LOCUS BC138682 3957 bp mRNA linear ROD 12-MAY-2008 DEFINITION Mus musculus RAS protein-specific guanine nucleotide-releasing factor 1, mRNA (cDNA clone MGC:170308 IMAGE:8861703), complete cds. ACCESSION BC138682 VERSION BC138682.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3957) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3957) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Ambion cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 667 Row: o Column: 13. FEATURES Location/Qualifiers source 1..3957 /organism="Mus musculus" /mol_type="mRNA" /db_xref="taxon:10090" /clone="MGC:170308 IMAGE:8861703" /tissue_type="Brain, PCR rescued clones" /clone_lib="NIH_MGC_377" /lab_host="DH10B" /note="Vector: pCR4-TOPO; Clone identification sequence tag: AGCAGATG" gene 1..3957 /gene="Rasgrf1" /gene_synonym="CDC25" /gene_synonym="CDC25Mm" /gene_synonym="Grfbeta" /gene_synonym="p190" /gene_synonym="P190-A" /gene_synonym="p190RhoGEF" /gene_synonym="Ras-GRF1" /db_xref="GeneID:19417" /db_xref="MGI:MGI:99694" CDS 60..3848 /gene="Rasgrf1" /gene_synonym="CDC25" /gene_synonym="CDC25Mm" /gene_synonym="Grfbeta" /gene_synonym="p190" /gene_synonym="P190-A" /gene_synonym="p190RhoGEF" /gene_synonym="Ras-GRF1" /codon_start=1 /product="RAS protein-specific guanine nucleotide-releasing factor 1" /protein_id="AAI38683.1" /db_xref="GeneID:19417" /db_xref="MGI:MGI:99694" /translation="MQKAIRLNDGHVVTLGLLAQKDGTRKGYLSKRSADNPKWQTKWF ALLQNLLFYFESDSSPRPSGLYLLEGSICKRAPSPKRGTSSKESGEKQQHYFTVNFSN DSQKTLELRTEDAKDCDEWVAAIARASYKILATEHEALMQKYLHLLQVVETEKTVAKQ LRQQLEDGEVEIERLKTEVTITNLIKDNDRIQSSNKAGSADDEDSDIKKIKKVQSFLR GWLCRRKWKNIIQDYIRSPHADSMRKRNQVVFSMLEAEAEYVQQLHILVNNFLRPLRM AASSKKPPITHDDVSSIFLNSETIMFLHQIFYQGLKARISSWPTLVLADLFDILLPML NIYQEFVRNHQYSLQILAHCKQNRDFDKLLKQYEAKPDCEERTLETFLTYPMFQIPRY ILTLHELLAHTPHEHVERNSLDYAKSKLEELSRIMHDEVSETENIRKNLAIERMITEG CEILLDTSQTFVRQGSLMQMSLSEKSKSSRGRLGSLSTKKEGERQCFLFSKHLIICTR GSGGKLHLTKNGVISLIDCTLLDEPENLDDEAKGAGPEIEHLEFKIGVEPKDSLPFTV ILVASTRQEKAAWTSDIIQCVDNIRCNGLMMNAFEENSKVTVPQMIKSDASLYCDDVD IRFSKTMNSCKVLQIRYASVERLLERLTDLRFLSIDFLNTFLHSYRVFTNAMVVLDKL INIYRKPMSAIPARSLELLFSSSHNAKLLYGDAPKSPRASRKFSSPPPLAIGTSSPSR RRKLSLNIPIITGGKALELASLGCSSDSYANIHSPISPFGKTTLDTGKLCMASSLPKT PEEIDVPATIPEKPGELSASRKHSSDVLKEESEDDQNHSDEDNTEVSPVKSPPTPKSF LNRTITEFPFFNYNNGILMTTCRDLVDNNRSTLSATSAFAIATAGANEGPSNKEVFRR MSLANTGFSSDQRNIDKEFVIRRAATNRVLNVLRHWVTKHTQDFDTDDTLKYRVICFL EEVMHDPDLLTQERKAAANIIRTLTLEETTEQHSMLEEVILMTEGVKTEPFENHPALE