LOCUS BG075049 677 bp mRNA linear EST 12-MAY-2010
DEFINITION H3142F09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3142F09 3', mRNA sequence.
ACCESSION BG075049
VERSION BG075049.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 677)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG075049.1.
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3142 row: F column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..677
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3142F09-3"
/db_xref="taxon:10090"
/clone="H3142F09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 193 a 146 c 124 g 214 t
ORIGIN
1 atgtttgtca aatgggtgaa ttttattgca tatttcctta ttcaagcatc actcagcaac
61 ataacagcaa acaaatgcag aaaggattga gttttgcaca agtccccacc gtttaacctt
121 tccttgtcct taccttgcca cagctagggt tcaataatgt ggaaaactcc ttttaggggt
181 ttagctgatg aaactcagta acacaattca gtaattaaca ctaagaggaa tatctcaaat
241 gtttgagatg tgtatgcaaa aagcaaacta ttgtgtgtcc tgctcaaaca agagtgctca
301 caggagccca taggccttcc cttgctgttg cagggatcct cgtgctttgg ctgccaaggc
361 actggcactg cttggaaagc taagaaactg catctaattg cttcttttta gatgaattta
421 tattcttaca tttctttcca ttttgcctga tttagaccat tgaagttgag ctgagagagt
481 gcaagcttca tcaggcaact tgacatggcc taaccaaacc ttaatagaca cgcatggagg
541 atcccccccc cacacacacc ccaaatcatt ctcttagatc ttagatacaa agtagctttg
601 tgatcttggg caaattattt gcctttgaca cttttttgtt tttattccaa tatatttgtt
661 gggttaatat tgcacaa
//