LOCUS BC138911 2546 bp mRNA linear ROD 12-MAY-2008 DEFINITION Mus musculus RIKEN cDNA 1110049B09 gene, mRNA (cDNA clone MGC:170538 IMAGE:8861933), complete cds. ACCESSION BC138911 VERSION BC138911.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2546) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2546) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Ambion cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 668 Row: i Column: 3. FEATURES Location/Qualifiers source 1..2546 /organism="Mus musculus" /mol_type="mRNA" /db_xref="taxon:10090" /clone="MGC:170538 IMAGE:8861933" /tissue_type="Brain, PCR rescued clones" /clone_lib="NIH_MGC_377" /lab_host="DH10B" /note="Vector: pCR4-TOPO; Clone identification sequence tag: GTTCCTCA" gene 1..2546 /gene="1110049B09Rik" /db_xref="GeneID:68764" /db_xref="MGI:MGI:1916014" CDS 30..2525 /gene="1110049B09Rik" /codon_start=1 /product="RIKEN cDNA 1110049B09 gene" /protein_id="AAI38912.1" /db_xref="GeneID:68764" /db_xref="MGI:MGI:1916014" /translation="MQGAVIVLVLFGITSGGEALHLLHLPATSNVAENAPPATLVHKF SVNLSVSLSPVIPGFPLVVNPRPFTEAFRVNRLSATNFEVVTTGKEQLDFERGPKAFD LQIYVKDDVGVTDVQVLTVQVTDVNEPPQFQGILAQGLNLYVIERTNPGFIYQVEAFD PEDTSRSIPLGYFLISPSKNFRMSANGTLFSTTELDFEAGHKSFNLLVGVRDSGNLEA STALQVTIVNINDETPRFTSPRRVYSVPEEVPLGTMVANITAMDPDDEGFPGRLLYSI TTTSSYFMVDQLTGTIQVARRLDRDAGELRQNPIISLEVRVRDRPSGGQENRMQITFI VEDINDNPATCRKLTFSIMLPERTANGTLLLDLNKFCFDDDSEAPNNKFNFTTPSGAG SSRRFSQHPAGSGRIVLTGDLDYENPSNLAVGNVYNVMIQVQDAAPPYYKKSIYISIL TRPENEFPLIFERPSYVFDVPERRPARTQIGQVRATDADFPRTPVVYSVSRGGSSLQY PNIFWINPKTGELQLITQADHETTSVYILTVEATNGEDRSSVTVTVNILGENDEKPVC TPNFYFMAIPVDLKVGTNIQNFKLTCTDLDSSPSSFRYSIGSGNINNHFTFSPNAGSN ITRLLLASRFDYSSLDTVWDYQLLVHITDDNLLSGSTKAKALVETGTVTLSVKVIPHP TTTITTPRPRITYQIRRENVYSTSAWYVPFIVTLGSILLLGLLGSLMVLLSKAVYRHC SSTTRRDRKPLTKKRDTKRMNREAMVESIQMNSVFDGEAVDPVTGEIYEFNSKTGARR WKGPLTQLPNWPEPSTQHRGTAGEAPVPKHTGR" BASE COUNT 706 a 682 c 590 g 568 t ORIGIN 1 gtggccgtac acacagggag ccatccagca tgcagggggc agtcattgtc cttgttctct 61 ttgggatcac ctcaggaggg gaagctctac acctgctcca cctgcctgcc actagcaacg 121 tggcagagaa cgctccacct gccactttgg tgcacaagtt ttctgtgaat ttatcagtat 181 cgttgtcacc tgtgatccca gggtttccct tggtagtcaa cccaaggccc ttcacggagg 241 ccttcagggt gaacagactg tcagcaacca actttgaggt ggtcaccacc gggaaagaac 301 aactagattt tgaaagagga ccgaaagcat tcgatttgca gatttacgtt aaggatgatg 361 tcggtgtcac agatgtgcaa gtcctgactg ttcaggtgac agatgtgaac gagcctcctc 421 agttccaagg catcctggca caaggtttaa acctctatgt catagaaaga