IAEQLTLLDHLVFKSIPYEEFFGQGWMKAEKYERTPYIMKTTKHFNHVSNFIASEIIR NEDISARASAIEKWVAVADICRCLHNYNAVLEITSSINRSAIFRLKKTWLKVSKQTKS LLDKLQKLVSSDGRFKNLRESLRNCDPPCVPYLGMYLTDLVFIEEGTPNYTEDGLVNF SKMRMISHIIREIRQFQQTTYKIDPQPKVIQYLLDESFMLDEESLYESSLLIEPKLPT " BASE COUNT 1047 a 1135 c 952 g 823 t ORIGIN 1 gcattcggat gcctctctga gatgtaagtg cgtagcagtc tctcaggcct tctagcatca 61 tgcagaaagc catccggctt aacgatggcc acgtcgtgac cctgggactg ctggcacaga 121 aggacggcac gcgcaaaggc tacctgagca agaggagtgc ggacaaccca aaatggcaaa 181 ccaagtggtt tgccctgctc cagaacctgc ttttctactt cgaaagcgac tccagccctc 241 ggccctcggg gctctacctg ctcgagggaa gtatctgtaa acgcgcgccc tcccccaagc 301 gagggacctc ctccaaggag tccggcgaga aacagcaaca ttacttcaca gtgaacttct 361 ccaatgacag ccagaagacc ttggagttga ggaccgagga tgccaaggac tgtgacgagt 421 gggtggctgc gatcgctcgc gccagctaca agatactggc tacagaacat gaggcgctta 481 tgcagaagta cttacacctg ctgcaggtag tggagacaga gaagactgtg gctaagcagc 541 tgcgccagca gcttgaggac ggtgaggttg agatcgagcg cctgaagacg gaggtaacta 601 ttacaaacct gatcaaggac aatgatcgta tccaatccag caacaaagcc ggttctgctg 661 atgatgagga cagtgacatc aagaaaatta agaaggttca gagcttcctt cggggatggc 721 tgtgccggcg aaagtggaag aacatcatcc aggactacat ccggtctccc cacgcggaca 781 gcatgcgcaa gaggaaccag gtggtgttca gcatgctgga ggccgaggct gagtacgtcc 841 agcagctaca catccttgtc aacaacttcc tgcgcccact gcgcatggcc gccagctcta 901 agaaaccccc tataacacac gacgacgtca gcagtatctt tctgaacagc gagaccatca 961 tgttcctgca tcagatcttc taccaaggcc tgaaggcccg tatctccagc tggcccaccc 1021 tggtgctggc ggacctgttc gatatcctgc tgcccatgct gaacatctac caggagttcg 1081 tccgcaacca ccagtacagc ctccagatcc ttgctcactg caagcaaaac cgggactttg 1141 acaagctcct caagcagtac gaggccaagc cagactgcga ggagcgcaca ctggagacct 1201 tcctcaccta cccaatgttc cagatcccca ggtacatcct gacactccat gagctgctgg 1261 cccacacacc tcatgagcat gtggagcgca acagcctgga ctatgccaaa tccaaactag 1321 aggaactgtc caggatcatg catgacgaag tcagtgaaac cgagaacatc cgcaaaaacc 1381 tggccattga gcgtatgatc acggagggct gtgagatcct cctggacacc agccagacct 1441 tcgtgcgcca aggttccctc atgcagatgt ccttgtctga aaagagcaag tcctctaggg 1501 gccgcctggg gtctctgtcc actaagaaag agggtgagcg ccagtgtttc ctattctcca 1561 agcatctcat tatctgcacc agaggctctg gtgggaaact gcacctaacc aagaatggag 1621 tcatatccct cattgactgc accttactgg atgaacccga aaacctggac gacgaagcca 1681 aaggagccgg accagagata gaacacctgg agtttaagat cggggtggag ccaaaggact 1741 ccctaccctt cactgtcatc ctggtagcct caaccaggca ggagaaggca gcatggacca 1801 gtgacatcat ccagtgcgtg gataatatcc gctgcaatgg gctcatgatg aatgcctttg 1861 aagaaaattc