LOCUS BC170750 1077 bp mRNA linear VRT 20-NOV-2008 DEFINITION Xenopus tropicalis aldo-keto reductase family 1, member A1 (aldehyde reductase), mRNA (cDNA clone MGC:197477 IMAGE:9040008), complete cds. ACCESSION BC170750 VERSION BC170750.1 KEYWORDS MGC. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE 1 (bases 1 to 1077) AUTHORS Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W. and Richardson,P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 REFERENCE 2 (bases 1 to 1077) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 3 (bases 1 to 1077) AUTHORS Klein,S. and Gerhard,D.S. TITLE Direct Submission JOURNAL Submitted (12-NOV-2008) National Institutes of Health, Xenopus Gene Collection (XGC), National Institute of Child Health and Human Development, 6100 Executive Boulevard, Room 4B01, Rockville, MD 20892-7510, USA REMARK NIH-MGC Project COMMENT Contact: XGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mustafa K. Khokha, Yale University School of Medicine cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRBJ Plate: 1 Row: H Column: 22. FEATURES Location/Qualifiers source 1..1077 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /clone="MGC:197477 IMAGE:9040008" /tissue_type="Neurula,ovary" /clone_lib="NIH_XGC_10" /lab_host="DH10B" /note="Vector: pCR4-TOPO reverse; Clone identification sequence tag: CTAAGTCA" gene 1..1077 /gene="akr1a1" /db_xref="GeneID:548891" CDS 44..1027 /gene="akr1a1" /codon_start=1 /product="aldo-keto reductase family 1, member A1 (aldehyde reductase)" /protein_id="AAI70750.1" /db_xref="GeneID:548891" /translation="MATAVEYETLYTGQKIPLIGLGTWKSAPGQVKDAVKYALGVGYR HIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQ DLQLDYLDLYLMHWPYAFKRGDQIFPQNPDGSVQYDLTDYKDTWKAMEKLVKQGLTKA IGLSNFNKRQIDDIISIATVKPAVLQVECHPYLAQNELIAYCHAHGLVFTGYSPLGSP DRSWRKPEDPVLLEEPGIIAMAKKYGKSEAQILLRWQVQRKVVSIPKSVTPTRILQNF QVFDFSLSEEEMQLIGALNKNWRYIIPLITVNGKSVPRDAGHPLYPFNDPY" BASE COUNT 329 a 201 c 262 g 285 t ORIGIN 1 aaggaaactt gagagcgcgg cctgcttgct acaggaggca aaaatggcaa cagctgtcga 61 atatgaaact ctgtacaccg gacagaagat accactgatt gggttaggta cttggaagag 121 tgcacctggc caagtaaaag atgcagtgaa atatgccctt ggagttgggt atcgtcacat 181 tgattgtgcc tttgtttatg ggaatgaaac tgaagtggga gaagccataa aagagagtgt 241 tggatctgat aagggtttat caagagaaga agtatttgtt acctccaagc tttggaataa 301 taaacatcat ccagatgatg tggaatgtgc attaaggaaa acgctgcaag atcttcaact 361 ggattatctg gacctgtacc ttatgcattg gccatatgct ttcaagagag gagatcagat 421 ctttccacag aatcccgatg gatcggtgca gtacgacctt actgattaca aagacacctg 481 gaaggccatg gagaagctgg tgaagcaggg attgaccaag gctattggtc tatccaattt 541 taacaaaaga caaatagatg atatcatcag tattgctact gttaagccag cagtgttaca 601 ggttgagtgc catccatacc ttgcacagaa tgagctgatc gcctattgcc atgcacatgg 661 gcttgtattt acgggctaca gcccattggg aagcccagat cggagttgga ggaaaccaga 721 agatccagtt ctgttagaag agcctggtat tattgcaatg gcaaaaaaat atgggaaatc 781 tgaagcacag attcttctca gatggcaagt tcagcgcaag gttgtcagta ttcctaaaag 841 tgtcacacct actcgtattc ttcagaattt tcaggttttt gacttctctt taagtgaaga 901 agagatgcag ctaattggag cacttaataa aaactggaga tatattatcc cattgataac 961 ggtgaatgga aaatctgttc caagggatgc tggacacccc ttatatccat ttaacgatcc 1021 atactaaaac tactgaggca gctcagtttc caagtagctg tttggggctt tcttggg //