acaaaccctg 481 gattcattta ccaggtggag gcatttgacc cagaagacac aagccggagc atacccctcg 541 ggtatttcct catttctccc tcgaagaact tcagaatgtc tgcaaatggc accctcttct 601 ctaccacaga actggacttt gaagcagggc acaagagctt caacctcctt gtgggagtaa 661 gagacagtgg gaacctcgaa gcctccacag ctctccaggt gactattgtg aacattaatg 721 atgagacccc gcgctttacc agccccagga gagtgtactc tgtcccagaa gaagtgcctc 781 taggaaccat ggtggcgaac atcacagcaa tggatcctga tgatgagggt tttcctggcc 841 gcctcctcta cagcatcact accaccagca gctatttcat ggtagaccag ctgacaggga 901 caatccaagt ggcccgaagg ctagatcgag atgcaggcga actgagacag aatcccatca 961 tttctctgga agttcgagtg agagacaggc cctctggggg tcaggagaac cgcatgcaga 1021 taaccttcat tgtggaagac atcaatgaca accctgcaac atgcagaaag ctcactttca 1081 gcattatgtt gcctgaaaga acagccaacg ggacgttgct tttggacctg aacaagttct 1141 gctttgatga tgacagcgaa gctccaaaca acaaattcaa ctttaccacg ccatctggag 1201 cggggagcag ccgcagattt tcacagcatc cagctggctc tgggagaatt gtgttgactg 1261 gtgatctaga ctatgaaaat ccaagcaacc ttgcagttgg caatgtgtac aatgtgatga 1321 tccaagtgca ggatgctgct cctccatact acaaaaaaag catctacatc tctatcctaa 1381 caaggccaga aaatgaattt cctctcatct ttgaaaggcc atcgtacgtg tttgatgtgc 1441 cagaaagaag accagctaga acccagattg ggcaggtgcg agctaccgat gcagacttcc 1501 cccggactcc agtggtgtat tccgtatcca gaggagggtc cagcctccag tacccaaaca 1561 tattttggat taaccccaag acaggagaac tccaactaat aactcaagca gaccatgaaa 1621 ccacttctgt ctacattctc accgtcgagg ccaccaacgg cgaggacagg agctcagtca 1681 ctgttactgt gaacatcctt ggagaaaatg atgaaaagcc agtatgtact ccaaattttt 1741 acttcatggc catcccagtg gatctaaaag ttggcacaaa cattcagaat ttcaagctga 1801 cgtgcactga ccttgattct agccccagtt cttttcgata ctccattggc tcaggcaaca 1861 tcaacaatca tttcaccttc tctcccaatg ccggctccaa catcacgcgc ctgctgctgg 1921 cttcccgctt tgactacagc agcctcgata ccgtctggga ctaccagctg cttgtccaca 1981 ttactgatga caacttgctg tctggcagca caaaagccaa ggctcttgtt gaaacaggga 2041 cagtgactct gagtgttaaa gtcattcctc acccaaccac aaccatcaca actcccaggc 2101 ccaggattac ctaccagatc cgcagggaaa acgtgtactc cacatctgca tggtatgtgc 2161 cgttcatcgt cactctggga tccatacttc ttcttggcct tctggggtcc ctgatggtgc 2221 tgctgtccaa agcagtctac agacattgct cctctacgac caggagggac aggaaacctc 2281 tgacaaagaa aagagacaca aaaagaatga atagagaggc catggtggaa tctatccaga 2341 tgaactctgt ctttgatgga gaagccgtag atccagtgac cggggaaata tatgaattca 2401 actcaaaaac tggtgccagg aggtggaaag gcccattaac ccagctgccg aattggcccg 2461 agcccagtac ccagcacaga ggcacagctg gagaagcacc agtccctaaa cacacaggga 2521 gataacaggc atctcccaga ggcaac //