LOCUS BC168499 1843 bp mRNA linear VRT 23-AUG-2008 DEFINITION Danio rerio glutamate-ammonia ligase (glutamine synthase) b, mRNA (cDNA clone MGC:174790 IMAGE:7177304), complete cds. ACCESSION BC168499 VERSION BC168499.1 KEYWORDS MGC. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE 1 (bases 1 to 1843) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1843) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-AUG-2008) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Genome Institute of Singapore cDNA Library Preparation: S. Mathavan, Chia-Lin Wei, and Yijun Ruan, Genome Institute of Singapore cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 73 Row: p Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 44890315. FEATURES Location/Qualifiers source 1..1843 /organism="Danio rerio" /mol_type="mRNA" /strain="Singapore local strain" /db_xref="taxon:7955" /clone="MGC:174790 IMAGE:7177304" /tissue_type="Embryo, 7 different stages (from just fertilized embryos to 72 hours just hatched baby fish)" /clone_lib="GISZF001_ma" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1843 /gene="glulb" /gene_synonym="fb11d08" /gene_synonym="gso2" /gene_synonym="hm:zehn1949" /gene_synonym="im:7153900" /gene_synonym="wu:fb11d08" /db_xref="GeneID:336473" /db_xref="ZFIN:ZDB-GENE-030131-8417" CDS 122..1240 /gene="glulb" /gene_synonym="fb11d08" /gene_synonym="gso2" /gene_synonym="hm:zehn1949" /gene_synonym="im:7153900" /gene_synonym="wu:fb11d08" /codon_start=1 /product="glutamate-ammonia ligase (glutamine synthase) b" /protein_id="AAI68499.1" /db_xref="GeneID:336473" /db_xref="ZFIN:ZDB-GENE-030131-8417" /translation="MATSASSKLSKAMKQQYMDLPQGEKVQVMYIWIDGTGEGLRCKT RTLDSEPKSVEELPEWNFDGSSTYQAEGSNSDMYLFPQAMFRDPFRKDPNKLVLCDVL KYNHKPAETNLRQSCKKIMDMVQNQHPWFGMEQEYTLLGTDGHPFGWPSNGFPGPQGP YYCGVGADKAYGRDVVEAHYRACLYAGVKICGTNAEVMPAQWEFQVGPCEGIEMGDHL WVARFLLHRVCEDFGVVASFDPKPIPGNWNGAGCHTNFSTKEMREEGGLKHIEESIEK LGKRHQYHIRAYDPKGGLDNARRLTGHHETSNINEFSAGVANRGASIRIPRSVGQEKK GYFEDRRPSANCDPYAVTEALIRTCLLNEEGEVPEKYM" BASE COUNT 548 a 377 c 404 g 514 t ORIGIN 1 gttatgagga tgagagacaa acagccagga ctaccctata aaaccctctg gaaatacagc 61 cactcttata gtgactattt gtactttttg ataggtttga tatagcatca ctagcaccac 121 catggccact tcagccagtt ccaaattaag caaagctatg aaacagcagt acatggatct 181 ccctcaggga gaaaaagttc aggtcatgta catctggatt gatggaaccg gagagggatt 241 gagatgcaaa accaggactc tagactctga acctaaatct gttgaagaac ttcctgagtg 301 gaactttgat ggttccagca catatcaggc tgaggggtcc aacagtgaca tgtatttgtt 361 ccctcaagcc atgttcagag accctttcag gaaagacccc aacaaactgg ttctgtgcga 421 tgttctgaaa tacaaccata aacctgcaga aaccaatctt cgtcagtcct gtaagaagat 481 tatggatatg gtccagaacc agcatccttg gtttggaatg gaacaggagt acactcttct 541 cggcacagat ggtcatcctt tcggttggcc ctccaatggc ttccctggac ctcaaggtcc 601 atattactgt ggtgttggag ctgataaggc ctatggacga gatgttgtag aagcacatta 661 tagagcctgt ctgtatgctg gggtaaaaat ctgtggcacc aatgctgaag tcatgcctgc 721 acagtgggag ttccaagttg gcccttgtga ggggatcgag atgggagacc atctgtgggt 781 cgcccgcttc ctcctacaca gggtttgtga ggactttggt gttgtggcct cttttgaccc 841 caagcctatt ccaggtaact ggaatggagc cggctgccac accaacttca gcaccaagga 901 gatgcgcgag gaaggaggtt tgaagcatat tgaggagtcg attgagaagc ttggcaagag 961 acaccagtac catatccgtg cctacgatcc taaaggaggg ctggacaatg ccagacgtct 1021 gactggccat cacgagacct ctaacattaa cgagttttcg gctggagtgg ccaaccgtgg 1081 tgctagcata cgaattccac gatctgtggg tcaggaaaag aagggctatt tcgaagaccg 1141 ccgtccttca gccaactgtg atccatacgc agtcactgaa gctcttatac gcacatgtct 1201 gctcaacgaa gagggtgaag tgccagagaa atacatgtga aagactggac tgaagcatta 1261 ttttaataac aaaatctatc tacagactcc ttgtattttg aattcattag ctgtctaaaa 1321 tgaggtatga cagtagatgg atctttactc cttttgttgg ttgtagaaac gcacattggg 1381 tcagtttatc ctacaatttt agctttttca ctgtcggttt ctttttgtga taagcttcgt 1441 aatgataccc gatccggtca aatgtctgat agagatggac atttgcaccc atcattacta 1501 ctacttggcc tttatacctg aagctgttca gtgtattgac ttgtttttaa tgtcattcaa 1561 ttttaacttc tttttttata tatatataaa ctaattgtag atattttaat gcatatcata 1621 gtcagtttta gacttttcac gggttataaa ttatggcact atttctcaca aggaccaaaa 1681 tacattgtac ttgtatggcg ctgactgttg ctcaaagggt tatttcattt ttgcagttcc 1741 aggtttcaga aaacactatt aacttgtctt attaaaagaa ttttattaaa aaaaaaaaaa 1801 aaaaaaaaaa aaaaaccaaa aaaaaaaaaa aaaaaaaaaa aaa //