caaggtcacc gtgcctcaga tgatcaagtc tgacgcttcc ttatattgtg 1921 atgatgttga cattcgcttc agcaaaacca tgaattcttg caaagtgctt cagattcgct 1981 atgccagcgt ggagcgcctg ctggagcgcc tgactgatct tcgcttcctg agcattgact 2041 ttctcaacac cttcctgcat tcctaccgcg tcttcaccaa tgctatggtg gtcctggaca 2101 agctgatcaa tatctacaga aaacccatga gtgcgattcc tgccaggtcc ctggaactct 2161 tgttttccag cagccacaac gccaagcttc tgtacggaga tgcccctaag tcccctcgcg 2221 ccagccgcaa gttctcctcg ccaccgccct tggccatcgg gacgtcatcc cccagccgcc 2281 gtcggaagct gtccctcaac atccccatca tcacaggcgg caaggcgctg gaactggctt 2341 cccttgggtg cagctccgat agctacgcca acatacactc acccatatct cccttcggca 2401 aaaccacact ggacactggc aagctctgta tggccagcag cttacccaag actccagagg 2461 agattgatgt gcctgccacg attccagaga agcctgggga gctctcagcc tccaggaagc 2521 atagctctga cgtcctgaaa gaagagtccg aggatgacca gaaccacagt gatgaagaca 2581 acacagaagt gtcaccagtt aaatccccac caacaccaaa atcgttctta aacagaacca 2641 ttacagagtt tccattcttt aactacaaca atggaatcct gatgaccacg tgtcgtgatc 2701 tggtggacaa taaccgcagc actctctcag ctacttctgc ctttgccata gcgactgcag 2761 gagccaatga aggcccctca aacaaggagg tgtttcgaag gatgtctttg gccaacacag 2821 gcttttcctc tgaccagaga aatatcgaca aggagtttgt gatccgcaga gctgccacca 2881 atcgtgtgct gaatgtgctc cgccactggg tcaccaagca cacccaggac tttgataccg 2941 acgatacgct caaatacagg gtgatctgct tcctggagga ggtcatgcat gacccagacc 3001 ttctgaccca agagcgaaag gcagcagcca acatcatcag gactctgacc ctagaagaaa 3061 caactgaaca acatagcatg ctggaagaag tcatactgat gacggagggt gtgaagactg 3121 agcccttcga aaaccaccca gccctggaga tagcagagca gctgaccctg ctggatcacc 3181 ttgtcttcaa gagtattcct tatgaagagt tctttggcca gggctggatg aaggccgaga 3241 agtatgaaag gacaccttac attatgaaaa ccaccaaaca cttcaaccat gtcagtaact 3301 tcattgcttc agaaattatc cgaaacgagg acatcagcgc aagggcaagc gccatcgaga 3361 agtgggtggc tgtggccgac atatgtcgct gcctgcacaa ctacaatgct gtgctggaga 3421 tcacctcctc catcaaccgc agcgccatct tccgtctcaa aaagacatgg ctcaaagttt 3481 ctaagcagac gaaatctttg cttgacaagc tccaaaagct tgtgtcatca gatggcagat 3541 ttaagaacct cagagagtct ttgagaaatt gtgatccacc ctgtgtccct tacctgggga 3601 tgtatctcac cgacttggtg ttcatcgagg aggggacacc caattacaca gaggacggcc 3661 tggtcaactt ctccaagatg agaatgatct cccatattat ccgagagatt cgccagtttc 3721 agcagactac ctacaaaatc gacccccagc caaaggtaat tcagtactta ctggatgaat 3781 ctttcatgtt ggacgaagaa agcctgtatg agtcttcgct cctaatcgaa ccaaaactcc 3841 ccacatgagg ctgttctccc cacccactgg caccgcagcg taacgccagc tgccccccag 3901 ctgcttctgt gaacacctgc tttacgatta ttgtatataa tcgtcgcgtg cctctgt //