LOCUS BC170799 1843 bp mRNA linear VRT 20-NOV-2008 DEFINITION Xenopus tropicalis pyruvate kinase, muscle, mRNA (cDNA clone MGC:197526 IMAGE:9040057), complete cds. ACCESSION BC170799 VERSION BC170799.1 KEYWORDS MGC. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE 1 (bases 1 to 1843) AUTHORS Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W. and Richardson,P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 REFERENCE 2 (bases 1 to 1843) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 3 (bases 1 to 1843) AUTHORS Klein,S. and Gerhard,D.S. TITLE Direct Submission JOURNAL Submitted (12-NOV-2008) National Institutes of Health, Xenopus Gene Collection (XGC), National Institute of Child Health and Human Development, 6100 Executive Boulevard, Room 4B01, Rockville, MD 20892-7510, USA REMARK NIH-MGC Project COMMENT Contact: XGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mustafa K. Khokha, Yale University School of Medicine cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRBJ Plate: 1 Row: J Column: 23. FEATURES Location/Qualifiers source 1..1843 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /clone="MGC:197526 IMAGE:9040057" /tissue_type="Neurula,ovary" /clone_lib="NIH_XGC_10" /lab_host="DH10B" /note="Vector: pCR4-TOPO reverse; Clone identification sequence tag: CGTATAAT" gene 1..1843 /gene="pkm2" /gene_synonym="cthbp" /gene_synonym="pk3" /gene_synonym="pklr" /db_xref="GeneID:549224" /db_xref="Xenbase:XB-GENE-485872" CDS 51..1634 /gene="pkm2" /gene_synonym="cthbp" /gene_synonym="pk3" /gene_synonym="pklr" /codon_start=1 /product="pyruvate kinase, muscle" /protein_id="AAI70799.1" /db_xref="GeneID:549224" /db_xref="Xenbase:XB-GENE-485872" /translation="MSEAGSAFIQTQQLHAAMADTFLEHMCRLDIDSEPIVARNTGII CTIGPASRSVEILKEMIKSGMNIARLNFSHGTHEYHAGTIKNVREATESFSSNPIHYR PVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLRITLDDAFQEKCDENILWVDYKNL TKVVKPGSKIYVDDGLISLLVKETGADFCLTEVENGGMLGSKKGVNLPGAAVDLPAVS TKDIQDLQFGVEQNVDMVFASFIRKAADVHAVRKVLGEKGKNIKIISKIENHEGVRRF DEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKP RPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHAIAREAEAAIFHRQLFE ELRRVSPLTRDPTEATAVGAVESSFKCSSGAIIVLTKSGRSAHLVSRYRPRAPIIAVT RNGQTARQAHLYRGIFPVLYREAVHEAWAEDVDMRVNFAMDIGKARGFFKSGDVVIVL TGWRPGSGFTNTMRVVPVP" BASE COUNT 479 a 408 c 483 g 473 t ORIGIN 1 gcggttagcg gaactgtttg ctgctttacg tagattgcac acaggtcaac atgtctgagg 61 caggtagtgc tttcattcag acccagcagc tgcatgctgc catggcagac accttcttgg 121 agcacatgtg ccgtctggac atagactctg agccaattgt ggcacgtaac actggcatta 181 tctgcactat tggcccagcc tcccgttctg tggaaatact aaaggagatg ataaaatctg 241 gaatgaatat tgctcgtctg aacttttccc atggaacaca tgagtaccat gctggcacaa 301 ttaaaaatgt acgtgaagcc accgagagct tttcttccaa tcccattcac taccggcctg 361 tggcagtggc cttggacaca aagggaccag aaatccgcac tggtctcatc aaaggaagtg 421 gtacagcaga agtggagctc aaaaagggag caaccttgcg tatcactctt gatgatgcct 481 tccaggaaaa gtgtgatgag aatatactgt gggtggatta caaaaacctt acaaaagtgg 541 tgaaacctgg cagcaagatc tatgtggatg atggacttat ttccttgctt gttaaagaga 601 ctggtgcaga cttctgcttg actgaggttg agaacggggg catgttagga agcaagaagg 661 gagtgaacct ccctggggca gctgtggatt tgcctgccgt atctacaaaa gatatccaag 721 atctgcagtt tggtgtggag caaaatgttg acatggtttt tgcttctttt atccgaaagg 781 cagcagatgt acatgcagtg aggaaagttc ttggagagaa aggcaaaaac atcaagatta 841 tcagcaaaat tgaaaaccat gagggcgtgc gcaggtttga tgagattcta gaagcaagtg 901 atggtataat ggtggcacgt ggtgaccttg gtattgagat ccctgctgaa aaagtcttcc 961 tggcccagaa gatgatgatt ggacgatgca atcgtgctgg caaacctgtg atctgtgcca 1021 ctcagatgct ggaaagcatg attaaaaagc ctcgtccaac acgcgctgaa ggtagcgatg 1081 tggccaatgc tgtactggat ggggctgact gtataatgtt gtcaggggag actgcaaagg 1141 gagactaccc actggaggct gtccgcatgc agcatgctat tgcacgagag gcagaagcag 1201 ccattttcca ccggcagttg tttgaggaac tgagacgtgt gtccccactg acccgtgatc 1261 ccacagaagc gactgctgtt ggagcagtag agtcatcatt caaatgctcc agtggagcca 1321 tcatcgtgct tactaaatct ggcaggtctg cacatttagt atctcggtac cgcccacgcg 1381 cacccatcat tgctgtgact cgtaatgggc agacagcacg tcaggcacat ctctaccgtg 1441 gcatttttcc tgtcctctat agagaagcag tgcatgaggc atgggctgag gatgttgata 1501 tgagggtcaa ctttgcaatg gacattggca aagcccgtgg ctttttcaag agtggggatg 1561 ttgtgatcgt actcactggc tggcggccag gctctggttt caccaacacc atgcgtgtgg 1621 ttccagtgcc ttaatctgag aacctgctaa caaaactcca aatctgttgt cccctttttt 1681 ctgcactcat caccttgcag atataaactc tgaaggccag attatatacc ctttatttgt 1741 ggcattgaga gagacattag tgtttgtgcg cagcacggaa ttccattgtt ccattgctta 1801 ttacactccc tgtgttagtc ggttattgca agtgctgccc aca //