LOCUS BC169535 1001 bp mRNA linear VRT 20-NOV-2008 DEFINITION Xenopus laevis secreted Xwnt8 inhibitor sizzled, mRNA (cDNA clone MGC:196262 IMAGE:9041169), complete cds. ACCESSION BC169535 VERSION BC169535.1 KEYWORDS MGC. SOURCE Xenopus laevis (African clawed frog) ORGANISM Xenopus laevis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus. REFERENCE 1 (bases 1 to 1001) AUTHORS Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W. and Richardson,P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 REFERENCE 2 (bases 1 to 1001) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 3 (bases 1 to 1001) AUTHORS Klein,S. and Gerhard,D.S. TITLE Direct Submission JOURNAL Submitted (12-NOV-2008) National Institutes of Health, Xenopus Gene Collection (XGC), National Institute of Child Health and Human Development, 6100 Executive Boulevard, Room 4B01, Rockville, MD 20892-7510, USA REMARK NIH-MGC Project COMMENT Contact: XGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mustafa K. Khokha, Yale University School of Medicine cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRBJ Plate: 4 Row: I Column: 7. FEATURES Location/Qualifiers source 1..1001 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /clone="MGC:196262 IMAGE:9041169" /tissue_type="Gastrula" /clone_lib="NIH_XGC_18" /lab_host="DH10B" /note="Vector: pCR4-TOPO reverse; Clone identification sequence tag: TCCACAAT" gene 1..1001 /gene="szl" /db_xref="GeneID:398029" CDS 20..865 /gene="szl" /codon_start=1 /product="secreted Xwnt8 inhibitor sizzled" /protein_id="AAI69535.1" /db_xref="GeneID:398029" /translation="MSGVFLLLCASMLACTAAFDIGLSTKCVTIPTEMAMCNDVGYSE MRLPNLMGHTNMAEVVPKSAEWQNLLQTGCHPYARTFLCSLFAPVCLDTFIQPCRSMC VAVRDSCAPVLACHGHSWPESLDCDRFPAGEDMCLDTLSKEYQYSYKELPKPSCQGCP LIEEFFSHKTVLEAFCDNNFAVKVKLAKKKSASGLYEYETEGPVEFIKQGLLLPYDTR TMIEQWLLINENCAQKLIRTRPTVYVIAGEIHHGKVKVNRIFHWQKKDSQLTLATRRW RHHKC" BASE COUNT 283 a 240 c 225 g 253 t ORIGIN 1 ggcacgagca actgcgaaca tgtccggagt cttcctgctc ctctgcgcct ccatgctggc 61 ctgcaccgcc gcctttgaca taggattatc caccaagtgc gtcaccattc ccacagagat 121 ggccatgtgc aatgacgtcg gctactcgga gatgcggctg ccaaacctga tgggacacac 181 taacatggca gaagtcgtgc ccaagtcagc agagtggcag aacctcctac aaaccggctg 241 ccacccctat gccaggacct tcctgtgctc cctgttcgcc ccagtctgcc tggacacgtt 301 catccagccc tgccgtagta tgtgtgtagc tgtaagagac agttgtgctc cagttctggc 361 atgtcatggg cactcctggc ctgaaagctt agactgtgac aggttcccag ctggggaaga 421 catgtgcttg gacactctca gcaaagagta tcagtactcc tataaagaat tgcctaagcc 481 aagttgccag ggctgcccgc tgattgaaga attcttctca cacaagacag tcttggaagc 541 tttctgtgac aataattttg ctgttaaagt gaaattggca aagaagaaat cagcttcagg 601 actttatgaa tatgagactg aaggcccagt tgagttcatt aaacaaggtc tgctccttcc 661 atatgacaca cgtaccatga ttgaacagtg gctgctgatt aatgagaatt gtgctcagaa 721 gctgatacgg accagaccca cagtgtatgt tattgctggt gagatccatc atggcaaggt 781 taaagtcaac agaatattcc actggcaaaa aaaggactct cagctgacac tggccacaag 841 gaggtggaga catcataaat gttaatacaa ctcttgtaca ttgtttgtaa ataatcaagg 901 cactattttt aaacaaactg taaatattta gtttatatat atatatatat attgtaaaat 961 agaaagacct attataacag ctggattgaa cgcatcccat t //