgcg gagaccgact cggagctgtc tgcatcctcg tccgaggagg aactatacct
      181 gggtccctcg ggccctacgc gcggccgtcc cacggggctg cgtgtggccg gggaggcggc
      241 ggagaccgac tcggagcctg agcccgagcc cacggttgtg ccggtcgacc tgcccccgct
      301 cgtggtgcag cgcgatccgg cggagacttg gggcacggag gagacccctg ccatggcgcc
      361 tgcgcgctcg ctgctgcagc tccggttggc tgagagccag acgcgcctgg accacgacgt
      421 agcggctgcg gtgagcggcg tgtaccgccg tgcgggtcgc gatgtggccg ccctggcggg
      481 gaggctggcg gctgctcagg ccaccgggct ggcagccgcc cacagcgtgc gcctggcgcg
      541 cggggacctc tgcgcgctcg ccgagcgcct ggatatcgtg gctggctgtc gcttgctgcc
      601 ggacatacga ggggtccctg gtatggagcc cgagcaggac ccgggaccta gagcctaggc
      661 tgtcactctg tgtcccccca cctgactctg cctcttggtg aacattcgta ccacctgtgg
      721 catctgactc tgtttttgtt cctggatcac cgaggcctcc aatgcgtggt agcatttgat
      781 caatgccgac agaagccgaa tcctcgcatc ttctttgata ttcttagcac aattccgggc
      841 tccccaaccc aggttctgtg gctatcaagt agcttagccc ctatccattc tggtcctgtt
      901 tcctaaattc agctttactc ttgggcaaag ccagaggttt gctttctttt gttgagcctt
      961 tctgaattta ggctttgggg ggtagtggtg tctctctagt ttacatccct aaatgatgat
     1021 cactcctgac ccgaggatac cttcctctta cacatatccc tcttaccgac cgctgtggcc
     1081 aaatgcagac caacctaggg cctgggtagt aaccctaatt cttaggcctt tgtgtcaggg
     1141 gcagcgcctc ctggtgtttt gatcgctata gagacatgac accacaaata caaatctacc
     1201 actcactgtg tctctttctg gatgctaaaa ggacttggat tctgacctct atgggcctcg
     1261 aggataacag gttctttttg cctctttggg tttggctctt tgggtgtctt tttggccact
     1321 ccttttgtct ctgtcttaat gaggattcag tgaccttatg tggaagggag ctcgggtggt
     1381 ggggtgagac tgtagctcag tggtgtcgtg tacgcttagt gtgggcggcc ctgggttcaa
     1441 ttcctaggac caccctgctt caaaagaaac aaacaagcac attctttgtt tgtttgtttt
     1501 gtttttgttt tgttttttga gacagggttt ctctgtgtag tcctggctgt cctggaactc
     1561 actttgtaga ccaggctggc ctcaaactca gaaattcacc tgcttctgcc tcccaagtgc
     1621 tgggattaaa ggcgtgtgcc accactgccc ggtcaaacta gaacattctt agatgcctgt
     1681 gtccccttta aaaattaccc agggtggggg gtggggtggg gctggaaagt agaggtcctg
     1741 agttcaaacc ccagaaacca catggtggct cacaaccatc tgtattgaga tctgatgccc
     1801 tcttctggtg tgtctgaaga cagctacaat gtacttatat ataataaata aattattaaa
     1861 aaattta
//